@staff0rd/assist 0.185.0 → 0.186.1

package/README.md

@@ -33,6 +33,7 @@ After installation, the `assist` command will be available globally. You can als
 
 ## Claude Commands
 
+- `/add-command` - Add a new run command to assist.yml
 - `/bug` - File a bug with reproduction steps, expected and actual behavior
 - `/comment` - Add pending review comments to the current PR
 - `/commit` - Commit only relevant files from the session

package/claude/commands/add-command.md

@@ -0,0 +1,28 @@
+---
+description: Add a new run command to assist.yml
+allowed_args: "[description of the command to add]"
+---
+
+The user wants to register a new run command via `assist run add`. This command adds a named entry to the `run` section of `assist.yml` so it can be invoked with `assist run <name>`.
+
+## Step 1: Understand the request
+
+If the user provided a description via $ARGUMENTS, use that as a starting point. Otherwise, ask what command they want to add.
+
+## Step 2: Determine the correct syntax
+
+Run `assist run add --help` to see the current CLI usage and options. Use the output to construct the correct command.
+
+## Step 3: Add the command
+
+Run `assist run add <name> <command> [args...]` with the appropriate arguments. For example:
+
+```
+assist run add lint biome check --write
+```
+
+If the command needs a working directory, use `--cwd <dir>`.
+
+## Step 4: Verify
+
+Run `assist run <name>` to confirm the command works, or `assist run <name> --help` if it accepts params.

package/dist/commands/backlog/web/bundle.js

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n=Ht();return(0,Ye.jsxs)("div",{className:"flex justify-between items-center mb-4",children:[(0,Ye.jsx)(wu,{to:"/"}),(0,Ye.jsxs)("div",{className:"flex gap-2",children:[(0,Ye.jsx)("button",{type:"button",className:"bg-gray-200 hover:bg-gray-300 text-gray-800 rounded-md px-4 py-2 text-sm font-medium cursor-pointer",onClick:()=>n(`/items/${e}/edit`),children:"Edit"}),(0,Ye.jsx)(VC,{itemId:e,onDeleted:t})]})]})}function kb({item:e,onReload:t}){let n=Ht();return(0,Ye.jsxs)(Ye.Fragment,{children:[(0,Ye.jsx)(FC,{itemId:e.id,onDeleted:async()=>{await t(),n("/")}}),(0,Ye.jsx)(Mb,{item:e,onStatusChange:async a=>{await Rv(e.id,a),await t()}})]})}var Od=w(D(),1);function Md({items:e,mode:t,onReload:n}){let{id:a}=kf(),l=Number(a),r=e.find(i=>i.id===l);return r?t==="edit"?(0,Od.jsx)(Ou,{item:r,onReload:n,backTo:`/items/${l}`}):(0,Od.jsx)(kb,{item:r,onReload:n}):null}var jt=w(D(),1);function zb({items:e,onReload:t}){return(0,jt.jsxs)(Kr,{children:[(0,jt.jsx)(Rn,{index:!0,element:(0,jt.jsx)(Eb,{items:e})}),(0,jt.jsx)(Rn,{path:"items/:id",element:(0,jt.jsx)(Md,{items:e,mode:"detail",onReload:t})}),(0,jt.jsx)(Rn,{path:"items/:id/edit",element:(0,jt.jsx)(Md,{items:e,mode:"edit",onReload:t})}),(0,jt.jsx)(Rn,{path:"add",element:(0,jt.jsx)(Ou,{onReload:t,backTo:"/"})})]})}var $l=w(D(),1);function YC(){let[e,t]=(0,Pl.useState)([]),n=(0,Pl.useCallback)(async()=>{t(await au())},[]);return(0,Pl.useEffect)(()=>{n()},[n]),(0,$l.jsx)(qf,{children:(0,$l.jsx)(Kr,{children:(0,$l.jsx)(Rn,{path:"/*",element:(0,$l.jsx)(zb,{items:e,onReload:n})})})})}var Ub=document.getElementById("app");Ub&&(0,Bb.createRoot)(Ub).render((0,$l.jsx)(YC,{}));})();
 /*! Bundled license information:
 
 react/cjs/react.production.js:

package/dist/index.js

@@ -6,7 +6,7 @@ import { Command } from "commander";
 // package.json
 var package_default = {
   name: "@staff0rd/assist",
-  version: "0.185.0",
+  version: "0.186.1",
   type: "module",
   main: "dist/index.js",
   bin: {
@@ -439,11 +439,7 @@ function ensureGitignore(dir) {
 `);
 }
 
