@sudocode-ai/mcp 0.1.0 → 0.1.2

package/dist/client.js

@@ -0,0 +1,159 @@
+/**
+ * sudocode CLI client wrapper
+ *
+ * This module provides a client class that spawns `sudocode` CLI commands
+ * and parses their JSON output for use in MCP tools.
+ */
+import { spawn } from "child_process";
+import { fileURLToPath } from "url";
+import { dirname, join } from "path";
+import { existsSync } from "fs";
+import { SudocodeError } from "./types.js";
+export class SudocodeClient {
+    workingDir;
+    cliPath;
+    cliArgs;
+    dbPath;
+    versionChecked = false;
+    constructor(config) {
+        // Get working directory and expand variables if needed
+        let workingDir = config?.workingDir || process.env.SUDOCODE_WORKING_DIR || process.cwd();
+        // Fix unexpanded ${workspaceFolder} variable - use PWD or cwd() instead
+        if (workingDir === "${workspaceFolder}" || workingDir.includes("${")) {
+            workingDir = process.env.PWD || process.cwd();
+        }
+        this.workingDir = workingDir;
+        this.dbPath = config?.dbPath || process.env.SUDOCODE_DB;
+        // Auto-discover CLI path from node_modules or use configured/env path
+        const cliInfo = this.findCliPath();
+        this.cliPath = cliInfo.path;
+        this.cliArgs = cliInfo.args;
+    }
+    /**
+     * Find the CLI by looking in node_modules/@sudocode-ai/cli
+     * Since we added @sudocode-ai/cli as a dependency, it should be there
+     */
+    findCliPath() {
+        try {
+            const currentFile = fileURLToPath(import.meta.url);
+            const currentDir = dirname(currentFile);
+            // Look for @sudocode-ai/cli in various possible locations
+            const possiblePaths = [
+                // Workspace root node_modules (development)
+                join(currentDir, "..", "..", "node_modules", "@sudocode-ai", "cli", "dist", "cli.js"),
+                // Local package node_modules (when installed from npm)
+                join(currentDir, "..", "node_modules", "@sudocode-ai", "cli", "dist", "cli.js"),
+            ];
+            for (const cliJsPath of possiblePaths) {
+                if (existsSync(cliJsPath)) {
+                    // Return node + cli.js path instead of creating a wrapper
+                    return {
+                        path: process.execPath, // Use current node binary
+                        args: [cliJsPath], // Pass cli.js as first argument
+                    };
+                }
+            }
+        }
+        catch (error) {
+            // Ignore errors and fall back to 'sudocode' command
+        }
+        // Fall back to 'sudocode' command in PATH
+        return { path: "sudocode", args: [] };
+    }
+    /**
+     * Execute a CLI command and return parsed JSON output
+     */
+    async exec(args, options) {
+        // Check CLI version on first call
+        if (!this.versionChecked) {
+            await this.checkVersion();
+            this.versionChecked = true;
+        }
+        // Build command arguments - prepend cliArgs (e.g., cli.js path)
+        const cmdArgs = [...this.cliArgs, ...args];
+        // Add --json flag if not already present
+        if (!cmdArgs.includes("--json")) {
+            cmdArgs.push("--json");
+        }
+        // Add --db flag if dbPath is configured
+        if (this.dbPath && !cmdArgs.includes("--db")) {
+            cmdArgs.push("--db", this.dbPath);
+        }
+        return new Promise((resolve, reject) => {
+            const proc = spawn(this.cliPath, cmdArgs, {
+                cwd: this.workingDir,
+                env: process.env,
+            });
+            let stdout = "";
+            let stderr = "";
+            proc.stdout.on("data", (data) => {
+                stdout += data.toString();
+            });
+            proc.stderr.on("data", (data) => {
+                stderr += data.toString();
+            });
+            // Set timeout if specified
+            const timeout = options?.timeout || 30000; // Default 30s
+            const timer = setTimeout(() => {
+                proc.kill();
+                reject(new SudocodeError(`Command timed out after ${timeout}ms`, -1, "Timeout"));
+            }, timeout);
+            proc.on("close", (code) => {
+                clearTimeout(timer);
+                if (code !== 0) {
+                    reject(new SudocodeError(`CLI command failed with exit code ${code}`, code || -1, stderr));
+                    return;
+                }
+                // Parse JSON output
+                try {
+                    const result = JSON.parse(stdout);
+                    resolve(result);
+                }
+                catch (error) {
+                    reject(new SudocodeError(`Failed to parse JSON output: ${error instanceof Error ? error.message : String(error)}`, -1, stdout));
+                }
+            });
+            proc.on("error", (error) => {
+                clearTimeout(timer);
+                reject(new SudocodeError(`Failed to spawn CLI: ${error.message}`, -1, error.message));
+            });
+        });
+    }
+    /**
+     * Check that the CLI is installed and get its version
+     */
+    async checkVersion() {
+        try {
+            const proc = spawn(this.cliPath, [...this.cliArgs, "--version"], {
+                cwd: this.workingDir,
+            });
+            let stdout = "";
+            let stderr = "";
+            proc.stdout.on("data", (data) => {
+                stdout += data.toString();
+            });
+            proc.stderr.on("data", (data) => {
+                stderr += data.toString();
+            });
+            return new Promise((resolve, reject) => {
+                proc.on("close", (code) => {
+                    if (code !== 0) {
+                        reject(new SudocodeError(`CLI not found or failed to execute. Make sure 'sudocode' is installed and in your PATH.`, code || -1, stderr));
+                        return;
+                    }
+                    // Version output format: "sudocode version X.Y.Z" or just "X.Y.Z"
+                    const versionMatch = stdout.match(/(\d+\.\d+\.\d+)/);
+                    const version = versionMatch ? versionMatch[1] : stdout.trim();
+                    resolve({ version });
+                });
+                proc.on("error", () => {
+                    reject(new SudocodeError(`CLI not found at path: ${this.cliPath}. Make sure 'sudocode' is installed.`, -1, "CLI not found"));
+                });
+            });
+        }
+        catch (error) {
+            throw new SudocodeError(`Failed to check CLI version: ${error instanceof Error ? error.message : String(error)}`, -1, "");
+        }
+    }
+}
+//# sourceMappingURL=client.js.map

package/dist/client.js.map

@@ -0,0 +1 @@
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package/dist/index.js

@@ -1,49 +1,31 @@
 #!/usr/bin/env node
-import{Server as j}from"@modelcontextprotocol/sdk/server/index.js";import{StdioServerTransport as z}from"@modelcontextprotocol/sdk/server/stdio.js";import{CallToolRequestSchema as $,ListResourcesRequestSchema as N,ListToolsRequestSchema as H,ReadResourceRequestSchema as M}from"@modelcontextprotocol/sdk/types.js";import{spawn as w}from"child_process";import{fileURLToPath as E}from"url";import{dirname as R,join as b}from"path";import{existsSync as O}from"fs";var d=class extends Error{constructor(t,i,s){super(t);this.exitCode=i;this.stderr=s;this.name="SudocodeError"}};var l=class{workingDir;cliPath;cliArgs;dbPath;versionChecked=!1;constructor(e){let t=e?.workingDir||process.env.SUDOCODE_WORKING_DIR||process.cwd();(t==="${workspaceFolder}"||t.includes("${"))&&(t=process.env.PWD||process.cwd()),this.workingDir=t,this.dbPath=e?.dbPath||process.env.SUDOCODE_DB;let i=this.findCliPath();this.cliPath=i.path,this.cliArgs=i.args}findCliPath(){try{let e=E(import.meta.url),t=R(e),i=[b(t,"..","..","node_modules","@sudocode-ai","cli","dist","cli.js"),b(t,"..","node_modules","@sudocode-ai","cli","dist","cli.js")];for(let s of i)if(O(s))return{path:process.execPath,args:[s]}}catch{}return{path:"sudocode",args:[]}}async exec(e,t){this.versionChecked||(await this.checkVersion(),this.versionChecked=!0);let i=[...this.cliArgs,...e];return i.includes("--json")||i.push("--json"),this.dbPath&&!i.includes("--db")&&i.push("--db",this.dbPath),new Promise((s,n)=>{let o=w(this.cliPath,i,{cwd:this.workingDir,env:process.env}),c="",u="";o.stdout.on("data",a=>{c+=a.toString()}),o.stderr.on("data",a=>{u+=a.toString()});let g=t?.timeout||3e4,m=setTimeout(()=>{o.kill(),n(new d(`Command timed out after ${g}ms`,-1,"Timeout"))},g);o.on("close",a=>{if(clearTimeout(m),a!==0){n(new d(`CLI command failed with exit code ${a}`,a||-1,u));return}try{let p=JSON.parse(c);s(p)}catch(p){n(new d(`Failed to parse JSON output: ${p instanceof Error?p.message:String(p)}`,-1,c))}}),o.on("error",a=>{clearTimeout(m),n(new d(`Failed to spawn CLI: ${a.message}`,-1,a.message))})})}async checkVersion(){try{let e=w(this.cliPath,[...this.cliArgs,"--version"],{cwd:this.workingDir}),t="",i="";return e.stdout.on("data",s=>{t+=s.toString()}),e.stderr.on("data",s=>{i+=s.toString()}),new Promise((s,n)=>{e.on("close",o=>{if(o!==0){n(new d("CLI not found or failed to execute. Make sure 'sudocode' is installed and in your PATH.",o||-1,i));return}let c=t.match(/(\d+\.\d+\.\d+)/),u=c?c[1]:t.trim();s({version:u})}),e.on("error",()=>{n(new d(`CLI not found at path: ${this.cliPath}. Make sure 'sudocode' is installed.