@stdlib/stats-wilcoxon 0.0.6 → 0.1.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/CITATION.cff +30 -0
- package/LICENSE +0 -304
- package/NOTICE +1 -1
- package/README.md +53 -5
- package/dist/index.d.ts +3 -0
- package/dist/index.js +11 -0
- package/dist/index.js.map +7 -0
- package/docs/types/index.d.ts +1 -1
- package/lib/index.js +2 -2
- package/lib/main.js +12 -11
- package/lib/print.js +8 -7
- package/lib/validate.js +11 -10
- package/package.json +32 -30
- package/docs/repl.txt +0 -182
- package/docs/types/test.ts +0 -165
package/CITATION.cff
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cff-version: 1.2.0
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title: stdlib
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message: >-
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If you use this software, please cite it using the
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metadata from this file.
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type: software
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authors:
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- name: The Stdlib Authors
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url: https://github.com/stdlib-js/stdlib/graphs/contributors
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repository-code: https://github.com/stdlib-js/stdlib
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url: https://stdlib.io
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abstract: |
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Standard library for JavaScript and Node.js.
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keywords:
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- JavaScript
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- Node.js
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- TypeScript
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- standard library
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- scientific computing
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- numerical computing
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- statistical computing
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license: Apache-2.0 AND BSL-1.0
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date-released: 2016
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package/LICENSE
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of your accepting any such warranty or additional liability.
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END OF TERMS AND CONDITIONS
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* OpenBLAS <https://raw.githubusercontent.com/xianyi/OpenBLAS/
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* Boost <http://www.boost.org/LICENSE_1_0.txt>
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* Cephes <http://www.netlib.org/cephes/readme>
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Copyright (c) 1984-2000 Stephen L. Moshier
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Some software in this archive may be from the book _Methods and Programs for
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Mathematical Functions_ (Prentice-Hall or Simon & Schuster International, 1989)
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or from the Cephes Mathematical Library, a commercial product. In either event,
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it is copyrighted by the author. What you see here may be used freely but it
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Stephen L. Moshier
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* FreeBSD <https://svnweb.freebsd.org/>
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var N=require('@stdlib/assert-contains/dist'),_=require('@stdlib/assert-is-boolean/dist').isPrimitive,B=require('@stdlib/assert-is-number/dist').isPrimitive,te=require('@stdlib/assert-is-plain-object/dist'),C=require('@stdlib/assert-is-string/dist').isPrimitive,j=require('@stdlib/assert-is-nan/dist'),E=require('@stdlib/assert-has-own-property/dist'),d=require('@stdlib/error-tools-fmtprodmsg/dist'),I=["two-sided","less","greater"],U=["pratt","wilcox","zsplit"];function ne(e,i){if(!te(i))return new TypeError(d('1Lx2V',i));if(E(i,"alpha")){if(e.alpha=i.alpha,!B(e.alpha)||j(e.alpha))return new TypeError(d('1Lx8P',"alpha",e.alpha));if(e.alpha<0||e.alpha>1)return new RangeError(d('1Lx8V',"alpha",e.alpha));}if(E(i,"alternative")){if(e.alternative=i.alternative,!C(e.alternative))return new TypeError(d('1Lx2W',"alternative",e.alternative));if(!N(I,e.alternative))return new Error(d('1Lx4S',"alternative",I.join('", "'),e.alternative));}if(E(i,"correction")&&(e.correction=i.correction,!_(e.correction)||j(e.correction)))return new TypeError(d('1Lx2o',"correction",e.alpha));if(E(i,"exact")&&(e.exact=i.exact,!_(e.exact)||j(e.exact)))return new TypeError(d('1Lx2o',"exact",e.alpha));if(E(i,"mu")&&(e.mu=i.mu,!B(e.mu)||j(e.mu)))return new TypeError(d('1Lx8P',"mu",e.mu));if(E(i,"zeroMethod")){if(e.zeroMethod=i.zeroMethod,!C(e.zeroMethod))return new TypeError(d('1Lx2W',"zeroMethod",e.alternative));if(!N(U,e.zeroMethod))return new Error(d('1Lx4S',"zeroMethod",U.join('", "'),e.zeroMethod));}return null}W.exports=ne
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function oe(e,i){return e-i}function se(e){var i,o,a,u;for(e=e.slice(),e.sort(oe),i=e.length,a=1,u=0;a<i;a++)o=e[a],e[u]!==o&&(u+=1,e[u]=o);return e.length=u+1,e}Z.exports=se
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var le=require('@stdlib/assert-is-positive-integer/dist'),ue=require('@stdlib/assert-is-plain-object/dist'),ve=require('@stdlib/assert-is-boolean/dist').isPrimitive,J=require('@stdlib/assert-has-own-property/dist'),K=require('@stdlib/math-base-special-roundn/dist'),D=require('@stdlib/error-tools-fmtprodmsg/dist');function fe(e){var i,o,a;if(o=4,i=!0,arguments.length>0){if(!ue(e))throw new TypeError(D('1Lx3L',e));if(J(e,"digits")){if(!le(e.digits))throw new TypeError(D('1Lx3P',"digits",e.digits));o=e.digits}if(J(e,"decision")){if(!ve(e.decision))throw new TypeError(D('1Lx2o',"decision",e.decision));i=e.decision}}switch(a="",a+=this.method,a+="\n\n",a+="Alternative hypothesis: ",this.method==="Paired Wilcoxon signed rank test"?a+="Median of the difference `x - y` is ":a+="Median of `x` is ",this.alternative){case"less":a+="less than ";break;case"greater":a+="greater than ";break;case"two-sided":default:a+="not equal to ";break}return a+=this.nullValue,a+="\n\n",a+=" pValue: "+K(this.pValue,-o)+"\n",a+=" statistic: "+K(this.statistic,-o)+"\n",a+="\n",i&&(a+="Test Decision: ",this.rejected?a+="Reject null in favor of alternative at "+this.alpha*100+"% significance level":a+="Fail to reject null in favor of alternative at "+this.alpha*100+"% significance level",a+="\n"),a}Q.exports=fe
|
