@tangle-network/agent-bench 0.11.2 → 0.11.3

package/CHANGELOG.md

@@ -1,5 +1,11 @@
 # Changelog
 
+## 0.11.3
+
+Uses Runtime 0.209.0, Eval 0.180.0, and Knowledge 15.0.3 together, including named resource accounting and source-attributed resource reports.
+SWE-bench setup, prompts, and patch extraction use the writable session workspace instead of a root-level directory.
+Official grading behavior is unchanged.
+
 ## 0.11.2
 
 Supports SWE-bench 5.x by detecting removed cache and namespace evaluator flags while retaining the 4.x path.

package/dist/benchmarks/swe-bench.js

@@ -14,13 +14,8 @@ import { join } from "node:path";
 * SWE-specific pieces: the patch OutputAdapter, the dataset dump, and the
 * predictions-file → run_evaluation argv → report-shape mapping.
 */
-/**
-* Fixed in-box path the agent clones the instance repo into. It is the SINGLE
-* source of truth shared by the prompt template (which tells the agent to clone
-* here) and `boxExtract` (which runs `git diff` here after the shot) — so the
-* harness always knows exactly where the agent's edits live, for any instance.
-*/
-const SWE_REPO_DIR = "/work";
+/** Root-level directories are not writable in every sandbox; use the session workspace. */
+const SWE_REPO_DIR = "./swe-bench-repo";
 /**
 * The SWE deliverable's FALLBACK parser, from the agent's event STREAM.
 *
@@ -189,10 +184,10 @@ print(json.dumps(out))
 				prompt: [
 					`Repository: ${r.repo} @ ${r.base_commit}`,
 					"",
-					`The repository is ALREADY cloned at ${SWE_REPO_DIR}, checked out at commit ${r.base_commit}. Work there directly (\`cd ${SWE_REPO_DIR}\`); do not re-clone.`,
+					`The repository is ALREADY cloned at ${SWE_REPO_DIR} relative to your initial session workspace, checked out at commit ${r.base_commit}. Work there directly (\`cd ${SWE_REPO_DIR}\`); do not re-clone.`,
 					"",
 					"Resolve this issue by editing the repository SOURCE so the failing tests pass without breaking the passing ones. Do NOT edit test files — the evaluation runs hidden tests on a fresh checkout, so editing tests does not count. Keep the change minimal and confined to the cloned repo.",
-					"Work iteratively: reproduce the issue, implement the fix in the source, and re-run the relevant tests until they pass. You do NOT need to print the diff — the harness reads your committed edits directly from the repo.",
+					"Work iteratively: reproduce the issue, implement the fix in the source, and re-run the relevant tests until they pass. You do NOT need to print the diff — the harness reads your source edits directly from the repo, including uncommitted changes.",
 					"",
 					"--- Issue ---",
 					String(r.problem_statement ?? "")

