@synsci/cli-darwin-arm64 1.1.71 → 1.1.72
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/bin/skills/citation-management/SKILL.md +1109 -0
- package/bin/skills/citation-management/assets/bibtex_template.bib +264 -0
- package/bin/skills/citation-management/assets/citation_checklist.md +386 -0
- package/bin/skills/citation-management/references/bibtex_formatting.md +908 -0
- package/bin/skills/citation-management/references/citation_validation.md +794 -0
- package/bin/skills/citation-management/references/google_scholar_search.md +725 -0
- package/bin/skills/citation-management/references/metadata_extraction.md +870 -0
- package/bin/skills/citation-management/references/pubmed_search.md +839 -0
- package/bin/skills/citation-management/scripts/doi_to_bibtex.py +182 -0
- package/bin/skills/citation-management/scripts/extract_metadata.py +570 -0
- package/bin/skills/citation-management/scripts/format_bibtex.py +349 -0
- package/bin/skills/citation-management/scripts/search_google_scholar.py +251 -0
- package/bin/skills/citation-management/scripts/search_pubmed.py +348 -0
- package/bin/skills/citation-management/scripts/validate_citations.py +494 -0
- package/bin/skills/clinical-decision-support/README.md +129 -0
- package/bin/skills/clinical-decision-support/SKILL.md +506 -0
- package/bin/skills/clinical-decision-support/assets/biomarker_report_template.tex +380 -0
- package/bin/skills/clinical-decision-support/assets/clinical_pathway_template.tex +222 -0
- package/bin/skills/clinical-decision-support/assets/cohort_analysis_template.tex +359 -0
- package/bin/skills/clinical-decision-support/assets/color_schemes.tex +149 -0
- package/bin/skills/clinical-decision-support/assets/example_gbm_cohort.md +208 -0
- package/bin/skills/clinical-decision-support/assets/recommendation_strength_guide.md +328 -0
- package/bin/skills/clinical-decision-support/assets/treatment_recommendation_template.tex +529 -0
- package/bin/skills/clinical-decision-support/references/biomarker_classification.md +719 -0
- package/bin/skills/clinical-decision-support/references/clinical_decision_algorithms.md +604 -0
- package/bin/skills/clinical-decision-support/references/evidence_synthesis.md +840 -0
- package/bin/skills/clinical-decision-support/references/outcome_analysis.md +640 -0
- package/bin/skills/clinical-decision-support/references/patient_cohort_analysis.md +427 -0
- package/bin/skills/clinical-decision-support/references/treatment_recommendations.md +521 -0
- package/bin/skills/clinical-decision-support/scripts/biomarker_classifier.py +383 -0
- package/bin/skills/clinical-decision-support/scripts/build_decision_tree.py +417 -0
- package/bin/skills/clinical-decision-support/scripts/create_cohort_tables.py +509 -0
- package/bin/skills/clinical-decision-support/scripts/generate_survival_analysis.py +441 -0
- package/bin/skills/clinical-decision-support/scripts/validate_cds_document.py +326 -0
- package/bin/skills/clinical-reports/IMPLEMENTATION_SUMMARY.md +641 -0
- package/bin/skills/clinical-reports/README.md +236 -0
- package/bin/skills/clinical-reports/SKILL.md +1127 -0
- package/bin/skills/clinical-reports/assets/case_report_template.md +352 -0
- package/bin/skills/clinical-reports/assets/clinical_trial_csr_template.md +353 -0
- package/bin/skills/clinical-reports/assets/clinical_trial_sae_template.md +359 -0
- package/bin/skills/clinical-reports/assets/consult_note_template.md +305 -0
- package/bin/skills/clinical-reports/assets/discharge_summary_template.md +453 -0
- package/bin/skills/clinical-reports/assets/hipaa_compliance_checklist.md +395 -0
- package/bin/skills/clinical-reports/assets/history_physical_template.md +305 -0
- package/bin/skills/clinical-reports/assets/lab_report_template.md +309 -0
- package/bin/skills/clinical-reports/assets/pathology_report_template.md +249 -0
- package/bin/skills/clinical-reports/assets/quality_checklist.md +338 -0
- package/bin/skills/clinical-reports/assets/radiology_report_template.md +318 -0
- package/bin/skills/clinical-reports/assets/soap_note_template.md +253 -0
- package/bin/skills/clinical-reports/references/case_report_guidelines.md +570 -0
- package/bin/skills/clinical-reports/references/clinical_trial_reporting.md +693 -0
- package/bin/skills/clinical-reports/references/data_presentation.md +530 -0
