@synsci/openscience 1.2.0

package/bin/bin/openscience

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+#!/usr/bin/env node
+
+const childProcess = require("child_process")
+const fs = require("fs")
+const path = require("path")
+const os = require("os")
+
+function run(target) {
+  // Clean up files that confuse Bun compiled binaries.
+  // Install dir stays as ~/.openscience/ until the path-migration follow-up PR.
+  const openscienceDir = path.join(os.homedir(), ".openscience")
+  for (const poison of ["package.json", ".gitignore", "bun.lockb", "bunfig.toml"]) {
+    try { fs.unlinkSync(path.join(openscienceDir, poison)) } catch {}
+  }
+  try { fs.rmSync(path.join(openscienceDir, "node_modules"), { recursive: true }) } catch {}
+  // Clear macOS extended attributes that cause Bun binaries to hang
+  if (os.platform() === "darwin") {
+    try { childProcess.spawnSync("xattr", ["-rc", openscienceDir], { stdio: "ignore" }) } catch {}
+  }
+
+  const result = childProcess.spawnSync(target, process.argv.slice(2), {
+    stdio: "inherit",
+  })
+  if (result.error) {
+    console.error(result.error.message)
+    process.exit(1)
+  }
+  const code = typeof result.status === "number" ? result.status : 0
+  process.exit(code)
+}
+
+// Helper: check if a path points to a real binary (not this wrapper script)
+function isBinary(p) {
+  try {
+    if (!fs.existsSync(p)) return false
+    const real = fs.realpathSync(p)
+    // Skip if it resolves to this script (self-reference via symlink)
+    if (real === fs.realpathSync(__filename)) return false
+    // Skip if it's a .js file (another wrapper)
+    if (real.endsWith(".js")) return false
+    return true
+  } catch {
+    return false
+  }
+}
+
+// 1. Check OPENSCIENCE_BIN_PATH env var
+const envPath = process.env.OPENSCIENCE_BIN_PATH
+if (envPath && isBinary(envPath)) {
+  run(envPath)
+}
+
+const binary = os.platform() === "win32" ? "openscience.exe" : "openscience"
+const scriptPath = fs.realpathSync(__filename)
+const scriptDir = path.dirname(scriptPath)
+
+const platformMap = { darwin: "darwin", linux: "linux", win32: "windows" }
+const archMap = { x64: "x64", arm64: "arm64", arm: "arm" }
+const platform = platformMap[os.platform()] || os.platform()
+const arch = archMap[os.arch()] || os.arch()
+const base = "openscience-" + platform + "-" + arch
+const scopedBase = "cli-" + platform + "-" + arch
+
+// 2. Search this install's node_modules for the matching platform package.
+// This must come before ~/.openscience or Homebrew fallbacks; otherwise an npm
+// install can accidentally launch an older globally-installed binary.
+let current = scriptDir
+while (true) {
+  const modules = path.join(current, "node_modules")
+  if (fs.existsSync(modules)) {
+    try {
+      const entries = fs.readdirSync(modules)
+      for (const entry of entries) {
+        if (entry.startsWith(base)) {
+          const candidate = path.join(modules, entry, "bin", binary)
+          if (isBinary(candidate)) run(candidate)
+        }
+      }
+      // Check scoped packages (@synsci/openscience-darwin-arm64)
+      const scoped = path.join(modules, "@openscience")
+      if (fs.existsSync(scoped)) {
+        const scopedEntries = fs.readdirSync(scoped)
+        for (const entry of scopedEntries) {
+          if (entry.startsWith(scopedBase)) {
+            const candidate = path.join(scoped, entry, "bin", binary)
+            if (isBinary(candidate)) run(candidate)
+          }
+        }
+      }
+    } catch {}
+  }
+  const parent = path.dirname(current)
+  if (parent === current) break
+  current = parent
+}
+
+// 3. Check ~/.openscience/bin (curl installer fallback; dir renamed later)
+const homeBin = path.join(os.homedir(), ".openscience", "bin", binary)
+if (isBinary(homeBin)) {
+  run(homeBin)
+}
+
+// 4. Check /opt/homebrew/bin (macOS)
+if (os.platform() === "darwin" && isBinary("/opt/homebrew/bin/openscience")) {
+  run("/opt/homebrew/bin/openscience")
+}
+
+// 5. Check /usr/local/bin
+if (isBinary("/usr/local/bin/openscience")) {
+  run("/usr/local/bin/openscience")
+}
+
+console.error("openscience binary not found.")
+console.error("Install with: curl -fsSL https://syntheticsciences.ai/install | bash")
+console.error("Or set OPENSCIENCE_BIN_PATH environment variable.")
+process.exit(1)