`,-1,"CLI not found"))})})}catch(e){throw new d(`Failed to check CLI version: ${e instanceof Error?e.message:String(e)}`,-1,"")}}};async function S(r,e={}){let t=await r.exec(["ready"]),i=await r.exec(["status"]);return t.issues&&Array.isArray(t.issues)&&(t.issues=t.issues.map(s=>{let{content:n,...o}=s;return o})),{ready:t,status:i}}async function k(r,e={}){let t=["issue","list"];e.status&&t.push("--status",e.status),e.priority!==void 0&&t.push("--priority",e.priority.toString()),e.limit!==void 0&&t.push("--limit",e.limit.toString()),e.search&&t.push("--grep",e.search);let i=e.archived!==void 0?e.archived:!1;t.push("--archived",i.toString());let s=await r.exec(t);return Array.isArray(s)?s.map(n=>{let{content:o,...c}=n;return c}):s}async function x(r,e){let t=["issue","show",e.issue_id];return r.exec(t)}async function v(r,e){if(!!e.issue_id){let i=["issue","update",e.issue_id];return e.status&&i.push("--status",e.status),e.priority!==void 0&&i.push("--priority",e.priority.toString()),e.title&&i.push("--title",e.title),e.description&&i.push("--description",e.description),e.archived!==void 0&&i.push("--archived",e.archived.toString()),r.exec(i)}else{if(!e.title)throw new Error("title is required when creating a new issue");let i=["issue","create",e.title];return e.description&&i.push("--description",e.description),e.priority!==void 0&&i.push("--priority",e.priority.toString()),e.parent&&i.push("--parent",e.parent),e.tags&&e.tags.length>0&&i.push("--tags",e.tags.join(",")),r.exec(i)}}async function _(r,e={}){let t=["spec","list"];e.limit!==void 0&&t.push("--limit",e.limit.toString()),e.search&&t.push("--grep",e.search);let i=e.archived!==void 0?e.archived:!1;t.push("--archived",i.toString());let s=await r.exec(t);return Array.isArray(s)?s.map(n=>{let{content:o,...c}=n;return c}):s}async function I(r,e){let t=["spec","show",e.spec_id];return r.exec(t)}async function P(r,e){if(!!e.spec_id){let i=["spec","update",e.spec_id];return e.title&&i.push("--title",e.title),e.priority!==void 0&&i.push("--priority",e.priority.toString()),e.description&&i.push("--description",e.description),e.parent!==void 0&&i.push("--parent",e.parent||""),e.tags!==void 0&&i.push("--tags",e.tags.join(",")),e.archived!==void 0&&i.push("--archived",e.archived.toString()),r.exec(i)}else{if(!e.title)throw new Error("title is required when creating a new spec");let i=["spec","create",e.title];return e.priority!==void 0&&i.push("--priority",e.priority.toString()),e.description&&i.push("--description",e.description),e.parent&&i.push("--parent",e.parent),e.tags&&e.tags.length>0&&i.push("--tags",e.tags.join(",")),r.exec(i)}}async function C(r,e){let t=["link",e.from_id,e.to_id];if(e.from_id===e.to_id)throw new Error("from_id and to_id cannot be the same");return e.type&&t.push("--type",e.type),r.exec(t)}async function D(r,e){let t=["feedback","add",e.issue_id,e.spec_id];return t.push("--content",e.content),e.type&&t.push("--type",e.type),e.line!==void 0&&t.push("--line",e.line.toString()),e.text&&t.push("--text",e.text),r.exec(t)}async function T(r,e){let t=i=>{let s=[i,"add-ref",e.entity_id,e.reference_id];return e.line!==void 0&&s.push("--line",e.line.toString()),e.text&&s.push("--text",e.text),e.display_text&&s.push("--display",e.display_text),e.relationship_type&&s.push("--type",e.relationship_type),e.format&&s.push("--format",e.format),e.position&&s.push("--position",e.position),s};try{return await r.exec(t("spec"))}catch{try{return await r.exec(t("issue"))}catch(s){throw s}}}import{existsSync as h}from"fs";import{join as f}from"path";var y=class{server;client;config;isInitialized=!1;constructor(e){this.config=e||{},this.server=new j({name:"sudocode",version:"0.1.0"},{capabilities:{tools:{},resources:{}}}),this.client=new l(e),this.setupHandlers()}setupHandlers(){this.server.setRequestHandler(H,async()=>({tools:[{name:"ready",description:"Find issues ready to work on (no blockers) and gets project status.",inputSchema:{type:"object",properties:{}}},{name:"list_issues",description:"List all issues with optional filters",inputSchema:{type:"object",properties:{status:{type:"string",enum:["open","in_progress","blocked","closed"],description:"Filter by status (optional)"},priority:{type:"number",description:"Filter by priority (0-4) (optional)"},archived:{type:"boolean",description:"Filter by archived status (optional, defaults to false to exclude archived)"},limit:{type:"number",description:"Max results (optional)",default:50},search:{type:"string",description:"Search issues by title or description (optional)"}}}},{name:"show_issue",description:"Show detailed issue information including relationships and feedback",inputSchema:{type:"object",properties:{issue_id:{type:"string",description:'Issue ID (e.g., "ISSUE-001")'}},required:["issue_id"]}},{name:"upsert_issue",description:"Create or update an issue. If issue_id is provided, updates the issue; otherwise creates a new one. To close an issue, set status='closed'. To archive an issue, set archived=true.",inputSchema:{type:"object",properties:{issue_id:{type:"string",description:"Issue ID (optional - if provided, updates the issue; if not, creates new)"},title:{type:"string",description:"Issue title (required for create, optional for update)"},description:{type:"string",description:"Issue descriptions. Supports inline references to other specs/issues by ID in Obsidian internal link format (e.g. `[[SPEC-002]]`)."},priority:{type:"number",description:"Priority (0-4, 0=highest) (optional)"},parent:{type:"string",description:"Parent issue ID (optional)"},tags:{type:"array",items:{type:"string"},description:"Tags (optional)"},status:{type:"string",enum:["open","in_progress","blocked","closed"],description:"Issue status (optional)"},archived:{type:"boolean",description:"Archive status (optional)"}}}},{name:"list_specs",description:"List all specs with optional filters",inputSchema:{type:"object",properties:{limit:{type:"number",description:"Max results (optional)",default:50},search:{type:"string",description:"Search specs by title or description (optional)"}}}},{name:"show_spec",description:"Show detailed spec information including all feedback anchored to the spec",inputSchema:{type:"object",properties:{spec_id:{type:"string",description:'Spec ID (e.g., "SPEC-001")'}},required:["spec_id"]}},{name:"upsert_spec",description:"Create a new spec (update not yet supported in CLI)",inputSchema:{type:"object",properties:{spec_id:{type:"string",description:"Spec ID (optional - if provided, updates the spec; if not, creates new)"},title:{type:"string",description:"Spec title (required for create)"},priority:{type:"number",description:"Priority (0-4, 0=highest) (optional)"},description:{type:"string",description:"Spec description (optional)"},parent:{type:"string",description:"Parent spec ID (optional)"},tags:{type:"array",items:{type:"string"},description:"Tags (optional)"}}}},{name:"link",description:"Create a relationship between two entities (specs or issues)",inputSchema:{type:"object",properties:{from_id:{type:"string",description:"Source entity ID"},to_id:{type:"string",description:"Target entity ID"},type:{type:"string",enum:["blocks","implements","references","depends-on","discovered-from","related"],description:"Relationship type"}},required:["from_id","to_id"]}},{name:"add_reference",description:"Add an inline cross-reference/mention to a spec or issue using Obsidian-style [[ID]] syntax. References are inserted at a specific location in the markdown content. Use this to add references to an issue or spec without having to modify the content directly.",inputSchema:{type:"object",properties:{entity_id:{type:"string",description:"Target entity ID (where to add the reference)"},reference_id:{type:"string",description:"ID to reference (e.g., ISSUE-001, SPEC-002)"},display_text:{type:"string",description:"Display text (optional)"},relationship_type:{type:"string",enum:["blocks","implements","references","depends-on","discovered-from","related"],description:"Relationship type (optional)"},line:{type:"number",description:"Line number to insert reference (use line OR text, not both)"},text:{type:"string",description:"Text to search for insertion point (use line OR text, not both)"},format:{type:"string",enum:["inline","newline"],description:"Format: inline (same line) or newline (new line)",default:"inline"}},required:["entity_id","reference_id"]}},{name:"add_feedback",description:"Provide anchored feedback to a spec. IMPORTANT: You MUST specify either 'line' OR 'text' to anchor the feedback to a specific location in the spec. ",inputSchema:{type:"object",properties:{issue_id:{type:"string",description:"Issue ID providing feedback (required for create)"},spec_id:{type:"string",description:"Spec ID receiving feedback (required for create)"},content:{type:"string",description:"Feedback content (required for create)"},type:{type:"string",enum:["comment","suggestion","request"],description:"Feedback type"},line:{type:"number",description:"Line number to anchor feedback (REQUIRED: must use either 'line' OR 'text', not both). Use this if you know the exact line number in the spec markdown file."},text:{type:"string",description:"Text snippet to anchor feedback (REQUIRED: must use either 'line' OR 'text', not both). Must be an EXACT substring match from the spec content - case-sensitive and whitespace-sensitive. Use show_spec first to see the exact content and copy the text precisely."}}}}]})),this.server.setRequestHandler($,async e=>{let{name:t,arguments:i}=e.params;if(!this.isInitialized)return{content:[{type:"text",text:`\u26A0\uFE0F  sudocode is not initialized in this directory.
