@stigmer/runner 3.39.1-dev.20260928194002 → 3.40.1

package/README.md

@@ -176,7 +176,7 @@ All configuration is environment-driven. Names and defaults below are verified a
 |----------|-----------|----------|---------|---------|
 | `ARTIFACT_STORAGE_TYPE` | All | No | `proxy` if `STIGMER_PROXY_ENDPOINT` is set, else `local` | Selects the artifact backend: `local` (filesystem, served by the Stigmer backend) or `proxy` (presigned URLs via the proxy). An explicit value always wins. Storage follows transport, not execution location. |
 | `LOCAL_ARTIFACT_PATH` | Local storage | No | `~/.stigmer/data/artifacts` | Filesystem root of the local artifact store. **Must equal the stigmer-server's `ARTIFACT_LOCAL_BASE_PATH`** — in local mode the server writes an artifact to `<ARTIFACT_LOCAL_BASE_PATH>/<key>` and the runner reads it from `<LOCAL_ARTIFACT_PATH>/<key>`, so a mismatch makes every storage-key attachment and offload fail to resolve. The defaults align out of the box; the CLI local daemon sets both explicitly. |
-| `LOCAL_ARTIFACT_SERVE_URL` | Local storage | No | `http://localhost:7235` | Base URL of the server's artifact HTTP file server (its `ARTIFACT_HTTP_PORT`, default `GRPC_PORT + 1`). Used for blob downloads; the runner's own read-back goes straight to disk. |
+| `LOCAL_ARTIFACT_SERVE_URL` | Local storage | No | `http://localhost:7235` | Base URL of the server's artifact HTTP file server (its `ARTIFACT_HTTP_PORT`, default `GRPC_PORT + 1`, or an ephemeral port the server's boot log names when `GRPC_PORT` is 0). Used for blob downloads; the runner's own read-back goes straight to disk. |
 
 ### Payload encryption (Temporal history at rest)
 

package/dist/.build-fingerprint

@@ -1 +1 @@
-{"hash":"66631b1462bf3d2d","builtAt":"2026-09-28T19:42:09.482Z","fileCount":336}
+{"hash":"45461275395af5f1","builtAt":"2026-09-29T00:28:45.200Z","fileCount":335}

package/dist/activities/execute-deep-agent/prompt-builder.d.ts

@@ -1,19 +1,32 @@
 /**
- * The native harness's system prompt: what `createDeepAgent` receives as
- * `systemPrompt`, rebuilt on EVERY invocation (never checkpointed with the
- * message history), so every standing fact is injected on every turn by
- * design — a first-turn-only injection would vanish from turn 2 onward.
+ * The native harness's prompt: the system prompt `createDeepAgent` receives
+ * as `systemPrompt`, and the turn's user message.
+ *
+ * The system prompt is rebuilt on EVERY invocation (never checkpointed with
+ * the message history), so every standing fact is injected on every turn by
+ * design — a first-turn-only injection would vanish from turn 2 onward. It is
+ * a function of the session and of the execution's settings (its mode), never
+ * of the turn. The provider caches tools, system and messages as one prefix,
+ * so a system byte that follows the message re-writes the cached prompt and
+ * the whole conversation after it, on every turn, at the cache-write price.
+ * What belongs to one turn — its input files, the workspace paths it
+ * references, the conversation catchup — rides that turn's user message
+ * (`composeUserMessage`), which enters the checkpointer with the turn and
+ * stays in history. That is the Cursor harness's resumed-turn placement
+ * (`execute-cursor/prompt-builder.ts` `buildPrompt`) and the runner's rule
+ * that user content goes in user messages, never the system prompt.
  *
  * Pure functions: no side effects, no I/O. `turn-setup.ts` gathers the
  * inputs from the runtime's resolved record and this module renders them.