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var Y=require('@stdlib/assert-is-number-array/dist').primitives,$=require('@stdlib/assert-is-typed-array-like/dist'),p=require('@stdlib/utils-define-read-only-property/dist'),ce=require('@stdlib/assert-is-plain-object/dist'),he=require('@stdlib/stats-ranks/dist'),de=require('@stdlib/stats-base-dists-normal-cdf/dist').factory,k=require('@stdlib/stats-base-dists-signrank-cdf/dist'),me=require('@stdlib/utils-tabulate/dist'),ge=require('@stdlib/math-base-special-signum/dist'),pe=require('@stdlib/math-base-special-sqrt/dist'),ee=require('@stdlib/math-base-special-abs/dist'),re=require('@stdlib/array-float64/dist'),L=require('@stdlib/error-tools-fmtprodmsg/dist'),we=H(),be=G(),qe=X(),S=de(0,1);function ye(){var e,i,o,a,u,O,T,l,P,z,m,v,f,w,A,t,F,c,R,q,M,y,n,r,g,x,b,s,h;if(s=arguments[0],!$(s)&&!Y(s))throw new TypeError(L('1Lx8R',s));if(t=s.length,arguments.length>1)if(ce(arguments[1]))o=arguments[1];else{if(h=arguments[1],!$(h)&&!Y(h))throw new TypeError(L('1LxA5',"y",h));if(t!==h.length)throw new Error(format('1Lx1E'));arguments.length>2&&(o=arguments[2])}if(v={},o&&(A=we(v,o),A))throw A;if(q=v.mu||0,v.correction===void 0?e=!0:e=v.correction,v.alpha===void 0?z=.05:z=v.alpha,t<2)throw new Error(L('1LxA2',s));if(w=v.alternative||"two-sided",i=v.zeroMethod||"wilcox",i==="wilcox"){if(n=[],h)for(r=0;r<t;r++)b=s[r]-h[r]-q,b!==0&&n.push(b);else for(r=0;r<t;r++)s[r]!==0&&n.push(s[r]-q);l=s.length-n.length}else if(n=new re(t),l=0,h)for(r=0;r<t;r++)n[r]=s[r]-h[r]-q,n[r]===0&&(l+=1);else for(r=0;r<t;r++)n[r]=s[r]-q,n[r]===0&&(l+=1);if(l===t)throw new Error(format('1Lx1J'));for(t=n.length,R=new re(t),r=0;r<t;r++)R[r]=ee(n[r]);for(g=he(R),T=0,P=0,r=0;r<t;r++)n[r]>0?T+=g[r]:n[r]===0&&(P+=g[r]);if(a=be(g).length!==g.length,i==="zsplit"&&(T+=P/2),x=T,M=t*(t+1)*.25,y=t*(t+1)*(2*t+1),i==="pratt"){for(F=[],r=0;r<t;r++)n[r]!==0&&F.push(g[r]);g=F,M-=l*(l+1)*.25,y-=l*(l+1)*(2*l+1)}for(u=me(g),O=0,r=0;r<u.length;r++)u[r][1]>1&&(b=u[r][1],O+=b*(b*b-1));if(O>0&&(y-=.5*O),y=pe(y/24),t>50&&!v.exact||l>0||a){if(n=0,e)switch(w){case"two-sided":n=.5*ge(x-M);break;case"less":n=-.5;break;default:n=.5;break}f=(x-M-n)/y,w==="two-sided"?m=2*(1-S(ee(f))):w==="greater"?m=1-S(f):m=S(f)}else f=x,w==="two-sided"?f>t*(t+1)/4?m=2*(1-k(f-1,t)):m=2*k(f,t):w==="greater"?m=1-k(f-1,t):m=k(f,t);return c={},p(c,"rejected",m<=z),p(c,"alpha",z),p(c,"pValue",m),p(c,"statistic",x),p(c,"nullValue",q),p(c,"alternative",w),p(c,"method",(h?"Paired":"One-Sample")+" Wilcoxon signed rank test"),p(c,"print",qe),c}ie.exports=ye
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"sourcesContent": ["/**\n* @license Apache-2.0\n*\n* Copyright (c) 2020 The Stdlib Authors.\n*\n* Licensed under the Apache License, Version 2.0 (the \"License\");\n* you may not use this file except in compliance with the License.\n* You may obtain a copy of the License at\n*\n* http://www.apache.org/licenses/LICENSE-2.0\n*\n* Unless required by applicable law or agreed to in writing, software\n* distributed under the License is distributed on an \"AS IS\" BASIS,\n* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.\n* See the License for the specific language governing permissions and\n* limitations under the License.\n*/\n\n'use strict';\n\n// MODULES //\n\nvar contains = require( '@stdlib/assert-contains' );\nvar isBoolean = require( '@stdlib/assert-is-boolean' ).isPrimitive;\nvar isNumber = require( '@stdlib/assert-is-number' ).isPrimitive;\nvar isObject = require( '@stdlib/assert-is-plain-object' );\nvar isString = require( '@stdlib/assert-is-string' ).isPrimitive;\nvar isnan = require( '@stdlib/assert-is-nan' );\nvar hasOwnProp = require( '@stdlib/assert-has-own-property' );\nvar format = require( '@stdlib/string-format' );\n\n\n// VARIABLES //\n\nvar ALTERNATIVE_VALUES = [ 'two-sided', 'less', 'greater' ];\nvar ZERO_METHOD_VALUES = [ 'pratt', 'wilcox', 'zsplit' ];\n\n\n// MAIN //\n\n/**\n* Validates function options.\n*\n* @private\n* @param {Object} opts - destination for validated options\n* @param {Options} options - function options\n* @param {number} [options.alpha] - significance level\n* @param {string} [options.alternative] - alternative hypothesis (`two-sided`, `less` or `greater`)\n* @param {boolean} [options.exact] - whether to force using the exact distribution instead of a normal approximation when there are more than fifty data points\n* @param {boolean} [options.correction] - continuity correction adjusting the Wilcoxon rank statistic by 0.5 towards the mean\n* @param {string} [options.zeroMethod] - method governing how zero-differences are handled (`pratt`, `wilcox` or `zsplit`)\n* @param {number} [options.mu] - mean under H0\n* @returns {(null|Error)} null or an error\n*/\nfunction validate( opts, options ) {\n\tif ( !isObject( options ) ) {\n\t\treturn new TypeError( format( 'invalid argument. Options argument must be an object. Value: `%s`.', options ) );\n\t}\n\tif ( hasOwnProp( options, 'alpha' ) ) {\n\t\topts.alpha = options.alpha;\n\t\tif ( !isNumber( opts.alpha ) || isnan( opts.alpha ) ) {\n\t\t\treturn new TypeError( format( 'invalid option. `%s` option must be a number. Option: `%s`.', 'alpha', opts.alpha ) );\n\t\t}\n\t\tif ( opts.alpha < 0.0 || opts.alpha > 1.0 ) {\n\t\t\treturn new RangeError( format( 'invalid option. `%s` option must be a number on the interval: [0, 1]. Option: `%f`.', 'alpha', opts.alpha ) );\n\t\t}\n\t}\n\tif ( hasOwnProp( options, 'alternative' ) ) {\n\t\topts.alternative = options.alternative;\n\t\tif ( !isString( opts.alternative ) ) {\n\t\t\treturn new TypeError( format( 'invalid option. `%s` option must be a string. Option: `%s`.', 'alternative', opts.alternative ) );\n\t\t}\n\t\tif ( !contains( ALTERNATIVE_VALUES, opts.alternative ) ) {\n\t\t\treturn new Error( format( 'invalid option. `%s` option must be one of the following: \"%s\". Option: `%s`.', 'alternative', ALTERNATIVE_VALUES.join( '\", \"' ), opts.alternative ) );\n\t\t}\n\t}\n\tif ( hasOwnProp( options, 'correction' ) ) {\n\t\topts.correction = options.correction;\n\t\tif ( !isBoolean( opts.correction ) || isnan( opts.correction ) ) {\n\t\t\treturn new TypeError( format( 'invalid option. `%s` option must be a boolean. Option: `%s`.', 'correction', opts.alpha ) );\n\t\t}\n\t}\n\tif ( hasOwnProp( options, 'exact' ) ) {\n\t\topts.exact = options.exact;\n\t\tif (\n\t\t\t!isBoolean( opts.exact ) ||\n\t\t\tisnan( opts.exact )\n\t\t) {\n\t\t\treturn new TypeError( format( 'invalid option. `%s` option must be a boolean. Option: `%s`.', 'exact', opts.alpha ) );\n\t\t}\n\t}\n\tif ( hasOwnProp( options, 'mu' ) ) {\n\t\topts.mu = options.mu;\n\t\tif ( !isNumber( opts.mu ) || isnan( opts.mu ) ) {\n\t\t\treturn new TypeError( format( 'invalid option. `%s` option must be a number. Option: `%s`.', 'mu', opts.mu ) );\n\t\t}\n\t}\n\tif ( hasOwnProp( options, 'zeroMethod' ) ) {\n\t\topts.zeroMethod = options.zeroMethod;\n\t\tif ( !isString( opts.zeroMethod ) ) {\n\t\t\treturn new TypeError( format( 'invalid option. `%s` option must be a string. Option: `%s`.', 'zeroMethod', opts.alternative ) );\n\t\t}\n\t\tif ( !contains( ZERO_METHOD_VALUES, opts.zeroMethod ) ) {\n\t\t\treturn new Error( format( 'invalid option. `%s` option must be one of the following: \"%s\". Option: `%s`.', 'zeroMethod', ZERO_METHOD_VALUES.join( '\", \"' ), opts.zeroMethod ) );\n\t\t}\n\t}\n\treturn null;\n}\n\n\n// EXPORTS //\n\nmodule.exports = validate;\n", "\n/**\n* @license Apache-2.0\n*\n* Copyright (c) 2020 The Stdlib Authors.\n*\n* Licensed under the Apache License, Version 2.0 (the \"License\");\n* you may not use this file except in compliance with the License.\n* You may obtain a copy of the License at\n*\n* http://www.apache.org/licenses/LICENSE-2.0\n*\n* Unless required by applicable law or agreed to in writing, software\n* distributed under the License is distributed on an \"AS IS\" BASIS,\n* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.\n* See the License for the specific language governing permissions and\n* limitations under the License.\n*/\n\n'use strict';\n\n// FUNCTIONS //\n\n/**\n* Comparator function to sort values in ascending order.\n*\n* @private\n* @param {number} a - first value\n* @param {number} b - second value\n* @returns {number} difference between `a` and `b`\n*/\nfunction ascending( a, b ) {\n\treturn a - b;\n}\n\n\n// MAIN //\n\n/**\n* Removes duplicate values from a numeric array.