package/dist/benchmarks/swe-bench.js.map

@@ -1 +1 @@
-{"version":3,"file":"swe-bench.js","names":[],"sources":["../../src/benchmarks/swe-bench.ts"],"sourcesContent":["/**\n * SWE-bench Verified adapter. Worker artifact = a unified-diff patch. Judge =\n * the official `swebench` harness: apply the patch in the instance's Docker\n * image, run FAIL_TO_PASS + PASS_TO_PASS, report `resolved`. Fully deterministic\n * — no LLM judge.\n *\n * Requires: the bench `.venv` with `swebench` installed + a running Docker\n * daemon (per-instance images are pulled/built on first run).\n *\n * Process/Docker/report plumbing is shared via ./_harness; this file owns the\n * SWE-specific pieces: the patch OutputAdapter, the dataset dump, and the\n * predictions-file → run_evaluation argv → report-shape mapping.\n */\n\nimport { join } from 'node:path'\nimport type { OutputAdapter } from '@tangle-network/agent-runtime/kernel'\nimport {\n  preflightVenvImports,\n  readJsonReport,\n  runStagedJudge,\n  runVenvPython,\n  safeRunId,\n  stageFile,\n  type StagedRunCaptureSpec,\n} from './_harness'\nimport type { BenchmarkAdapter, BenchScore, BenchTask, LoadOptions } from './types'\n\n/**\n * Fixed in-box path the agent clones the instance repo into. It is the SINGLE\n * source of truth shared by the prompt template (which tells the agent to clone\n * here) and `boxExtract` (which runs `git diff` here after the shot) — so the\n * harness always knows exactly where the agent's edits live, for any instance.\n */\nconst SWE_REPO_DIR = '/work'\n\n/**\n * The SWE deliverable's FALLBACK parser, from the agent's event STREAM.\n *\n * The PRIMARY deliverable is `boxExtract` below: a `git diff` of the agent's\n * actual edits, read from the cloned repo's STATE inside the box (standard\n * SWE-bench practice). This event-stream parse only runs when that diff is empty\n * — a model that edited the source correctly but never printed a fenced diff (the\n * exact failure this replaces) still scores off its real changes, not its prose.\n */\nexport const swePatchOutput: OutputAdapter<string> = {\n  parse(events) {\n    let text = ''\n    for (const ev of events) {\n      const d = (ev as { data?: Record<string, unknown> })?.data\n      const t = d?.finalText ?? d?.text ?? d?.result\n      if (typeof t === 'string' && t.length > 0) text = t\n    }\n    // Last ```diff/```patch fenced block (the contract the prompt asks for);\n    // fall back to the raw text so a fence-less but valid diff still reaches the judge.\n    const fences = [...text.matchAll(/```(?:diff|patch)?\\s*\\n([\\s\\S]*?)```/g)]\n    const last = fences.at(-1)?.[1]\n    return (last ?? text).trim()\n  },\n}\n\nconst DATASET = 'princeton-nlp/SWE-bench_Verified'\nexport type SweBenchCacheLevel = 'none' | 'base' | 'env' | 'instance'\n\nexport interface SweBenchArtifactCaptureContext {\n  readonly taskId: string\n  readonly runId: string\n  /** One-based sequence unique within this adapter instance. */\n  readonly attemptSequence: number\n}\n\nexport interface SweBenchAdapterOptions {\n  readonly timeoutMs?: number\n  readonly cacheLevel?: SweBenchCacheLevel\n  /**\n   * Return a unique destination for any attempt whose complete official\n   * evaluator directory and process logs should be retained.\n   */\n  readonly captureEvaluatorArtifacts?: (\n    context: SweBenchArtifactCaptureContext,\n  ) => StagedRunCaptureSpec | undefined\n}\n\nconst SWE_CACHE_LEVELS = new Set<SweBenchCacheLevel>(['none', 'base', 'env', 'instance'])\n\nfunction scorerNamespace(): 'swebench' | 'none' {\n  const namespace = process.env.SWEBENCH_NAMESPACE ?? 'swebench'\n  if (namespace !== 'swebench' && namespace !== 'none') {\n    throw new Error(`SWEBENCH_NAMESPACE must be swebench|none, got \"${namespace}\"`)\n  }\n  return namespace\n}\nconst TEST_FILE_EXCLUDES = [\n  \"':(exclude,glob)**/tests/**'\",\n  \"':(exclude,glob)**/test/**'\",\n  \"':(exclude,glob)test_*.py'\",\n  \"':(exclude,glob)**/test_*.py'\",\n  \"':(exclude,glob)*_test.py'\",\n  \"':(exclude,glob)**/*_test.py'\",\n  \"':(exclude,glob)conftest.py'\",\n  \"':(exclude,glob)**/conftest.py'\",\n].join(' ')\n\ninterface SweReport {\n  resolved_instances?: number\n  resolved_ids?: string[]\n  unresolved_ids?: string[]\n  empty_patch_ids?: string[]\n  completed_ids?: string[]\n  incomplete_ids?: string[]\n  error_ids?: string[]\n  submitted_ids?: string[]\n}\n\nfunction stringIds(report: Record<string, unknown>, key: keyof SweReport): string[] {\n  const value = report[key]\n  if (value === undefined) return []\n  if (!Array.isArray(value) || value.some((entry) => typeof entry !== 'string')) {\n    throw new Error(`swe-bench: malformed ${key}`)\n  }\n  return value\n}\n\n/** Convert one official report into a score without turning evaluator failures into agent failures. */\nexport function scoreSweReport(taskId: string, value: unknown): BenchScore {\n  if (!value || typeof value !