@sushanglewis/lincoln 1.6.3 → 1.7.0

package/framework/manifest.json

@@ -1,6 +1,6 @@
 {
-  "version": "1.6.3",
-  "generatedAt": "2026-08-15T07:56:15.597Z",
+  "version": "1.7.0",
+  "generatedAt": "2026-09-07T14:48:46.564Z",
   "files": [
     {
       "path": ".claude-plugin/hooks.json",
@@ -8,11 +8,11 @@
     },
     {
       "path": ".claude-plugin/marketplace.json",
-      "sha256": "ca2c4d46391a9f74e7b516169ee0c4dc2053e39b166604b4765bf5301dc8d9fb"
+      "sha256": "5dc4fba17ae11c15bcfe85a416f2f723233cb6ccb02a6a6281476eede2aace54"
     },
     {
       "path": ".claude-plugin/plugin.json",
-      "sha256": "63d7a6191340cd49f78cddb78585849b88870e5969b8d5c4d830d81adaa4ba30"
+      "sha256": "3db704b95c999bf6fcc48498e18b336e297aa2c047d9a37bebfe54d4d515412d"
     },
     {
       "path": ".claude/agents/architect.md",
@@ -56,7 +56,7 @@
     },
     {
       "path": ".claude/agents/pm.md",
-      "sha256": "82502490bae859380f1ed99da890f18a061a4560f31cf22fdf128fb1942536f2"
+      "sha256": "75e9481a9bb0b87fd051416f1680f748ddd62e61209c29697acb589fbbb11fa1"
     },
     {
       "path": ".claude/agents/qa.md",
@@ -70,37 +70,45 @@
       "path": ".claude/agents/researcher.md",
       "sha256": "11a9f3b232c84a4d5d13b42a2ade3beaafe04b708a53836b54226b49e79a9eaa"
     },
+    {
+      "path": ".claude/agents/security-reviewer.md",
+      "sha256": "7bd26aa4ef4ce4a49d81b339799ac9028a29bcdb661d220ac0967b38b307c7d3"
+    },
     {
       "path": ".claude/harnesses/claude-code.yaml",
       "sha256": "4822f694dfe0a8e0edbb3dc552e5799f62e75ec104bc54bd7aea457445ef9516"
     },
     {
       "path": ".claude/harnesses/codex.yaml",
-      "sha256": "cf4834565c709ada29466ea3830d01ef892d2f6c1094fe8590b75e7c9c1c0abf"
+      "sha256": "e62313a312ad0684235b9d392d8160784f266419a40848cbf608f8250d2ea7d3"
     },
     {
       "path": ".claude/harnesses/command-map.yaml",
-      "sha256": "c3cc07e5d4932c78ae074850d01e7c359a2a81694b3cef081c41aa268328b355"
+      "sha256": "f9f0ec19138399f98fb0064c0abf7490e7c0d1f1b933cef76468281c18cc4837"
     },
     {
       "path": ".claude/harnesses/opencode.yaml",
-      "sha256": "cea58942904b217cdbcb60f03d2083378d2fdaff3ec93f6562901c92cc7aea42"
+      "sha256": "c6c87806ca5a650fbb4163823e13c7a19342275814c2d675070fb7bbc1271edf"
     },
     {
       "path": ".claude/harnesses/scenarios.yaml",
       "sha256": "5964474167e47385bab0d821c62b147e3d574ab4acd99b0d45ae1bfb2dd82abf"
     },
+    {
+      "path": ".claude/hooks/hooks.yaml",
+      "sha256": "9905d44731e901651ea13c5a5ada9be6f9d72ddce07701d11773f13662bc68bb"
+    },
     {
       "path": ".claude/hooks/on-pr-event.sh",
       "sha256": "6fa72efc0e1d15e03b446ce57afbfacdc93e69ca480ba723f14aeb449a14c6d6"
     },
     {
       "path": ".claude/hooks/on-session-start.sh",
-      "sha256": "b499b2db7340b12251d5bf33b919acd611f256a48824c8b3c197f20db680f291"
+      "sha256": "f92b3314fb391a25a69cf077e244e1e35c7b4cd6e2abd1f0f3671de85f8ac69d"
     },
     {
       "path": ".claude/hooks/on-stop.sh",
-      "sha256": "559456624263d75bf38e8aebe78afc7b6e75452131231a0a4a2a59e92485db64"
+      "sha256": "0e22d235ec64474136106610fef631fbe316117bd5e3ee642a8cce7c1afa1224"
     },
     {
       "path": ".claude/hooks/post-tool-use.sh",
@@ -108,7 +116,19 @@
     },
     {
       "path": ".claude/hooks/pre-tool-use.sh",