  *
  * What is this harness's and what is shared (since #1096):
  *  - Shared through `shared/prompt-sections.ts`: WHICH standing sections
- *    render and in WHAT order (`standingContextSections`), the input-files
- *    bullet and disclosure lines (`inputFileLines`), which skills a prompt
- *    highlights (`selectSkillsForPrompt`, called from `turn-setup.ts`) and
- *    the also-available sentence. Their WORDS come from each fact's own
- *    module; this builder only frames them.
+ *    render and in WHAT order (`standingContextSections`) and the
+ *    input-files bullet and disclosure lines (`inputFileLines`). Their WORDS
+ *    come from each fact's own module; this builder only frames them. Every
+ *    mounted skill is described on every turn, as the Cursor harness does:
+ *    choosing skills by the message made the system prompt follow the
+ *    message.
  *  - This harness's: the framing — `## Heading` markdown sections, the house
  *    style for a system prompt — and every text that quotes this engine's
  *    tools: the `## Skills` activation protocol, the response rules, the
@@ -24,7 +37,8 @@
  *
  * The rendered bytes are load-bearing for the hermetic tests: `ScriptedModel`
  * tells its scripted roles apart by the system prompt's text, so this
- * module's whole output is pinned by `__tests__/prompt-goldens.test.ts`.
+ * module's whole output — the system prompt and the turn's message — is
+ * pinned by `__tests__/prompt-goldens.test.ts`.
  */
 import { InteractionMode } from "@stigmer/protos/ai/stigmer/agentic/agentexecution/v1/enum_pb";
 import type { ProvisionResult } from "../../shared/workspace/types.js";
@@ -47,22 +61,6 @@ export interface PromptBuilderInput {
      * when the agent serves no proactive channel or nothing is sendable.
      */
     channelTemplatesPromptSection?: string;
-    workspaceFileRefs: string[];
-    workspaceRoot: string;
-    /** The turn's resolved input files, as the runtime's attachment phase returns them. */
-    inputFiles: readonly ResolvedAttachment[];
-    /**
-     * Vision facts about this turn's attachments (T04): which images the model
-     * sees inline in the user message and which degraded to path-only.
-     * Rendered inside the Input Files section.
-     */
-    vision?: VisionPromptInfo;
-    /**
-     * What kind of URL the turn's storage backend mints (issue #532) — keys
-     * the Input Files section's hand-off wording (attachment-download-urls.ts).
-     * One turn-level fact: all attachments ride the one configured storage.
-     */
-    downloadUrlKind?: DownloadUrlKind;
     /**
      * The execution's interaction mode. PLAN appends the shared plan-mode
      * directive so the model knows the turn's deliverable is a plan document.
@@ -79,6 +77,14 @@ export interface PromptBuilderInput {
      * message itself is just a short label ("Build from plan").
      */
     buildFromPlan?: boolean;
+    /**
+     * The approved plan's path among the turn's input files
+     * (`implement-plan-prompt.ts` `findApprovedPlanPath`), read only under
+     * `buildFromPlan`. Absent when the plan did not materialize, which selects
+     * the directive's conversation-plan variant. The Input Files section
+     * itself rides the turn's message (`composeUserMessage`).
+     */
+    approvedPlanPath?: string;
     /**
      * Rollover context bridge (cloud DD-013): a digest of the previous
      * session's conversation, read from `SessionSpec.metadata`. Injected on
@@ -128,17 +134,46 @@ export type { VisionPromptInfo };
  * sections. Pure function with no I/O.
  */
 export declare function buildEnhancedSystemPrompt(input: PromptBuilderInput): string;
+/** The turn's own content, composed around what the user typed. */
+export interface TurnMessageInput {
+    /** What the user typed (`spec.message`); never mutated. */
+    readonly message: string;
+    /** The conversation catchup digest (cloud DD-006), when the turn carries one. */
+    readonly conversationCatchup?: string;
+    /** This turn's resolved input files, as the runtime's attachment phase returns them. */
+    readonly inputFiles: readonly ResolvedAttachment[];
+    /**
+     * Vision facts about this turn's attachments (T04): which images the model
+     * sees inline in this same message and which degraded to path-only.