== 'object' || Array.isArray(value)) {\n    throw new Error('swe-bench: report must be an object')\n  }\n  const report = value as Record<string, unknown>\n  const statusIds = {\n    resolved: stringIds(report, 'resolved_ids'),\n    unresolved: stringIds(report, 'unresolved_ids'),\n    emptyPatch: stringIds(report, 'empty_patch_ids'),\n    completed: stringIds(report, 'completed_ids'),\n    incomplete: stringIds(report, 'incomplete_ids'),\n    error: stringIds(report, 'error_ids'),\n  }\n  const submitted = stringIds(report, 'submitted_ids')\n  const mentioned = Object.values(statusIds).flat()\n  if (\n    mentioned.some((id) => id !== taskId)\n    || (submitted.length > 0 && (submitted.length !== 1 || submitted[0] !== taskId))\n  ) {\n    throw new Error(`swe-bench: report identity mismatch for ${taskId}`)\n  }\n  if (statusIds.error.includes(taskId) || statusIds.incomplete.includes(taskId)) {\n    throw new Error(`swe-bench: evaluator failed for ${taskId}`)\n  }\n  const outcomes = [\n    statusIds.resolved.includes(taskId),\n    statusIds.unresolved.includes(taskId),\n    statusIds.emptyPatch.includes(taskId),\n  ]\n  if (outcomes.filter(Boolean).length !== 1) {\n    throw new Error(`swe-bench: report has no unique outcome for ${taskId}`)\n  }\n  if ((outcomes[0] || outcomes[1]) && !statusIds.completed.includes(taskId)) {\n    throw new Error(`swe-bench: report lacks a completed evaluation for ${taskId}`)\n  }\n  const resolved = outcomes[0]\n  return { resolved, score: resolved ? 1 : 0, detail: JSON.stringify(report) }\n}\n\nexport function sweEvaluationArgv(args: {\n  readonly predictionsPath: string\n  readonly runId: string\n  readonly instanceId: string\n  readonly cacheLevel: SweBenchCacheLevel\n  readonly namespace?: 'swebench' | 'none'\n}): string[] {\n  return sweEvaluationArgvForHarness(args, true)\n}\n\nfunction sweEvaluationArgvForHarness(args: {\n  readonly predictionsPath: string\n  readonly runId: string\n  readonly instanceId: string\n  readonly cacheLevel: SweBenchCacheLevel\n  readonly namespace?: 'swebench' | 'none'\n}, legacyFlags: boolean): string[] {\n  const common = [\n    '-m', 'swebench.harness.run_evaluation',\n    '--dataset_name', DATASET,\n    '--predictions_path', args.predictionsPath,\n    '--run_id', args.runId,\n    '--instance_ids', args.instanceId,\n    '--max_workers', '1',\n  ]\n  if (!legacyFlags) return common\n  return [...common, '--namespace', args.namespace ?? scorerNamespace(), '--cache_level', args.cacheLevel]\n}\n\nfunction shellQuote(value: string): string {\n  return `'${value.replace(/'/g, `'\\\\''`)}'`\n}\n\nfunction sweMetadata(task: BenchTask): { repo: string; base: string } {\n  const repo = String(task.metadata?.repo ?? '')\n  const base = String(task.metadata?.base_commit ?? '')\n  if (!/^[A-Za-z0-9_.-]+\\/[A-Za-z0-9_.-]+$/.test(repo)) {\n    throw new Error(`swe-bench: invalid repo metadata for ${task.id}: ${repo}`)\n  }\n  if (!/^[0-9a-f]{7,40}$/i.test(base)) {\n    throw new Error(`swe-bench: invalid base_commit metadata for ${task.id}: ${base}`)\n  }\n  return { repo, base }\n}\n\nexport function createSweBenchAdapter(options: SweBenchAdapterOptions = {}): BenchmarkAdapter {\n  if (\n    options.timeoutMs !== undefined\n    && (!Number.isSafeInteger(options.timeoutMs) || options.timeoutMs <= 0)\n  ) throw new Error('swe-bench: timeoutMs must be a positive integer')\n  const cacheLevel = options.cacheLevel ?? 'env'\n  if (!SWE_CACHE_LEVELS.has(cacheLevel)) throw new Error('swe-bench: invalid cacheLevel')\n  if (\n    options.captureEvaluatorArtifacts !== undefined\n    && typeof options.captureEvaluatorArtifacts !== 'function'\n  ) throw new Error('swe-bench: captureEvaluatorArtifacts must be a function')\n  let attemptSequence = 0\n  let legacyFlags: boolean | undefined\n  return {\n    name: 'swe-bench-verified',\n    output: swePatchOutput,\n\n    // Extract the patch from repo STATE, not printed text: stage every edit the\n    // agent made in the cloned repo and diff it against the checked-out\n    // base_commit (`HEAD`). Test files are excluded — the judge applies the gold\n    // `test_patch` itself, so an agent edit to a test would collide on apply. The\n    // paths come out `a/<repo-relative>` (cwd = repo root), matching the gold\n    // patch format the swebench judge's `git apply` expects.\n    // Pre-stage: clone the instance repo at base_commit into SWE_REPO_DIR so the\n    // agent only edits (the harness owns the checkout — a stochastic model can't be\n    // trusted to clone to an exact path). `--quiet` keeps the exec output small.\n    boxSetup(task) {\n      const { repo, base } = sweMetadata(task)\n      return {\n        command: `rm -rf ${shellQuote(SWE_REPO_DIR)} && git clone --quiet ${shellQuote(`https://github.com/${repo}`)} ${shellQuote(SWE_REPO_DIR)} && git -C ${shellQuote(SWE_REPO_DIR)} checkout --quiet ${shellQuote(base)}`,\n      }\n    },\n    boxExtract() {\n      return {\n        command: `git -C ${shellQuote(SWE_REPO_DIR)} add -A && git -C ${shellQuote(SWE_REPO_DIR)} diff --cached -- . ${TEST_FILE_EXCLUDES}`,\n      }\n    },\n\n    async preflight() {\n      await preflightVenvImports({\n        modules: ['swebench'],\n        requireDocker: true,\n        fix:\n          `Fix: (1) python3 -m venv bench/.venv && bench/.venv/bin/pip install 'swebench>=4,<6' ; ` +\n          `(2) ensure the Docker daemon is running (the judge builds per-instance images).