-
-Working directory: ${this.client.workingDir||process.cwd()}
-
-Please run 'sudocode init' in your project root first.`}],isError:!0};try{let s;switch(t){case"ready":s=await S(this.client,i);break;case"list_issues":s=await k(this.client,i);break;case"show_issue":s=await x(this.client,i);break;case"upsert_issue":s=await v(this.client,i);break;case"list_specs":s=await _(this.client,i);break;case"show_spec":s=await I(this.client,i);break;case"upsert_spec":s=await P(this.client,i);break;case"link":s=await C(this.client,i);break;case"add_reference":s=await T(this.client,i);break;case"add_feedback":s=await D(this.client,i);break;default:throw new Error(`Unknown tool: ${t}`)}return{content:[{type:"text",text:JSON.stringify(s,null,2)}]}}catch(s){let n=`Error: ${s instanceof Error?s.message:String(s)}`;return s instanceof Error&&"stderr"in s&&s.stderr&&(n+=`
-
-Stderr:
-${s.stderr}`),{content:[{type:"text",text:n}],isError:!0}}}),this.server.setRequestHandler(N,async()=>({resources:[{uri:"sudocode://quickstart",name:"sudocode Quickstart Guide",description:"Introduction to sudocode workflow and best practices for agents",mimeType:"text/markdown"}]})),this.server.setRequestHandler(M,async e=>{let{uri:t}=e.params;if(t==="sudocode://quickstart")return{contents:[{uri:t,mimeType:"text/markdown",text:`# sudocode Quickstart
-
-sudocode is a git-native spec and issue management system designed for AI-assisted development.
-
-## Core Concepts
-
-**Specs**: Technical specifications stored as markdown files
-- Types: architecture, api, database, feature, research
-- Status: draft \u2192 review \u2192 approved \u2192 deprecated
-- Each spec has a unique ID (e.g., SPEC-001) and file path
-
-**Issues**: Work items tracked in the database
-- Types: bug, feature, task, epic, chore
-- Status: open \u2192 in_progress \u2192 blocked \u2192 closed
-- Can reference and implement specs
-
-**Feedback**: Issues can provide anchored feedback on specs
-- Anchors track specific lines/sections in spec markdown
-- Auto-relocates when specs change (smart anchoring)
-- Types: comment, suggestion, request
-
-## Typical Workflow
-
-1. **Check ready work**: \`ready\` tool to find tasks with no blockers
-2. **Claim work**: \`update_issue\` with status=in_progress
-3. **Review specs**: \`show_spec\` to understand requirements
-4. **Provide feedback**: \`add_feedback\` when specs are unclear
-5. **Complete work**: \`close_issue\` when done
-6. **Link entities**: Use \`link\` to create relationships
-
-## Relationship Types
-- \`blocks\`: Hard blocker (to_id must complete before from_id)
-- \`implements\`: Issue implements a spec
-- \`references\`: Soft reference
-- \`depends-on\`: General dependency
-- \`discovered-from\`: New work found during implementation
-- \`related\`: General relationship
-`}]};throw new Error(`Unknown resource: ${t}`)})}async checkForInit(){let e=this.client.workingDir||process.cwd(),t=f(e,".sudocode"),i=f(t,"cache.db"),s=f(t,"issues.jsonl"),n=f(t,"specs.jsonl");if(!h(t))return{initialized:!1,sudocodeExists:!1,message:"No .sudocode directory found"};if(!h(i))if(h(s)||h(n))try{return console.error("Found .sudocode directory but no cache.db, running import..."),await this.client.exec(["import"]),console.error("\u2713 Successfully imported data to cache.db"),{initialized:!0,sudocodeExists:!0,message:"Auto-imported from JSONL files"}}catch(o){return{initialized:!1,sudocodeExists:!0,message:`Failed to import: ${o instanceof Error?o.message:String(o)}`}}else try{return console.error("Found .sudocode directory but no issues.jsonl or specs.jsonl, running init..."),await this.client.exec(["init"]),console.error("\u2713 Successfully initialized sudocode"),await this.client.exec(["import"]),{initialized:!0,sudocodeExists:!0,message:"Initialized sudocode"}}catch(o){return{initialized:!1,sudocodeExists:!0,message:`Failed to initialize: ${o instanceof Error?o.message:String(o)}`}}return{initialized:!0,sudocodeExists:!0}}async checkInitialization(){let e=await this.checkForInit(),t=this.client.workingDir||process.cwd();e.initialized?(this.isInitialized=!0,console.error("\u2713 sudocode initialized successfully"),e.message&&console.error(`  ${e.message}`)):(this.isInitialized=!1,console.error(""),console.error("\u26A0\uFE0F  WARNING: sudocode is not initialized"),console.error(`   Working directory: ${t}`),console.error(""),e.sudocodeExists?(console.error(`   Issue: ${e.message}`),console.error("   The .sudocode directory exists but is incomplete."),console.error("   Try running:"),console.error("   $ sudocode import")):(console.error("   No .sudocode directory found."),console.error("   To initialize, run:"),console.error("   $ sudocode init")))}async run(){await this.checkInitialization();let e=new z;await this.server.connect(e),console.error("sudocode MCP server running on stdio")}};function W(){let r={},e=process.argv.slice(2);for(let t=0;t<e.length;t++){let i=e[t];switch(i){case"--working-dir":case"-w":r.workingDir=e[++t];break;case"--cli-path":r.cliPath=e[++t];break;case"--db-path":case"--db":r.dbPath=e[++t];break;case"--no-sync":r.syncOnStartup=!1;break;case"--help":case"-h":console.log(`
+/**
+ * sudocode MCP Server entry point
+ */
+import { SudocodeMCPServer } from "./server.js";
+function parseArgs() {
+    const config = {};
+    const args = process.argv.slice(2);
+    for (let i = 0; i < args.length; i++) {
+        const arg = args[i];
+        switch (arg) {
+            case "--working-dir":
+            case "-w":
+                config.workingDir = args[++i];
+                break;
+            case "--cli-path":
+                config.cliPath = args[++i];
+                break;
+            case "--db-path":
+            case "--db":
+                config.dbPath = args[++i];
+                break;
+            case "--no-sync":
+                config.syncOnStartup = false;
+                break;
+            case "--help":
+            case "-h":
+                console.log(`
 sudocode MCP Server
 
 Usage: sudocode-mcp [options]
@@ -59,5 +41,24 @@ Environment Variables:
   SUDOCODE_WORKING_DIR      Default working directory
   SUDOCODE_PATH             Default CLI path
   SUDOCODE_DB               Default database path
-        `),process.exit(0);break;default:console.error(`Unknown option: ${i}`),console.error("Use --help for usage information"),process.exit(1)}}return r}async function G(){let r=W();await new y(r).run()}G().catch(r=>{console.error("Fatal error:",r),process.exit(1)});
-//# sourceMappingURL=index.js.map
+        `);
+                process.exit(0);
+                break;
+            default:
+                console.error(`Unknown option: ${arg}`);
+                console.error("Use --help for usage information");
+                process.exit(1);
+        }
+    }
+    return config;
+}
+async function main() {
+    const config = parseArgs();
+    const server = new SudocodeMCPServer(config);
+    await server.run();
+}
+main().catch((error) => {
+    console.error("Fatal error:", error);
+    process.exit(1);
+});
+//# sourceMappingURL=index.js.map

package/dist/index.js.map

@@ -1,7 +1 @@
-{
-  "version": 3,
-  "sources": ["../src/server.ts", "../src/client.ts", "../src/types.ts", "../src/tools/issues.ts", "../src/tools/specs.ts", "../src/tools/relationships.ts", "../src/tools/feedback.ts", "../src/tools/references.ts", "../src/index.ts"],
-  "sourcesContent": ["/**\n * MCP Server for sudocode\n *\n * This module sets up the MCP server with tools and resources.\n */\n\nimport { Server } from \"@modelcontextprotocol/sdk/server/index.js\";\nimport { StdioServerTransport } from \"@modelcontextprotocol/sdk/server/stdio.js\";\nimport {\n  CallToolRequestSchema,\n  ListResourcesRequestSchema,\n  ListToolsRequestSchema,\n  ReadResourceRequestSchema,\n} from \"@modelcontextprotocol/sdk/types.js\";\nimport { SudocodeClient } from \"./client.js\";\nimport * as issueTools from \"./tools/issues.js\";\nimport * as specTools from \"./tools/specs.js\";\nimport * as relationshipTools from \"./tools/relationships.js\";\nimport * as feedbackTools from \"./tools/feedback.js\";\nimport * as referenceTools from \"./tools/references.js\";\nimport { SudocodeClientConfig } from \"./types.js\";\nimport { existsSync } from \"fs\";\nimport { join } from \"path\";\n\nexport class SudocodeMCPServer {\n  private server: Server;\n  private client: SudocodeClient;\n  private config: SudocodeClientConfig;\n  private isInitialized: boolean = false;\n\n  constructor(config?: SudocodeClientConfig) {\n    this.config = config || {};\n    this.server = new Server(\n      {\n        name: \"sudocode\",\n        version: \"0.1.0\",\n      },\n      {\n        capabilities: {\n          tools: {},\n          resources: {},\n        },\n      }\n    );\n\n    this.client = new SudocodeClient(config);\n    this.setupHandlers();\n  }\n\n  private setupHandlers() {\n    // List available tools\n    this.server.setRequestHandler(ListToolsRequestSchema, async () => {\n      return {\n        tools: [\n          {\n            name: \"ready\",\n            description:\n              \"Find issues ready to work on (no blockers) and gets project status.