package/bin/openscience

@@ -0,0 +1,116 @@
+#!/usr/bin/env node
+
+const childProcess = require("child_process")
+const fs = require("fs")
+const path = require("path")
+const os = require("os")
+
+function run(target) {
+  // Clean up files that confuse Bun compiled binaries.
+  // Install dir stays as ~/.openscience/ until the path-migration follow-up PR.
+  const openscienceDir = path.join(os.homedir(), ".openscience")
+  for (const poison of ["package.json", ".gitignore", "bun.lockb", "bunfig.toml"]) {
+    try { fs.unlinkSync(path.join(openscienceDir, poison)) } catch {}
+  }
+  try { fs.rmSync(path.join(openscienceDir, "node_modules"), { recursive: true }) } catch {}
+  // Clear macOS extended attributes that cause Bun binaries to hang
+  if (os.platform() === "darwin") {
+    try { childProcess.spawnSync("xattr", ["-rc", openscienceDir], { stdio: "ignore" }) } catch {}
+  }
+
+  const result = childProcess.spawnSync(target, process.argv.slice(2), {
+    stdio: "inherit",
+  })
+  if (result.error) {
+    console.error(result.error.message)
+    process.exit(1)
+  }
+  const code = typeof result.status === "number" ? result.status : 0
+  process.exit(code)
+}
+
+// Helper: check if a path points to a real binary (not this wrapper script)
+function isBinary(p) {
+  try {
+    if (!fs.existsSync(p)) return false
+    const real = fs.realpathSync(p)
+    // Skip if it resolves to this script (self-reference via symlink)
+    if (real === fs.realpathSync(__filename)) return false
+    // Skip if it's a .js file (another wrapper)
+    if (real.endsWith(".js")) return false
+    return true
+  } catch {
+    return false
+  }
+}
+
+// 1. Check OPENSCIENCE_BIN_PATH env var
+const envPath = process.env.OPENSCIENCE_BIN_PATH
+if (envPath && isBinary(envPath)) {
+  run(envPath)
+}
+
+const binary = os.platform() === "win32" ? "openscience.exe" : "openscience"
+const scriptPath = fs.realpathSync(__filename)
+const scriptDir = path.dirname(scriptPath)
+
+const platformMap = { darwin: "darwin", linux: "linux", win32: "windows" }
+const archMap = { x64: "x64", arm64: "arm64", arm: "arm" }
+const platform = platformMap[os.platform()] || os.platform()
+const arch = archMap[os.arch()] || os.arch()
+const base = "openscience-" + platform + "-" + arch
+const scopedBase = "cli-" + platform + "-" + arch
+
+// 2. Search this install's node_modules for the matching platform package.
+// This must come before ~/.openscience or Homebrew fallbacks; otherwise an npm
+// install can accidentally launch an older globally-installed binary.
+let current = scriptDir
+while (true) {
+  const modules = path.join(current, "node_modules")
+  if (fs.existsSync(modules)) {
+    try {
+      const entries = fs.readdirSync(modules)
+      for (const entry of entries) {
+        if (entry.startsWith(base)) {
+          const candidate = path.join(modules, entry, "bin", binary)
+          if (isBinary(candidate)) run(candidate)
+        }
+      }
+      // Check scoped packages (@synsci/openscience-darwin-arm64)
+      const scoped = path.join(modules, "@openscience")
+      if (fs.existsSync(scoped)) {
+        const scopedEntries = fs.readdirSync(scoped)
+        for (const entry of scopedEntries) {
+          if (entry.startsWith(scopedBase)) {
+            const candidate = path.join(scoped, entry, "bin", binary)
+            if (isBinary(candidate)) run(candidate)
+          }
+        }
+      }
+    } catch {}
+  }
+  const parent = path.dirname(current)
+  if (parent === current) break
+  current = parent
+}
+
+// 3. Check ~/.openscience/bin (curl installer fallback; dir renamed later)
+const homeBin = path.join(os.homedir(), ".openscience", "bin", binary)
+if (isBinary(homeBin)) {
+  run(homeBin)
+}
+
+// 4. Check /opt/homebrew/bin (macOS)
+if (os.platform() === "darwin" && isBinary("/opt/homebrew/bin/openscience")) {
+  run("/opt/homebrew/bin/openscience")
+}
+
+// 5. Check /usr/local/bin
+if (isBinary("/usr/local/bin/openscience")) {
+  run("/usr/local/bin/openscience")
+}
+
+console.error("openscience binary not found.")
+console.error("Install with: curl -fsSL https://syntheticsciences.ai/install | bash")
+console.error("Or set OPENSCIENCE_BIN_PATH environment variable.")
+process.exit(1)