\n*\n* @private\n* @param {NumberArray} arr - array to be deduped\n* @returns {NumberArray} deduped array\n*/\nfunction unique( arr ) {\n\tvar len;\n\tvar val;\n\tvar i;\n\tvar j;\n\n\tarr = arr.slice();\n\tarr.sort( ascending );\n\tlen = arr.length;\n\n\t// Loop through the array, only incrementing a pointer when successive values are different. When a succeeding value is different, move the pointer and set the next value. In the trivial case where all array elements are unique, we incur a slight penalty in resetting the element value for each unique value. In other cases, we simply move a unique value to a new position in the array. The end result is a sorted array with unique values.\n\tfor ( i = 1, j = 0; i < len; i++ ) {\n\t\tval = arr[ i ];\n\t\tif ( arr[ j ] !== val ) {\n\t\t\tj += 1;\n\t\t\tarr[ j ] = val;\n\t\t}\n\t}\n\t// Truncate the array:\n\tarr.length = j + 1;\n\treturn arr;\n}\n\n\n// EXPORTS //\n\nmodule.exports = unique;\n", "/**\n* @license Apache-2.0\n*\n* Copyright (c) 2020 The Stdlib Authors.\n*\n* Licensed under the Apache License, Version 2.0 (the \"License\");\n* you may not use this file except in compliance with the License.\n* You may obtain a copy of the License at\n*\n* http://www.apache.org/licenses/LICENSE-2.0\n*\n* Unless required by applicable law or agreed to in writing, software\n* distributed under the License is distributed on an \"AS IS\" BASIS,\n* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.\n* See the License for the specific language governing permissions and\n* limitations under the License.\n*/\n\n'use strict';\n\n// MODULES //\n\nvar isPositiveInteger = require( '@stdlib/assert-is-positive-integer' );\nvar isObject = require( '@stdlib/assert-is-plain-object' );\nvar isBoolean = require( '@stdlib/assert-is-boolean' ).isPrimitive;\nvar hasOwnProp = require( '@stdlib/assert-has-own-property' );\nvar roundn = require( '@stdlib/math-base-special-roundn' );\nvar format = require( '@stdlib/string-format' );\n\n\n// MAIN //\n\n/**\n* Pretty-print output of test.\n*\n* @param {Object} [opts] - options object\n* @param {PositiveInteger} [opts.digits=4] - number of digits after the decimal point\n* @param {boolean} [opts.decision=true] - boolean indicating whether to print the test decision\n* @throws {TypeError} options argument must be an object\n* @throws {TypeError} must provide valid options\n* @returns {string} formatted output\n*/\nfunction print( opts ) { // eslint-disable-line stdlib/no-redeclare\n\t/* eslint-disable no-invalid-this */\n\tvar decision;\n\tvar dgts;\n\tvar str;\n\n\tdgts = 4;\n\tdecision = true;\n\tif ( arguments.length > 0 ) {\n\t\tif ( !isObject( opts ) ) {\n\t\t\tthrow new TypeError( format( 'invalid argument. First argument must be an object. Value: `%s`.', opts ) );\n\t\t}\n\t\tif ( hasOwnProp( opts, 'digits' ) ) {\n\t\t\tif ( !isPositiveInteger( opts.digits ) ) {\n\t\t\t\tthrow new TypeError( format( 'invalid option. `%s` option must be a positive integer. Option: `%s`.', 'digits', opts.digits ) );\n\t\t\t}\n\t\t\tdgts = opts.digits;\n\t\t}\n\t\tif ( hasOwnProp( opts, 'decision' ) ) {\n\t\t\tif ( !isBoolean( opts.decision ) ) {\n\t\t\t\tthrow new TypeError( format( 'invalid option. `%s` option must be a boolean. Option: `%s`.', 'decision', opts.decision ) );\n\t\t\t}\n\t\t\tdecision = opts.decision;\n\t\t}\n\t}\n\tstr = '';\n\tstr += this.method;\n\tstr += '\\n\\n';\n\tstr += 'Alternative hypothesis: ';\n\tif ( this.method === 'Paired Wilcoxon signed rank test' ) {\n\t\tstr += 'Median of the difference `x - y` is ';\n\t} else {\n\t\tstr += 'Median of `x` is ';\n\t}\n\tswitch ( this.alternative ) {\n\tcase 'less':\n\t\tstr += 'less than ';\n\t\tbreak;\n\tcase 'greater':\n\t\tstr += 'greater than ';\n\t\tbreak;\n\tcase 'two-sided':\n\tdefault:\n\t\tstr += 'not equal to ';\n\t\tbreak;\n\t}\n\tstr += this.nullValue;\n\tstr += '\\n\\n';\n\tstr += ' pValue: ' + roundn( this.pValue, -dgts ) + '\\n';\n\tstr += ' statistic: ' + roundn( this.statistic, -dgts ) + '\\n';\n\tstr += '\\n';\n\tif ( decision ) {\n\t\tstr += 'Test Decision: ';\n\t\tif ( this.rejected ) {\n\t\t\tstr += 'Reject null in favor of alternative at ' + (this.alpha*100) + '% significance level';\n\t\t} else {\n\t\t\tstr += 'Fail to reject null in favor of alternative at ' + (this.alpha*100) + '% significance level';\n\t\t}\n\t\tstr += '\\n';\n\t}\n\treturn str;\n}\n\n\n// EXPORTS //\n\nmodule.exports = print;\n", "/* eslint-disable max-statements, max-lines-per-function */\n\n/**\n* @license Apache-2.0\n*\n* Copyright (c) 2020 The Stdlib Authors.\n*\n* Licensed under the Apache License, Version 2.0 (the \"License\");\n* you may not use this file except in compliance with the License.\n* You may obtain a copy of the License at\n*\n* http://www.apache.org/licenses/LICENSE-2.0\n*\n* Unless required by applicable law or agreed to in writing, software\n* distributed under the License is distributed on an \"AS IS\" BASIS,\n* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.\n* See the License for the specific language governing permissions and\n* limitations under the License.\n*/\n\n'use strict';\n\n// MODULES //\n\nvar isNumberArray = require( '@stdlib/assert-is-number-array' ).primitives;\nvar isTypedArrayLike = require( '@stdlib/assert-is-typed-array-like' );\nvar setReadOnly = require( '@stdlib/utils-define-read-only-property' );\nvar isObject = require( '@stdlib/assert-is-plain-object' );\nvar ranks = require( '@stdlib/stats-ranks' );\nvar normalCDF = require( '@stdlib/stats-base-dists-normal-cdf' ).factory;\nvar signrankCDF = require( '@stdlib/stats-base-dists-signrank-cdf' );\nvar tabulate = require( '@stdlib/utils-tabulate' );\nvar signum = require( '@stdlib/math-base-special-signum' );\nvar sqrt = require( '@stdlib/math-base-special-sqrt' );\nvar abs = require( '@stdlib/math-base-special-abs' );\nvar Float64Array = require( '@stdlib/array-float64' );\nvar format = require( '@stdlib/string-format' );\nvar validate = require( './validate.js' );\nvar unique = require( './unique.js' );\nvar print = require( './print.js' ); // eslint-disable-line stdlib/no-redeclare\n\n\n// VARIABLES //\n\nvar pnorm = normalCDF( 0.0, 1.0 );\n\n\n// MAIN //\n\n/**\n* Computes a Wilcoxon signed rank test.\n*\n* @param {NumericArray} x - data array\n* @param {NumericArray} [y] - optional paired data array\n* @param {Options} [options] - function options\n* @param {number} [options.alpha=0.05] - significance level\n* @param {string} [options.alternative='two-sided'] - alternative hypothesis (`two-sided`, `less`, or `greater`)\n* @param {string} [options.zeroMethod='wilcox'] - method governing how zero-differences are handled (`pratt`, `wilcox`, or `zsplit`)\n* @param {boolean} [options.correction=true] - continuity correction adjusting the Wilcoxon rank statistic by 0.5 towards the mean\n* @param {boolean} [options.exact=false] - whether to force using the exact distribution instead of a normal approximation when there are more than fifty data points\n* @param {number} [options.mu=0] - location parameter under H0\n* @throws {TypeError} `x` must be a numeric array\n* @throws {TypeError} `y` must be a numeric array\n* @throws {TypeError} options must be an object\n* @throws {TypeError} `alpha` option has to be a number\n* @throws {RangeError} `alpha` option has to be a number in the interval `[0,1]`\n* @throws {TypeError} `alternative` option has to be a string\n* @throws {Error} `alternative` option must be `two-sided`, `less`, or `greater`\n* @throws {TypeError} `zeroMethod` option has to be a string\n* @throws {Error} `zeroMethod` option must be `pratt`, `wilcox`, or `zsplit`\n* @throws {TypeError} `correction` option has to be a boolean\n* @throws {TypeError} `exact` option has to be a boolean\n* @throws {TypeError} `mu` option has to be a number\n* @returns {Object} test result object\n*\n* @example\n* var x = [ 6, 8, 14, 16, 