+     * Rendered inside the Input Files section.
+     */
+    readonly vision?: VisionPromptInfo;
+    /**
+     * What kind of URL the turn's storage backend mints (issue #532) — keys
+     * the Input Files section's hand-off wording (attachment-download-urls.ts).
+     * One turn-level fact: all attachments ride the one configured storage.
+     */
+    readonly downloadUrlKind?: DownloadUrlKind;
+    /** The workspace paths the user highlighted for this message (`spec.workspace_file_refs`). */
+    readonly workspaceFileRefs: readonly string[];
+}
 /**
- * Compose the turn's USER MESSAGE for the graph invocation: the framed
- * conversation catchup (cloud DD-006), when present, prepended to the
- * customer's message. In the user message and never the system prompt (A27):
- * the system prompt is rebuilt per invocation and would forget the digest one
- * turn later, while a message enters the checkpointer with the turn and
- * persists in history — the same durability the cursor harness gets from its
- * prompt prefix. The caller's `spec.message` is never mutated; the prepend
- * exists only in the graph input.
+ * Compose the turn's USER MESSAGE for the graph invocation: this turn's
+ * payload (its input files, then the workspace paths it references), then the
+ * framed conversation catchup (cloud DD-006), then what the user typed, each
+ * set off by a horizontal rule. Payload first and context closest to the task
+ * is the Cursor harness's resumed-turn order.
+ *
+ * In the user message and never the system prompt (A27, and the module
+ * header): the system prompt is rebuilt per invocation, so a turn's content
+ * there would vanish one turn later and, while it lasted, change the cached
+ * prefix; a message enters the checkpointer with the turn and persists in
+ * history, so a later turn still knows which files an earlier one carried.
+ * An approval resume sends no new message and needs none: the payload is
+ * already in the checkpointed one. The caller's `spec.message` is never
+ * mutated; the composition exists only in the graph input.
  */
-export declare function composeUserMessage(message: string, conversationCatchup: string | undefined): string;
+export declare function composeUserMessage(input: TurnMessageInput): string;
 /**
  * The `## Skills` section of this harness's system prompt, rendered from the
  * runtime's mounted-skill metadata (`shared/skill-resolver.ts`

package/dist/activities/execute-deep-agent/prompt-builder.js

@@ -1,19 +1,32 @@
 /**
- * The native harness's system prompt: what `createDeepAgent` receives as
- * `systemPrompt`, rebuilt on EVERY invocation (never checkpointed with the
- * message history), so every standing fact is injected on every turn by
- * design — a first-turn-only injection would vanish from turn 2 onward.
+ * The native harness's prompt: the system prompt `createDeepAgent` receives
+ * as `systemPrompt`, and the turn's user message.
+ *
+ * The system prompt is rebuilt on EVERY invocation (never checkpointed with
+ * the message history), so every standing fact is injected on every turn by
+ * design — a first-turn-only injection would vanish from turn 2 onward. It is
+ * a function of the session and of the execution's settings (its mode), never
+ * of the turn. The provider caches tools, system and messages as one prefix,
+ * so a system byte that follows the message re-writes the cached prompt and
+ * the whole conversation after it, on every turn, at the cache-write price.
+ * What belongs to one turn — its input files, the workspace paths it
+ * references, the conversation catchup — rides that turn's user message
+ * (`composeUserMessage`), which enters the checkpointer with the turn and
+ * stays in history. That is the Cursor harness's resumed-turn placement
+ * (`execute-cursor/prompt-builder.ts` `buildPrompt`) and the runner's rule
+ * that user content goes in user messages, never the system prompt.
  *
  * Pure functions: no side effects, no I/O. `turn-setup.ts` gathers the
  * inputs from the runtime's resolved record and this module renders them.