`,\n      })\n      legacyFlags = await detectLegacyFlags()\n    },\n\n    async loadTasks(opts: LoadOptions = {}) {\n      const limit = opts.limit ?? 10\n      const split = opts.split ?? 'test'\n      // Dump instances as JSON via the datasets loader (HF download on first run).\n      const script = `\nimport json, sys\nfrom datasets import load_dataset\nds = load_dataset(${JSON.stringify(DATASET)}, split=${JSON.stringify(split)})\nids = set(json.loads(sys.argv[1])) if len(sys.argv) > 1 and sys.argv[1] else None\nout = []\nfor r in ds:\n    if ids is not None and r[\"instance_id\"] not in ids:\n        continue\n    out.append({\n        \"instance_id\": r[\"instance_id\"], \"repo\": r[\"repo\"], \"base_commit\": r[\"base_commit\"],\n        \"problem_statement\": r[\"problem_statement\"], \"patch\": r[\"patch\"], \"test_patch\": r[\"test_patch\"],\n        \"FAIL_TO_PASS\": r[\"FAIL_TO_PASS\"], \"PASS_TO_PASS\": r[\"PASS_TO_PASS\"],\n        \"version\": r.get(\"version\"), \"environment_setup_commit\": r.get(\"environment_setup_commit\"),\n    })\n    if ids is None and len(out) >= ${limit}:\n        break\nprint(json.dumps(out))\n`\n      const stdout = await runVenvPython(script, [opts.ids ? JSON.stringify(opts.ids) : ''])\n      const rows = JSON.parse(stdout) as Array<Record<string, unknown>>\n      return rows.map(\n        (r): BenchTask => ({\n          id: String(r.instance_id),\n          split,\n          prompt: [\n            `Repository: ${r.repo} @ ${r.base_commit}`,\n            '',\n            `The repository is ALREADY cloned at ${SWE_REPO_DIR}, checked out at commit ${r.base_commit}. Work there directly (\\`cd ${SWE_REPO_DIR}\\`); do not re-clone.`,\n            '',\n            'Resolve this issue by editing the repository SOURCE so the failing tests pass without breaking the passing ones. Do NOT edit test files — the evaluation runs hidden tests on a fresh checkout, so editing tests does not count. Keep the change minimal and confined to the cloned repo.',\n            'Work iteratively: reproduce the issue, implement the fix in the source, and re-run the relevant tests until they pass. You do NOT need to print the diff — the harness reads your committed edits directly from the repo.',\n            '',\n            '--- Issue ---',\n            String(r.problem_statement ?? ''),\n          ].join('\\n'),\n          metadata: r,\n        }),\n      )\n    },\n\n    async goldArtifact(task: BenchTask) {\n      const gold = task.metadata?.patch\n      return typeof gold === 'string' ? gold : undefined\n    },\n\n    async judge(task: BenchTask, artifact: string): Promise<BenchScore> {\n      const useLegacyFlags = await ensureLegacyFlags()\n      const runId = safeRunId('bench', task.id)\n      const capture = options.captureEvaluatorArtifacts?.({\n        taskId: task.id,\n        runId,\n        attemptSequence: ++attemptSequence,\n      })\n      return runStagedJudge({\n        tmpPrefix: 'swebench-',\n        ...(options.timeoutMs === undefined ? {} : { timeoutMs: options.timeoutMs }),\n        ...(capture === undefined ? {} : { capture }),\n        // Debug: retain the staged dir (holds swebench's per-instance apply/run\n        // logs) for post-mortem when SWEBENCH_KEEP_TMP is set. Off by default.\n        ...(process.env.SWEBENCH_KEEP_TMP ? { keepTmp: true } : {}),\n        async stage(dir) {\n          await stageFile(\n            join(dir, 'preds.json'),\n            JSON.stringify([\n              { instance_id: task.id, model_name_or_path: 'agent-runtime-bench', model_patch: artifact },\n            ]),\n          )\n        },\n        // The official evaluation harness. Pulls/builds the instance image, applies\n        // the patch, runs the test spec, writes a per-run report JSON in cwd.\n        argv: (dir) => sweEvaluationArgvForHarness({\n          predictionsPath: join(dir, 'preds.json'),\n          runId,\n          instanceId: task.id,\n          cacheLevel,\n          namespace: scorerNamespace(),\n        }, useLegacyFlags),\n        async parseReport(dir) {\n          // Report file: agent-runtime-bench.<run_id>.json\n          const report = await readJsonReport<SweReport>(join(dir, `agent-runtime-bench.${runId}.json`))\n          return scoreSweReport(task.id, report)\n        },\n      })\n    },\n  }\n\n  async function detectLegacyFlags(): Promise<boolean> {\n    const script = `\nimport subprocess, sys\nresult = subprocess.run([sys.executable, '-m', 'swebench.harness.run_evaluation', '--help'], capture_output=True, text=True)\nif result.returncode != 0:\n    raise SystemExit(result.stderr or result.stdout or str(result.returncode))\nprint('legacy' if '--namespace' in result.stdout and '--cache_level' in result.stdout else 'modern')\n`\n    return (await runVenvPython(script)).trim() === 'legacy'\n  }\n\n  async function ensureLegacyFlags(): Promise<boolean> {\n    if (legacyFlags === undefined) legacyFlags = await detectLegacyFlags()\n    return legacyFlags\n  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Fully deterministic\n * — no LLM judge.