- package/bin/skills/clinical-reports/references/diagnostic_reports_standards.md +629 -0
- package/bin/skills/clinical-reports/references/medical_terminology.md +588 -0
- package/bin/skills/clinical-reports/references/patient_documentation.md +744 -0
- package/bin/skills/clinical-reports/references/peer_review_standards.md +585 -0
- package/bin/skills/clinical-reports/references/regulatory_compliance.md +577 -0
- package/bin/skills/clinical-reports/scripts/check_deidentification.py +332 -0
- package/bin/skills/clinical-reports/scripts/compliance_checker.py +78 -0
- package/bin/skills/clinical-reports/scripts/extract_clinical_data.py +97 -0
- package/bin/skills/clinical-reports/scripts/format_adverse_events.py +97 -0
- package/bin/skills/clinical-reports/scripts/generate_report_template.py +149 -0
- package/bin/skills/clinical-reports/scripts/terminology_validator.py +126 -0
- package/bin/skills/clinical-reports/scripts/validate_case_report.py +323 -0
- package/bin/skills/clinical-reports/scripts/validate_trial_report.py +88 -0
- package/bin/skills/fireworks-ai/SKILL.md +665 -0
- package/bin/skills/generate-image/SKILL.md +178 -0
- package/bin/skills/generate-image/scripts/generate_image.py +254 -0
- package/bin/skills/groq/SKILL.md +347 -0
- package/bin/skills/hypothesis-generation/SKILL.md +293 -0
- package/bin/skills/hypothesis-generation/assets/FORMATTING_GUIDE.md +672 -0
- package/bin/skills/hypothesis-generation/assets/hypothesis_generation.sty +307 -0
- package/bin/skills/hypothesis-generation/assets/hypothesis_report_template.tex +572 -0
- package/bin/skills/hypothesis-generation/references/experimental_design_patterns.md +329 -0
- package/bin/skills/hypothesis-generation/references/hypothesis_quality_criteria.md +198 -0
- package/bin/skills/hypothesis-generation/references/literature_search_strategies.md +622 -0
- package/bin/skills/latex-posters/README.md +417 -0
- package/bin/skills/latex-posters/SKILL.md +1602 -0
- package/bin/skills/latex-posters/assets/baposter_template.tex +257 -0
- package/bin/skills/latex-posters/assets/beamerposter_template.tex +244 -0
- package/bin/skills/latex-posters/assets/poster_quality_checklist.md +358 -0
- package/bin/skills/latex-posters/assets/tikzposter_template.tex +251 -0
- package/bin/skills/latex-posters/references/latex_poster_packages.md +745 -0
- package/bin/skills/latex-posters/references/poster_content_guide.md +748 -0
- package/bin/skills/latex-posters/references/poster_design_principles.md +806 -0
- package/bin/skills/latex-posters/references/poster_layout_design.md +900 -0
- package/bin/skills/latex-posters/scripts/review_poster.sh +214 -0
- package/bin/skills/literature-review/SKILL.md +641 -0
- package/bin/skills/literature-review/assets/review_template.md +412 -0
- package/bin/skills/literature-review/references/citation_styles.md +166 -0
- package/bin/skills/literature-review/references/database_strategies.md +455 -0
- package/bin/skills/literature-review/scripts/generate_pdf.py +184 -0
- package/bin/skills/literature-review/scripts/search_databases.py +310 -0
- package/bin/skills/literature-review/scripts/verify_citations.py +218 -0
- package/bin/skills/market-research-reports/SKILL.md +904 -0
- package/bin/skills/market-research-reports/assets/FORMATTING_GUIDE.md +428 -0
- package/bin/skills/market-research-reports/assets/market_report_template.tex +1380 -0
- package/bin/skills/market-research-reports/assets/market_research.sty +564 -0
- package/bin/skills/market-research-reports/references/data_analysis_patterns.md +548 -0
- package/bin/skills/market-research-reports/references/report_structure_guide.md +999 -0
- package/bin/skills/market-research-reports/references/visual_generation_guide.md +1077 -0
- package/bin/skills/market-research-reports/scripts/generate_market_visuals.py +472 -0
- package/bin/skills/markitdown/INSTALLATION_GUIDE.md +318 -0
- package/bin/skills/markitdown/LICENSE.txt +22 -0
- package/bin/skills/markitdown/OPENROUTER_INTEGRATION.md +359 -0
- package/bin/skills/markitdown/QUICK_REFERENCE.md +309 -0
- package/bin/skills/markitdown/README.md +184 -0
- package/bin/skills/markitdown/SKILL.md +486 -0
- package/bin/skills/markitdown/SKILL_SUMMARY.md +307 -0
- package/bin/skills/markitdown/assets/example_usage.md +463 -0