  *
  * What is this harness's and what is shared (since #1096):
  *  - Shared through `shared/prompt-sections.ts`: WHICH standing sections
- *    render and in WHAT order (`standingContextSections`), the input-files
- *    bullet and disclosure lines (`inputFileLines`), which skills a prompt
- *    highlights (`selectSkillsForPrompt`, called from `turn-setup.ts`) and
- *    the also-available sentence. Their WORDS come from each fact's own
- *    module; this builder only frames them.
+ *    render and in WHAT order (`standingContextSections`) and the
+ *    input-files bullet and disclosure lines (`inputFileLines`). Their WORDS
+ *    come from each fact's own module; this builder only frames them. Every
+ *    mounted skill is described on every turn, as the Cursor harness does:
+ *    choosing skills by the message made the system prompt follow the
+ *    message.
  *  - This harness's: the framing — `## Heading` markdown sections, the house
  *    style for a system prompt — and every text that quotes this engine's
  *    tools: the `## Skills` activation protocol, the response rules, the
@@ -24,7 +37,8 @@
  *
  * The rendered bytes are load-bearing for the hermetic tests: `ScriptedModel`
  * tells its scripted roles apart by the system prompt's text, so this
- * module's whole output is pinned by `__tests__/prompt-goldens.test.ts`.
+ * module's whole output — the system prompt and the turn's message — is
+ * pinned by `__tests__/prompt-goldens.test.ts`.
  */
 import { relative } from "node:path";
 import { InteractionMode } from "@stigmer/protos/ai/stigmer/agentic/agentexecution/v1/enum_pb";
@@ -32,7 +46,7 @@ import { formatConversationCatchupText } from "../../shared/conversation-catchup
 import { inputFileLines, standingContextSections, } from "../../shared/prompt-sections.js";
 import { effectiveInstructions } from "../../shared/builtin-assistant-prompt.js";
 import { PLAN_MODE_DIRECTIVE } from "../../shared/plan-mode-prompt.js";
-import { buildImplementPlanDirective, findApprovedPlanPath, } from "../../shared/implement-plan-prompt.js";
+import { buildImplementPlanDirective } from "../../shared/implement-plan-prompt.js";
 import { STIGMER_LOCAL_STATE_DIR } from "../../shared/workspace/stigmer-link.js";
 import { DEFAULT_MAX_CONCURRENT } from "../../shared/subagent-gate.js";
 import { ENGINE_TOOL } from "./engine-tools.js";
@@ -127,15 +141,6 @@ export function buildEnhancedSystemPrompt(input) {
     if (input.channelTemplatesPromptSection) {
         prompt += "\n\n" + input.channelTemplatesPromptSection;
     }
-    if (input.workspaceFileRefs.length > 0) {
-        const refSection = buildReferencedFilesSection(input.workspaceFileRefs, input.workspaceRoot);
-        if (refSection) {
-            prompt += refSection;
-        }
-    }
-    if (input.inputFiles.length > 0) {
-        prompt += buildInputFilesSection(input.inputFiles, input.vision, input.downloadUrlKind);
-    }
     // The standing context, in the shared order (the doctrine is stated once,
     // on `standingContextSections`); this harness only frames each section.
     for (const section of standingContextSections(input)) {
@@ -161,27 +166,41 @@ export function buildEnhancedSystemPrompt(input) {
                 "`.stigmer/` directory); paths outside it are refused.";
     }
     if (input.buildFromPlan) {
-        const planPath = findApprovedPlanPath(input.inputFiles.map((f) => f.relativePath));
         prompt +=
             "\n\n## Implement the approved plan\n\n" +
-                buildImplementPlanDirective(planPath);
+                buildImplementPlanDirective(input.approvedPlanPath);
     }
     return prompt;
 }
 /**
- * Compose the turn's USER MESSAGE for the graph invocation: the framed
- * conversation catchup (cloud DD-006), when present, prepended to the
- * customer's message. In the user message and never the system prompt (A27):
- * the system prompt is rebuilt per invocation and would forget the digest one
- * turn later, while a message enters the checkpointer with the turn and
- * persists in history — the same durability the cursor harness gets from its
- * prompt prefix. The caller's `spec.message` is never mutated; the prepend
- * exists only in the graph input.