\n *\n * Requires: the bench `.venv` with `swebench` installed + a running Docker\n * daemon (per-instance images are pulled/built on first run).\n *\n * Process/Docker/report plumbing is shared via ./_harness; this file owns the\n * SWE-specific pieces: the patch OutputAdapter, the dataset dump, and the\n * predictions-file → run_evaluation argv → report-shape mapping.\n */\n\nimport { join } from 'node:path'\nimport type { OutputAdapter } from '@tangle-network/agent-runtime/kernel'\nimport {\n  preflightVenvImports,\n  readJsonReport,\n  runStagedJudge,\n  runVenvPython,\n  safeRunId,\n  stageFile,\n  type StagedRunCaptureSpec,\n} from './_harness'\nimport type { BenchmarkAdapter, BenchScore, BenchTask, LoadOptions } from './types'\n\n/** Root-level directories are not writable in every sandbox; use the session workspace. */\nconst SWE_REPO_DIR = './swe-bench-repo'\n\n/**\n * The SWE deliverable's FALLBACK parser, from the agent's event STREAM.\n *\n * The PRIMARY deliverable is `boxExtract` below: a `git diff` of the agent's\n * actual edits, read from the cloned repo's STATE inside the box (standard\n * SWE-bench practice). This event-stream parse only runs when that diff is empty\n * — a model that edited the source correctly but never printed a fenced diff (the\n * exact failure this replaces) still scores off its real changes, not its prose.\n */\nexport const swePatchOutput: OutputAdapter<string> = {\n  parse(events) {\n    let text = ''\n    for (const ev of events) {\n      const d = (ev as { data?: Record<string, unknown> })?.data\n      const t = d?.finalText ?? d?.text ?? d?.result\n      if (typeof t === 'string' && t.length > 0) text = t\n    }\n    // Last ```diff/```patch fenced block (the contract the prompt asks for);\n    // fall back to the raw text so a fence-less but valid diff still reaches the judge.\n    const fences = [...text.matchAll(/```(?:diff|patch)?\\s*\\n([\\s\\S]*?)```/g)]\n    const last = fences.at(-1)?.[1]\n    return (last ?? text).trim()\n  },\n}\n\nconst DATASET = 'princeton-nlp/SWE-bench_Verified'\nexport type SweBenchCacheLevel = 'none' | 'base' | 'env' | 'instance'\n\nexport interface SweBenchArtifactCaptureContext {\n  readonly taskId: string\n  readonly runId: string\n  /** One-based sequence unique within this adapter instance. */\n  readonly attemptSequence: number\n}\n\nexport interface SweBenchAdapterOptions {\n  readonly timeoutMs?: number\n  readonly cacheLevel?: SweBenchCacheLevel\n  /**\n   * Return a unique destination for any attempt whose complete official\n   * evaluator directory and process logs should be retained.\n   */\n  readonly captureEvaluatorArtifacts?: (\n    context: SweBenchArtifactCaptureContext,\n  ) => StagedRunCaptureSpec | undefined\n}\n\nconst SWE_CACHE_LEVELS = new Set<SweBenchCacheLevel>(['none', 'base', 'env', 'instance'])\n\nfunction scorerNamespace(): 'swebench' | 'none' {\n  const namespace = process.env.SWEBENCH_NAMESPACE ?? 'swebench'\n  if (namespace !== 'swebench' && namespace !== 'none') {\n    throw new Error(`SWEBENCH_NAMESPACE must be swebench|none, got \"${namespace}\"`)\n  }\n  return namespace\n}\nconst TEST_FILE_EXCLUDES = [\n  \"':(exclude,glob)**/tests/**'\",\n  \"':(exclude,glob)**/test/**'\",\n  \"':(exclude,glob)test_*.py'\",\n  \"':(exclude,glob)**/test_*.py'\",\n  \"':(exclude,glob)*_test.py'\",\n  \"':(exclude,glob)**/*_test.py'\",\n  \"':(exclude,glob)conftest.py'\",\n  \"':(exclude,glob)**/conftest.py'\",\n].join(' ')\n\ninterface SweReport {\n  resolved_instances?: number\n  resolved_ids?: string[]\n  unresolved_ids?: string[]\n  empty_patch_ids?: string[]\n  completed_ids?: string[]\n  incomplete_ids?: string[]\n  error_ids?: string[]\n  submitted_ids?: string[]\n}\n\nfunction stringIds(report: Record<string, unknown>, key: keyof SweReport): string[] {\n  const value = report[key]\n  if (value === undefined) return []\n  if (!Array.isArray(value) || value.some((entry) => typeof entry !== 'string')) {\n    throw new Error(`swe-bench: malformed ${key}`)\n  }\n  return value\n}\n\n/** Convert one official report into a score without turning evaluator failures into agent failures. */\nexport function scoreSweReport(taskId: string, value: unknown): BenchScore {\n  if (!value || typeof value !== 'object' || Array.isArray(value)) {\n    throw new Error('swe-bench: report must be an object')\n  }\n  const report = value as Record<string, unknown>\n  const statusIds = {\n    resolved: stringIds(report, 'resolved_ids'),\n    unresolved: stringIds(report, 'unresolved_ids'),\n    emptyPatch: stringIds(report, 'empty_patch_ids'),\n    completed: stringIds(report, 'completed_ids'),\n    incomplete: stringIds(report, 'incomplete_ids'),\n    error: stringIds(report, 'error_ids'),\n  }\n  const submitted = stringIds(report, 'submitted_ids')\n  const mentioned = Object.values(statusIds).flat()\n  if (\n    mentioned.some((id) => id !