- package/bin/skills/markitdown/references/api_reference.md +399 -0
- package/bin/skills/markitdown/references/file_formats.md +542 -0
- package/bin/skills/markitdown/scripts/batch_convert.py +195 -0
- package/bin/skills/markitdown/scripts/convert_literature.py +262 -0
- package/bin/skills/markitdown/scripts/convert_with_ai.py +224 -0
- package/bin/skills/ml-paper-writing/SKILL.md +937 -0
- package/bin/skills/ml-paper-writing/references/checklists.md +361 -0
- package/bin/skills/ml-paper-writing/references/citation-workflow.md +562 -0
- package/bin/skills/ml-paper-writing/references/reviewer-guidelines.md +367 -0
- package/bin/skills/ml-paper-writing/references/sources.md +159 -0
- package/bin/skills/ml-paper-writing/references/writing-guide.md +476 -0
- package/bin/skills/ml-paper-writing/templates/README.md +251 -0
- package/bin/skills/ml-paper-writing/templates/aaai2026/README.md +534 -0
- package/bin/skills/ml-paper-writing/templates/aaai2026/aaai2026-unified-supp.tex +144 -0
- package/bin/skills/ml-paper-writing/templates/aaai2026/aaai2026-unified-template.tex +952 -0
- package/bin/skills/ml-paper-writing/templates/aaai2026/aaai2026.bib +111 -0
- package/bin/skills/ml-paper-writing/templates/aaai2026/aaai2026.bst +1493 -0
- package/bin/skills/ml-paper-writing/templates/aaai2026/aaai2026.sty +315 -0
- package/bin/skills/ml-paper-writing/templates/acl/README.md +50 -0
- package/bin/skills/ml-paper-writing/templates/acl/acl.sty +312 -0
- package/bin/skills/ml-paper-writing/templates/acl/acl_latex.tex +377 -0
- package/bin/skills/ml-paper-writing/templates/acl/acl_lualatex.tex +101 -0
- package/bin/skills/ml-paper-writing/templates/acl/acl_natbib.bst +1940 -0
- package/bin/skills/ml-paper-writing/templates/acl/anthology.bib.txt +26 -0
- package/bin/skills/ml-paper-writing/templates/acl/custom.bib +70 -0
- package/bin/skills/ml-paper-writing/templates/acl/formatting.md +326 -0
- package/bin/skills/ml-paper-writing/templates/colm2025/README.md +3 -0
- package/bin/skills/ml-paper-writing/templates/colm2025/colm2025_conference.bib +11 -0
- package/bin/skills/ml-paper-writing/templates/colm2025/colm2025_conference.bst +1440 -0
- package/bin/skills/ml-paper-writing/templates/colm2025/colm2025_conference.pdf +0 -0
- package/bin/skills/ml-paper-writing/templates/colm2025/colm2025_conference.sty +218 -0
- package/bin/skills/ml-paper-writing/templates/colm2025/colm2025_conference.tex +305 -0
- package/bin/skills/ml-paper-writing/templates/colm2025/fancyhdr.sty +485 -0
- package/bin/skills/ml-paper-writing/templates/colm2025/math_commands.tex +508 -0
- package/bin/skills/ml-paper-writing/templates/colm2025/natbib.sty +1246 -0
- package/bin/skills/ml-paper-writing/templates/iclr2026/fancyhdr.sty +485 -0
- package/bin/skills/ml-paper-writing/templates/iclr2026/iclr2026_conference.bib +24 -0
- package/bin/skills/ml-paper-writing/templates/iclr2026/iclr2026_conference.bst +1440 -0
- package/bin/skills/ml-paper-writing/templates/iclr2026/iclr2026_conference.pdf +0 -0
- package/bin/skills/ml-paper-writing/templates/iclr2026/iclr2026_conference.sty +246 -0
- package/bin/skills/ml-paper-writing/templates/iclr2026/iclr2026_conference.tex +414 -0
- package/bin/skills/ml-paper-writing/templates/iclr2026/math_commands.tex +508 -0
- package/bin/skills/ml-paper-writing/templates/iclr2026/natbib.sty +1246 -0
- package/bin/skills/ml-paper-writing/templates/icml2026/algorithm.sty +79 -0
- package/bin/skills/ml-paper-writing/templates/icml2026/algorithmic.sty +201 -0
- package/bin/skills/ml-paper-writing/templates/icml2026/example_paper.bib +75 -0
- package/bin/skills/ml-paper-writing/templates/icml2026/example_paper.pdf +0 -0
- package/bin/skills/ml-paper-writing/templates/icml2026/example_paper.tex +662 -0
- package/bin/skills/ml-paper-writing/templates/icml2026/fancyhdr.sty +864 -0
- package/bin/skills/ml-paper-writing/templates/icml2026/icml2026.bst +1443 -0
- package/bin/skills/ml-paper-writing/templates/icml2026/icml2026.sty +767 -0
- package/bin/skills/ml-paper-writing/templates/icml2026/icml_numpapers.pdf +0 -0
- package/bin/skills/ml-paper-writing/templates/neurips2025/Makefile +36 -0
- package/bin/skills/ml-paper-writing/templates/neurips2025/extra_pkgs.tex +53 -0
- package/bin/skills/ml-paper-writing/templates/neurips2025/main.tex +38 -0
