@stupidloud/codegraph 0.8.1 → 0.9.9

package/dist/mcp/server-instructions.js

@@ -28,45 +28,45 @@ editing code, not during.
 ## Answer directly — don't delegate exploration
 
 For "how does X work", architecture, trace, or where-is-X questions,
-answer DIRECTLY using 2-3 codegraph calls: \`codegraph_context\` first,
-then ONE \`codegraph_explore\` for the source of the symbols it surfaces.
-Codegraph IS the pre-built search index — so delegating the lookup to a
-separate file-reading sub-task/agent, or running your own grep + read
-loop, repeats work codegraph already did and costs more for the same
-answer. Reach for raw Read/Grep only to confirm a specific detail
-codegraph didn't cover. A direct codegraph answer is typically a handful
-of calls; a grep/read exploration is dozens.
+answer DIRECTLY — usually with ONE \`codegraph_explore\` call.
+\`codegraph_explore\` takes either a natural-language question or a bag of
+symbol/file names and returns the verbatim source of the relevant symbols
+grouped by file, so it is Read-equivalent and most often the ONLY
+codegraph call you need. Codegraph IS the pre-built search index — so
+delegating the lookup to a separate file-reading sub-task/agent, or
+running your own grep + read loop, repeats work codegraph already did and
+costs more for the same answer. Reach for raw Read/Grep only to confirm a
+specific detail codegraph didn't cover. A direct codegraph answer is
+typically one to a few calls; a grep/read exploration is dozens.
 
 ## Tool selection by intent
 
-- **"How does X work? / trace X end to end / explain the Y system / architecture?"** → \`codegraph_explore\` (PRIMARY for understanding — seed it with the key symbol names, read its output, don't grep+Read your way there)
-- **"What is the symbol named X? / where is X defined?"** → \`codegraph_search\` (pinpoint lookups)
-- **"What's the deal with this task / feature / area?"** → \`codegraph_context\` (lighter composed view of search + node + callers + callees)
-- **"What calls this?"** → \`codegraph_callers\`
-- **"What does this call?"** → \`codegraph_callees\`
-- **"What would changing this break?"** → \`codegraph_impact\`
-- **"Show me this symbol's source / signature / docstring."** → \`codegraph_node\`
-- **"Show me several related symbols' source / survey an area."** → \`codegraph_explore\` (ONE capped call; prefer over many codegraph_node/Read)
+- **Almost any question — "how does X work", architecture, a bug, "what/where is X", or surveying an area** → \`codegraph_explore\` (PRIMARY — call FIRST; ONE capped call returns the verbatim source of the relevant symbols grouped by file; most often the ONLY call you need)
+- **"How does X reach/become Y? / the flow / the path from X to Y"** → \`codegraph_explore\`, naming the symbols that span the flow (e.g. \`mutateElement renderScene\`) — it surfaces the call path among them, including dynamic-dispatch hops (callbacks, React re-render, JSX children) grep can't follow
+- **"What is the symbol named X?" (just its location)** → \`codegraph_search\`
+- **"What calls this?" / "What does this call?" / "What would changing this break?"** → \`codegraph_callers\` / \`codegraph_callees\` / \`codegraph_impact\`
+- **One specific symbol's full source (esp. a body \`codegraph_explore\` trimmed), or an OVERLOADED name** → \`codegraph_node\` (with \`includeCode\`): for an ambiguous name it returns EVERY matching definition's body in one call, so you never Read a file to find the right overload
 - **"What's in directory X?"** → \`codegraph_files\`
 - **"Is the index ready / what's its size?"** → \`codegraph_status\`
 
 ## Common chains
 
-- **Understanding / onboarding**: feed \`codegraph_explore\` the key symbol/file names and read its output (line-numbered source from many files in one call). If the question names nothing concrete, do ONE quick \`codegraph_search\` / \`codegraph_context\` to surface the names, then explore with them. Fill remaining gaps with \`codegraph_node\` / Read — don't drop back to grep+Read for the whole topic.
+- **Flow / "how does X reach Y"**: ONE \`codegraph_explore\` with the symbol names spanning the flow — it surfaces the call path among them (riding dynamic-dispatch hops) AND returns their source. No need to reconstruct the path with \`codegraph_search\` + \`codegraph_callers\`.
+- **Onboarding / understanding any area**: ONE \`codegraph_explore\` is usually the whole answer. Only follow up — \`codegraph_node\` for a specific symbol — if something is still unclear.
 - **Refactor planning**: \`codegraph_search\` → \`codegraph_callers\` → \`codegraph_impact\`. The blast-radius answer comes from impact, not from walking callers manually.
 - **Debugging a regression**: \`codegraph_callers\` of the suspected symbol; widen with \`codegraph_impact\` if an unexpected call appears.
 