== taskId)\n    || (submitted.length > 0 && (submitted.length !== 1 || submitted[0] !== taskId))\n  ) {\n    throw new Error(`swe-bench: report identity mismatch for ${taskId}`)\n  }\n  if (statusIds.error.includes(taskId) || statusIds.incomplete.includes(taskId)) {\n    throw new Error(`swe-bench: evaluator failed for ${taskId}`)\n  }\n  const outcomes = [\n    statusIds.resolved.includes(taskId),\n    statusIds.unresolved.includes(taskId),\n    statusIds.emptyPatch.includes(taskId),\n  ]\n  if (outcomes.filter(Boolean).length !== 1) {\n    throw new Error(`swe-bench: report has no unique outcome for ${taskId}`)\n  }\n  if ((outcomes[0] || outcomes[1]) && !statusIds.completed.includes(taskId)) {\n    throw new Error(`swe-bench: report lacks a completed evaluation for ${taskId}`)\n  }\n  const resolved = outcomes[0]\n  return { resolved, score: resolved ? 1 : 0, detail: JSON.stringify(report) }\n}\n\nexport function sweEvaluationArgv(args: {\n  readonly predictionsPath: string\n  readonly runId: string\n  readonly instanceId: string\n  readonly cacheLevel: SweBenchCacheLevel\n  readonly namespace?: 'swebench' | 'none'\n}): string[] {\n  return sweEvaluationArgvForHarness(args, true)\n}\n\nfunction sweEvaluationArgvForHarness(args: {\n  readonly predictionsPath: string\n  readonly runId: string\n  readonly instanceId: string\n  readonly cacheLevel: SweBenchCacheLevel\n  readonly namespace?: 'swebench' | 'none'\n}, legacyFlags: boolean): string[] {\n  const common = [\n    '-m', 'swebench.harness.run_evaluation',\n    '--dataset_name', DATASET,\n    '--predictions_path', args.predictionsPath,\n    '--run_id', args.runId,\n    '--instance_ids', args.instanceId,\n    '--max_workers', '1',\n  ]\n  if (!legacyFlags) return common\n  return [...common, '--namespace', args.namespace ?? scorerNamespace(), '--cache_level', args.cacheLevel]\n}\n\nfunction shellQuote(value: string): string {\n  return `'${value.replace(/'/g, `'\\\\''`)}'`\n}\n\nfunction sweMetadata(task: BenchTask): { repo: string; base: string } {\n  const repo = String(task.metadata?.repo ?? 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'env'\n  if (!SWE_CACHE_LEVELS.has(cacheLevel)) throw new Error('swe-bench: invalid cacheLevel')\n  if (\n    options.captureEvaluatorArtifacts !== undefined\n    && typeof options.captureEvaluatorArtifacts !== 'function'\n  ) throw new Error('swe-bench: captureEvaluatorArtifacts must be a function')\n  let attemptSequence = 0\n  let legacyFlags: boolean | undefined\n  return {\n    name: 'swe-bench-verified',\n    output: swePatchOutput,\n\n    // Extract the patch from repo STATE, not printed text: stage every edit the\n    // agent made in the cloned repo and diff it against the checked-out\n    // base_commit (`HEAD`). Test files are excluded — the judge applies the gold\n    // `test_patch` itself, so an agent edit to a test would collide on apply. The\n    // paths come out `a/<repo-relative>` (cwd = repo root), matching the gold\n    // patch format the swebench judge's `git apply` expects.\n    // Pre-stage: clone the instance repo at base_commit into SWE_REPO_DIR so the\n    // agent only edits (the harness owns the checkout — a stochastic model can't be\n    // trusted to clone to an exact path). `--quiet` keeps the exec output small.\n    boxSetup(task) {\n      const { repo, base } = sweMetadata(task)\n      return {\n        command: `rm -rf ${shellQuote(SWE_REPO_DIR)} && git clone --quiet ${shellQuote(`https://github.com/${repo}`)} ${shellQuote(SWE_REPO_DIR)} && git -C ${shellQuote(SWE_REPO_DIR)} checkout --quiet ${shellQuote(base)}`,\n      }\n    },\n    boxExtract() {\n      return {\n        command: `git -C ${shellQuote(SWE_REPO_DIR)} add -A && git -C ${shellQuote(SWE_REPO_DIR)} diff --cached -- . ${TEST_FILE_EXCLUDES}`,\n      }\n    },\n\n    async preflight() {\n      await preflightVenvImports({\n        modules: ['swebench'],\n        requireDocker: true,\n        fix:\n          `Fix: (1) python3 -m venv bench/.venv && bench/.venv/bin/pip install 'swebench>=4,<6' ; ` +\n          `(2) ensure the Docker daemon is running (the judge builds per-instance images).`,\n      })\n      legacyFlags = await detectLegacyFlags()\n    },\n\n    async loadTasks(opts: LoadOptions = {}) {\n      const limit = opts.limit ?? 10\n      const split = opts.split ?? 'test'\n      // Dump instances as JSON via the datasets loader (HF download on first run).