- package/bin/skills/ml-paper-writing/templates/neurips2025/neurips.sty +382 -0
- package/bin/skills/paper-2-web/SKILL.md +491 -0
- package/bin/skills/paper-2-web/references/installation.md +141 -0
- package/bin/skills/paper-2-web/references/paper2poster.md +346 -0
- package/bin/skills/paper-2-web/references/paper2video.md +305 -0
- package/bin/skills/paper-2-web/references/paper2web.md +187 -0
- package/bin/skills/paper-2-web/references/usage_examples.md +436 -0
- package/bin/skills/peer-review/SKILL.md +702 -0
- package/bin/skills/peer-review/references/calibration_guidelines.md +196 -0
- package/bin/skills/peer-review/references/common_issues.md +552 -0
- package/bin/skills/peer-review/references/paper_mechanics.md +269 -0
- package/bin/skills/peer-review/references/reporting_standards.md +290 -0
- package/bin/skills/peer-review/references/scoring_rubric.md +239 -0
- package/bin/skills/pptx-posters/SKILL.md +410 -0
- package/bin/skills/pptx-posters/assets/poster_html_template.html +257 -0
- package/bin/skills/pptx-posters/assets/poster_quality_checklist.md +358 -0
- package/bin/skills/pptx-posters/references/poster_content_guide.md +748 -0
- package/bin/skills/pptx-posters/references/poster_design_principles.md +806 -0
- package/bin/skills/pptx-posters/references/poster_layout_design.md +900 -0
- package/bin/skills/research-grants/README.md +285 -0
- package/bin/skills/research-grants/SKILL.md +938 -0
- package/bin/skills/research-grants/assets/budget_justification_template.md +453 -0
- package/bin/skills/research-grants/assets/nih_specific_aims_template.md +166 -0
- package/bin/skills/research-grants/assets/nsf_project_summary_template.md +92 -0
- package/bin/skills/research-grants/references/broader_impacts.md +392 -0
- package/bin/skills/research-grants/references/darpa_guidelines.md +636 -0
- package/bin/skills/research-grants/references/doe_guidelines.md +586 -0
- package/bin/skills/research-grants/references/nih_guidelines.md +851 -0
- package/bin/skills/research-grants/references/nsf_guidelines.md +570 -0
- package/bin/skills/research-grants/references/specific_aims_guide.md +458 -0
- package/bin/skills/research-lookup/README.md +156 -0
- package/bin/skills/research-lookup/SKILL.md +606 -0
- package/bin/skills/research-lookup/examples.py +174 -0
- package/bin/skills/research-lookup/lookup.py +187 -0
- package/bin/skills/research-lookup/research_lookup.py +483 -0
- package/bin/skills/research-lookup/scripts/research_lookup.py +483 -0
- package/bin/skills/scholar-evaluation/SKILL.md +289 -0
- package/bin/skills/scholar-evaluation/references/evaluation_framework.md +663 -0
- package/bin/skills/scholar-evaluation/scripts/calculate_scores.py +366 -0
- package/bin/skills/scientific-critical-thinking/SKILL.md +566 -0
- package/bin/skills/scientific-critical-thinking/references/common_biases.md +364 -0
- package/bin/skills/scientific-critical-thinking/references/evidence_hierarchy.md +484 -0
- package/bin/skills/scientific-critical-thinking/references/experimental_design.md +496 -0
- package/bin/skills/scientific-critical-thinking/references/logical_fallacies.md +478 -0
- package/bin/skills/scientific-critical-thinking/references/scientific_method.md +169 -0
- package/bin/skills/scientific-critical-thinking/references/statistical_pitfalls.md +506 -0
- package/bin/skills/scientific-schematics/QUICK_REFERENCE.md +207 -0
- package/bin/skills/scientific-schematics/README.md +327 -0
- package/bin/skills/scientific-schematics/SKILL.md +615 -0
- package/bin/skills/scientific-schematics/example_usage.sh +89 -0
- package/bin/skills/scientific-schematics/references/best_practices.md +559 -0
- package/bin/skills/scientific-schematics/scripts/generate_schematic.py +135 -0
- package/bin/skills/scientific-schematics/scripts/generate_schematic_ai.py +807 -0
- package/bin/skills/scientific-schematics/test_ai_generation.py +243 -0
- package/bin/skills/scientific-slides/SKILL.md +942 -0
- package/bin/skills/scientific-slides/assets/timing_guidelines.md +597 -0
- package/bin/skills/scientific-slides/references/data_visualization_slides.md +708 -0
- package/bin/skills/scientific-slides/references/presentation_structure.md +642 -0
- package/bin/skills/scientific-slides/references/slide_design_principles.md +849 -0
- package/bin/skills/scientific-slides/references/talk_types_guide.md +687 -0