 ## Anti-patterns
 
-- **Don't search-then-Read your way through an understanding question** — feed the names you find into \`codegraph_explore\` instead of Reading the files one by one; it does that whole loop in one call and returns line numbers you can cite directly.
+- **Trust codegraph's results — don't re-verify them with grep.** They come from a full AST parse; re-checking with grep is slower, less accurate, and wastes context.
 - **Don't grep first** when looking up a symbol by name — \`codegraph_search\` is faster and returns kind + location + signature.
-- **Don't reach for \`codegraph_explore\` on a pinpoint "where is X defined" lookup** — \`codegraph_search\` is one cheap call.
-- **Don't chain \`codegraph_search\` + \`codegraph_node\`** when you just want context — \`codegraph_context\` is one round-trip.
+- **Don't chain \`codegraph_search\` + \`codegraph_node\`** to understand an area — ONE \`codegraph_explore\` returns the relevant symbols' source together in a single round-trip.
 - **Don't loop \`codegraph_node\` over many symbols** — one \`codegraph_explore\` call returns them all grouped by file, while each separate call re-reads the whole context and costs far more. Use \`codegraph_node\` for a single symbol.
-- **Don't query the index immediately after editing a file** — the watcher needs ~500ms to debounce + sync. Wait for the next turn.
+- **After editing, check the staleness banner.** When a tool response starts with "⚠️ Some files referenced below were edited since the last index sync…", the listed files are pending re-index — Read those specific files for accurate content. Every file NOT in that banner is fresh, so still trust codegraph. \`codegraph_status\` also lists pending files under "Pending sync".
 
 ## Limitations
 
+- If a tool reports the project isn't initialized, \`.codegraph/\` doesn't exist yet — offer to run \`codegraph init -i\` to build the index.
 - Index lags file writes by ~1 second.
 - Cross-file resolution is best-effort name matching; ambiguous calls may return multiple candidates.
 - No live correctness validation — that's still the TypeScript compiler / test suite / linter's job. Codegraph supplements those with structural context they don't have.

package/dist/mcp/session.d.ts

@@ -0,0 +1,77 @@
+/**
+ * MCP per-connection session — speaks the JSON-RPC protocol (initialize,
+ * tools/list, tools/call) over a single {@link JsonRpcTransport}. It owns
+ * per-client state only (which protocol version the client asked for, whether
+ * it advertised `roots`, the one-shot roots/list latch); the heavyweight
+ * resources (CodeGraph, watcher, ToolHandler) live in the shared
+ * {@link MCPEngine} so daemon mode can collapse N inotify sets / DB handles
+ * to one.
+ *
+ * The state-machine itself mirrors what `MCPServer` used to do inline before
+ * issue #411 split it out — the same regression tests in
+ * `__tests__/mcp-initialize.test.ts` still drive this code path.
+ */
+import { JsonRpcTransport } from './transport';
+import { MCPEngine } from './engine';
+/**
+ * MCP Server Info — kept on the session because some clients log it. The
+ * version tracks the real package version (was a hard-coded '0.1.0').
+ */
+export declare const SERVER_INFO: {
+    name: string;
+    version: string;
+};
+/** MCP Protocol Version (latest the server claims). */
+export declare const PROTOCOL_VERSION = "2024-11-05";
+export interface MCPSessionOptions {
+    /**
+     * Explicit project path from the `--path` CLI flag. When set, the session
+     * will not bother asking the client for `roots/list` — we already know
+     * where the project lives.
+     */
+    explicitProjectPath?: string | null;
+}
+/**
+ * One MCP client's view of the server. Created fresh per stdio launch
+ * (direct mode) or per socket connection (daemon mode).
+ */
+export declare class MCPSession {
+    private transport;
+    private engine;
+    private clientSupportsRoots;
+    private rootsAttempted;
+    private resolvePromise;
+    private explicitProjectPath;
+    constructor(transport: JsonRpcTransport, engine: MCPEngine, opts?: MCPSessionOptions);
+    /**
+     * Start handling messages from the transport. Returns immediately — the
+     * session lives for as long as the transport is open.
+     */
+    start(): void;
+    /**
+     * Tear down the session. Does NOT touch the engine (the engine may serve
+     * other sessions) or call `process.exit` (the daemon decides when to exit).
+     */
+    stop(): void;
+    /** Underlying transport — exposed for daemon-side close hooks. */
+    getTransport(): JsonRpcTransport;
+    private handleMessage;
+    private handleInitialize;
+    private handleToolsList;
+    private handleToolsCall;
+    /**
+     * Lazy default-project resolution. Three layers:
+     *   1. await the in-flight init kicked off from `handleInitialize` (if any);
+     *   2. if still uninitialized and we never asked the client for its roots,
+     *      do so now (one-shot); fall back to cwd if the client lacks roots;
+     *   3. last-resort: re-walk from the best candidate — picks up projects
+     *      that were `codegraph init`'d *after* the server started.
+     */
+    private retryInitIfNeeded;
+    /**
+     * Ask the client for its workspace root via `roots/list` and open the
+     * first one. Falls back to `process.cwd()` on timeout or empty answer.
+     */
+    private initFromRoots;
+}
+//# sourceMappingURL=session.d.ts.map