\",\n            inputSchema: {\n              type: \"object\",\n              properties: {},\n            },\n          },\n          {\n            name: \"list_issues\",\n            description: \"List all issues with optional filters\",\n            inputSchema: {\n              type: \"object\",\n              properties: {\n                status: {\n                  type: \"string\",\n                  enum: [\"open\", \"in_progress\", \"blocked\", \"closed\"],\n                  description: \"Filter by status (optional)\",\n                },\n                priority: {\n                  type: \"number\",\n                  description: \"Filter by priority (0-4) (optional)\",\n                },\n                archived: {\n                  type: \"boolean\",\n                  description:\n                    \"Filter by archived status (optional, defaults to false to exclude archived)\",\n                },\n                limit: {\n                  type: \"number\",\n                  description: \"Max results (optional)\",\n                  default: 50,\n                },\n                search: {\n                  type: \"string\",\n                  description:\n                    \"Search issues by title or description (optional)\",\n                },\n              },\n            },\n          },\n          {\n            name: \"show_issue\",\n            description:\n              \"Show detailed issue information including relationships and feedback\",\n            inputSchema: {\n              type: \"object\",\n              properties: {\n                issue_id: {\n                  type: \"string\",\n                  description: 'Issue ID (e.g., \"ISSUE-001\")',\n                },\n              },\n              required: [\"issue_id\"],\n            },\n          },\n          {\n            name: \"upsert_issue\",\n            description:\n              \"Create or update an issue. If issue_id is provided, updates the issue; otherwise creates a new one. To close an issue, set status='closed'. To archive an issue, set archived=true.\",\n            inputSchema: {\n              type: \"object\",\n              properties: {\n                issue_id: {\n                  type: \"string\",\n                  description:\n                    \"Issue ID (optional - if provided, updates the issue; if not, creates new)\",\n                },\n                title: {\n                  type: \"string\",\n                  description:\n                    \"Issue title (required for create, optional for update)\",\n                },\n                description: {\n                  type: \"string\",\n                  description:\n                    \"Issue descriptions. Supports inline references to other specs/issues by ID in Obsidian internal link format (e.g. `[[SPEC-002]]`).\",\n                },\n                priority: {\n                  type: \"number\",\n                  description: \"Priority (0-4, 0=highest) (optional)\",\n                },\n                parent: {\n                  type: \"string\",\n                  description: \"Parent issue ID (optional)\",\n                },\n                tags: {\n                  type: \"array\",\n                  items: { type: \"string\" },\n                  description: \"Tags (optional)\",\n                },\n                status: {\n                  type: \"string\",\n                  enum: [\"open\", \"in_progress\", \"blocked\", \"closed\"],\n                  description: \"Issue status (optional)\",\n                },\n                archived: {\n                  type: \"boolean\",\n                  description: \"Archive status (optional)\",\n                },\n              },\n            },\n          },\n          {\n            name: \"list_specs\",\n            description: \"List all specs with optional filters\",\n            inputSchema: {\n              type: \"object\",\n              properties: {\n                limit: {\n                  type: \"number\",\n                  description: \"Max results (optional)\",\n                  default: 50,\n                },\n                search: {\n                  type: \"string\",\n                  description:\n                    \"Search specs by title or description (optional)\",\n                },\n              },\n            },\n          },\n          {\n            name: \"show_spec\",\n            description:\n              \"Show detailed spec information including all feedback anchored to the spec\",\n            inputSchema: {\n              type: \"object\",\n              properties: {\n                spec_id: {\n                  type: \"string\",\n                  description: 'Spec ID (e.g., \"SPEC-001\")',\n                },\n              },\n              required: [\"spec_id\"],\n            },\n          },\n          {\n            name: \"upsert_spec\",\n            description: \"Create a new spec (update not yet supported in CLI)\",\n            inputSchema: {\n              type: \"object\",\n              properties: {\n                spec_id: {\n                  type: \"string\",\n                  description:\n                    \"Spec ID (optional - if provided, updates the spec; if not, creates new)\",\n                },\n                title: {\n                  type: \"string\",\n                  description: \"Spec title (required for create)\",\n                },\n                priority: {\n                  type: \"number\",\n                  description: \"Priority (0-4, 0=highest) (optional)\",\n                },\n                description: {\n                  type: \"string\",\n                  description: \"Spec description (optional)\",\n                },\n                parent: {\n                  type: \"string\",\n                  description: \"Parent spec ID (optional)\",\n                },\n                tags: {\n                  type: \"array\",\n                  items: { type: \"string\" },\n                  description: \"Tags (optional)\",\n                },\n              },\n            },\n          },\n          {\n            name: \"link\",\n            description:\n              \"Create a relationship between two entities (specs or issues)\",\n            inputSchema: {\n              type: \"object\",\n              properties: {\n                from_id: {\n                  type: \"string\",\n                  description: \"Source entity ID\",\n                },\n                to_id: {\n                  type: \"string\",\n                  description: \"Target entity ID\",\n                },\n                type: {\n                  type: \"string\",\n                  enum: [\n                    \"blocks\",\n                    \"implements\",\n                    \"references\",\n                    \"depends-on\",\n                    \"discovered-from\",\n                    \"related\",\n                  ],\n                  description: \"Relationship type\",\n                },\n              },\n              required: [\"from_id\", \"to_id\"],\n            },\n          },\n          {\n            name: \"add_reference\",\n            description:\n              \"Add an inline cross-reference/mention to a spec or issue using Obsidian-style [[ID]] syntax. References are inserted at a specific location in the markdown content. Use this to add references to an issue or spec without having to modify the content directly.