- package/bin/skills/scientific-slides/references/visual_review_workflow.md +775 -0
- package/bin/skills/scientific-slides/scripts/generate_slide_image.py +143 -0
- package/bin/skills/scientific-slides/scripts/generate_slide_image_ai.py +748 -0
- package/bin/skills/scientific-slides/scripts/pdf_to_images.py +201 -0
- package/bin/skills/scientific-slides/scripts/slides_to_pdf.py +220 -0
- package/bin/skills/scientific-slides/scripts/validate_presentation.py +367 -0
- package/bin/skills/scientific-writing/SKILL.md +714 -0
- package/bin/skills/scientific-writing/assets/REPORT_FORMATTING_GUIDE.md +574 -0
- package/bin/skills/scientific-writing/assets/scientific_report.sty +606 -0
- package/bin/skills/scientific-writing/assets/scientific_report_template.tex +449 -0
- package/bin/skills/scientific-writing/references/citation_styles.md +720 -0
- package/bin/skills/scientific-writing/references/figures_tables.md +806 -0
- package/bin/skills/scientific-writing/references/imrad_structure.md +686 -0
- package/bin/skills/scientific-writing/references/professional_report_formatting.md +664 -0
- package/bin/skills/scientific-writing/references/reporting_guidelines.md +748 -0
- package/bin/skills/scientific-writing/references/writing_principles.md +824 -0
- package/bin/skills/tinker/SKILL.md +2 -3
- package/bin/skills/together-ai/SKILL.md +722 -0
- package/bin/skills/treatment-plans/README.md +488 -0
- package/bin/skills/treatment-plans/SKILL.md +1579 -0
- package/bin/skills/treatment-plans/assets/STYLING_QUICK_REFERENCE.md +185 -0
- package/bin/skills/treatment-plans/assets/chronic_disease_management_plan.tex +665 -0
- package/bin/skills/treatment-plans/assets/general_medical_treatment_plan.tex +547 -0
- package/bin/skills/treatment-plans/assets/medical_treatment_plan.sty +222 -0
- package/bin/skills/treatment-plans/assets/mental_health_treatment_plan.tex +774 -0
- package/bin/skills/treatment-plans/assets/one_page_treatment_plan.tex +193 -0
- package/bin/skills/treatment-plans/assets/pain_management_plan.tex +799 -0
- package/bin/skills/treatment-plans/assets/perioperative_care_plan.tex +753 -0
- package/bin/skills/treatment-plans/assets/quality_checklist.md +471 -0
- package/bin/skills/treatment-plans/assets/rehabilitation_treatment_plan.tex +756 -0
- package/bin/skills/treatment-plans/references/goal_setting_frameworks.md +411 -0
- package/bin/skills/treatment-plans/references/intervention_guidelines.md +507 -0
- package/bin/skills/treatment-plans/references/regulatory_compliance.md +476 -0
- package/bin/skills/treatment-plans/references/specialty_specific_guidelines.md +655 -0
- package/bin/skills/treatment-plans/references/treatment_plan_standards.md +485 -0
- package/bin/skills/treatment-plans/scripts/check_completeness.py +322 -0
- package/bin/skills/treatment-plans/scripts/generate_template.py +233 -0
- package/bin/skills/treatment-plans/scripts/timeline_generator.py +385 -0
- package/bin/skills/treatment-plans/scripts/validate_treatment_plan.py +369 -0
- package/bin/skills/unsloth/SKILL.md +565 -47
- package/bin/skills/unsloth/docs/advanced-rl.md +222 -0
- package/bin/skills/unsloth/docs/chat-templates.md +141 -0
- package/bin/skills/unsloth/docs/datasets.md +489 -0
- package/bin/skills/unsloth/docs/docker-extended.md +99 -0
- package/bin/skills/unsloth/docs/dynamic-ggufs-2.0.md +116 -0
- package/bin/skills/unsloth/docs/dynamic-ggufs-aider.md +118 -0
- package/bin/skills/unsloth/docs/faq.md +91 -0
- package/bin/skills/unsloth/docs/fp16-vs-bf16.md +61 -0
- package/bin/skills/unsloth/docs/fp8-rl.md +224 -0
- package/bin/skills/unsloth/docs/glm-4.7-flash.md +997 -0
- package/bin/skills/unsloth/docs/inference-deployment-overview.md +17 -0
- package/bin/skills/unsloth/docs/inference.md +27 -0
- package/bin/skills/unsloth/docs/installation-docker.md +155 -0
- package/bin/skills/unsloth/docs/installation-pip.md +148 -0
- package/bin/skills/unsloth/docs/kernels-packing.md +190 -0
- package/bin/skills/unsloth/docs/kimi-k2.5.md +634 -0
- package/bin/skills/unsloth/docs/lm-studio.md +235 -0
- package/bin/skills/unsloth/docs/lora-hot-swapping.md +75 -0
- package/bin/skills/unsloth/docs/lora-hyperparameters.md +363 -0
- package/bin/skills/unsloth/docs/memory-efficient-rl.md +267 -0
- package/bin/skills/unsloth/docs/model-selection.md +70 -0