+ * Compose the turn's USER MESSAGE for the graph invocation: this turn's
+ * payload (its input files, then the workspace paths it references), then the
+ * framed conversation catchup (cloud DD-006), then what the user typed, each
+ * set off by a horizontal rule. Payload first and context closest to the task
+ * is the Cursor harness's resumed-turn order.
+ *
+ * In the user message and never the system prompt (A27, and the module
+ * header): the system prompt is rebuilt per invocation, so a turn's content
+ * there would vanish one turn later and, while it lasted, change the cached
+ * prefix; a message enters the checkpointer with the turn and persists in
+ * history, so a later turn still knows which files an earlier one carried.
+ * An approval resume sends no new message and needs none: the payload is
+ * already in the checkpointed one. The caller's `spec.message` is never
+ * mutated; the composition exists only in the graph input.
  */
-export function composeUserMessage(message, conversationCatchup) {
-    return conversationCatchup
-        ? `${formatConversationCatchupText(conversationCatchup)}\n\n---\n\n${message}`
-        : message;
+export function composeUserMessage(input) {
+    const parts = [];
+    if (input.inputFiles.length > 0) {
+        parts.push(buildInputFilesSection(input.inputFiles, input.vision, input.downloadUrlKind));
+    }
+    if (input.workspaceFileRefs.length > 0) {
+        parts.push(buildReferencedFilesSection(input.workspaceFileRefs));
+    }
+    if (input.conversationCatchup) {
+        parts.push(formatConversationCatchupText(input.conversationCatchup));
+    }
+    parts.push(input.message);
+    return parts.join("\n\n---\n\n");
 }
 /**
  * The `## Skills` section of this harness's system prompt, rendered from the
@@ -292,13 +311,13 @@ function formatEntryDescription(result) {
             "You are operating directly on the user's files — changes are " +
             "immediate and persistent. Use git to track and verify your changes.");
     }
+    // No commit: the clone's HEAD moves with every write-back commit, and a
+    // system prompt that names it would change on every such turn
+    // (`shared/workspace/sources/git.ts` says the same for one entry).
     if (result.sourceType === "git_repo" && result.gitMetadata) {
         const meta = result.gitMetadata;
-        const shortSha = meta.baseCommit.length >= 7
-            ? meta.baseCommit.slice(0, 7)
-            : meta.baseCommit;
-        return (`Workspace entry **${name}** was initialized from ` +
-            `${meta.repoUrl} (branch: ${meta.branch}, commit: ${shortSha}).\n` +
+        const branch = meta.branch ? ` (branch: ${meta.branch})` : "";
+        return (`Workspace entry **${name}** was initialized from ${meta.repoUrl}${branch}.\n` +
             "Changes you make will be captured as artifacts when execution completes.");
     }
     if (result.sourceType === "empty") {
@@ -307,25 +326,22 @@ function formatEntryDescription(result) {
     }
     return result.workspaceDescription;
 }
-function buildReferencedFilesSection(workspaceFileRefs, _workspaceRoot) {
-    if (workspaceFileRefs.length === 0)
-        return "";
-    let section = "\n\n## Referenced Files\n\n" +
+/** The `## Referenced Files` part of the turn's message: the paths the user highlighted, one bullet each. */
+function buildReferencedFilesSection(workspaceFileRefs) {
+    return ("## Referenced Files\n\n" +
         "The user has highlighted the following workspace paths for your " +
-        `attention. Use \`${ENGINE_TOOL.readFile}\` to access file contents.\n\n`;
-    for (const refPath of workspaceFileRefs) {
-        section += `- \`${refPath}\`\n`;
-    }
-    return section;
+        `attention. Use \`${ENGINE_TOOL.readFile}\` to access file contents.\n\n` +
+        workspaceFileRefs.map((refPath) => `- \`${refPath}\``).join("\n"));
 }
 /**
- * The `## Input Files` section: this harness's intro (it names this engine's
- * file-reading tool) around the shared lines (`prompt-sections.ts` `inputFileLines`
- * says what each bullet and disclosure carries and why). Each disclosure
- * group is set off by a blank line, the markdown idiom.