\",\n            inputSchema: {\n              type: \"object\",\n              properties: {\n                entity_id: {\n                  type: \"string\",\n                  description: \"Target entity ID (where to add the reference)\",\n                },\n                reference_id: {\n                  type: \"string\",\n                  description: \"ID to reference (e.g., ISSUE-001, SPEC-002)\",\n                },\n                display_text: {\n                  type: \"string\",\n                  description: \"Display text (optional)\",\n                },\n                relationship_type: {\n                  type: \"string\",\n                  enum: [\n                    \"blocks\",\n                    \"implements\",\n                    \"references\",\n                    \"depends-on\",\n                    \"discovered-from\",\n                    \"related\",\n                  ],\n                  description: \"Relationship type (optional)\",\n                },\n                line: {\n                  type: \"number\",\n                  description:\n                    \"Line number to insert reference (use line OR text, not both)\",\n                },\n                text: {\n                  type: \"string\",\n                  description:\n                    \"Text to search for insertion point (use line OR text, not both)\",\n                },\n                format: {\n                  type: \"string\",\n                  enum: [\"inline\", \"newline\"],\n                  description:\n                    \"Format: inline (same line) or newline (new line)\",\n                  default: \"inline\",\n                },\n                // TODO: Add position handling later if needed.\n              },\n              required: [\"entity_id\", \"reference_id\"],\n            },\n          },\n          {\n            name: \"add_feedback\",\n            description:\n              \"Provide anchored feedback to a spec. IMPORTANT: You MUST specify either 'line' OR 'text' to anchor the feedback to a specific location in the spec. \",\n            inputSchema: {\n              type: \"object\",\n              properties: {\n                issue_id: {\n                  type: \"string\",\n                  description:\n                    \"Issue ID providing feedback (required for create)\",\n                },\n                spec_id: {\n                  type: \"string\",\n                  description:\n                    \"Spec ID receiving feedback (required for create)\",\n                },\n                content: {\n                  type: \"string\",\n                  description: \"Feedback content (required for create)\",\n                },\n                type: {\n                  type: \"string\",\n                  enum: [\"comment\", \"suggestion\", \"request\"],\n                  description: \"Feedback type\",\n                },\n                line: {\n                  type: \"number\",\n                  description:\n                    \"Line number to anchor feedback (REQUIRED: must use either 'line' OR 'text', not both). Use this if you know the exact line number in the spec markdown file.\",\n                },\n                text: {\n                  type: \"string\",\n                  description:\n                    \"Text snippet to anchor feedback (REQUIRED: must use either 'line' OR 'text', not both). Must be an EXACT substring match from the spec content - case-sensitive and whitespace-sensitive. Use show_spec first to see the exact content and copy the text precisely.\",\n                },\n                // TODO: Re-enable when the agent data structure is more developed.\n                // agent: {\n                //   type: \"string\",\n                //   description: \"Agent providing feedback\",\n                // },\n              },\n            },\n          },\n        ],\n      };\n    });\n\n    // Handle tool calls\n    this.server.setRequestHandler(CallToolRequestSchema, async (request) => {\n      const { name, arguments: args } = request.params;\n\n      if (!this.isInitialized) {\n        const workingDir = this.client[\"workingDir\"] || process.cwd();\n        return {\n          content: [\n            {\n              type: \"text\",\n              text: `\u26A0\uFE0F  sudocode is not initialized in this directory.\\n\\nWorking directory: ${workingDir}\\n\\nPlease run 'sudocode init' in your project root first.`,\n            },\n          ],\n          isError: true,\n        };\n      }\n\n      try {\n        let result: any;\n\n        switch (name) {\n          case \"ready\":\n            result = await issueTools.ready(this.client, args as any);\n            break;\n\n          case \"list_issues\":\n            result = await issueTools.listIssues(this.client, args as any);\n            break;\n\n          case \"show_issue\":\n            result = await issueTools.showIssue(this.client, args as any);\n            break;\n\n          case \"upsert_issue\":\n            result = await issueTools.upsertIssue(this.client, args as any);\n            break;\n\n          case \"list_specs\":\n            result = await specTools.listSpecs(this.client, args as any);\n            break;\n\n          case \"show_spec\":\n            result = await specTools.showSpec(this.client, args as any);\n            break;\n\n          case \"upsert_spec\":\n            result = await specTools.upsertSpec(this.client, args as any);\n            break;\n\n          case \"link\":\n            result = await relationshipTools.link(this.client, args as any);\n            break;\n\n          case \"add_reference\":\n            result = await referenceTools.addReference(\n              this.client,\n              args as any\n            );\n            break;\n\n          case \"add_feedback\":\n            result = await feedbackTools.addFeedback(this.client, args as any);\n            break;\n\n          default:\n            throw new Error(`Unknown tool: ${name}`);\n        }\n\n        return {\n          content: [\n            {\n              type: \"text\",\n              text: JSON.stringify(result, null, 2),\n            },\n          ],\n        };\n      } catch (error) {\n        let errorText = `Error: ${\n          error instanceof Error ? error.message : String(error)\n        }`;\n\n        // Include stderr if this is a sudocode error\n        if (error instanceof Error && \"stderr\" in error && error.stderr) {\n          errorText += `\\n\\nStderr:\\n${error.stderr}`;\n        }\n\n        return {\n          content: [\n            {\n              type: \"text\",\n              text: errorText,\n            },\n          ],\n          isError: true,\n        };\n      }\n    });\n\n    // List available resources\n    this.server.setRequestHandler(ListResourcesRequestSchema, async () => {\n      return {\n        resources: [\n          {\n            uri: \"sudocode://quickstart\",\n            name: \"sudocode Quickstart Guide\",\n            description:\n              \"Introduction to sudocode workflow and best practices for agents\",\n            mimeType: \"text/markdown\",\n          },\n        ],\n      };\n    });\n\n    // Read resource content\n    this.server.setRequestHandler(\n      ReadResourceRequestSchema,\n      async (request) => {\n        const { uri } = request.params;\n\n        if (uri === \"sudocode://quickstart\") {\n          return {\n            contents: [\n              {\n                uri,\n                mimeType: \"text/markdown\",\n                text: `# sudocode Quickstart\n\nsudocode is a git-native spec and issue management system designed for AI-assisted development.\n\n## Core Concepts\n\n**Specs**: Technical specifications stored as markdown files\n- Types: architecture, api, database, feature, research\n- Status: draft \u2192 review \u2192 approved \u2192 deprecated\n- Each spec has a unique ID (e.g., SPEC-001) and file path\n\n**Issues**: Work items tracked in the database\n- Types: bug, feature, task, epic, chore\n- Status: open \u2192 in_progress \u2192 blocked \u2192 closed\n- Can reference and implement specs\n\n**Feedback**: Issues can provide anchored feedback on specs\n- Anchors track specific lines/sections in spec markdown\n- Auto-relocates when specs change (smart anchoring)\n- Types: comment, suggestion, request\n\n## Typical Workflow\n\n1. **Check ready work**: \\`ready\\` tool to find tasks with no blockers\n2. **Claim work**: \\`update_issue\\` with status=in_progress\n3. **Review specs**: \\`show_spec\\` to understand requirements\n4. **Provide feedback**: \\`add_feedback\\` when specs are unclear\n5. **Complete work**: \\`close_issue\\` when done\n6. **Link entities**: Use \\`link\\` to create relationships\n\n## Relationship Types\n- \\`blocks\\`: Hard blocker (to_id must complete before from_id)\n- \\`implements\\`: Issue implements a spec\n- \\`references\\`: Soft reference\n- \\`depends-on\\`: General dependency\n- \\`discovered-from\\`: New work found during implementation\n- \\`related\\`: General relationship\n`,\n              },\n            ],\n          };\n        }\n\n        throw new Error(`Unknown resource: ${uri}`);\n      }\n    );\n  }\n\n  /**\n   * Check for .sudocode directory and required files\n   * Returns initialization status and handles auto-import if needed\n   */\n  private async checkForInit(): Promise<{\n    initialized: boolean;\n    sudocodeExists: boolean;\n    message?: string;\n  }> {\n    const workingDir = this.client[\"workingDir\"] || process.cwd();\n    const sudocodeDir = join(workingDir, \".sudocode\");\n    const cacheDbPath = join(sudocodeDir, \"cache.db\");\n    const issuesPath = join(sudocodeDir, \"issues.jsonl\");\n    const specsPath = join(sudocodeDir, \"specs.jsonl\");\n\n    // Check if .sudocode directory exists\n    if (!existsSync(sudocodeDir)) {\n      return {\n        initialized: false,\n        sudocodeExists: false,\n        message: \"No .sudocode directory found\",\n      };\n    }\n\n    // .sudocode exists, check for cache.db\n    if (!existsSync(cacheDbPath)) {\n      // Try to auto-import from JSONL files if they exist\n      if (existsSync(issuesPath) || existsSync(specsPath)) {\n        try {\n          console.error(\n            \"Found .sudocode directory but no cache.db, running import...