package/package.json

@@ -0,0 +1,24 @@
+{
+  "name": "@synsci/openscience",
+  "bin": {
+    "openscience": "./bin/openscience"
+  },
+  "scripts": {
+    "postinstall": "bun ./postinstall.mjs || node ./postinstall.mjs"
+  },
+  "version": "1.2.0",
+  "optionalDependencies": {
+    "@synsci/openscience-linux-x64-baseline-musl": "1.2.0",
+    "@synsci/openscience-windows-x64-baseline": "1.2.0",
+    "@synsci/openscience-linux-x64-baseline": "1.2.0",
+    "@synsci/openscience-darwin-x64": "1.2.0",
+    "@synsci/openscience-linux-arm64-musl": "1.2.0",
+    "@synsci/openscience-darwin-x64-baseline": "1.2.0",
+    "@synsci/openscience": "1.2.0",
+    "@synsci/openscience-linux-x64-musl": "1.2.0",
+    "@synsci/openscience-darwin-arm64": "1.2.0",
+    "@synsci/openscience-linux-arm64": "1.2.0",
+    "@synsci/openscience-windows-x64": "1.2.0",
+    "@synsci/openscience-linux-x64": "1.2.0"
+  }
+}

package/postinstall.mjs

@@ -0,0 +1,133 @@
+#!/usr/bin/env node
+
+import fs from "fs"
+import path from "path"
+import os from "os"
+import { fileURLToPath } from "url"
+import { createRequire } from "module"
+
+const __dirname = path.dirname(fileURLToPath(import.meta.url))
+const require = createRequire(import.meta.url)
+
+function detectPlatformAndArch() {
+  // Map platform names
+  let platform
+  switch (os.platform()) {
+    case "darwin":
+      platform = "darwin"
+      break
+    case "linux":
+      platform = "linux"
+      break
+    case "win32":
+      platform = "windows"
+      break
+    default:
+      platform = os.platform()
+      break
+  }
+
+  // Map architecture names
+  let arch
+  switch (os.arch()) {
+    case "x64":
+      arch = "x64"
+      break
+    case "arm64":
+      arch = "arm64"
+      break
+    case "arm":
+      arch = "arm"
+      break
+    default:
+      arch = os.arch()
+      break
+  }
+
+  return { platform, arch }
+}
+
+function findBinary() {
+  const { platform, arch } = detectPlatformAndArch()
+  const binaryName = platform === "windows" ? "openscience.exe" : "openscience"
+
+  // Try scoped package first (@synsci/openscience-darwin-arm64), then unscoped (openscience-darwin-arm64)
+  const packageNames = [
+    `@synsci/openscience-${platform}-${arch}`,
+    `openscience-${platform}-${arch}`,
+  ]
+
+  for (const packageName of packageNames) {
+    try {
+      const packageJsonPath = require.resolve(`${packageName}/package.json`)
+      const packageDir = path.dirname(packageJsonPath)
+      const binaryPath = path.join(packageDir, "bin", binaryName)
+
+      if (!fs.existsSync(binaryPath)) {
+        continue
+      }
+
+      return { binaryPath, binaryName }
+    } catch {
+      continue
+    }
+  }
+
+  throw new Error(`Could not find platform binary package for ${platform}-${arch}`)
+}
+
+function prepareBinDirectory(binaryName) {
+  const binDir = path.join(__dirname, "bin")
+  const targetPath = path.join(binDir, binaryName)
+
+  // Ensure bin directory exists
+  if (!fs.existsSync(binDir)) {
+    fs.mkdirSync(binDir, { recursive: true })
+  }
+
+  // Remove existing binary/symlink if it exists
+  if (fs.existsSync(targetPath)) {
+    fs.unlinkSync(targetPath)
+  }
+
+  return { binDir, targetPath }
+}
+
+function symlinkBinary(sourcePath, binaryName) {
+  const { targetPath } = prepareBinDirectory(binaryName)
+
+  fs.symlinkSync(sourcePath, targetPath)
+  console.log(`openscience binary symlinked: ${targetPath} -> ${sourcePath}`)
+
+  // Verify the file exists after operation
+  if (!fs.existsSync(targetPath)) {
+    throw new Error(`Failed to symlink binary to ${targetPath}`)
+  }
+}
+
+async function main() {
+  try {
+    if (os.platform() === "win32") {
+      // On Windows, the .exe is already included in the package and bin field points to it
+      // No postinstall setup needed
+      console.log("Windows detected: binary setup not needed (using packaged .exe)")
+      return
+    }
+
+    // On non-Windows platforms, just verify the binary package exists
+    // Don't replace the wrapper script - it handles binary execution
+    const { binaryPath } = findBinary()
+    console.log(`Platform binary verified at: ${binaryPath}`)
+    console.log("Wrapper script will handle binary execution")
+  } catch (error) {
+    console.error("Failed to setup openscience binary:", error.message)
+    process.exit(1)
+  }
+}
+
+try {
+  main()
+} catch (error) {
+  console.error("Postinstall script error:", error.message)
+  process.exit(0)
+}