package/dist/mcp/session.d.ts.map

@@ -0,0 +1 @@
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package/dist/mcp/session.js

@@ -0,0 +1,294 @@
+"use strict";
+/**
+ * MCP per-connection session — speaks the JSON-RPC protocol (initialize,
+ * tools/list, tools/call) over a single {@link JsonRpcTransport}. It owns
+ * per-client state only (which protocol version the client asked for, whether
+ * it advertised `roots`, the one-shot roots/list latch); the heavyweight
+ * resources (CodeGraph, watcher, ToolHandler) live in the shared
+ * {@link MCPEngine} so daemon mode can collapse N inotify sets / DB handles
+ * to one.
+ *
+ * The state-machine itself mirrors what `MCPServer` used to do inline before
+ * issue #411 split it out — the same regression tests in
+ * `__tests__/mcp-initialize.test.ts` still drive this code path.
+ */
+var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    var desc = Object.getOwnPropertyDescriptor(m, k);
+    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+      desc = { enumerable: true, get: function() { return m[k]; } };
+    }
+    Object.defineProperty(o, k2, desc);
+}) : (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    o[k2] = m[k];
+}));
+var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
+    Object.defineProperty(o, "default", { enumerable: true, value: v });
+}) : function(o, v) {
+    o["default"] = v;
+});
+var __importStar = (this && this.__importStar) || (function () {
+    var ownKeys = function(o) {
+        ownKeys = Object.getOwnPropertyNames || function (o) {
+            var ar = [];
+            for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
+            return ar;
+        };
+        return ownKeys(o);
+    };
+    return function (mod) {
+        if (mod && mod.__esModule) return mod;
+        var result = {};
+        if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
+        __setModuleDefault(result, mod);
+        return result;
+    };
+})();
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.MCPSession = exports.PROTOCOL_VERSION = exports.SERVER_INFO = void 0;
+const path = __importStar(require("path"));
+const transport_1 = require("./transport");
+const tools_1 = require("./tools");
+const server_instructions_1 = require("./server-instructions");
+const version_1 = require("./version");
+/**
+ * MCP Server Info — kept on the session because some clients log it. The
+ * version tracks the real package version (was a hard-coded '0.1.0').
+ */
+// Exported so the proxy can answer `initialize` locally with the IDENTICAL
+// payload the daemon would send — no drift between the two handshake paths.
+exports.SERVER_INFO = {
+    name: 'codegraph',
+    version: version_1.CodeGraphPackageVersion,
+};
+/** MCP Protocol Version (latest the server claims). */
+exports.PROTOCOL_VERSION = '2024-11-05';
+/**
+ * How long to wait for the client's `roots/list` response before giving up
+ * and falling back to the process cwd.
+ */
+const ROOTS_LIST_TIMEOUT_MS = 5000;
+/**
+ * Convert a file:// URI to a filesystem path. Handles URL encoding and
+ * Windows drive letter paths.
+ */
+function fileUriToPath(uri) {
+    try {
+        const url = new URL(uri);
+        let filePath = decodeURIComponent(url.pathname);
+        if (process.platform === 'win32' && /^\/[a-zA-Z]:/.test(filePath)) {
+            filePath = filePath.slice(1);
+        }
+        return path.resolve(filePath);
+    }
+    catch {
+        return uri.replace(/^file:\/\/\/?/, '');
+    }
+}
+/** First usable filesystem path from a `roots/list` result, or null. */
+function firstRootPath(result) {
+    if (!result || typeof result !== 'object')
+        return null;
+    const roots = result.roots;
+    if (!Array.isArray(roots) || roots.length === 0)
+        return null;
+    const first = roots[0];
+    if (typeof first?.uri !== 'string')
+        return null;
+    return fileUriToPath(first.uri);
+}
+/**
+ * One MCP client's view of the server. Created fresh per stdio launch
+ * (direct mode) or per socket connection (daemon mode).
+ */
+class MCPSession {