\"\n          );\n          await this.client.exec([\"import\"]);\n          console.error(\"\u2713 Successfully imported data to cache.db\");\n          return {\n            initialized: true,\n            sudocodeExists: true,\n            message: \"Auto-imported from JSONL files\",\n          };\n        } catch (error) {\n          return {\n            initialized: false,\n            sudocodeExists: true,\n            message: `Failed to import: ${\n              error instanceof Error ? error.message : String(error)\n            }`,\n          };\n        }\n      } else {\n        try {\n          console.error(\n            \"Found .sudocode directory but no issues.jsonl or specs.jsonl, running init...\"\n          );\n          await this.client.exec([\"init\"]);\n          console.error(\"\u2713 Successfully initialized sudocode\");\n          await this.client.exec([\"import\"]);\n          return {\n            initialized: true,\n            sudocodeExists: true,\n            message: \"Initialized sudocode\",\n          };\n        } catch (error) {\n          return {\n            initialized: false,\n            sudocodeExists: true,\n            message: `Failed to initialize: ${\n              error instanceof Error ? error.message : String(error)\n            }`,\n          };\n        }\n      }\n    }\n\n    return {\n      initialized: true,\n      sudocodeExists: true,\n    };\n  }\n\n  /**\n   * Check if sudocode is initialized in the working directory\n   * This provides early warning to users without blocking server startup\n   */\n  private async checkInitialization() {\n    const initStatus = await this.checkForInit();\n    const workingDir = this.client[\"workingDir\"] || process.cwd();\n\n    if (initStatus.initialized) {\n      this.isInitialized = true;\n      console.error(\"\u2713 sudocode initialized successfully\");\n      if (initStatus.message) {\n        console.error(`  ${initStatus.message}`);\n      }\n    } else {\n      this.isInitialized = false;\n      console.error(\"\");\n      console.error(\"\u26A0\uFE0F  WARNING: sudocode is not initialized\");\n      console.error(`   Working directory: ${workingDir}`);\n      console.error(\"\");\n\n      if (!initStatus.sudocodeExists) {\n        console.error(\"   No .sudocode directory found.\");\n        console.error(\"   To initialize, run:\");\n        console.error(\"   $ sudocode init\");\n      } else {\n        console.error(`   Issue: ${initStatus.message}`);\n        console.error(\"   The .sudocode directory exists but is incomplete.\");\n        console.error(\"   Try running:\");\n        console.error(\"   $ sudocode import\");\n      }\n    }\n  }\n\n  async run() {\n    // Check if sudocode is initialized (non-blocking warning)\n    await this.checkInitialization();\n\n    const transport = new StdioServerTransport();\n    await this.server.connect(transport);\n    console.error(\"sudocode MCP server running on stdio\");\n  }\n}\n", "/**\n * sudocode CLI client wrapper\n *\n * This module provides a client class that spawns `sudocode` CLI commands\n * and parses their JSON output for use in MCP tools.\n */\n\nimport { spawn } from \"child_process\";\nimport { fileURLToPath } from \"url\";\nimport { dirname, join } from \"path\";\nimport { existsSync, writeFileSync, chmodSync } from \"fs\";\nimport { SudocodeClientConfig, SudocodeError } from \"./types.js\";\n\nexport class SudocodeClient {\n  private workingDir: string;\n  private cliPath: string;\n  private cliArgs: string[];\n  private dbPath?: string;\n  private versionChecked = false;\n\n  constructor(config?: SudocodeClientConfig) {\n    // Get working directory and expand variables if needed\n    let workingDir =\n      config?.workingDir || process.env.SUDOCODE_WORKING_DIR || process.cwd();\n\n    // Fix unexpanded ${workspaceFolder} variable - use PWD or cwd() instead\n    if (workingDir === \"${workspaceFolder}\" || workingDir.includes(\"${\")) {\n      workingDir = process.env.PWD || process.cwd();\n    }\n\n    this.workingDir = workingDir;\n    this.dbPath = config?.dbPath || process.env.SUDOCODE_DB;\n\n    // Auto-discover CLI path from node_modules or use configured/env path\n    const cliInfo = this.findCliPath();\n    this.cliPath = cliInfo.path;\n    this.cliArgs = cliInfo.args;\n  }\n\n  /**\n   * Find the CLI by looking in node_modules/@sudocode-ai/cli\n   * Since we added @sudocode-ai/cli as a dependency, it should be there\n   */\n  private findCliPath(): { path: string; args: string[] } {\n    try {\n      const currentFile = fileURLToPath(import.meta.url);\n      const currentDir = dirname(currentFile);\n\n      // Look for @sudocode-ai/cli in various possible locations\n      const possiblePaths = [\n        // Workspace root node_modules (development)\n        join(\n          currentDir,\n          \"..\",\n          \"..\",\n          \"node_modules\",\n          \"@sudocode-ai\",\n          \"cli\",\n          \"dist\",\n          \"cli.js\"\n        ),\n        // Local package node_modules (when installed from npm)\n        join(\n          currentDir,\n          \"..\",\n          \"node_modules\",\n          \"@sudocode-ai\",\n          \"cli\",\n          \"dist\",\n          \"cli.js\"\n        ),\n      ];\n\n      for (const cliJsPath of possiblePaths) {\n        if (existsSync(cliJsPath)) {\n          // Return node + cli.js path instead of creating a wrapper\n          return {\n            path: process.execPath, // Use current node binary\n            args: [cliJsPath], // Pass cli.js as first argument\n          };\n        }\n      }\n    } catch (error) {\n      // Ignore errors and fall back to 'sudocode' command\n    }\n\n    // Fall back to 'sudocode' command in PATH\n    return { path: \"sudocode\", args: [] };\n  }\n\n  /**\n   * Execute a CLI command and return parsed JSON output\n   */\n  async exec(args: string[], options?: { timeout?: number }): Promise<any> {\n    // Check CLI version on first call\n    if (!this.versionChecked) {\n      await this.checkVersion();\n      this.versionChecked = true;\n    }\n\n    // Build command arguments - prepend cliArgs (e.g., cli.js path)\n    const cmdArgs = [...this.cliArgs, ...args];\n\n    // Add --json flag if not already present\n    if (!cmdArgs.includes(\"--json\")) {\n      cmdArgs.push(\"--json\");\n    }\n\n    // Add --db flag if dbPath is configured\n    if (this.dbPath && !cmdArgs.includes(\"--db\")) {\n      cmdArgs.push(\"--db\", this.dbPath);\n    }\n\n    return new Promise((resolve, reject) => {\n      const proc = spawn(this.cliPath, cmdArgs, {\n        cwd: this.workingDir,\n        env: process.env,\n      });\n\n      let stdout = \"\";\n      let stderr = \"\";\n\n      proc.stdout.on(\"data\", (data) => {\n        stdout += data.toString();\n      });\n\n      proc.stderr.on(\"data\", (data) => {\n        stderr += data.toString();\n      });\n\n      // Set timeout if specified\n      const timeout = options?.timeout || 30000; // Default 30s\n      const timer = setTimeout(() => {\n        proc.kill();\n        reject(\n          new SudocodeError(\n            `Command timed out after ${timeout}ms`,\n            -1,\n            \"Timeout\"\n          )\n        );\n      }, timeout);\n\n      proc.on(\"close\", (code) => {\n        clearTimeout(timer);\n\n        if (code !