+ * The `## Input Files` part of the turn's message: this harness's intro (it
+ * names this engine's file-reading tool) around the shared lines
+ * (`prompt-sections.ts` `inputFileLines` says what each bullet and disclosure
+ * carries and why). Each disclosure group is set off by a blank line, the
+ * markdown idiom.
  */
 function buildInputFilesSection(files, vision, downloadUrlKind) {
-    let section = "\n\n## Input Files\n\n";
+    let section = "## Input Files\n\n";
     section +=
         "The following files have been provided as read-only reference " +
             "material for your task. They live under `.stigmer/inputs/` and " +
@@ -344,8 +360,7 @@ function buildInputFilesSection(files, vision, downloadUrlKind) {
     if (lines.vision.length > 0) {
         section += "\n" + lines.vision.join("\n") + "\n";
     }
-    // Every section opens with its own blank line ("\n\n## ..."), so this one
-    // ends on its last line rather than adding a second blank (#1127).
+    // The part ends on its last line; the message's rule sets it off (#1127).
     return section.replace(/\n+$/, "");
 }
 //# sourceMappingURL=prompt-builder.js.map

package/dist/activities/execute-deep-agent/prompt-builder.js.map

@@ -1 +1 @@
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package/dist/activities/execute-deep-agent/turn-setup.d.ts

@@ -155,16 +155,6 @@ export declare function connectTools(input: TurnInput, sink: TurnSink): Promise<
  * the gate. Both flow into sub-agents via the shared gate config.
  */
 export declare function readGateState(input: TurnInput, tools: DeepAgentTools): DeepAgentGateState;
-/**
- * The `## Skills` section of the root prompt: the skills the shared selection
- * highlights for this turn's message (`shared/prompt-sections.ts`
- * `selectSkillsForPrompt`: every skill below the threshold, the relevant ones
- * at and above it), rendered with this engine's activation protocol, plus —
- * when the selection left any out — an `### Also Available` note naming them
- * (the sentence is the shared, tool-neutral one; the heading is this
- * harness's markdown framing).
- */
-export declare function renderRootSkillsSection(input: TurnInput): string;
 /**
  * The system prompt over the runtime's resolved record: every input the
  * builder renders is read from `TurnInput` here, in one place, so the mapping
@@ -173,8 +163,22 @@ export declare function renderRootSkillsSection(input: TurnInput): string;
  * that is not on the record is the memoized memory selection, which the
  * caller awaits (the runtime stamps the report on the status the first time
  * it is pulled, before this turn's first persist).
+ *
+ * Nothing here reads the turn's message or payload: the system prompt is the
+ * session's (`prompt-builder.ts` says why), so every mounted skill is
+ * described and the turn's files ride its message (`composeTurnMessage`).
+ * The approved plan's path is the one fact taken from the attachments, and
+ * only on a build-from-plan turn, where the mode already changes the prompt.
  */
 export declare function composeSystemPrompt(input: TurnInput, recalledMemories: RecalledMemoriesContent | undefined): string;
+/**
+ * The turn's user message over the runtime's resolved record: what the user
+ * typed, with this turn's payload (its input files and referenced paths) and
+ * the conversation catchup composed around it (`prompt-builder.ts`
+ * `composeUserMessage`). The twin of `composeSystemPrompt` for the turn's
+ * half, so the goldens pin this mapping and not a copy of it.
+ */
+export declare function composeTurnMessage(input: TurnInput): string;
 /**
  * Build the engine: the model, the middleware stack with the gate, the
  * tools, the compiled sub-agents, the system prompt and `createDeepAgent`.