+    transport;
+    engine;
+    clientSupportsRoots = false;
+    rootsAttempted = false;
+    resolvePromise = null;
+    explicitProjectPath;
+    constructor(transport, engine, opts = {}) {
+        this.transport = transport;
+        this.engine = engine;
+        this.explicitProjectPath = opts.explicitProjectPath ?? null;
+    }
+    /**
+     * Start handling messages from the transport. Returns immediately — the
+     * session lives for as long as the transport is open.
+     */
+    start() {
+        this.transport.start(this.handleMessage.bind(this));
+    }
+    /**
+     * Tear down the session. Does NOT touch the engine (the engine may serve
+     * other sessions) or call `process.exit` (the daemon decides when to exit).
+     */
+    stop() {
+        this.transport.stop();
+    }
+    /** Underlying transport — exposed for daemon-side close hooks. */
+    getTransport() {
+        return this.transport;
+    }
+    async handleMessage(message) {
+        const isRequest = 'id' in message;
+        switch (message.method) {
+            case 'initialize':
+                if (isRequest)
+                    await this.handleInitialize(message);
+                break;
+            case 'initialized':
+                // Notification that client has finished initialization — no action needed.
+                break;
+            case 'tools/list':
+                if (isRequest)
+                    await this.handleToolsList(message);
+                break;
+            case 'tools/call':
+                if (isRequest)
+                    await this.handleToolsCall(message);
+                break;
+            case 'ping':
+                if (isRequest)
+                    this.transport.sendResult(message.id, {});
+                break;
+            case 'resources/list':
+                // We expose no MCP resources, but some clients (opencode, Codex) probe
+                // for them on connect; reply with an empty list instead of a
+                // MethodNotFound error that surfaces as a scary `-32601` log line. (#621)
+                if (isRequest)
+                    this.transport.sendResult(message.id, { resources: [] });
+                break;
+            case 'resources/templates/list':
+                if (isRequest)
+                    this.transport.sendResult(message.id, { resourceTemplates: [] });
+                break;
+            case 'prompts/list':
+                // Likewise — no prompts exposed, but answer the probe cleanly. (#621)
+                if (isRequest)
+                    this.transport.sendResult(message.id, { prompts: [] });
+                break;
+            default:
+                if (isRequest) {
+                    this.transport.sendError(message.id, transport_1.ErrorCodes.MethodNotFound, `Method not found: ${message.method}`);
+                }
+        }
+    }
+    async handleInitialize(request) {
+        const params = request.params;
+        this.clientSupportsRoots = !!params?.capabilities?.roots;
+        // Explicit project signal, strongest first: client-provided rootUri /
+        // workspaceFolders (LSP-style), else the --path the server was launched
+        // with. cwd is NOT used here — we defer it so a roots/list answer can
+        // win over it. See issue #196.
+        let explicitPath = null;
+        if (params?.rootUri) {
+            explicitPath = fileUriToPath(params.rootUri);
+        }
+        else if (params?.workspaceFolders?.[0]?.uri) {
+            explicitPath = fileUriToPath(params.workspaceFolders[0].uri);
+        }
+        else if (this.explicitProjectPath) {
+            explicitPath = this.explicitProjectPath;
+        }
+        // Respond to the handshake BEFORE doing any heavy init — see issue #172.
+        this.transport.sendResult(request.id, {
+            protocolVersion: exports.PROTOCOL_VERSION,
+            capabilities: { tools: {} },
+            serverInfo: exports.SERVER_INFO,
+            instructions: server_instructions_1.SERVER_INSTRUCTIONS,
+        });