- package/bin/skills/unsloth/docs/models.md +532 -0
- package/bin/skills/unsloth/docs/multi-gpu-ddp.md +90 -0
- package/bin/skills/unsloth/docs/notebooks.md +223 -0
- package/bin/skills/unsloth/docs/overview.md +110 -0
- package/bin/skills/unsloth/docs/qwen3-coder-next-extended.md +900 -0
- package/bin/skills/unsloth/docs/qwen3-coder-next.md +900 -0
- package/bin/skills/unsloth/docs/requirements.md +45 -0
- package/bin/skills/unsloth/docs/reward-hacking.md +25 -0
- package/bin/skills/unsloth/docs/saving-to-gguf.md +138 -0
- package/bin/skills/unsloth/docs/saving-to-ollama.md +46 -0
- package/bin/skills/unsloth/docs/sglang-guide.md +278 -0
- package/bin/skills/unsloth/docs/speculative-decoding.md +70 -0
- package/bin/skills/unsloth/docs/tool-calling.md +334 -0
- package/bin/skills/unsloth/docs/troubleshooting-faq.md +204 -0
- package/bin/skills/unsloth/docs/troubleshooting-inference.md +26 -0
- package/bin/skills/unsloth/docs/tts-fine-tuning.md +149 -0
- package/bin/skills/unsloth/docs/tutorial-grpo.md +273 -0
- package/bin/skills/unsloth/docs/tutorial-llama3-ollama.md +356 -0
- package/bin/skills/unsloth/docs/vision-fine-tuning.md +135 -0
- package/bin/skills/unsloth/docs/vision-rl.md +170 -0
- package/bin/skills/unsloth/docs/vllm-engine-arguments.md +43 -0
- package/bin/skills/unsloth/docs/vllm-guide.md +98 -0
- package/bin/skills/venue-templates/SKILL.md +686 -0
- package/bin/skills/venue-templates/assets/examples/cell_summary_example.md +247 -0
- package/bin/skills/venue-templates/assets/examples/medical_structured_abstract.md +313 -0
- package/bin/skills/venue-templates/assets/examples/nature_abstract_examples.md +213 -0
- package/bin/skills/venue-templates/assets/examples/neurips_introduction_example.md +245 -0
- package/bin/skills/venue-templates/assets/grants/nih_specific_aims.tex +235 -0
- package/bin/skills/venue-templates/assets/grants/nsf_proposal_template.tex +375 -0
- package/bin/skills/venue-templates/assets/journals/nature_article.tex +171 -0
- package/bin/skills/venue-templates/assets/journals/neurips_article.tex +283 -0
- package/bin/skills/venue-templates/assets/journals/plos_one.tex +317 -0
- package/bin/skills/venue-templates/assets/posters/beamerposter_academic.tex +311 -0
- package/bin/skills/venue-templates/references/cell_press_style.md +483 -0
- package/bin/skills/venue-templates/references/conferences_formatting.md +564 -0
- package/bin/skills/venue-templates/references/cs_conference_style.md +463 -0
- package/bin/skills/venue-templates/references/grants_requirements.md +787 -0
- package/bin/skills/venue-templates/references/journals_formatting.md +486 -0
- package/bin/skills/venue-templates/references/medical_journal_styles.md +535 -0
- package/bin/skills/venue-templates/references/ml_conference_style.md +556 -0
- package/bin/skills/venue-templates/references/nature_science_style.md +405 -0
- package/bin/skills/venue-templates/references/posters_guidelines.md +628 -0
- package/bin/skills/venue-templates/references/reviewer_expectations.md +417 -0
- package/bin/skills/venue-templates/references/venue_writing_styles.md +321 -0
- package/bin/skills/venue-templates/scripts/customize_template.py +195 -0
- package/bin/skills/venue-templates/scripts/query_template.py +266 -0
- package/bin/skills/venue-templates/scripts/validate_format.py +250 -0
- package/bin/synsc +0 -0
- package/package.json +1 -1
- package/bin/skills/unsloth/references/index.md +0 -7
- package/bin/skills/unsloth/references/llms-full.md +0 -16799
- package/bin/skills/unsloth/references/llms-txt.md +0 -12044
- package/bin/skills/unsloth/references/llms.md +0 -82
|
@@ -0,0 +1,214 @@
|
|
|
1
|
+
#!/bin/bash
|
|
2
|
+
|
|
3
|
+
# Poster PDF Quality Check Script
|
|
4
|
+
# Usage: ./review_poster.sh poster.pdf
|
|
5
|
+
|
|
6
|
+
# Colors for output
|
|
7
|
+
RED='\033[0;31m'
|
|
8
|
+
GREEN='\033[0;32m'
|
|
9
|
+
YELLOW='\033[1;33m'
|
|
10
|
+
BLUE='\033[0;34m'
|
|
11
|
+
NC='\033[0m' # No Color
|
|
12
|
+
|
|
13
|
+
# Check if file argument provided
|
|
14
|
+
if [ $# -eq 0 ]; then
|
|
15
|
+
echo -e "${RED}Error: No file specified${NC}"
|
|
16
|
+
echo "Usage: $0 <poster.pdf>"
|
|
17
|
+
exit 1
|
|
18
|
+
fi
|
|
19
|
+
|
|
20
|
+
POSTER_FILE="$1"
|
|
21
|
+
|
|
22
|
+
# Check if file exists
|
|
23
|
+
if [ ! -f "$POSTER_FILE" ]; then