23, 24, 28, 29, 41, -48, 49, 56, 60, -67, 75 ];\n* var out = wilcoxon( x, {\n* 'mu': 2\n* });\n*\n* @example\n* var x = [ 6, 8, 14, 16, 23, 24, 28, 29, 41, -48, 49, 56, 60, -67, 75 ];\n* var out = wilcoxon( x, {\n* 'alternative': 'greater'\n* });\n*/\nfunction wilcoxon() {\n\tvar correction;\n\tvar zeroMethod;\n\tvar options;\n\tvar hasTies;\n\tvar counts;\n\tvar repsum;\n\tvar rplus;\n\tvar nzero;\n\tvar rzero;\n\tvar alpha;\n\tvar pval;\n\tvar opts;\n\tvar stat;\n\tvar alt;\n\tvar err;\n\tvar len;\n\tvar tmp;\n\tvar out;\n\tvar ad;\n\tvar mu;\n\tvar mn;\n\tvar se;\n\tvar d;\n\tvar i;\n\tvar r;\n\tvar T;\n\tvar v;\n\tvar x;\n\tvar y;\n\n\tx = arguments[ 0 ];\n\tif ( !isTypedArrayLike( x ) && !isNumberArray( x ) ) {\n\t\tthrow new TypeError( format( 'invalid argument. First argument must be a numeric array. Value: `%s`.', x ) );\n\t}\n\tlen = x.length;\n\tif ( arguments.length > 1 ) {\n\t\tif ( isObject( arguments[ 1 ] ) ) {\n\t\t\toptions = arguments[ 1 ];\n\t\t} else {\n\t\t\ty = arguments[ 1 ];\n\t\t\tif ( !isTypedArrayLike( y ) && !isNumberArray( y ) ) {\n\t\t\t\tthrow new TypeError( format( 'invalid argument. `%s` argument must be a numeric array. Value: `%s`.', 'y', y ) );\n\t\t\t}\n\t\t\tif ( len !== y.length ) {\n\t\t\t\tthrow new Error( 'invalid arguments. First and second arguments must have the same length.' );\n\t\t\t}\n\t\t\tif ( arguments.length > 2 ) {\n\t\t\t\toptions = arguments[ 2 ];\n\t\t\t}\n\t\t}\n\t}\n\topts = {};\n\tif ( options ) {\n\t\terr = validate( opts, options );\n\t\tif ( err ) {\n\t\t\tthrow err;\n\t\t}\n\t}\n\tmu = opts.mu || 0.0;\n\tif ( opts.correction === void 0 ) {\n\t\tcorrection = true;\n\t} else {\n\t\tcorrection = opts.correction;\n\t}\n\tif ( opts.alpha === void 0 ) {\n\t\talpha = 0.05;\n\t} else {\n\t\talpha = opts.alpha;\n\t}\n\tif ( len < 2 ) {\n\t\tthrow new Error( format( 'invalid argument. First argument must contain at least two elements. Value: `%s`.', x ) );\n\t}\n\talt = opts.alternative || 'two-sided';\n\tzeroMethod = opts.zeroMethod || 'wilcox';\n\n\tif ( zeroMethod === 'wilcox' ) {\n\t\t// Only keep all non-zero differences:\n\t\td = [];\n\t\tif ( y ) {\n\t\t\tfor ( i = 0; i < len; i++ ) {\n\t\t\t\tv = ( x[ i ] - y[ i ] ) - mu;\n\t\t\t\tif ( v !== 0 ) {\n\t\t\t\t\td.push( v );\n\t\t\t\t}\n\t\t\t}\n\t\t} else {\n\t\t\tfor ( i = 0; i < len; i++ ) {\n\t\t\t\tif ( x[ i ] !== 0 ) {\n\t\t\t\t\td.push( x[ i ] - mu );\n\t\t\t\t}\n\t\t\t}\n\t\t}\n\t\tnzero = x.length - d.length;\n\t} else {\n\t\td = new Float64Array( len );\n\t\tnzero = 0;\n\t\tif ( y ) {\n\t\t\tfor ( i = 0; i < len; i++ ) {\n\t\t\t\td[ i ] = ( x[ i ] - y[ i ] ) - mu;\n\t\t\t\tif ( d[ i ] === 0 ) {\n\t\t\t\t\tnzero += 1;\n\t\t\t\t}\n\t\t\t}\n\t\t} else {\n\t\t\tfor ( i = 0; i < len; i++ ) {\n\t\t\t\td[ i ] = x[ i ] - mu;\n\t\t\t\tif ( d[ i ] === 0 ) {\n\t\t\t\t\tnzero += 1;\n\t\t\t\t}\n\t\t\t}\n\t\t}\n\t}\n\tif ( nzero === len ) {\n\t\tthrow new Error( '`x` or `x - y` cannot be zero for all elements.' );\n\t}\n\t// Update length after potentially discarding zero values:\n\tlen = d.length;\n\tad = new Float64Array( len );\n\tfor ( i = 0; i < len; i++ ) {\n\t\tad[ i ] = abs( d[ i ] );\n\t}\n\tr = ranks( ad );\n\trplus = 0;\n\trzero = 0;\n\tfor ( i = 0; i < len; i++ ) {\n\t\tif ( d[ i ] > 0 ) {\n\t\t\trplus += r[ i ];\n\t\t}\n\t\telse if ( d[ i ] === 0 ) {\n\t\t\trzero += r[ i ];\n\t\t}\n\t}\n\thasTies = unique( r ).length !== r.length;\n\tif ( zeroMethod === 'zsplit' ) {\n\t\trplus += rzero / 2.0;\n\t}\n\tT = rplus;\n\tmn = len * ( len + 1.0 ) * 0.25;\n\tse = len * ( len + 1.0 ) * ( ( 2.0 * len ) + 1.0 );\n\n\tif ( zeroMethod === 'pratt' ) {\n\t\ttmp = [];\n\t\tfor ( i = 0; i < len; i++ ) {\n\t\t\tif ( d[ i ] !== 0 ) {\n\t\t\t\ttmp.push( r[ i ] );\n\t\t\t}\n\t\t}\n\t\tr = tmp;\n\t\tmn -= nzero * ( nzero + 1.0 ) * 0.25;\n\t\tse -= nzero * ( nzero + 1.0 ) * ( ( 2.0 * nzero ) + 1.0 );\n\t}\n\tcounts = tabulate( r );\n\trepsum = 0;\n\tfor ( i = 0; i < counts.length; i++ ) {\n\t\tif ( counts[ i ][ 1 ] > 1 ) {\n\t\t\tv = counts[ i ][ 1 ];\n\t\t\trepsum += v * ( (v*v) - 1 );\n\t\t}\n\t}\n\tif ( repsum > 0 ) {\n\t\t// Correction for repeated values:\n\t\tse -= 0.5 * repsum;\n\t}\n\tse = sqrt( se / 24.0 );\n\n\tif (\n\t\t( len > 50 && !opts.exact ) ||\n\t\tnzero > 0 ||\n\t\thasTies\n\t) {\n\t\td = 0.0;\n\t\tif ( correction ) {\n\t\t\tswitch ( alt ) {\n\t\t\tcase 'two-sided':\n\t\t\t\td = 0.5 * signum( T - mn );\n\t\t\t\tbreak;\n\t\t\tcase 'less':\n\t\t\t\td = -0.5;\n\t\t\t\tbreak;\n\t\t\tdefault:\n\t\t\t\td = 0.5;\n\t\t\t\tbreak;\n\t\t\t}\n\t\t}\n\t\t// Compute test statistic and p-value using normal approximation:\n\t\tstat = ( T - mn - d ) / se;\n\t\tif ( alt === 'two-sided' ) {\n\t\t\tpval = 2.0 * ( 1.0 - pnorm( abs( stat ) ) );\n\t\t} else if ( alt === 'greater' ) {\n\t\t\tpval = 1.0 - pnorm( stat );\n\t\t} else {\n\t\t\tpval = pnorm( stat );\n\t\t}\n\t} else {\n\t\t// Compute test statistic and p-value using exact critical values:\n\t\tstat = T;\n\t\tif ( alt === 'two-sided' ) {\n\t\t\tif ( stat > ( len * ( len+1 ) / 4 ) ) {\n\t\t\t\tpval = 2.0 * ( 1 - signrankCDF( stat - 1, len ) );\n\t\t\t} else {\n\t\t\t\tpval = 2.0 * signrankCDF( stat, len );\n\t\t\t}\n\t\t} else if ( alt === 'greater' ) {\n\t\t\tpval = 1.0 - signrankCDF( stat - 1, len );\n\t\t} else {\n\t\t\tpval = signrankCDF( stat, len );\n\t\t}\n\t}\n\tout = {};\n\tsetReadOnly( out, 'rejected', pval <= alpha );\n\tsetReadOnly( out, 'alpha', alpha );\n\tsetReadOnly( out, 'pValue', pval );\n\tsetReadOnly( out, 'statistic', T );\n\tsetReadOnly( out, 'nullValue', mu );\n\tsetReadOnly( out, 'alternative', alt );\n\tsetReadOnly( out, 'method', ( ( y ) ? 'Paired' : 'One-Sample' ) + ' Wilcoxon signed rank test' );\n\tsetReadOnly( out, 'print', print );\n\treturn out;\n}\n\n\n// EXPORTS //\n\nmodule.exports = wilcoxon;\n", "/**\n* @license Apache-2.0\n*\n* Copyright (c) 2020 The Stdlib Authors.\n*\n* Licensed under the Apache License, Version 2.0 (the \"License\");\n* you may not use this file except in compliance with the License.\n* You may obtain a copy of the License at\n*\n* http://www.apache.org/licenses/LICENSE-2.0\n*\n* Unless required by applicable law or agreed to in writing, software\n* distributed under the License is distributed on an \"AS IS\" BASIS,\n* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.\n* See the License for the specific language governing permissions and\n* limitations under the License.\n*/\n\n'use strict';\n\n/**\n* Compute a Wilcoxon signed-rank test.\n*\n* @module @stdlib/stats-wilcoxon\n*\n* @example\n* var normal = require( '@stdlib/random-base-normal' ).factory;\n* var wilcoxon = require( '@stdlib/stats-wilcoxon' );\n*\n* var rnorm;\n* var out;\n* var i;\n* var x;\n* var y;\n*\n* rnorm = normal( 1.0, 2.0, {\n* 'seed': 786\n* });\n*\n* // One-sample Wilcoxon signed rank test:\n* x = new Array( 100 );\n* for ( i = 0; i < x.length; i++ ) {\n* x[ i ] = rnorm();\n* }\n* out = wilcoxon( x );\n*\n* // Paired Wilcoxon signed rank test:\n* x = new Array( 100 );\n* y = new Array( 100 );\n* for ( i = 0; i < x.length; i++ ) {\n* x[ i ] = rnorm();\n* y[ i ] = rnorm();\n* }\n* out = wilcoxon( x, y );\n*/\n\n// MODULES //\n\nvar main = require( './main.js' );\n\n\n// EXPORTS //\n\nmodule.exports = main;\n"],
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5
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+
"mappings": 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|
|
6
|
+