-      "sha256": "3814aaad9f3cf1af9d0bf76ffb640c19b796b03394de49f3b8c0d9d2c4226f6c"
+      "sha256": "51b29d7213486e9c7c24caebed34c82bbaee60c8a47a99537bf595a98519aa64"
+    },
+    {
+      "path": ".claude/mcp/mcp.yaml",
+      "sha256": "cabc65ab04e63bbff50d1afaa78f659f9208f40e4b8406ad4e648e87593d7f66"
+    },
+    {
+      "path": ".claude/policies/friction.yaml",
+      "sha256": "146af77dbfcdbe4c56aef082f770c8169d91b7574f78189326d965457403d6e8"
+    },
+    {
+      "path": ".claude/policies/security.yaml",
+      "sha256": "bd71fd2dd313e033d9248a0697f2b70cc5c6787b39cddb331c39c17f7fdc31cf"
     },
     {
       "path": ".claude/schemas/agent-definition.schema.json",
@@ -118,13 +138,17 @@
       "path": ".claude/schemas/benchmark-report.schema.json",
       "sha256": "20f841c9df884d75ad98342091cecc21c6f595f1f888c1ecf6e81f6c928ff8a0"
     },
+    {
+      "path": ".claude/schemas/design-review-feedback.json",
+      "sha256": "9cc405a54567e75ad7044ba92e26a83dda7b8e50248a6d519f6341115f55fe85"
+    },
     {
       "path": ".claude/schemas/pm-to-ux-handoff.schema.yaml",
       "sha256": "e721e86b5112ed5674267ba6a1fa2734c5bd5512a625dc7c7e7a5b9a545ec02e"
     },
     {
       "path": ".claude/schemas/stage-definition.schema.json",
-      "sha256": "f7a0ca9d84a16a28b7e6131e1d88b993cdad20bfe0701c91685fa01568151351"
+      "sha256": "5746190d5de63f7481bc161d4c6a301a43b776886b99ffb0c099609bb5422a05"
     },
     {
       "path": ".claude/schemas/workflow-stage.schema.json",
@@ -148,11 +172,11 @@
     },
     {
       "path": ".claude/skills/clarify-requirements/SKILL.md",
-      "sha256": "b1d79314ffa4a11b2072fac2da8483232f9d243eb23be00b2d8072b75f3d2916"
+      "sha256": "19810b312a6d4c4f6823936be1c66490b951fd4490a70aa4ac0962985f949bf1"
     },
     {
       "path": ".claude/skills/clarify-requirements/prompts/main.md",
-      "sha256": "8674c8ed0e3b345485e84b36d936109bcd4c95e0f8fe818845f6828bb4f0abfb"
+      "sha256": "57415b733f66c14529ff07754195bf0e28a7054b1f5917b69ef32bd63c3e9474"
     },
     {
       "path": ".claude/skills/dependencies.yaml",
@@ -376,7 +400,7 @@
     },
     {
       "path": ".claude/stages/clarify.yaml",
-      "sha256": "05e02ab354631cd982de039cd971b38d3ebe5f79a3ab119120495aa50a4bd9d1"
+      "sha256": "14d3ddb85431fb1800fff8794a6c6aeec378cc8e88bf458f7b593409b8380b1c"
     },
     {
       "path": ".claude/stages/explore-opensource.yaml",
@@ -430,6 +454,22 @@
       "path": ".claude/stages/lc-storytelling.yaml",
       "sha256": "3e7dd171db1074b322fb002e0882dd86f448450adb02f3ae6b084d531f9f9cc7"
     },
+    {
+      "path": ".claude/stages/phase-1-p0-design.yaml",
+      "sha256": "bbb434e64906b50a72560ecfa2b5a59b1432a02d7a024ebdf08095de89a55b32"
+    },
+    {
+      "path": ".claude/stages/phase-1-p0-implement.yaml",
+      "sha256": "07dd7b0c5a222b2ec45dfefc77d82703af8b135d89d68e6e13ad22356a4e7e63"
+    },
+    {
+      "path": ".claude/stages/phase-2-p1-design.yaml",
+      "sha256": "f96912b27df806f9c211665fce4615b5c3b57076b3c21a95d9cac90326f0e6de"
+    },
+    {
+      "path": ".claude/stages/phase-2-p1-implement.yaml",
+      "sha256": "a92d46dbeea087997f25b7dbe758072d09d3dd3892f1173acafb3231f774379b"
+    },
     {
       "path": ".claude/stages/product-design-docs.yaml",