@@ -204,9 +208,10 @@ export declare function buildEngine(input: TurnInput, sink: TurnSink, config: De
  * What the graph is invoked with. The checkpoint is read once (on the
  * durable http saver an extra `getState` is a network round-trip): pending
  * interrupts that the runtime's decisions answer make a `Command(resume)`;
- * anything else is the turn's user message — the conversation catchup
- * framed before it (cloud DD-006; in the USER MESSAGE so it enters the
- * checkpointer with the turn), the structured-output contract appended, and
+ * anything else is the turn's user message — this turn's payload and the
+ * conversation catchup framed before it (`composeTurnMessage`; in the USER
+ * MESSAGE so it enters the checkpointer with the turn and the system prompt
+ * stays the session's), the structured-output contract appended, and
  * the inline images FIRST as content blocks when the turn carries any (per
  * Anthropic's images-before-text guidance; a plain string otherwise).
  */

package/dist/activities/execute-deep-agent/turn-setup.js

@@ -57,7 +57,8 @@ import { getDefaultModel, getNativeRequestProfile } from "../../shared/model-reg
 import { buildChatModel } from "../../shared/model-client.js";
 import { graphThinks, toAnthropicThinking } from "../../shared/thinking-mode.js";
 import { isUnattendedApprovalMode } from "../../shared/approval-policy.js";
-import { alsoAvailableSkillsNote, selectSkillsForPrompt, visionPromptInfoOf } from "../../shared/prompt-sections.js";
+import { visionPromptInfoOf } from "../../shared/prompt-sections.js";
+import { findApprovedPlanPath } from "../../shared/implement-plan-prompt.js";
 import { toLangChainImageBlocks } from "../../shared/attachment-vision.js";
 import { resolveRecursionLimit, UNBOUNDED_ADVISORY_RECURSION_LIMIT } from "../../shared/tool-rounds.js";
 import { jsonSchemaToZod } from "../../shared/json-schema-to-zod.js";
@@ -171,23 +172,6 @@ export function readGateState(input, tools) {
         unattendedSkips: new Set(),
     };
 }
-/**
- * The `## Skills` section of the root prompt: the skills the shared selection
- * highlights for this turn's message (`shared/prompt-sections.ts`
- * `selectSkillsForPrompt`: every skill below the threshold, the relevant ones
- * at and above it), rendered with this engine's activation protocol, plus —
- * when the selection left any out — an `### Also Available` note naming them
- * (the sentence is the shared, tool-neutral one; the heading is this
- * harness's markdown framing).
- */
-export function renderRootSkillsSection(input) {
-    const { highlighted, alsoAvailable } = selectSkillsForPrompt(input.execution.spec?.message ?? "", input.skills.root);
-    if (alsoAvailable.length === 0)
-        return renderSkillsSection(highlighted);
-    console.log(`[turn-setup] Skill relevance filter: ${highlighted.length} included, ` +
-        `${alsoAvailable.length} excluded: ${alsoAvailable.join(", ")}`);
-    return renderSkillsSection(highlighted) + "\n### Also Available\n\n" + alsoAvailableSkillsNote(alsoAvailable) + "\n";
-}
 /**
  * The system prompt over the runtime's resolved record: every input the
  * builder renders is read from `TurnInput` here, in one place, so the mapping
@@ -196,6 +180,12 @@ export function renderRootSkillsSection(input) {
  * that is not on the record is the memoized memory selection, which the
  * caller awaits (the runtime stamps the report on the status the first time
  * it is pulled, before this turn's first persist).
+ *
+ * Nothing here reads the turn's message or payload: the system prompt is the
+ * session's (`prompt-builder.ts` says why), so every mounted skill is
+ * described and the turn's files ride its message (`composeTurnMessage`).
+ * The approved plan's path is the one fact taken from the attachments, and
+ * only on a build-from-plan turn, where the mode already changes the prompt.