"names": ["require_validate", "__commonJSMin", "exports", "module", "contains", "isBoolean", "isNumber", "isObject", "isString", "isnan", "hasOwnProp", "format", "ALTERNATIVE_VALUES", "ZERO_METHOD_VALUES", "validate", "opts", "options", "require_unique", "__commonJSMin", "exports", "module", "ascending", "a", "b", "unique", "arr", "len", "val", "i", "j", "require_print", "__commonJSMin", "exports", "module", "isPositiveInteger", "isObject", "isBoolean", "hasOwnProp", "roundn", "format", "print", "opts", "decision", "dgts", "str", "require_main", "__commonJSMin", "exports", "module", "isNumberArray", "isTypedArrayLike", "setReadOnly", "isObject", "ranks", "normalCDF", "signrankCDF", "tabulate", "signum", "sqrt", "abs", "Float64Array", "format", "validate", "unique", "print", "pnorm", "wilcoxon", "correction", "zeroMethod", "options", "hasTies", "counts", "repsum", "rplus", "nzero", "rzero", "alpha", "pval", "opts", "stat", "alt", "err", "len", "tmp", "out", "ad", "mu", "mn", "se", "d", "i", "r", "T", "v", "x", "y", "main"]
|
|
7
|
+
}
|
package/docs/types/index.d.ts
CHANGED
package/lib/index.js
CHANGED
package/lib/main.js
CHANGED
|
@@ -34,6 +34,7 @@ var signum = require( '@stdlib/math-base-special-signum' );
|
|
|
34
34
|
var sqrt = require( '@stdlib/math-base-special-sqrt' );
|
|
35
35
|
var abs = require( '@stdlib/math-base-special-abs' );
|
|
36
36
|
var Float64Array = require( '@stdlib/array-float64' );
|
|
37
|
+
var format = require( '@stdlib/string-format' );
|
|
37
38
|
var validate = require( './validate.js' );
|
|
38
39
|
var unique = require( './unique.js' );
|
|
39
40
|
var print = require( './print.js' ); // eslint-disable-line stdlib/no-redeclare
|
|
@@ -60,16 +61,16 @@ var pnorm = normalCDF( 0.0, 1.0 );
|
|
|
60
61
|
* @param {number} [options.mu=0] - location parameter under H0
|
|
61
62
|
* @throws {TypeError} `x` must be a numeric array
|
|
62
63
|
* @throws {TypeError} `y` must be a numeric array
|
|
63
|
-
* @throws {TypeError} options
|
|
64
|
-
* @throws {TypeError} `alpha` option has to be a number
|
|
64
|
+
* @throws {TypeError} options must be an object
|
|
65
|
+
* @throws {TypeError} `alpha` option has to be a number
|
|
65
66
|
* @throws {RangeError} `alpha` option has to be a number in the interval `[0,1]`
|
|
66
|
-
* @throws {TypeError} `alternative` option has to be a string
|
|
67
|
+
* @throws {TypeError} `alternative` option has to be a string
|
|
67
68
|
* @throws {Error} `alternative` option must be `two-sided`, `less`, or `greater`
|
|
68
|
-
* @throws {TypeError} `zeroMethod` option has to be a string
|
|
69
|
+
* @throws {TypeError} `zeroMethod` option has to be a string
|
|
69
70
|
* @throws {Error} `zeroMethod` option must be `pratt`, `wilcox`, or `zsplit`
|
|
70
|
-
* @throws {TypeError} `correction` option has to be a boolean
|
|
71
|
-
* @throws {TypeError} `exact` option has to be a boolean
|
|
72
|
-
* @throws {TypeError} `mu` option has to be a number
|
|
71
|
+
* @throws {TypeError} `correction` option has to be a boolean
|
|
72
|
+
* @throws {TypeError} `exact` option has to be a boolean
|
|
73
|
+
* @throws {TypeError} `mu` option has to be a number
|
|
73
74
|
* @returns {Object} test result object
|
|
74
75
|
*
|
|
75
76
|
* @example
|
|
@@ -117,7 +118,7 @@ function wilcoxon() {
|
|
|
117
118
|
|
|
118
119
|
x = arguments[ 0 ];
|
|
119
120
|
if ( !isTypedArrayLike( x ) && !isNumberArray( x ) ) {
|
|
120
|
-
throw new TypeError( 'invalid argument. First argument must be a numeric array. Value:
|
|
121
|
+
throw new TypeError( format( 'invalid argument. First argument must be a numeric array. Value: `%s`.', x ) );
|
|
121
122
|
}
|
|
122
123
|
len = x.length;
|
|
123
124
|
if ( arguments.length > 1 ) {
|
|
@@ -126,10 +127,10 @@ function wilcoxon() {
|
|
|
126
127
|
} else {
|
|
127
128
|
y = arguments[ 1 ];
|
|
128
129
|
if ( !isTypedArrayLike( y ) && !isNumberArray( y ) ) {
|
|
129
|
-
throw new TypeError( 'invalid argument. `
|
|
130
|
+
throw new TypeError( format( 'invalid argument. `%s` argument must be a numeric array. Value: `%s`.', 'y', y ) );
|
|
130
131
|
}
|
|
131
132
|
if ( len !== y.length ) {
|
|
132
|
-
throw new Error( 'invalid arguments.
|
|
133
|
+
throw new Error( 'invalid arguments. First and second arguments must have the same length.' );
|
|
133
134
|
}
|
|
134
135
|
if ( arguments.length > 2 ) {
|
|
135
136
|
options = arguments[ 2 ];
|
|
@@ -155,7 +156,7 @@ function wilcoxon() {
|
|
|
155
156
|
alpha = opts.alpha;
|
|
156
157
|
}
|
|
157
158
|
if ( len < 2 ) {
|
|
158
|
-
throw new Error( 'invalid argument. First argument must contain at least two elements. Value:
|
|
159
|
+
throw new Error( format( 'invalid argument. First argument must contain at least two elements. Value: `%s`.', x ) );
|
|
159
160
|
}
|
|
160
161
|
alt = opts.alternative || 'two-sided';
|
|
161
162
|
zeroMethod = opts.zeroMethod || 'wilcox';
|
package/lib/print.js
CHANGED
|
@@ -25,6 +25,7 @@ var isObject = require( '@stdlib/assert-is-plain-object' );
|
|
|
25
25
|
var isBoolean = require( '@stdlib/assert-is-boolean' ).isPrimitive;
|
|
26
26
|
var hasOwnProp = require( '@stdlib/assert-has-own-property' );
|
|
27
27
|
var roundn = require( '@stdlib/math-base-special-roundn' );
|
|
28
|
+
var format = require( '@stdlib/string-format' );
|
|
28
29
|
|
|
29
30
|
|
|
30
31
|
// MAIN //
|
|
@@ -49,17 +50,17 @@ function print( opts ) { // eslint-disable-line stdlib/no-redeclare
|
|
|
49
50
|
decision = true;
|
|
50
51
|
if ( arguments.length > 0 ) {
|
|
51
52
|
if ( !isObject( opts ) ) {
|
|
52
|
-
throw new TypeError( 'invalid argument. First argument must be an
|
|
53
|
+
throw new TypeError( format( 'invalid argument. First argument must be an object. Value: `%s`.', opts ) );
|
|
53
54
|
}
|
|
54
55
|
if ( hasOwnProp( opts, 'digits' ) ) {
|
|
55
56
|
if ( !isPositiveInteger( opts.digits ) ) {
|
|
56
|
-
throw new TypeError( 'invalid option. `
|
|
57
|
+
throw new TypeError( format( 'invalid option. `%s` option must be a positive integer. Option: `%s`.', 'digits', opts.digits ) );
|
|
57
58
|
}
|
|
58
59
|
dgts = opts.digits;
|
|
59
60
|
}
|
|
60
61
|
if ( hasOwnProp( opts, 'decision' ) ) {
|
|
61
62
|
if ( !isBoolean( opts.decision ) ) {
|
|
62
|
-
throw new TypeError( 'invalid option. `
|
|
63
|
+
throw new TypeError( format( 'invalid option. `%s` option must be a boolean. Option: `%s`.', 'decision', opts.decision ) );
|
|
63
64
|
}
|
|
64
65
|
decision = opts.decision;
|
|
65
66
|
}
|
|
@@ -74,16 +75,16 @@ function print( opts ) { // eslint-disable-line stdlib/no-redeclare
|
|
|
74
75
|
str += 'Median of `x` is ';
|
|
75
76
|
}
|
|
76
77
|
switch ( this.alternative ) {
|
|
77
|
-
case 'two-sided':
|
|
78
|
-
default:
|
|
79
|
-
str += 'not equal to ';
|
|
80
|
-
break;
|
|
81
78
|
case 'less':
|
|
82
79
|
str += 'less than ';
|
|
83
80
|
break;
|
|
84
81
|
case 'greater':
|
|
85
82
|
str += 'greater than ';
|
|
86
83
|
break;
|
|
84
|
+
case 'two-sided':
|
|
85
|
+
default:
|
|
86
|
+
str += 'not equal to ';
|
|
87
|
+
break;
|
|
87
88
|
}
|
|
88
89
|
str += this.nullValue;
|
|
89
90
|
str += '\n\n';
|
package/lib/validate.js
CHANGED
|
@@ -27,6 +27,7 @@ var isObject = require( '@stdlib/assert-is-plain-object' );
|
|
|
27
27
|
var isString = require( '@stdlib/assert-is-string' ).isPrimitive;
|
|
28
28
|
var isnan = require( '@stdlib/assert-is-nan' );
|
|
29
29
|
var hasOwnProp = require( '@stdlib/assert-has-own-property' );
|
|
30
|
+
var format = require( '@stdlib/string-format' );
|
|
30
31
|
|
|
31
32
|
|
|
32
33
|
// VARIABLES //
|
|
@@ -53,30 +54,30 @@ var ZERO_METHOD_VALUES = [ 'pratt', 'wilcox', 'zsplit' ];
|
|
|
53
54
|
*/
|
|
54
55
|
function validate( opts, options ) {
|
|
55
56
|
if ( !isObject( options ) ) {
|
|
56
|
-
return new TypeError( 'invalid argument. Options argument must be an object. Value:
|
|
57
|
+
return new TypeError( format( 'invalid argument. Options argument must be an object. Value: `%s`.', options ) );
|
|
57
58
|
}
|
|
58
59
|
if ( hasOwnProp( options, 'alpha' ) ) {
|
|
59
60
|
opts.alpha = options.alpha;