       "sha256": "10d59c8d14e1f930c550ee7caa57eb636cfd162c040d406f980f173c17738e31"
@@ -478,9 +518,13 @@
       "path": ".claude/workflows/existing-project-iteration.yaml",
       "sha256": "027a27a493e1458549aaa66e2d8a139a86fe87d378f51b260f76a0ff7d159fea"
     },
+    {
+      "path": ".claude/workflows/framework-self-improvement.yaml",
+      "sha256": "665fae12ff61e3283cc18bb08a565ffa90f11daeb3810f7fed2ebf024ef36063"
+    },
     {
       "path": ".claude/workflows/interview-to-knowledge.yaml",
-      "sha256": "a511a3db4a27003e27296ed6ef672ae04da7054b039c13b56605079473159427"
+      "sha256": "d0aeb1f6f6ef09d86bbcd16d3e2945edfcaa590824bb3118bb999196ad37ef0e"
     },
     {
       "path": ".claude/workflows/oss-first-design.yaml",
@@ -492,7 +536,7 @@
     },
     {
       "path": ".version-bump.json",
-      "sha256": "4aa5a297bac44b5e8f0028cc96f3534ddbdef3b4272fd3cf7a96bd67a96a82b1"
+      "sha256": "a338d715d3c7d9cdee6740069fecc67bbda35f867b306dfe40b957eb99e8f100"
     },
     {
       "path": "CLAUDE.md",
@@ -508,19 +552,19 @@
     },
     {
       "path": "README.en.md",
-      "sha256": "72ece68f3810a6dbc1f4f74cc62c9f13382d84ae38d812eb8c72f01004e620c9"
+      "sha256": "5edfd7c89ebbf3a79bb5dffb142fd678f84fc3a534359c1ca0d48e68cab9a2bb"
     },
     {
       "path": "README.md",
-      "sha256": "6f6e6559fe4d57d8c9e0aeadf6f72033eccc3a6ff4cd0b1259e78c69274b05b3"
+      "sha256": "6271d86b4126d76177aefec1a8bb257d23f493505e7bffa04ca76266f2a92fe1"
     },
     {
       "path": "RELEASE.md",
-      "sha256": "f7148da3e458f91d315b2055aac358abfbd2755133de7441fcfcc3b336416fc2"
+      "sha256": "ca6640f4611391065b799f253dfddad939ff734689270e54f2e86d7b7fd2e0b7"
     },
     {
       "path": "SKILL.md",
-      "sha256": "3a134d4993407e3ac4dad0703c10585523bb1d096db588fbc9aaecda0a5c7ba8"
+      "sha256": "d005dc4a955fa334d5993403460cf00bf561a24be5c450fd0611f3301a8fdfc6"
     },
     {
       "path": "USAGE.md",
@@ -548,7 +592,7 @@
     },
     {
       "path": "scripts/check-harness-drift.sh",
-      "sha256": "f27599d7923b027984b3ad4aa85db53dac7898d6281cad06e940f141de05f2fb"
+      "sha256": "81f85c506e72a7a7b56e31c01cb15c0cdbffec1c0ccd3222b9bdad1d9385ba36"
     },
     {
       "path": "scripts/check-main-merge-hygiene.py",
@@ -584,7 +628,7 @@
     },
     {
       "path": "scripts/lincoln-setup.py",
-      "sha256": "67b783f85bb9ef64ad49482a626067b872b2dffbd8303555e962e4e44df075e6"
+      "sha256": "eb9705f2b2c6936e71d916b59d6bcd06fda638e94cb3f2a5718b7edbb2554ba4"
     },
     {
       "path": "scripts/lincoln-status.py",
@@ -610,6 +654,10 @@
       "path": "scripts/lincoln_command_map.py",
       "sha256": "c15cdeb303cd1aaa00527296bf7bab5e7b1b786ca4d292ee3b018e475a5a16a4"
     },
+    {
+      "path": "scripts/lincoln_condenser.py",
+      "sha256": "024a269863e6368de3879b31298421af22f5768d8be0e70f4c597b43382e1e28"
+    },
     {
       "path": "scripts/lincoln_dependency_manager.py",
       "sha256": "0b3ec944a2eb6c5f6e9c9dc975d4a6c297696f66b3291b3c73598611e50fc83e"
@@ -618,9 +666,13 @@
       "path": "scripts/lincoln_documents.py",
       "sha256": "0b0db078625daeff96423bca98b981464f5ecf68bf2ecce2370b1e8133daf968"
     },
+    {
+      "path": "scripts/lincoln_friction.py",
+      "sha256": "9ee0ec5218358f61dcd0bf9e0b7eb9525070d99c2fc5a979764927d6aea381d5"
+    },
     {