+        if (explicitPath) {
+            // Kick off engine init in the background. If another session in the
+            // same daemon already opened the project, `ensureInitialized` is a
+            // ~free no-op — N concurrent clients pay exactly one open.
+            this.resolvePromise = this.engine.ensureInitialized(explicitPath);
+        }
+    }
+    async handleToolsList(request) {
+        await this.retryInitIfNeeded();
+        this.transport.sendResult(request.id, {
+            tools: this.engine.getToolHandler().getTools(),
+        });
+    }
+    async handleToolsCall(request) {
+        const params = request.params;
+        if (!params || !params.name) {
+            this.transport.sendError(request.id, transport_1.ErrorCodes.InvalidParams, 'Missing tool name');
+            return;
+        }
+        const toolName = params.name;
+        const toolArgs = params.arguments || {};
+        const tool = tools_1.tools.find((t) => t.name === toolName);
+        if (!tool) {
+            this.transport.sendError(request.id, transport_1.ErrorCodes.InvalidParams, `Unknown tool: ${toolName}`);
+            return;
+        }
+        await this.retryInitIfNeeded();
+        const result = await this.engine.getToolHandler().execute(toolName, toolArgs);
+        this.transport.sendResult(request.id, result);
+    }
+    /**
+     * Lazy default-project resolution. Three layers:
+     *   1. await the in-flight init kicked off from `handleInitialize` (if any);
+     *   2. if still uninitialized and we never asked the client for its roots,
+     *      do so now (one-shot); fall back to cwd if the client lacks roots;
+     *   3. last-resort: re-walk from the best candidate — picks up projects
+     *      that were `codegraph init`'d *after* the server started.
+     */
+    async retryInitIfNeeded() {
+        if (this.resolvePromise) {
+            try {
+                await this.resolvePromise;
+            }
+            catch { /* fall through to retry */ }
+            this.resolvePromise = null;
+        }
+        if (this.engine.hasDefaultCodeGraph())
+            return;
+        const hint = this.explicitProjectPath ?? this.engine.getProjectPath();
+        if (!hint && !this.rootsAttempted) {
+            this.rootsAttempted = true;
+            this.resolvePromise = this.clientSupportsRoots
+                ? this.initFromRoots()
+                : this.engine.ensureInitialized(process.cwd());
+            try {
+                await this.resolvePromise;
+            }
+            catch { /* fall through */ }
+            this.resolvePromise = null;
+            if (this.engine.hasDefaultCodeGraph())
+                return;
+        }
+        // Last resort: walk from the best candidate (sync open). Picks up
+        // projects that appeared after the server started.
+        const candidate = hint ?? process.cwd();
+        this.engine.retryInitializeSync(candidate);
+    }
+    /**
+     * Ask the client for its workspace root via `roots/list` and open the
+     * first one. Falls back to `process.cwd()` on timeout or empty answer.
+     */
+    async initFromRoots() {
+        let target = process.cwd();
+        try {
+            const result = await this.transport.request('roots/list', undefined, ROOTS_LIST_TIMEOUT_MS);
+            const rootPath = firstRootPath(result);
+            if (rootPath) {
+                target = rootPath;
+            }
+            else {
+                process.stderr.write('[CodeGraph MCP] Client returned no workspace roots; falling back to process cwd.\n');
+            }
+        }
+        catch (err) {
+            const msg = err instanceof Error ? err.message : String(err);
+            process.stderr.write(`[CodeGraph MCP] roots/list request failed (${msg}); falling back to process cwd.\n`);
+        }
+        await this.engine.ensureInitialized(target);
+    }
+}
+exports.MCPSession = MCPSession;
+//# sourceMappingURL=session.js.map

package/dist/mcp/session.js.map

@@ -0,0 +1 @@
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