|
|
60
61
|
if ( !isNumber( opts.alpha ) || isnan( opts.alpha ) ) {
|
|
61
|
-
return new TypeError( 'invalid option. `
|
|
62
|
+
return new TypeError( format( 'invalid option. `%s` option must be a number. Option: `%s`.', 'alpha', opts.alpha ) );
|
|
62
63
|
}
|
|
63
64
|
if ( opts.alpha < 0.0 || opts.alpha > 1.0 ) {
|
|
64
|
-
return new RangeError( 'invalid
|
|
65
|
+
return new RangeError( format( 'invalid option. `%s` option must be a number on the interval: [0, 1]. Option: `%f`.', 'alpha', opts.alpha ) );
|
|
65
66
|
}
|
|
66
67
|
}
|
|
67
68
|
if ( hasOwnProp( options, 'alternative' ) ) {
|
|
68
69
|
opts.alternative = options.alternative;
|
|
69
70
|
if ( !isString( opts.alternative ) ) {
|
|
70
|
-
return new TypeError( 'invalid option. `
|
|
71
|
+
return new TypeError( format( 'invalid option. `%s` option must be a string. Option: `%s`.', 'alternative', opts.alternative ) );
|
|
71
72
|
}
|
|
72
73
|
if ( !contains( ALTERNATIVE_VALUES, opts.alternative ) ) {
|
|
73
|
-
return new Error( 'invalid option. `
|
|
74
|
+
return new Error( format( 'invalid option. `%s` option must be one of the following: "%s". Option: `%s`.', 'alternative', ALTERNATIVE_VALUES.join( '", "' ), opts.alternative ) );
|
|
74
75
|
}
|
|
75
76
|
}
|
|
76
77
|
if ( hasOwnProp( options, 'correction' ) ) {
|
|
77
78
|
opts.correction = options.correction;
|
|
78
79
|
if ( !isBoolean( opts.correction ) || isnan( opts.correction ) ) {
|
|
79
|
-
return new TypeError( 'invalid option. `
|
|
80
|
+
return new TypeError( format( 'invalid option. `%s` option must be a boolean. Option: `%s`.', 'correction', opts.alpha ) );
|
|
80
81
|
}
|
|
81
82
|
}
|
|
82
83
|
if ( hasOwnProp( options, 'exact' ) ) {
|
|
@@ -85,22 +86,22 @@ function validate( opts, options ) {
|
|
|
85
86
|
!isBoolean( opts.exact ) ||
|
|
86
87
|
isnan( opts.exact )
|
|
87
88
|
) {
|
|
88
|
-
return new TypeError( 'invalid option. `
|
|
89
|
+
return new TypeError( format( 'invalid option. `%s` option must be a boolean. Option: `%s`.', 'exact', opts.alpha ) );
|
|
89
90
|
}
|
|
90
91
|
}
|
|
91
92
|
if ( hasOwnProp( options, 'mu' ) ) {
|
|
92
93
|
opts.mu = options.mu;
|
|
93
94
|
if ( !isNumber( opts.mu ) || isnan( opts.mu ) ) {
|
|
94
|
-
return new TypeError( 'invalid option. `
|
|
95
|
+
return new TypeError( format( 'invalid option. `%s` option must be a number. Option: `%s`.', 'mu', opts.mu ) );
|
|
95
96
|
}
|
|
96
97
|
}
|
|
97
98
|
if ( hasOwnProp( options, 'zeroMethod' ) ) {
|
|
98
99
|
opts.zeroMethod = options.zeroMethod;
|
|
99
100
|
if ( !isString( opts.zeroMethod ) ) {
|
|
100
|
-
return new TypeError( 'invalid option. `
|
|
101
|
+
return new TypeError( format( 'invalid option. `%s` option must be a string. Option: `%s`.', 'zeroMethod', opts.alternative ) );
|
|
101
102
|
}
|
|
102
103
|
if ( !contains( ZERO_METHOD_VALUES, opts.zeroMethod ) ) {
|
|
103
|
-
return new Error( 'invalid option. `
|
|
104
|
+
return new Error( format( 'invalid option. `%s` option must be one of the following: "%s". Option: `%s`.', 'zeroMethod', ZERO_METHOD_VALUES.join( '", "' ), opts.zeroMethod ) );
|
|
104
105
|
}
|
|
105
106
|
}
|
|
106
107
|
return null;
|
package/package.json
CHANGED
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
{
|
|
2
2
|
"name": "@stdlib/stats-wilcoxon",
|
|
3
|
-
"version": "0.0
|
|
3
|
+
"version": "0.1.0",
|
|
4
4
|
"description": "Wilcoxon signed rank test.",
|
|
5
5
|
"license": "Apache-2.0",
|
|
6
6
|
"author": {
|
|
@@ -37,37 +37,39 @@
|
|
|
37
37
|
"url": "https://github.com/stdlib-js/stdlib/issues"
|
|
38
38
|
},
|
|
39
39
|
"dependencies": {
|
|
40
|
-
"@stdlib/array-float64": "^0.0
|
|
41
|
-
"@stdlib/assert-contains": "^0.0
|
|
42
|
-
"@stdlib/assert-has-own-property": "^0.0
|
|
43
|
-
"@stdlib/assert-is-boolean": "^0.0
|
|
44
|
-
"@stdlib/assert-is-nan": "^0.0
|
|
45
|
-
"@stdlib/assert-is-number": "^0.0
|
|
46
|
-
"@stdlib/assert-is-number-array": "^0.0
|
|
47
|
-
"@stdlib/assert-is-plain-object": "^0.0
|
|
48
|
-
"@stdlib/assert-is-positive-integer": "^0.0
|
|
49
|
-
"@stdlib/assert-is-string": "^0.0
|
|
50
|
-
"@stdlib/assert-is-typed-array-like": "^0.0
|
|
51
|
-
"@stdlib/math-base-special-abs": "^0.0
|
|
52
|
-
"@stdlib/math-base-special-roundn": "^0.0
|
|
53
|
-
"@stdlib/math-base-special-signum": "^0.0
|
|
54
|
-
"@stdlib/math-base-special-sqrt": "^0.0
|
|
55
|
-
"@stdlib/stats-base-dists-normal-cdf": "^0.0
|
|
56
|
-
"@stdlib/stats-base-dists-signrank-cdf": "^0.0
|
|
57
|
-
"@stdlib/stats-ranks": "^0.0
|
|
58
|
-
"@stdlib/
|
|
59
|
-
"@stdlib/
|
|
60
|
-
"@stdlib/utils-
|
|
40
|
+
"@stdlib/array-float64": "^0.1.0",
|
|
41
|
+
"@stdlib/assert-contains": "^0.1.0",
|
|
42
|
+
"@stdlib/assert-has-own-property": "^0.1.0",
|
|
43
|
+
"@stdlib/assert-is-boolean": "^0.1.0",
|
|
44
|
+
"@stdlib/assert-is-nan": "^0.1.0",
|
|
45
|
+
"@stdlib/assert-is-number": "^0.1.0",
|
|
46
|
+
"@stdlib/assert-is-number-array": "^0.1.0",
|
|
47
|
+
"@stdlib/assert-is-plain-object": "^0.1.0",
|
|
48
|
+
"@stdlib/assert-is-positive-integer": "^0.1.0",
|
|
49
|
+
"@stdlib/assert-is-string": "^0.1.0",
|
|
50
|
+
"@stdlib/assert-is-typed-array-like": "^0.1.0",
|
|
51
|
+
"@stdlib/math-base-special-abs": "^0.1.0",
|
|
52
|
+
"@stdlib/math-base-special-roundn": "^0.1.0",
|
|
53
|
+
"@stdlib/math-base-special-signum": "^0.1.0",
|
|
54
|
+
"@stdlib/math-base-special-sqrt": "^0.1.0",
|
|
55
|
+
"@stdlib/stats-base-dists-normal-cdf": "^0.1.0",
|
|
56
|
+
"@stdlib/stats-base-dists-signrank-cdf": "^0.1.0",
|
|
57
|
+
"@stdlib/stats-ranks": "^0.1.0",
|
|
58
|
+
"@stdlib/string-format": "^0.1.0",
|
|
59
|
+
"@stdlib/types": "^0.1.0",
|
|
60
|
+
"@stdlib/utils-define-read-only-property": "^0.1.0",
|
|
61
|
+
"@stdlib/utils-tabulate": "^0.1.0",
|
|
62
|
+
"@stdlib/error-tools-fmtprodmsg": "^0.1.0"
|
|
61
63
|
},
|
|
62
64
|
"devDependencies": {
|
|
63
|
-
"@stdlib/assert-is-object": "^0.0
|
|
64
|
-
"@stdlib/bench": "^0.0
|
|
65
|
-
"@stdlib/constants-float64-eps": "^0.0
|
|
66
|
-
"@stdlib/random-base-discrete-uniform": "^0.0.
|
|
67
|
-
"@stdlib/random-base-randu": "^0.0.
|
|
65
|
+
"@stdlib/assert-is-object": "^0.1.0",
|
|
66
|
+
"@stdlib/bench": "^0.1.0",
|
|
67
|
+
"@stdlib/constants-float64-eps": "^0.1.0",
|
|
68
|
+
"@stdlib/random-base-discrete-uniform": "^0.0.6",
|
|
69
|
+
"@stdlib/random-base-randu": "^0.0.8",
|
|
68
70
|
"tape": "git+https://github.com/kgryte/tape.git#fix/globby",
|
|
69
71
|
"istanbul": "^0.4.1",
|
|
70
|
-
"tap-
|
|
72
|
+
"tap-min": "git+https://github.com/Planeshifter/tap-min.git"
|
|
71
73
|
},
|
|
72
74
|
"engines": {
|
|
73
75
|
"node": ">=0.10.0",
|
|
@@ -103,7 +105,7 @@
|
|
|
103
105
|
"hypothesis"
|
|
104
106
|
],
|
|
105
107
|
"funding": {
|
|
106
|
-
"type": "
|
|
107
|
-
"url": "https://
|
|
108
|
+
"type": "opencollective",
|
|
109
|
+
"url": "https://opencollective.com/stdlib"
|
|
108
110
|
}
|
|
109
111
|
}
|
package/docs/repl.txt
DELETED
|
@@ -1,182 +0,0 @@
|
|
|
1
|
-
|
|
2
|
-
{{alias}}( x[, y][, options] )
|
|
3
|
-
Computes a one-sample or paired Wilcoxon signed rank test.
|
|
4
|
-
|
|
5
|
-
When no `y` is supplied, the function performs a one-sample Wilcoxon signed
|
|
6
|
-
rank test for the null hypothesis that the data is drawn from a symmetric
|
|
7
|
-
distribution around zero.
|
|
8
|
-
|
|
9
|
-
When `y` is supplied, the function tests whether the
|
|
10
|
-
differences `x - y` come from a symmetric distribution around zero.
|
|
11
|
-
|
|
12
|
-
If `x` has less than fifty elements, an exact p-value is computed if there
|
|
13
|
-
are no zero values or ties. Otherwise, a normal approximation is used.
|
|
14
|
-
|
|
15
|
-
The returned object comes with a `.print()` method which when invoked will
|
|
16
|
-
print a formatted output of the results of the hypothesis test.