       "path": "scripts/lincoln_harness_adapter.py",
-      "sha256": "77d3339fb2519f7d058e75b657f3464fe0cb64854e925f337508a1b3348faeef"
+      "sha256": "a3a1453264f3fa4cc2aa97441ea29e1f411dcb10034715e534d40caaef0e7db7"
     },
     {
       "path": "scripts/lincoln_id.py",
@@ -630,6 +682,10 @@
       "path": "scripts/lincoln_index.py",
       "sha256": "5119c6f5211f5facfb9f66f61b07728a2b30c3b7596f2db3e5de8a97fb5ec84d"
     },
+    {
+      "path": "scripts/lincoln_mr_mine.py",
+      "sha256": "240d36d736e2391f88be571a9fad44c43c19038c66f946959b7d2a8a185c6b5a"
+    },
     {
       "path": "scripts/lincoln_paths.py",
       "sha256": "fe410358bd897be9a8f3c843f52c8f397736a0a7c681f887481ea9eeee8cc99c"
@@ -638,6 +694,10 @@
       "path": "scripts/lincoln_prd.py",
       "sha256": "6b9f1fe120ac1d4b07c4f3aeea18ac49c1f46a56da6b6541ca82ce8a15f80b47"
     },
+    {
+      "path": "scripts/lincoln_recall.py",
+      "sha256": "af8c81522d5352923ae88bc710cddb15a63742d9a654fdc958d9c14e60fe4532"
+    },
     {
       "path": "scripts/lincoln_render.py",
       "sha256": "0750b3cdcd77a0679e4dda626eebc0ab2bea90072d844e7979ac1c1365fa0800"
@@ -660,7 +720,7 @@
     },
     {
       "path": "scripts/lincoln_trace.py",
-      "sha256": "6c544548a6b0cce97d597503d4b4f11da33a3fcf16afc899f7e4c4e7192fe82c"
+      "sha256": "2bd5a87c4c5895b00e578fa15c8e408e285c0cd2024c7c718bd637952dd54b42"
     },
     {
       "path": "scripts/lincoln_workflow.py",
@@ -678,9 +738,13 @@
       "path": "scripts/run-infrastructure-tests.py",
       "sha256": "d2140224c7b07ae06d329f3e857733297a590878f67e4fe7f6b9d2d3db6e9375"
     },
+    {
+      "path": "scripts/security_analyzer.py",
+      "sha256": "b09e1ee3c543063cdbf1876ffca43c91d9c45a3a485550c919d87f2596ea47fa"
+    },
     {
       "path": "scripts/stage_loader.py",
-      "sha256": "9694ddc32f53d0eae5eabc55ed15ec5ddb5a2a5b813bcf2ea6c67f772d3e5f3f"
+      "sha256": "d089f2238b3a2c23d950f4c255e60070ef6c3c0eca6ed46de7f94fd19fa130c5"
     },
     {
       "path": "scripts/static-check.sh",
@@ -720,7 +784,7 @@
     },
     {
       "path": "tools/lincoln-installer/package.json",
-      "sha256": "3ec226b6929bdcc71e8da673d1570b2484ca6d720a4bb424f9aa4d646243da85"
+      "sha256": "a9cec32af90103609521e37484a847d14ebd2b2d096062349a398b4b9a84bc11"
     },
     {
       "path": "tools/lincoln-installer/src/cli.tsx",
@@ -1002,21 +1066,13 @@
       "path": "tools/lincoln/README.md",
       "sha256": "08e007598a46902ad4205f580b9af7a47973bab5d2bc543d0d39fe84d94baf04"
     },
-    {
-      "path": "tools/lincoln/dist/main.js",
-      "sha256": "27be36130341edba0c37782ab41d31331b5d9894454d2c7f45efe23d37e01fb5"
-    },
-    {
-      "path": "tools/lincoln/dist/main.js.map",
-      "sha256": "db7ba1724affeb15db717442d92e1e0ee5525a2423f57d7b69840ce6aaad78cd"
-    },
     {
       "path": "tools/lincoln/package-lock.json",
-      "sha256": "3ecae1e1e256eaf5ac2d0607124c1fcdc8a32dd64759eaa667c6359df9cce1b4"
+      "sha256": "39391a584993f28f83082ed36f141bd2f4b4807f54d6872421b21c6017917fc4"
     },
     {
       "path": "tools/lincoln/package.json",
-      "sha256": "42942e1ac7259b3062228a8acc60c3dff835be6ad15a828b92d9b8c6760f46ef"
+      "sha256": "a881553482f59d9c2767828cca1b2ad2b81c4efd987a3c86b14664ee4cf5b442"
     },
     {
       "path": "tools/lincoln/src/cli.tsx",