  */
 export function composeSystemPrompt(input, recalledMemories) {
     const spec = input.execution.spec;
@@ -205,19 +195,17 @@ export function composeSystemPrompt(input, recalledMemories) {
         instructions: input.blueprint.instructions,
         provisionResults: input.workspace.provision.provisionResults,
         containerRoot: primaryDir,
-        skillsPromptSection: renderRootSkillsSection(input),
+        skillsPromptSection: renderSkillsSection(input.skills.root),
         // "" (nothing sendable) threads as undefined: the tool alone still serves
         // text sends inside a 24-hour window (DD-006 D6).
         channelTemplatesPromptSection: input.mcp.channelMessaging.length > 0
             ? formatChannelTemplatesSection(input.mcp.channelMessaging) || undefined
             : undefined,
-        workspaceFileRefs: spec.workspaceFileRefs ?? [],
-        workspaceRoot: primaryDir,
-        inputFiles: input.attachments.results,
-        vision: visionPromptInfoOf(input.attachments),
-        downloadUrlKind: input.artifactStorage?.downloadUrlKind,
         interactionMode: execConfig?.interactionMode,
         buildFromPlan: execConfig?.buildFromPlan,
+        ...(execConfig?.buildFromPlan
+            ? { approvedPlanPath: findApprovedPlanPath(input.attachments.results.map((f) => f.relativePath)) }
+            : {}),
         contextBridge: input.standing.contextBridge,
         senderIdentity: input.standing.senderIdentity,
         sessionContext: input.standing.sessionContext,
@@ -225,6 +213,24 @@ export function composeSystemPrompt(input, recalledMemories) {
         recalledMemories,
     });
 }
+/**
+ * The turn's user message over the runtime's resolved record: what the user
+ * typed, with this turn's payload (its input files and referenced paths) and
+ * the conversation catchup composed around it (`prompt-builder.ts`
+ * `composeUserMessage`). The twin of `composeSystemPrompt` for the turn's
+ * half, so the goldens pin this mapping and not a copy of it.
+ */
+export function composeTurnMessage(input) {
+    const spec = input.execution.spec;
+    return composeUserMessage({
+        message: spec.message,
+        conversationCatchup: input.standing.conversationCatchup,
+        inputFiles: input.attachments.results,
+        vision: visionPromptInfoOf(input.attachments),
+        downloadUrlKind: input.artifactStorage?.downloadUrlKind,
+        workspaceFileRefs: spec.workspaceFileRefs ?? [],
+    });
+}
 /**
  * Build the engine: the model, the middleware stack with the gate, the
  * tools, the compiled sub-agents, the system prompt and `createDeepAgent`.
@@ -456,9 +462,10 @@ export async function buildEngine(input, sink, config, args) {
  * What the graph is invoked with. The checkpoint is read once (on the
  * durable http saver an extra `getState` is a network round-trip): pending
  * interrupts that the runtime's decisions answer make a `Command(resume)`;
- * anything else is the turn's user message — the conversation catchup
- * framed before it (cloud DD-006; in the USER MESSAGE so it enters the
- * checkpointer with the turn), the structured-output contract appended, and
+ * anything else is the turn's user message — this turn's payload and the
+ * conversation catchup framed before it (`composeTurnMessage`; in the USER
+ * MESSAGE so it enters the checkpointer with the turn and the system prompt
+ * stays the session's), the structured-output contract appended, and
  * the inline images FIRST as content blocks when the turn carries any (per
  * Anthropic's images-before-text guidance; a plain string otherwise).
  */
@@ -468,8 +475,7 @@ export async function composeGraphInput(input, engine) {
     if (resume.isResumeFromApproval) {
         return { kind: "resume", command: resume.graphInput };
     }
-    const spec = input.execution.spec;
-    let userMessage = composeUserMessage(spec.message, input.standing.conversationCatchup);
+    let userMessage = composeTurnMessage(input);
     if (engine.hasStructuredOutput) {
         userMessage += `\n\n---\nIMPORTANT: When your analysis is complete, provide your findings as structured output matching the required schema. The system will capture your structured response automatically.`;
     }