|
|
24
|
+
echo -e "${RED}Error: File '$POSTER_FILE' not found${NC}"
|
|
25
|
+
exit 1
|
|
26
|
+
fi
|
|
27
|
+
|
|
28
|
+
echo -e "${BLUE}═══════════════════════════════════════════════${NC}"
|
|
29
|
+
echo -e "${BLUE} Poster PDF Quality Check${NC}"
|
|
30
|
+
echo -e "${BLUE}═══════════════════════════════════════════════${NC}"
|
|
31
|
+
echo ""
|
|
32
|
+
echo -e "${GREEN}File:${NC} $POSTER_FILE"
|
|
33
|
+
echo ""
|
|
34
|
+
|
|
35
|
+
# Function to check if command exists
|
|
36
|
+
command_exists() {
|
|
37
|
+
command -v "$1" >/dev/null 2>&1
|
|
38
|
+
}
|
|
39
|
+
|
|
40
|
+
# 1. Page Size Check
|
|
41
|
+
echo -e "${YELLOW}[1] Page Dimensions:${NC}"
|
|
42
|
+
if command_exists pdfinfo; then
|
|
43
|
+
PAGE_SIZE=$(pdfinfo "$POSTER_FILE" 2>/dev/null | grep "Page size")
|
|
44
|
+
if [ -n "$PAGE_SIZE" ]; then
|
|
45
|
+
echo " $PAGE_SIZE"
|
|
46
|
+
|
|
47
|
+
# Extract dimensions and check common sizes
|
|
48
|
+
WIDTH=$(echo "$PAGE_SIZE" | awk '{print $3}')
|
|
49
|
+
HEIGHT=$(echo "$PAGE_SIZE" | awk '{print $5}')
|
|
50
|
+
|
|
51
|
+
# Check against common poster sizes (approximate)
|
|
52
|
+
if [ "$WIDTH" = "2384" ] && [ "$HEIGHT" = "3370" ]; then
|
|
53
|
+
echo -e " ${GREEN}✓ Detected: A0 Portrait${NC}"
|
|
54
|
+
elif [ "$WIDTH" = "3370" ] && [ "$HEIGHT" = "2384" ]; then
|
|
55
|
+
echo -e " ${GREEN}✓ Detected: A0 Landscape${NC}"
|
|
56
|
+
elif [ "$WIDTH" = "1684" ] && [ "$HEIGHT" = "2384" ]; then
|
|
57
|
+
echo -e " ${GREEN}✓ Detected: A1 Portrait${NC}"
|
|
58
|
+
elif [ "$WIDTH" = "2592" ] && [ "$HEIGHT" = "3456" ]; then
|
|
59
|
+
echo -e " ${GREEN}✓ Detected: 36×48 inches Portrait${NC}"
|
|
60
|
+
else
|
|
61
|
+
echo -e " ${YELLOW}⚠ Non-standard size detected${NC}"
|
|
62
|
+
fi
|
|
63
|
+
else
|
|
64
|
+
echo -e " ${RED}✗ Could not extract page size${NC}"
|
|
65
|
+
fi
|
|
66
|
+
else
|
|
67
|
+
echo -e " ${YELLOW}⚠ pdfinfo not installed (install: brew install poppler or apt-get install poppler-utils)${NC}"
|
|
68
|
+
fi
|
|
69
|
+
echo ""
|
|
70
|
+
|
|
71
|
+
# 2. Page Count
|
|
72
|
+
echo -e "${YELLOW}[2] Page Count:${NC}"
|
|
73
|
+
if command_exists pdfinfo; then
|
|
74
|
+
PAGE_COUNT=$(pdfinfo "$POSTER_FILE" 2>/dev/null | grep "Pages" | awk '{print $2}')
|
|
75
|
+
if [ "$PAGE_COUNT" = "1" ]; then
|
|
76
|
+
echo -e " ${GREEN}✓ Single page (correct for poster)${NC}"
|
|
77
|
+
else
|
|
78
|
+
echo -e " ${RED}✗ Multiple pages detected: $PAGE_COUNT${NC}"
|
|
79
|
+
echo -e " ${YELLOW} Posters should be single page${NC}"
|
|
80
|
+
fi
|
|
81
|
+
else
|
|
82
|
+
echo -e " ${YELLOW}⚠ pdfinfo not installed${NC}"
|
|
83
|
+
fi
|
|
84
|
+
echo ""
|
|
85
|
+
|
|
86
|
+
# 3. File Size
|
|
87
|
+
echo -e "${YELLOW}[3] File Size:${NC}"
|
|
88
|
+
if command_exists ls; then
|
|
89
|
+
FILE_SIZE=$(ls -lh "$POSTER_FILE" | awk '{print $5}')
|
|
90
|
+
FILE_SIZE_BYTES=$(ls -l "$POSTER_FILE" | awk '{print $5}')
|
|
91
|
+
echo " Size: $FILE_SIZE"
|
|
92
|
+
|
|
93
|
+
# Check if file is too large for email
|
|
94
|
+
if [ "$FILE_SIZE_BYTES" -gt 52428800 ]; then # 50MB
|
|
95
|
+
echo -e " ${YELLOW}⚠ Large file (>50MB) - may need compression for email${NC}"
|
|
96
|
+
echo -e " ${BLUE} Compress with: gs -sDEVICE=pdfwrite -dPDFSETTINGS=/printer -dNOPAUSE -dQUIET -dBATCH -sOutputFile=compressed.pdf $POSTER_FILE${NC}"
|
|
97
|
+
elif [ "$FILE_SIZE_BYTES" -lt 1048576 ]; then # 1MB
|
|
98
|
+
echo -e " ${YELLOW}⚠ Small file - check image quality${NC}"
|
|
99
|
+
else
|
|
100
|
+
echo -e " ${GREEN}✓ Reasonable file size${NC}"
|
|
101
|
+
fi
|
|
102
|
+
fi
|
|
103
|
+
echo ""
|
|
104
|
+
|
|
105
|
+
# 4. Font Embedding Check
|
|
106
|
+
echo -e "${YELLOW}[4] Font Embedding:${NC}"
|
|
107
|
+
if command_exists pdffonts; then
|
|
108
|
+
echo " Checking first 20 fonts..."
|
|
109
|
+
FONT_OUTPUT=$(pdffonts "$POSTER_FILE" 2>/dev/null | head -21)
|
|
110
|
+
echo "$FONT_OUTPUT" | tail -20 | while IFS= read -r line; do
|
|
111
|
+
echo " $line"
|
|
112
|
+
done
|
|
113
|
+
|
|
114
|
+
# Check for non-embedded fonts
|
|
115
|
+
NON_EMBEDDED=$(echo "$FONT_OUTPUT" | tail -n +3 | awk '{if ($4 == "no") print $0}')
|
|
116
|
+
if [ -n "$NON_EMBEDDED" ]; then
|
|
117
|
+
echo -e " ${RED}✗ Some fonts are NOT embedded (printing may fail)${NC}"
|
|
118
|
+
echo -e " ${BLUE} Fix: Recompile with 'pdflatex -dEmbedAllFonts=true poster.tex'${NC}"