package/framework/scripts/check-harness-drift.sh

@@ -20,7 +20,7 @@ TMP="$(mktemp -d)"
 trap 'rm -rf "$TMP"' EXIT
 mkdir -p "$TMP/project" "$TMP/home"
 
-for HARNESS in codex opencode; do
+for HARNESS in claude-code codex opencode; do
     echo "==> Harness smoke generation: $HARNESS"
     if ! "$PYTHON" scripts/lincoln_harness_adapter.py \
         --harness "$HARNESS" --root "$ROOT" \
@@ -31,7 +31,17 @@ for HARNESS in codex opencode; do
     fi
 
     # Drift comparison only when artifacts were generated into the project.
+    # Claude Code uses .claude/ directly; its --check validates source files.
     case "$HARNESS" in
+        claude-code)
+            echo "==> Source consistency check: $HARNESS"
+            if ! "$PYTHON" scripts/lincoln_harness_adapter.py \
+                --harness "$HARNESS" --root "$ROOT" \
+                --project-dir "$ROOT" --home-dir "$HOME" --check; then
+                FAIL=1
+            fi
+            continue
+            ;;
         opencode) MARKER="$ROOT/.opencode" ;;
         codex)
             if [ -e "$ROOT/.codex-plugin" ]; then

package/framework/scripts/lincoln-setup.py

@@ -583,6 +583,20 @@ def _add_common_args(p: argparse.ArgumentParser) -> None:
     )
 
 
+
+def _load_dotenv(root: Path) -> None:
+    """Load environment variables from project root .env if python-dotenv is available."""
+    env_file = root / ".env"
+    if not env_file.exists():
+        return
+    try:
+        from dotenv import load_dotenv
+
+        load_dotenv(dotenv_path=env_file, override=False, verbose=False)
+    except ImportError:
+        # python-dotenv is optional; callers can export vars manually.
+        pass
+
 def main(args: list[str] | None = None) -> int:
     parser = argparse.ArgumentParser(
         prog="lc-setup",
@@ -632,6 +646,9 @@ def main(args: list[str] | None = None) -> int:
 
     parsed = parser.parse_args(args)
 