\n      const script = `\nimport json, sys\nfrom datasets import load_dataset\nds = load_dataset(${JSON.stringify(DATASET)}, split=${JSON.stringify(split)})\nids = set(json.loads(sys.argv[1])) if len(sys.argv) > 1 and sys.argv[1] else None\nout = []\nfor r in ds:\n    if ids is not None and r[\"instance_id\"] not in ids:\n        continue\n    out.append({\n        \"instance_id\": r[\"instance_id\"], \"repo\": r[\"repo\"], \"base_commit\": r[\"base_commit\"],\n        \"problem_statement\": r[\"problem_statement\"], \"patch\": r[\"patch\"], \"test_patch\": r[\"test_patch\"],\n        \"FAIL_TO_PASS\": r[\"FAIL_TO_PASS\"], \"PASS_TO_PASS\": r[\"PASS_TO_PASS\"],\n        \"version\": r.get(\"version\"), \"environment_setup_commit\": r.get(\"environment_setup_commit\"),\n    })\n    if ids is None and len(out) >= ${limit}:\n        break\nprint(json.dumps(out))\n`\n      const stdout = await runVenvPython(script, [opts.ids ? JSON.stringify(opts.ids) : ''])\n      const rows = JSON.parse(stdout) as Array<Record<string, unknown>>\n      return rows.map(\n        (r): BenchTask => ({\n          id: String(r.instance_id),\n          split,\n          prompt: [\n            `Repository: ${r.repo} @ ${r.base_commit}`,\n            '',\n            `The repository is ALREADY cloned at ${SWE_REPO_DIR} relative to your initial session workspace, checked out at commit ${r.base_commit}. Work there directly (\\`cd ${SWE_REPO_DIR}\\`); do not re-clone.`,\n            '',\n            'Resolve this issue by editing the repository SOURCE so the failing tests pass without breaking the passing ones. Do NOT edit test files — the evaluation runs hidden tests on a fresh checkout, so editing tests does not count. Keep the change minimal and confined to the cloned repo.',\n            'Work iteratively: reproduce the issue, implement the fix in the source, and re-run the relevant tests until they pass. You do NOT need to print the diff — the harness reads your source edits directly from the repo, including uncommitted changes.',\n            '',\n            '--- Issue ---',\n            String(r.problem_statement ?? ''),\n          ].join('\\n'),\n          metadata: r,\n        }),\n      )\n    },\n\n    async goldArtifact(task: BenchTask) {\n      const gold = task.metadata?.patch\n      return typeof gold === 'string' ? gold : undefined\n    },\n\n    async judge(task: BenchTask, artifact: string): Promise<BenchScore> {\n      const useLegacyFlags = await ensureLegacyFlags()\n      const runId = safeRunId('bench', task.id)\n      const capture = options.captureEvaluatorArtifacts?.({\n        taskId: task.id,\n        runId,\n        attemptSequence: ++attemptSequence,\n      })\n      return runStagedJudge({\n        tmpPrefix: 'swebench-',\n        ...(options.timeoutMs === undefined ? {} : { timeoutMs: options.timeoutMs }),\n        ...(capture === undefined ? {} : { capture }),\n        // Debug: retain the staged dir (holds swebench's per-instance apply/run\n        // logs) for post-mortem when SWEBENCH_KEEP_TMP is set. Off by default.\n        ...(process.env.SWEBENCH_KEEP_TMP ? { keepTmp: true } : {}),\n        async stage(dir) {\n          await stageFile(\n            join(dir, 'preds.json'),\n            JSON.stringify([\n              { instance_id: task.id, model_name_or_path: 'agent-runtime-bench', model_patch: artifact },\n            ]),\n          )\n        },\n        // The official evaluation harness. Pulls/builds the instance image, applies\n        // the patch, runs the test spec, writes a per-run report JSON in cwd.\n        argv: (dir) => sweEvaluationArgvForHarness({\n          predictionsPath: join(dir, 'preds.json'),\n          runId,\n          instanceId: task.id,\n          cacheLevel,\n          namespace: scorerNamespace(),\n        }, useLegacyFlags),\n        async parseReport(dir) {\n          // Report file: agent-runtime-bench.<run_id>.json\n          const report = await readJsonReport<SweReport>(join(dir, `agent-runtime-bench.${runId}.json`))\n          return scoreSweReport(task.id, report)\n        },\n      })\n    },\n  }\n\n  async function detectLegacyFlags(): Promise<boolean> {\n    const script = `\nimport subprocess, sys\nresult = subprocess.run([sys.executable, '-m', 'swebench.harness.run_evaluation', '--help'], capture_output=True, text=True)\nif result.returncode != 0:\n    raise SystemExit(result.stderr or result.stdout or 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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@tangle-network/agent-bench",
-  "version": "0.11.2",
+  "version": "0.11.3",
   "type": "module",
   "description": "Benchmark adapters and execution for agent-runtime across coding, tool-use, RAG, memory, browser, and terminal tasks.",
   "repository": {
@@ -25,11 +25,11 @@
     }
   },
   "dependencies": {
-    "@tangle-network/agent-eval": ">=0.179.0 <0.180.0",
+    "@tangle-network/agent-eval": ">=0.180.0 <0.181.0",
     "@tangle-network/agent-interface": "^2.6.0",
-    "@tangle-network/agent-knowledge": "^15.0.2",
+    "@tangle-network/agent-knowledge": "^15.0.3",
     "@tangle-network/sandbox": ">=0.36.4 <0.39.0",
-    "@tangle-network/agent-runtime": "^0.205.0"
+    "@tangle-network/agent-runtime": "^0.209.0"
   },
   "devDependencies": {
     "@arethetypeswrong/cli": "0.18.5",