== 0) {\n          reject(\n            new SudocodeError(\n              `CLI command failed with exit code ${code}`,\n              code || -1,\n              stderr\n            )\n          );\n          return;\n        }\n\n        // Parse JSON output\n        try {\n          const result = JSON.parse(stdout);\n          resolve(result);\n        } catch (error) {\n          reject(\n            new SudocodeError(\n              `Failed to parse JSON output: ${\n                error instanceof Error ? error.message : String(error)\n              }`,\n              -1,\n              stdout\n            )\n          );\n        }\n      });\n\n      proc.on(\"error\", (error) => {\n        clearTimeout(timer);\n        reject(\n          new SudocodeError(\n            `Failed to spawn CLI: ${error.message}`,\n            -1,\n            error.message\n          )\n        );\n      });\n    });\n  }\n\n  /**\n   * Check that the CLI is installed and get its version\n   */\n  async checkVersion(): Promise<{ version: string }> {\n    try {\n      const proc = spawn(this.cliPath, [...this.cliArgs, \"--version\"], {\n        cwd: this.workingDir,\n      });\n\n      let stdout = \"\";\n      let stderr = \"\";\n\n      proc.stdout.on(\"data\", (data) => {\n        stdout += data.toString();\n      });\n\n      proc.stderr.on(\"data\", (data) => {\n        stderr += data.toString();\n      });\n\n      return new Promise((resolve, reject) => {\n        proc.on(\"close\", (code) => {\n          if (code !== 0) {\n            reject(\n              new SudocodeError(\n                `CLI not found or failed to execute. Make sure 'sudocode' is installed and in your PATH.`,\n                code || -1,\n                stderr\n              )\n            );\n            return;\n          }\n\n          // Version output format: \"sudocode version X.Y.Z\" or just \"X.Y.Z\"\n          const versionMatch = stdout.match(/(\\d+\\.\\d+\\.\\d+)/);\n          const version = versionMatch ? versionMatch[1] : stdout.trim();\n\n          resolve({ version });\n        });\n\n        proc.on(\"error\", () => {\n          reject(\n            new SudocodeError(\n              `CLI not found at path: ${this.cliPath}. Make sure 'sudocode' is installed.`,\n              -1,\n              \"CLI not found\"\n            )\n          );\n        });\n      });\n    } catch (error) {\n      throw new SudocodeError(\n        `Failed to check CLI version: ${\n          error instanceof Error ? error.message : String(error)\n        }`,\n        -1,\n        \"\"\n      );\n    }\n  }\n}\n", "/**\n * Type definitions for sudocode MCP server\n *\n * Core entity types are imported from the main sudocode package.\n * This file contains MCP-specific types and some forward-compatible types\n * for fields that may be added to the core package in the future.\n */\n\n// Re-export core types from the main package\nexport type {\n  Spec,\n  Issue,\n  Relationship,\n  EntityType,\n  RelationshipType,\n  IssueStatus,\n  FeedbackAnchor,\n  FeedbackType,\n  IssueFeedback as Feedback,\n} from \"@sudocode-ai/types\";\n\n// ============================================================================\n// MCP-SPECIFIC TYPES\n// These types are used by the MCP interface but may not be fully supported\n// by the current CLI implementation. They represent forward-compatible\n// features that may be added in the future.\n// ============================================================================\n\n/**\n * Issue type classification\n * NOTE: Not yet stored in database or supported by CLI filtering\n */\nexport type IssueType = \"bug\" | \"feature\" | \"task\" | \"epic\" | \"chore\";\n\n/**\n * Spec status lifecycle\n * NOTE: Not yet stored in database or supported by CLI filtering\n */\nexport type SpecStatus = \"draft\" | \"review\" | \"approved\" | \"deprecated\";\n\n/**\n * Spec type classification\n * NOTE: Not yet stored in database or supported by CLI filtering\n */\nexport type SpecType =\n  | \"architecture\"\n  | \"api\"\n  | \"database\"\n  | \"feature\"\n  | \"research\";\n\n// ============================================================================\n// CLIENT CONFIGURATION\n// ============================================================================\n\nexport interface SudocodeClientConfig {\n  workingDir?: string;\n  cliPath?: string;\n  dbPath?: string;\n  syncOnStartup?: boolean;\n}\n\n// ============================================================================\n// ERROR TYPES\n// ============================================================================\n\nexport class SudocodeError extends Error {\n  constructor(\n    message: string,\n    public exitCode: number,\n    public stderr: string\n  ) {\n    super(message);\n    this.name = \"SudocodeError\";\n  }\n}\n", "/**\n * MCP tools for issue management\n */\n\nimport { SudocodeClient } from \"../client.js\";\nimport { Issue, IssueStatus } from \"../types.js\";\n\n// Tool parameter types\nexport interface ReadyParams {}\n\nexport interface ListIssuesParams {\n  status?: IssueStatus;\n  priority?: number;\n  limit?: number;\n  search?: string;\n  archived?: boolean;\n}\n\nexport interface ShowIssueParams {\n  issue_id: string;\n}\n\nexport interface UpsertIssueParams {\n  issue_id?: string; // If provided, update; otherwise create\n  title?: string; // Required for create, optional for update\n  description?: string;\n  priority?: number;\n  parent?: string;\n  tags?: string[];\n  status?: IssueStatus;\n  archived?: boolean;\n  // TODO: Reintroduce assignee later on when first-class agents are supported.\n}\n\n// Tool implementations\n\n/**\n * Find issues ready to work on (no blockers) and get project status\n */\nexport async function ready(\n  client: SudocodeClient,\n  params: ReadyParams = {}\n): Promise<any> {\n  const readyResult = await client.exec([\"ready\"]);\n  const statusResult = await client.exec([\"status\"]);\n\n  // Redact content field from issues to keep response shorter\n  if (readyResult.issues && Array.isArray(readyResult.issues)) {\n    readyResult.issues = readyResult.issues.map((issue: any) => {\n      const { content, ...rest } = issue;\n      return rest;\n    });\n  }\n\n  return {\n    ready: readyResult,\n    status: statusResult,\n  };\n}\n\n/**\n * List all issues with optional filters\n */\nexport async function listIssues(\n  client: SudocodeClient,\n  params: ListIssuesParams = {}\n): Promise<Issue[]> {\n  const args = [\"issue\", \"list\"];\n\n  if (params.status) {\n    args.push(\"--status\", params.status);\n  }\n  if (params.priority !== undefined) {\n    args.push(\"--priority\", params.priority.toString());\n  }\n  if (params.limit !== undefined) {\n    args.push(\"--limit\", params.limit.toString());\n  }\n  if (params.search) {\n    args.push(\"--grep\", params.search);\n  }\n  // Default to excluding archived unless explicitly specified\n  const archived = params.archived !== undefined ? params.archived : false;\n  args.push(\"--archived\", archived.toString());\n\n  const issues = await client.exec(args);\n\n  // Redact content field from issues to keep response shorter\n  if (Array.isArray(issues)) {\n    return issues.map((issue: any) => {\n      const { content, ...rest } = issue;\n      return rest;\n    });\n  }\n\n  return issues;\n}\n\n/**\n * Show detailed issue information including relationships and feedback\n */\nexport async function showIssue(\n  client: SudocodeClient,\n  params: ShowIssueParams\n): Promise<any> {\n  const args = [\"issue\", \"show\", params.issue_id];\n  return client.exec(args);\n}\n\n/**\n * Upsert an issue (create if no issue_id, update if issue_id provided)\n */\nexport async function upsertIssue(\n  client: SudocodeClient,\n  params: UpsertIssueParams\n): Promise<Issue> {\n  const isUpdate = !!params.issue_id;\n\n  if (isUpdate) {\n    // Update mode\n    const args = [\"issue\", \"update\", params.issue_id!];\n\n    if (params.status) {\n      args.push(\"--status\", params.status);\n    }\n    if (params.priority !== undefined) {\n      args.push(\"--priority\", params.priority.toString());\n    }\n    if (params.title) {\n      args.push(\"--title\", params.title);\n    }\n    if (params.description) {\n      args.push(\"--description\", params.description);\n    }\n    if (params.archived !== undefined) {\n      args.push(\"--archived\", params.archived.toString());\n    }\n\n    return client.exec(args);\n  } else {\n    // Create mode\n    if (!params.title) {\n      throw new Error(\"title is required when creating a new issue\");\n    }\n\n    const args = [\"issue\", \"create\", params.title];\n\n    if (params.description) {\n      args.push(\"--description\", params.description);\n    }\n    if (params.priority !