|
|
17
|
-
|
|
18
|
-
Parameters
|
|
19
|
-
----------
|
|
20
|
-
x: Array<number>|TypedArray
|
|
21
|
-
Data array.
|
|
22
|
-
|
|
23
|
-
y: Array<number>|TypedArray (optional)
|
|
24
|
-
Paired data array.
|
|
25
|
-
|
|
26
|
-
options: Object (optional)
|
|
27
|
-
Options.
|
|
28
|
-
|
|
29
|
-
options.alpha: number (optional)
|
|
30
|
-
Number in the interval `[0,1]` giving the significance level of the
|
|
31
|
-
hypothesis test. Default: `0.05`.
|
|
32
|
-
|
|
33
|
-
options.alternative: string (optional)
|
|
34
|
-
Indicates whether the alternative hypothesis is that the mean of `x` is
|
|
35
|
-
larger than `mu` (`greater`), smaller than `mu` (`less`), or equal to
|
|
36
|
-
`mu` (`two-sided`). Default: `'two-sided'`.
|
|
37
|
-
|
|
38
|
-
options.correction: boolean (optional)
|
|
39
|
-
Determines whether to apply continuity correction adjusting the Wilcoxon
|
|
40
|
-
rank statistic by 0.5 towards the mean when using the normal
|
|
41
|
-
approximation. Default: `true`.
|
|
42
|
-
|
|
43
|
-
options.exact: boolean (optional)
|
|
44
|
-
Determines whether to force use of the exact distribution instead of a
|
|
45
|
-
normal approximation when there are more than fifty data points.
|
|
46
|
-
Default: `false`.
|
|
47
|
-
|
|
48
|
-
options.mu: number (optional)
|
|
49
|
-
Hypothesized true location under the null hypothesis. Set this option to
|
|
50
|
-
test whether the data comes from a distribution with the specified `mu`.
|
|
51
|
-
Default: `0`.
|
|
52
|
-
|
|
53
|
-
options.zeroMethod: string (optional)
|
|
54
|
-
Method governing how zero-differences are handled (`pratt`, `wilcox`, or
|
|
55
|
-
`zsplit`). When set to `pratt`, differences of zero are used to
|
|
56
|
-
calculate ranks but their ranks are then dropped. When set to `wilcox`,
|
|
57
|
-
all zero-differences are discarded. When set to `zsplit`, differences of
|
|
58
|
-
zero are used to rank and their ranks are then split between positive
|
|
59
|
-
and negative ones. Default: `'wilcox'`.
|
|
60
|
-
|
|
61
|
-
Returns
|
|
62
|
-
-------
|
|
63
|
-
out: Object
|
|
64
|
-
Test result object.
|
|
65
|
-
|
|
66
|
-
out.alpha: number
|
|
67
|
-
Used significance level.
|
|
68
|
-
|
|
69
|
-
out.rejected: boolean
|
|
70
|
-
Test decision.
|
|
71
|
-
|
|
72
|
-
out.pValue: number
|
|
73
|
-
p-value of the test.
|
|
74
|
-
|
|
75
|
-
out.statistic: number
|
|
76
|
-
Value of test statistic.
|
|
77
|
-
|
|
78
|
-
out.nullValue: number
|
|
79
|
-
Assumed location parameter under H0.
|
|
80
|
-
|
|
81
|
-
out.alternative: string
|
|
82
|
-
Alternative hypothesis (`two-sided`, `less` or `greater`).
|
|
83
|
-
|
|
84
|
-
out.method: string
|
|
85
|
-
Name of test.
|
|
86
|
-
|
|
87
|
-
out.print: Function
|
|
88
|
-
Function to print formatted output.
|
|
89
|
-
|
|
90
|
-
Examples
|
|
91
|
-
--------
|
|
92
|
-
// One-sample test:
|
|
93
|
-
> var arr = [ 6, 8, 14, 16, 23, 24, 28, 29, 41, -48, 49, 56, 60, -67, 75 ];
|
|
94
|
-
> var out = {{alias}}( x )
|
|
95
|
-
{
|
|
96
|
-
'rejected': true,
|
|
97
|
-
'alpha': 0.05,
|
|
98
|
-
'pValue': 0.04125976562499978,
|
|
99
|
-
'statistic': 96
|
|
100
|
-
// ...
|
|
101
|
-
}
|
|
102
|
-
|
|
103
|
-
// Paired test:
|
|
104
|
-
> runif = {{alias:@stdlib/random/base/discrete-uniform}}.factory( 1, 5, { 'seed': 786 });
|
|
105
|
-
> var x = new Array( 100 );
|
|
106
|
-
> var y = new Array( 100 );
|
|
107
|
-
> for ( i = 0; i < x.length; i++ ) {
|
|
108
|
-
... x[ i ] = runif();
|
|
109
|
-
... y[ i ] = runif();
|
|
110
|
-
... }
|
|
111
|
-
> out = {{alias}}( x, y )
|
|
112
|
-
{
|
|
113
|
-
'rejected': false,
|
|
114
|
-
'alpha': 0.05,
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'pValue': 0.21759090963694638,
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'statistic': 2702.5,
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// ...
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}
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// Print formatted output:
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> var table = out.print()
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Paired Wilcoxon signed rank test
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Alternative hypothesis: Median of the difference `x - y` is not equal to 0
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pValue: 0.2176
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statistic: 2702.5
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Test Decision: Fail to reject null in favor of alternative at 5% significance level
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// Choose custom significance level:
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> out = {{alias}}( arr, { 'alpha': 0.01 });
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> table = out.print()
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One-Sample Wilcoxon signed rank test
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Alternative hypothesis: Median of `x` is not equal to 0
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pValue: 0.0413
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statistic: 96
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Test Decision: Fail to reject null in favor of alternative at 1% significance level
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// Test for a median equal to ten:
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> out = {{alias}}( arr, { 'mu': 10 })
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{
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'rejected': false,
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'alpha': 0.05,
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'pValue': 0.11169650413134602,
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'statistic': 88.5,
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'nullValue': 10,
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// ...
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}
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// Perform one-sided tests:
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> out = {{alias}}( arr, { 'alternative': 'less' });
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> table = out.print()
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One-Sample Wilcoxon signed rank test
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Alternative hypothesis: Median of `x` is less than 0
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pValue: 0.9823
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statistic: 96
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Test Decision: Fail to reject null in favor of alternative at 5% significance level
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> out = {{alias}}( arr, { 'alternative': 'greater' });
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> table = out.print()
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One-Sample Wilcoxon signed rank test
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Alternative hypothesis: Median of `x` is greater than 0
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pValue: 0.0206
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statistic: 96
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Test Decision: Reject null in favor of alternative at 5% significance level
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See Also
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--------
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package/docs/types/test.ts
DELETED
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/*
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* @license Apache-2.0
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* Copyright (c) 2021 The Stdlib Authors.
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*
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* Licensed under the Apache License, Version 2.0 (the "License");
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* you may not use this file except in compliance with the License.
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* You may obtain a copy of the License at
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*
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* http://www.apache.org/licenses/LICENSE-2.0
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*
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* Unless required by applicable law or agreed to in writing, software
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* distributed under the License is distributed on an "AS IS" BASIS,
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* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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* See the License for the specific language governing permissions and
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* limitations under the License.
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*/
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import wilcoxon = require( './index' );
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// TESTS //
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// The function returns an object with ordered x-values and fitted values...
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{
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const arr = [ 6, 8, 14, 16, 23, 24, 28, 29, 41, -48, 49, 56, 60, -67, 75 ];
|
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wilcoxon( arr ); // $ExpectType Results
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-
wilcoxon( arr, { 'mu': 2 } ); // $ExpectType Results
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-
const x = [ 1.83, 0.50, 1.62, 2.48, 1.68, 1.88, 1.55, 3.06, 1.30 ];
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const y = [ 0.878, 0.647, 0.598, 2.05, 1.06, 1.29, 1.06, 3.14, 1.29 ];
|
|
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-
wilcoxon( x, y, { 'correction': false } ); // $ExpectType Results
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-
}
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-
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-
// The function does not compile if provided a first argument that is not an array of numbers...
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{
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const y = [ 0.878, 0.647, 0.598, 2.05, 1.06, 1.29, 1.06, 3.14, 1.29 ];
|
|
37
|
-
wilcoxon( 'abc' ); // $ExpectError
|
|
38
|
-
wilcoxon( true ); // $ExpectError
|
|
39
|
-
wilcoxon( false ); // $ExpectError
|
|
40
|
-
wilcoxon( null ); // $ExpectError
|
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41
|
-
wilcoxon( undefined ); // $ExpectError
|
|
42
|
-
wilcoxon( 5 ); // $ExpectError
|
|
43
|
-
wilcoxon( {} ); // $ExpectError
|
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|
-
wilcoxon( ( x: number ): number => x ); // $ExpectError
|
|
45
|
-
|
|
46
|
-
wilcoxon( 'abc', y ); // $ExpectError
|
|
47
|
-
wilcoxon( true, y ); // $ExpectError
|
|
48
|
-
wilcoxon( false, y ); // $ExpectError
|
|
49
|
-
wilcoxon( null, y ); // $ExpectError
|
|
50
|
-
wilcoxon( undefined, y ); // $ExpectError
|
|
51
|
-
wilcoxon( 5, y ); // $ExpectError
|
|
52
|
-
wilcoxon( {}, y ); // $ExpectError
|
|
53
|
-
wilcoxon( ( x: number ): number => x, y ); // $ExpectError
|
|
54
|
-
}
|
|
55
|
-
|
|
56
|
-
// The function does not compile if provided a second argument that is not an array of numbers or options object...