package/src/benchmarks/swe-bench.test.mts

@@ -1,5 +1,9 @@
 import assert from 'node:assert/strict'
 import test from 'node:test'
+import { execFileSync } from 'node:child_process'
+import { mkdtempSync, mkdirSync, writeFileSync, rmSync, existsSync } from 'node:fs'
+import { tmpdir } from 'node:os'
+import { join } from 'node:path'
 import { createSweBenchAdapter, scoreSweReport, sweEvaluationArgv } from './swe-bench'
 
 const taskId = 'django__django-12345'
@@ -59,3 +63,48 @@ test('SWE evaluation command preserves the requested instance image', () => {
     /invalid cacheLevel/,
   )
 })
+
+test('SWE setup and extraction stay in the session workspace and exclude test edits', () => {
+  const root = mkdtempSync(join(tmpdir(), 'swe-workspace-'))
+  try {
+    const origin = join(root, 'origin')
+    const workspace = join(root, 'session')
+    mkdirSync(origin)
+    mkdirSync(workspace)
+    const git = (args: string[], input?: string) => execFileSync('git', args, { cwd: origin, input, encoding: 'utf8' }).trim()
+    git(['init', '--quiet'])
+    const blob = git(['hash-object', '-w', '--stdin'], 'before\n')
+    const tree = git(['mktree'], `100644 blob ${blob}\tsource.py\n`)
+    // Construct fixture history without changing the developer's Git identity or configuration.
+    const base = git(['hash-object', '-t', 'commit', '-w', '--stdin'],
+      `tree ${tree}\nauthor Fixture <fixture@example.invalid> 1 +0000\ncommitter Fixture <fixture@example.invalid> 1 +0000\n\nfixture\n`)
+    git(['update-ref', 'HEAD', base])
+    const task = { id: taskId, prompt: 'fix', metadata: { repo: 'fixture/repo', base_commit: base } }
+    const adapter = createSweBenchAdapter()
+    const setup = adapter.boxSetup!(task)
+    const extract = adapter.boxExtract!(task)
+    assert.match(setup.command, /^rm -rf '\.\//)
+    assert.equal(setup.cwd, undefined)
+    assert.equal(extract.cwd, undefined)
+    const env = {
+      ...process.env,
+      GIT_CONFIG_COUNT: '2',
+      GIT_CONFIG_KEY_0: `url.file://${origin}.insteadOf`,
+      GIT_CONFIG_VALUE_0: 'https://github.com/fixture/repo',
+      GIT_CONFIG_KEY_1: 'protocol.file.allow',
+      GIT_CONFIG_VALUE_1: 'always',
+    }
+    execFileSync('sh', ['-c', setup.command], { cwd: workspace, env })
+    const repo = join(workspace, 'swe-bench-repo')
+    assert.ok(existsSync(join(repo, '.git')))
+    writeFileSync(join(repo, 'source.py'), 'after\n')
+    mkdirSync(join(repo, 'tests'))
+    writeFileSync(join(repo, 'tests', 'test_fix.py'), 'hidden-test-edit\n')
+    const patch = execFileSync('sh', ['-c', extract.command], { cwd: workspace, env, encoding: 'utf8' })
+    assert.match(patch, /diff --git a\/source.py b\/source.py/)
+    assert.match(patch, /\+after/)
+    assert.doesNotMatch(patch, /hidden-test-edit|test_fix/)
+  } finally {
+    rmSync(root, { recursive: true, force: true })
+  }
+})

package/src/benchmarks/swe-bench.ts

@@ -25,13 +25,8 @@ import {
 } from './_harness'
 import type { BenchmarkAdapter, BenchScore, BenchTask, LoadOptions } from './types'
 
-/**
- * Fixed in-box path the agent clones the instance repo into. It is the SINGLE
- * source of truth shared by the prompt template (which tells the agent to clone
- * here) and `boxExtract` (which runs `git diff` here after the shot) — so the
- * harness always knows exactly where the agent's edits live, for any instance.
- */
-const SWE_REPO_DIR = '/work'
+/** Root-level directories are not writable in every sandbox; use the session workspace. */
+const SWE_REPO_DIR = './swe-bench-repo'
 
 /**
  * The SWE deliverable's FALLBACK parser, from the agent's event STREAM.
@@ -286,10 +281,10 @@ print(json.dumps(out))
           prompt: [
             `Repository: ${r.repo} @ ${r.base_commit}`,
             '',
-            `The repository is ALREADY cloned at ${SWE_REPO_DIR}, checked out at commit ${r.base_commit}. Work there directly (\`cd ${SWE_REPO_DIR}\`); do not re-clone.`,
+            `The repository is ALREADY cloned at ${SWE_REPO_DIR} relative to your initial session workspace, checked out at commit ${r.base_commit}. Work there directly (\`cd ${SWE_REPO_DIR}\`); do not re-clone.`,
             '',
             'Resolve this issue by editing the repository SOURCE so the failing tests pass without breaking the passing ones. Do NOT edit test files — the evaluation runs hidden tests on a fresh checkout, so editing tests does not count. Keep the change minimal and confined to the cloned repo.',
-            'Work iteratively: reproduce the issue, implement the fix in the source, and re-run the relevant tests until they pass. You do NOT need to print the diff — the harness reads your committed edits directly from the repo.',
+            'Work iteratively: reproduce the issue, implement the fix in the source, and re-run the relevant tests until they pass. You do NOT need to print the diff — the harness reads your source edits directly from the repo, including uncommitted changes.',
             '',
             '--- Issue ---',
             String(r.problem_statement ?? ''),