== undefined) {\n      args.push(\"--priority\", params.priority.toString());\n    }\n    if (params.parent) {\n      args.push(\"--parent\", params.parent);\n    }\n    if (params.tags && params.tags.length > 0) {\n      args.push(\"--tags\", params.tags.join(\",\"));\n    }\n\n    return client.exec(args);\n  }\n}\n", "/**\n * MCP tools for spec management\n */\n\nimport { SudocodeClient } from \"../client.js\";\nimport { Spec } from \"../types.js\";\n\n// Tool parameter types\nexport interface ListSpecsParams {\n  limit?: number;\n  search?: string;\n  archived?: boolean;\n}\n\nexport interface ShowSpecParams {\n  spec_id: string;\n}\n\nexport interface UpsertSpecParams {\n  spec_id?: string; // If provided, update; otherwise create\n  title?: string; // Required for create, optional for update\n  priority?: number;\n  description?: string;\n  parent?: string;\n  tags?: string[];\n  archived?: boolean;\n}\n\n// Tool implementations\n\n/**\n * List all specs with optional filters\n */\nexport async function listSpecs(\n  client: SudocodeClient,\n  params: ListSpecsParams = {}\n): Promise<Spec[]> {\n  const args = [\"spec\", \"list\"];\n\n  if (params.limit !== undefined) {\n    args.push(\"--limit\", params.limit.toString());\n  }\n  if (params.search) {\n    args.push(\"--grep\", params.search);\n  }\n  // Default to excluding archived unless explicitly specified\n  const archived = params.archived !== undefined ? params.archived : false;\n  args.push(\"--archived\", archived.toString());\n\n  const specs = await client.exec(args);\n\n  // Redact content field from specs to keep response shorter\n  if (Array.isArray(specs)) {\n    return specs.map((spec: any) => {\n      const { content, ...rest } = spec;\n      return rest;\n    });\n  }\n\n  return specs;\n}\n\n/**\n * Show detailed spec information including feedback\n */\nexport async function showSpec(\n  client: SudocodeClient,\n  params: ShowSpecParams\n): Promise<any> {\n  const args = [\"spec\", \"show\", params.spec_id];\n  return client.exec(args);\n}\n\n/**\n * Upsert a spec (create if no spec_id, update if spec_id provided)\n */\nexport async function upsertSpec(\n  client: SudocodeClient,\n  params: UpsertSpecParams\n): Promise<Spec> {\n  const isUpdate = !!params.spec_id;\n\n  if (isUpdate) {\n    // Update mode\n    const args = [\"spec\", \"update\", params.spec_id!];\n\n    if (params.title) {\n      args.push(\"--title\", params.title);\n    }\n    if (params.priority !== undefined) {\n      args.push(\"--priority\", params.priority.toString());\n    }\n    if (params.description) {\n      args.push(\"--description\", params.description);\n    }\n    if (params.parent !== undefined) {\n      args.push(\"--parent\", params.parent || \"\");\n    }\n    if (params.tags !== undefined) {\n      args.push(\"--tags\", params.tags.join(\",\"));\n    }\n    if (params.archived !== undefined) {\n      args.push(\"--archived\", params.archived.toString());\n    }\n\n    return client.exec(args);\n  } else {\n    // Create mode\n    if (!params.title) {\n      throw new Error(\"title is required when creating a new spec\");\n    }\n\n    const args = [\"spec\", \"create\", params.title];\n\n    if (params.priority !== undefined) {\n      args.push(\"--priority\", params.priority.toString());\n    }\n    if (params.description) {\n      args.push(\"--description\", params.description);\n    }\n    if (params.parent) {\n      args.push(\"--parent\", params.parent);\n    }\n    if (params.tags && params.tags.length > 0) {\n      args.push(\"--tags\", params.tags.join(\",\"));\n    }\n\n    return client.exec(args);\n  }\n}\n", "/**\n * MCP tools for relationship management\n */\n\nimport { SudocodeClient } from \"../client.js\";\n\n// Tool parameter types\nexport type RelationshipType =\n  | \"blocks\"\n  | \"implements\"\n  | \"references\"\n  | \"depends-on\"\n  | \"discovered-from\"\n  | \"related\";\n\nexport interface LinkParams {\n  from_id: string;\n  to_id: string;\n  type?: RelationshipType;\n}\n\n// Tool implementation\n\n/**\n * Create a relationship between two entities (specs or issues)\n */\nexport async function link(\n  client: SudocodeClient,\n  params: LinkParams\n): Promise<any> {\n  const args = [\"link\", params.from_id, params.to_id];\n\n  if (params.from_id === params.to_id) {\n    throw new Error(\"from_id and to_id cannot be the same\");\n  }\n  if (params.type) {\n    args.push(\"--type\", params.type);\n  }\n\n  return client.exec(args);\n}\n", "/**\n * MCP tools for feedback management\n */\n\nimport { SudocodeClient } from \"../client.js\";\nimport { Feedback, FeedbackType } from \"../types.js\";\n\n// Tool parameter types\nexport interface AddFeedbackParams {\n  issue_id: string;\n  spec_id: string;\n  content: string;\n  type?: FeedbackType;\n  line?: number;\n  text?: string;\n  agent?: string;\n}\n\n/**\n * Add anchored feedback to a spec\n */\nexport async function addFeedback(\n  client: SudocodeClient,\n  params: AddFeedbackParams\n): Promise<Feedback> {\n  const args = [\"feedback\", \"add\", params.issue_id, params.spec_id];\n\n  args.push(\"--content\", params.content);\n\n  if (params.type) {\n    args.push(\"--type\", params.type);\n  }\n  if (params.line !== undefined) {\n    args.push(\"--line\", params.line.toString());\n  }\n  if (params.text) {\n    args.push(\"--text\", params.text);\n  }\n  // if (params.agent) {\n  //   args.push(\"--agent\", params.agent);\n  // }\n\n  return client.exec(args);\n}\n", "/**\n * MCP tools for reference management\n */\n\nimport { SudocodeClient } from \"../client.js\";\n\n// Tool parameter types\nexport interface AddReferenceParams {\n  entity_id: string;\n  reference_id: string;\n  display_text?: string;\n  relationship_type?: string;\n  line?: number;\n  text?: string;\n  format?: \"inline\" | \"newline\";\n  position?: \"before\" | \"after\";\n}\n\n/**\n * Add a cross-reference to a spec or issue\n *\n * Tries spec first, then issue. The CLI command handles entity validation.\n */\nexport async function addReference(\n  client: SudocodeClient,\n  params: AddReferenceParams\n): Promise<any> {\n  // Build command args\n  const buildArgs = (command: \"spec\" | \"issue\") => {\n    const args = [command, \"add-ref\", params.entity_id, params.reference_id];\n\n    if (params.line !== undefined) {\n      args.push(\"--line\", params.line.toString());\n    }\n    if (params.text) {\n      args.push(\"--text\", params.text);\n    }\n    if (params.display_text) {\n      args.push(\"--display\", params.display_text);\n    }\n    if (params.relationship_type) {\n      args.push(\"--type\", params.relationship_type);\n    }\n    if (params.format) {\n      args.push(\"--format\", params.format);\n    }\n    if (params.position) {\n      args.push(\"--position\", params.position);\n    }\n\n    return args;\n  };\n\n  // TODO: Infer entity type from ID pattern if possible.\n  // Try spec first\n  try {\n    return await client.exec(buildArgs(\"spec\"));\n  } catch (specError) {\n    // If spec command fails, try issue\n    try {\n      return await client.exec(buildArgs(\"issue\"));\n    } catch (issueError) {\n      // If both fail, throw the issue error (it will have the proper error message)\n      throw issueError;\n    }\n  }\n}\n", "#!/usr/bin/env node\n\n/**\n * sudocode MCP Server entry point\n */\n\nimport { SudocodeMCPServer } from \"./server.js\";\nimport { SudocodeClientConfig } from \"./types.js\";\n\nfunction parseArgs(): SudocodeClientConfig {\n  const config: SudocodeClientConfig = {};\n  const args = process.argv.slice(2);\n\n  for (let i = 0; i < args.length; i++) {\n    const arg = args[i];\n\n    switch (arg) {\n      case \"--working-dir\":\n      case \"-w\":\n        config.workingDir = args[++i];\n        break;\n      case \"--cli-path\":\n        config.cliPath = args[++i];\n        break;\n      case \"--db-path\":\n      case \"--db\":\n        config.dbPath = args[++i];\n        break;\n      case \"--no-sync\":\n        config.syncOnStartup = false;\n        break;\n      case \"--help\":\n      case \"-h\":\n        console.log(`\nsudocode MCP Server\n\nUsage: sudocode-mcp [options]\n\nOptions:\n  -w, --working-dir <path>  Working directory (default: cwd or SUDOCODE_WORKING_DIR)\n  --cli-path <path>         Path to sudocode CLI (default: 'sudocode' or SUDOCODE_PATH)\n  --db-path <path>          Database path (default: auto-discover or SUDOCODE_DB)\n  --no-sync                 Skip initial sync on startup (default: sync enabled)\n  -h, --help                Show this help message\n\nEnvironment Variables:\n  SUDOCODE_WORKING_DIR      Default working directory\n  SUDOCODE_PATH             Default CLI path\n  SUDOCODE_DB               Default database path\n        `);\n        process.exit(0);\n        break;\n      default:\n        console.error(`Unknown option: ${arg}`);\n        console.error(\"Use --help for usage information\");\n        process.exit(1);\n    }\n  }\n\n  return config;\n}\n\nasync function main() {\n  const config = parseArgs();\n  const server = new SudocodeMCPServer(config);\n  await server.run();\n}\n\nmain().catch((error) => {\n  console.error(\"Fatal error:\", error);\n  process.exit(1);\n});\n"],
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