|
|
119
|
+
else
|
|
120
|
+
echo -e " ${GREEN}✓ All fonts appear to be embedded${NC}"
|
|
121
|
+
fi
|
|
122
|
+
else
|
|
123
|
+
echo -e " ${YELLOW}⚠ pdffonts not installed (install: brew install poppler or apt-get install poppler-utils)${NC}"
|
|
124
|
+
fi
|
|
125
|
+
echo ""
|
|
126
|
+
|
|
127
|
+
# 5. Image Quality Check
|
|
128
|
+
echo -e "${YELLOW}[5] Image Quality:${NC}"
|
|
129
|
+
if command_exists pdfimages; then
|
|
130
|
+
IMAGE_COUNT=$(pdfimages -list "$POSTER_FILE" 2>/dev/null | tail -n +3 | wc -l | tr -d ' ')
|
|
131
|
+
if [ "$IMAGE_COUNT" -gt 0 ]; then
|
|
132
|
+
echo " Found $IMAGE_COUNT image(s)"
|
|
133
|
+
echo " Image details:"
|
|
134
|
+
pdfimages -list "$POSTER_FILE" 2>/dev/null | head -20
|
|
135
|
+
|
|
136
|
+
# Note: DPI calculation would require page size knowledge
|
|
137
|
+
echo -e " ${BLUE} Verify images are at least 300 DPI for printing${NC}"
|
|
138
|
+
echo -e " ${BLUE} Formula: DPI = pixels / (inches in poster)${NC}"
|
|
139
|
+
else
|
|
140
|
+
echo -e " ${YELLOW}⚠ No images found${NC}"
|
|
141
|
+
fi
|
|
142
|
+
else
|
|
143
|
+
echo -e " ${YELLOW}⚠ pdfimages not installed (install: brew install poppler or apt-get install poppler-utils)${NC}"
|
|
144
|
+
fi
|
|
145
|
+
echo ""
|
|
146
|
+
|
|
147
|
+
# 6. Manual Checks Required
|
|
148
|
+
echo -e "${YELLOW}[6] Manual Visual Inspection Required:${NC}"
|
|
149
|
+
echo ""
|
|
150
|
+
echo -e "${BLUE}Layout and Spacing:${NC}"
|
|
151
|
+
echo " [ ] Content fills entire page (no large white margins)"
|
|
152
|
+
echo " [ ] Consistent spacing between columns"
|
|
153
|
+
echo " [ ] Consistent spacing between blocks/sections"
|
|
154
|
+
echo " [ ] All elements aligned properly"
|
|
155
|
+
echo " [ ] No overlapping text or figures"
|
|
156
|
+
echo ""
|
|
157
|
+
|
|
158
|
+
echo -e "${BLUE}Typography:${NC}"
|
|
159
|
+
echo " [ ] Title visible and large (72pt+)"
|
|
160
|
+
echo " [ ] Section headers readable (48-72pt)"
|
|
161
|
+
echo " [ ] Body text readable (24-36pt minimum)"
|
|
162
|
+
echo " [ ] No text cutoff or running off edges"
|
|
163
|
+
echo " [ ] Consistent font usage"
|
|
164
|
+
echo ""
|
|
165
|
+
|
|
166
|
+
echo -e "${BLUE}Visual Elements:${NC}"
|
|
167
|
+
echo " [ ] All figures display correctly"
|
|
168
|
+
echo " [ ] No pixelated or blurry images"
|
|
169
|
+
echo " [ ] Figure captions present and readable"
|
|
170
|
+
echo " [ ] Colors render as expected"
|
|
171
|
+
echo " [ ] Logos display clearly"
|
|
172
|
+
echo " [ ] QR codes visible and scannable"
|
|
173
|
+
echo ""
|
|
174
|
+
|
|
175
|
+
echo -e "${BLUE}Content:${NC}"
|
|
176
|
+
echo " [ ] All sections present (Intro, Methods, Results, Conclusions)"
|
|
177
|
+
echo " [ ] References included"
|
|
178
|
+
echo " [ ] Contact information visible"
|
|
179
|
+
echo " [ ] No placeholder text (Lorem ipsum, TODO, etc.)"
|
|
180
|
+
echo ""
|
|
181
|
+
|
|
182
|
+
# 7. Recommended Tests
|
|
183
|
+
echo -e "${YELLOW}[7] Recommended Next Steps:${NC}"
|
|
184
|
+
echo ""
|
|
185
|
+
echo -e "${BLUE}Test Print:${NC}"
|
|
186
|
+
echo " • Print at 25% scale (A0→A4, 36×48→Letter)"
|
|
187
|
+
echo " • Check readability from 2-3 feet"
|
|
188
|
+
echo " • Verify colors printed accurately"
|
|
189
|
+
echo ""
|
|
190
|
+
|
|
191
|
+
echo -e "${BLUE}Digital Checks:${NC}"
|
|
192
|
+
echo " • View at 100% zoom in PDF viewer"
|
|
193
|
+
echo " • Test on different screens/devices"
|
|
194
|
+
echo " • Verify QR codes work with scanner app"
|
|
195
|
+
echo ""
|
|
196
|
+
|
|
197
|
+
echo -e "${BLUE}Proofreading:${NC}"
|
|
198
|
+
echo " • Spell-check all text"
|
|
199
|
+
echo " • Verify author names and affiliations"
|
|
200
|
+
echo " • Confirm all statistics and numbers"
|
|
201
|
+
echo " • Ask colleague to review"
|
|
202
|
+
echo ""
|
|
203
|
+
|
|
204
|
+
# 8. Summary
|
|
205
|
+
echo -e "${BLUE}═══════════════════════════════════════════════${NC}"
|
|
206
|
+
echo -e "${BLUE} Quality Check Complete${NC}"
|
|
207
|
+
echo -e "${BLUE}═══════════════════════════════════════════════${NC}"
|
|
208
|
+
echo ""
|
|
209
|
+
echo -e "Review the checks above and complete manual verification."
|
|
210
|
+
echo -e "For full checklist, see: ${BLUE}assets/poster_quality_checklist.md${NC}"
|
|
211
|
+
echo ""
|
|
212
|
+
|
|
213
|
+
exit 0
|
|
214
|
+
|