+    # Make .env variables available to install commands and harness adapters.
+    _load_dotenv(Path(parsed.root).resolve())
+
     handlers = {
         "check": run_check,
         "install-skills": run_install_skills,

package/framework/scripts/lincoln_condenser.py

@@ -0,0 +1,110 @@
+#!/usr/bin/env python3
+"""Lincoln trace condenser.
+
+Summarizes a window of trace events when the count exceeds a threshold. The
+summary is appended as a `condensation` event to the trace and returned to the
+caller (stage_loader handoff-report) for inclusion in handoff frontmatter.
+"""
+
+from __future__ import annotations
+
+import argparse
+import json
+import sys
+from collections import Counter
+from pathlib import Path
+from typing import Any
+
+_PROJECT_ROOT = Path(__file__).resolve().parents[1]
+if str(_PROJECT_ROOT) not in sys.path:
+    sys.path.insert(0, str(_PROJECT_ROOT))
+
+from scripts import lincoln_trace
+
+DEFAULT_THRESHOLD = 200
+
+
+def load_events(trace_file: Path, max_events: int = 10000) -> list[dict[str, Any]]:
+    if not trace_file.exists():
+        return []
+    try:
+        with open(trace_file, "r", encoding="utf-8") as fh:
+            lines = fh.readlines()
+        return [json.loads(line) for line in lines[-max_events:] if line.strip()]
+    except Exception:
+        return []
+
+
+def summarize(events: list[dict[str, Any]]) -> dict[str, Any]:
+    categories = Counter(e.get("category", "other") for e in events)
+    tools = Counter(e.get("tool", "") for e in events if e.get("category") == "tool")
+    stages = Counter(e.get("stage", "unknown") for e in events)
+    failed = sum(1 for e in events if e.get("exit_code", 0) != 0)
+    blocked = sum(
+        1 for e in events if e.get("args_summary", {}).get("blocked") is True
+    )
+
+    return {
+        "event_count": len(events),
+        "categories": dict(categories.most_common(10)),
+        "top_tools": dict(tools.most_common(10)),
+        "stages": dict(stages.most_common(10)),
+        "failed_count": failed,
+        "blocked_count": blocked,
+        "first_timestamp": events[0].get("timestamp") if events else None,
+        "last_timestamp": events[-1].get("timestamp") if events else None,
+    }
+
+
+def condense(
+    trace_file: Path,
+    threshold: int = DEFAULT_THRESHOLD,
+    dry_run: bool = False,
+) -> dict[str, Any] | None:
+    """Condense trace events if threshold is exceeded.
+
+    Returns the condensation summary or None when below threshold.
+    """
+    events = load_events(trace_file)
+    if len(events) < threshold:
+        return None
+
+    summary = summarize(events)
+    if not dry_run:
+        try:
+            lincoln_trace.append_event_to_file(
+                trace_file=trace_file,
+                category="condensation",
+                payload={
+                    "event_type": "condensation",
+                    "event_count": summary["event_count"],
+                    "threshold": threshold,
+                    "summary": summary,
+                },
+                run_id=events[-1].get("run_id") if events else None,
+                stage=events[-1].get("stage") if events else None,
+                node_id=events[-1].get("node_id") if events else None,
+            )
+        except Exception:
+            # Condensation must never block handoff report generation.
+            pass
+    return summary
+
+
+def main(argv: list[str] | None = None) -> int:
+    parser = argparse.ArgumentParser(description="Condense Lincoln trace events")
+    parser.add_argument("--trace-file", type=Path, required=True)
+    parser.add_argument("--threshold", type=int, default=DEFAULT_THRESHOLD)
+    parser.add_argument("--dry-run", action="store_true", default=False)
+    args = parser.parse_args(argv)
+
+    result = condense(args.trace_file, threshold=args.threshold, dry_run=args.dry_run)
+    if result is None:
+        print(json.dumps({"condensed": False}, ensure_ascii=False))
+    else:
+        print(json.dumps({"condensed": True, "summary": result}, ensure_ascii=False, indent=2))
+    return 0
+
+
+if __name__ == "__main__":
+    sys.exit(main())