|
|
57
|
-
{
|
|
58
|
-
const x = [ 6, 8, 14, 16, 23, 24, 28, 29, 41, -48, 49, 56, 60, -67, 75 ];
|
|
59
|
-
wilcoxon( x, 'abc' ); // $ExpectError
|
|
60
|
-
wilcoxon( x, true ); // $ExpectError
|
|
61
|
-
wilcoxon( x, false ); // $ExpectError
|
|
62
|
-
wilcoxon( x, null ); // $ExpectError
|
|
63
|
-
wilcoxon( x, 5 ); // $ExpectError
|
|
64
|
-
wilcoxon( x, ( x: number ): number => x ); // $ExpectError
|
|
65
|
-
}
|
|
66
|
-
|
|
67
|
-
// The compiler throws an error if the function is provided a third argument which is not an options object...
|
|
68
|
-
{
|
|
69
|
-
const x = [ 1.83, 0.50, 1.62, 2.48, 1.68, 1.88, 1.55, 3.06, 1.30 ];
|
|
70
|
-
const y = [ 0.878, 0.647, 0.598, 2.05, 1.06, 1.29, 1.06, 3.14, 1.29 ];
|
|
71
|
-
wilcoxon( x, y, true ); // $ExpectError
|
|
72
|
-
wilcoxon( x, y, false ); // $ExpectError
|
|
73
|
-
wilcoxon( x, y, null ); // $ExpectError
|
|
74
|
-
wilcoxon( x, y, 5 ); // $ExpectError
|
|
75
|
-
wilcoxon( x, y, 'abc' ); // $ExpectError
|
|
76
|
-
wilcoxon( x, y, ( x: number ): number => x ); // $ExpectError
|
|
77
|
-
}
|
|
78
|
-
|
|
79
|
-
// The compiler throws an error if the function is provided an `alpha` option which is not a number...
|
|
80
|
-
{
|
|
81
|
-
const x = [ 1.83, 0.50, 1.62, 2.48, 1.68, 1.88, 1.55, 3.06, 1.30 ];
|
|
82
|
-
const y = [ 0.878, 0.647, 0.598, 2.05, 1.06, 1.29, 1.06, 3.14, 1.29 ];
|
|
83
|
-
wilcoxon( x, y, { 'alpha': 'abc' } ); // $ExpectError
|
|
84
|
-
wilcoxon( x, y, { 'alpha': true } ); // $ExpectError
|
|
85
|
-
wilcoxon( x, y, { 'alpha': false } ); // $ExpectError
|
|
86
|
-
wilcoxon( x, y, { 'alpha': null } ); // $ExpectError
|
|
87
|
-
wilcoxon( x, y, { 'alpha': [] } ); // $ExpectError
|
|
88
|
-
wilcoxon( x, y, { 'alpha': {} } ); // $ExpectError
|
|
89
|
-
wilcoxon( x, y, { 'alpha': ( x: number ): number => x } ); // $ExpectError
|
|
90
|
-
}
|
|
91
|
-
|
|
92
|
-
// The compiler throws an error if the function is provided a `alternative` option which is not a recognized alternative...
|
|
93
|
-
{
|
|
94
|
-
const x = [ 1.83, 0.50, 1.62, 2.48, 1.68, 1.88, 1.55, 3.06, 1.30 ];
|
|
95
|
-
const y = [ 0.878, 0.647, 0.598, 2.05, 1.06, 1.29, 1.06, 3.14, 1.29 ];
|
|
96
|
-
wilcoxon( x, y, { 'alternative': 'abc' } ); // $ExpectError
|
|
97
|
-
wilcoxon( x, y, { 'alternative': 123 } ); // $ExpectError
|
|
98
|
-
wilcoxon( x, y, { 'alternative': true } ); // $ExpectError
|
|
99
|
-
wilcoxon( x, y, { 'alternative': false } ); // $ExpectError
|
|
100
|
-
wilcoxon( x, y, { 'alternative': null } ); // $ExpectError
|
|
101
|
-
wilcoxon( x, y, { 'alternative': [] } ); // $ExpectError
|
|
102
|
-
wilcoxon( x, y, { 'alternative': {} } ); // $ExpectError
|
|
103
|
-
wilcoxon( x, y, { 'alternative': ( x: number ): number => x } ); // $ExpectError
|
|
104
|
-
}
|
|
105
|
-
|
|
106
|
-
// The compiler throws an error if the function is provided a `zeroMethod` option which is not a recognized method...
|
|
107
|
-
{
|
|
108
|
-
const x = [ 1.83, 0.50, 1.62, 2.48, 1.68, 1.88, 1.55, 3.06, 1.30 ];
|
|
109
|
-
const y = [ 0.878, 0.647, 0.598, 2.05, 1.06, 1.29, 1.06, 3.14, 1.29 ];
|
|
110
|
-
wilcoxon( x, y, { 'zeroMethod': 'abc' } ); // $ExpectError
|
|
111
|
-
wilcoxon( x, y, { 'zeroMethod': 123 } ); // $ExpectError
|
|
112
|
-
wilcoxon( x, y, { 'zeroMethod': true } ); // $ExpectError
|
|
113
|
-
wilcoxon( x, y, { 'zeroMethod': false } ); // $ExpectError
|
|
114
|
-
wilcoxon( x, y, { 'zeroMethod': null } ); // $ExpectError
|
|
115
|
-
wilcoxon( x, y, { 'zeroMethod': [] } ); // $ExpectError
|
|
116
|
-
wilcoxon( x, y, { 'zeroMethod': {} } ); // $ExpectError
|
|
117
|
-
wilcoxon( x, y, { 'zeroMethod': ( x: number ): number => x } ); // $ExpectError
|
|
118
|
-
}
|
|
119
|
-
|
|
120
|
-
// The compiler throws an error if the function is provided a `correction` option which is not a boolean...
|
|
121
|
-
{
|
|
122
|
-
const x = [ 1.83, 0.50, 1.62, 2.48, 1.68, 1.88, 1.55, 3.06, 1.30 ];
|
|
123
|
-
const y = [ 0.878, 0.647, 0.598, 2.05, 1.06, 1.29, 1.06, 3.14, 1.29 ];
|
|
124
|
-
wilcoxon( x, y, { 'correction': 'abc' } ); // $ExpectError
|
|
125
|
-
wilcoxon( x, y, { 'correction': '123' } ); // $ExpectError
|
|
126
|
-
wilcoxon( x, y, { 'correction': 123 } ); // $ExpectError
|
|
127
|
-
wilcoxon( x, y, { 'correction': null } ); // $ExpectError
|
|
128
|
-
wilcoxon( x, y, { 'correction': [] } ); // $ExpectError
|
|
129
|
-
wilcoxon( x, y, { 'correction': {} } ); // $ExpectError
|
|
130
|
-
wilcoxon( x, y, { 'correction': ( x: number ): number => x } ); // $ExpectError
|
|
131
|
-
}
|
|
132
|
-
|
|
133
|
-
// The compiler throws an error if the function is provided an `exact` option which is not a boolean...
|
|
134
|
-
{
|
|
135
|
-
const x = [ 1.83, 0.50, 1.62, 2.48, 1.68, 1.88, 1.55, 3.06, 1.30 ];
|
|
136
|
-
const y = [ 0.878, 0.647, 0.598, 2.05, 1.06, 1.29, 1.06, 3.14, 1.29 ];
|
|
137
|
-
wilcoxon( x, y, { 'exact': 'abc' } ); // $ExpectError
|
|
138
|
-
wilcoxon( x, y, { 'exact': '123' } ); // $ExpectError
|
|
139
|
-
wilcoxon( x, y, { 'exact': 123 } ); // $ExpectError
|
|
140
|
-
wilcoxon( x, y, { 'exact': null } ); // $ExpectError
|
|
141
|
-
wilcoxon( x, y, { 'exact': [] } ); // $ExpectError
|
|
142
|
-
wilcoxon( x, y, { 'exact': {} } ); // $ExpectError
|
|
143
|
-
wilcoxon( x, y, { 'exact': ( x: number ): number => x } ); // $ExpectError
|
|
144
|
-
}
|
|
145
|
-
|
|
146
|
-
// The compiler throws an error if the function is provided a `mu` option which is not a number...
|
|
147
|
-
{
|
|
148
|
-
const x = [ 1.83, 0.50, 1.62, 2.48, 1.68, 1.88, 1.55, 3.06, 1.30 ];
|
|
149
|
-
const y = [ 0.878, 0.647, 0.598, 2.05, 1.06, 1.29, 1.06, 3.14, 1.29 ];
|
|
150
|
-
wilcoxon( x, y, { 'mu': 'abc' } ); // $ExpectError
|
|
151
|
-
wilcoxon( x, y, { 'mu': true } ); // $ExpectError
|
|
152
|
-
wilcoxon( x, y, { 'mu': false } ); // $ExpectError
|
|
153
|
-
wilcoxon( x, y, { 'mu': null } ); // $ExpectError
|
|
154
|
-
wilcoxon( x, y, { 'mu': [] } ); // $ExpectError
|
|
155
|
-
wilcoxon( x, y, { 'mu': {} } ); // $ExpectError
|
|
156
|
-
wilcoxon( x, y, { 'mu': ( x: number ): number => x } ); // $ExpectError
|
|
157
|
-
}
|
|
158
|
-
|
|
159
|
-
// The function does not compile if provided an invalid number of arguments...
|
|
160
|
-
{
|
|
161
|
-
const x = [ 1.83, 0.50, 1.62, 2.48, 1.68, 1.88, 1.55, 3.06, 1.30 ];
|
|
162
|
-
const y = [ 0.878, 0.647, 0.598, 2.05, 1.06, 1.29, 1.06, 3.14, 1.29 ];
|
|
163
|
-
wilcoxon(); // $ExpectError
|
|
164
|
-
wilcoxon( x, y, {}, {} ); // $ExpectError
|
|
165
|
-
}
|