-// src/commands/backlog/openDb.ts
-var _db;
-function getDbPath(dir) {
-  return join3(dir, ".assist", "backlog.db");
-}
+// src/commands/backlog/migrateCommentsAddId.ts
 function migrateCommentsAddId(db) {
   const cols = db.pragma("table_info(comments)");
   if (cols.length === 0 || cols.some((c) => c.name === "id")) return;
@@ -463,6 +459,24 @@ function migrateCommentsAddId(db) {
 		ALTER TABLE comments_new RENAME TO comments;
 	`);
 }
+function migrateToOneBasedPhases(db) {
+  const row = db.prepare(
+    "SELECT value FROM metadata WHERE key = 'one_based_phases_migrated'"
+  ).get();
+  if (row) return;
+  db.exec(`
+		UPDATE items SET current_phase = current_phase + 1 WHERE current_phase IS NOT NULL;
+		UPDATE comments SET phase = phase + 1 WHERE phase IS NOT NULL;
+		INSERT INTO metadata (key, value) VALUES ('one_based_phases_migrated', '1')
+			ON CONFLICT(key) DO UPDATE SET value = excluded.value;
+	`);
+}
+
+// src/commands/backlog/openDb.ts
+var _db;
+function getDbPath(dir) {
+  return join3(dir, ".assist", "backlog.db");
+}
 function initSchema(db) {
   db.exec(`
 		CREATE TABLE IF NOT EXISTS items (
@@ -524,6 +538,7 @@ function openDb(dir) {
   db.pragma("foreign_keys = ON");
   initSchema(db);
   migrateCommentsAddId(db);
+  migrateToOneBasedPhases(db);
   ensureGitignore(dir);
   _db = db;
   return db;
@@ -700,9 +715,7 @@ function typeLabel(type) {
 }
 function phaseLabel(item) {
   if (!item.plan) return "";
-  return chalk2.dim(
-    ` (phase ${(item.currentPhase ?? 0) + 1}/${item.plan.length})`
-  );
+  return chalk2.dim(` (phase ${item.currentPhase ?? 1}/${item.plan.length})`);
 }
 function isBlocked(item, items) {
   const deps2 = (item.links ?? []).filter((l) => l.type === "depends-on");
@@ -766,18 +779,18 @@ function buildCommentLines(comments2) {
 function formatPromptComment(entry) {
   const id = entry.id !== void 0 ? `#${entry.id} ` : "";
   const tag = entry.type === "summary" ? "[summary]" : "[comment]";
-  const phase = entry.phase !== void 0 ? ` (phase ${entry.phase + 1})` : "";
+  const phase = entry.phase !== void 0 ? ` (phase ${entry.phase})` : "";
   return `${id}${tag}${phase} ${entry.timestamp}
   ${entry.text}`;
 }
 
 // src/commands/backlog/buildAuthoredPhasePrompt.ts
-function buildAuthoredPhasePrompt(item, phaseIndex, phase) {
+function buildAuthoredPhasePrompt(item, phaseNumber, phase) {
   const manualChecks = phase.manualChecks ?? [];
   const needsConfirmation = manualChecks.length > 0;
   const confirmSuffix = needsConfirmation ? " and the user confirms" : "";
   return [
-    ...buildContextLines(item, phaseIndex, phase),
+    ...buildContextLines(item, phaseNumber, phase),
     "",
     "Focus ONLY on this phase. Do not work on other phases.",
     "When you have completed all tasks for this phase, run /verify to check your work.",
@@ -785,14 +798,14 @@ function buildAuthoredPhasePrompt(item, phaseIndex, phase) {
     "",
     `Post concise comments for any notable findings or changes using \`assist backlog comment ${item.id} "<text>"\`.`,
     "",
-    `Once verify passes${confirmSuffix}, run: assist backlog phase-done ${item.id} ${phaseIndex} "<summary>"`,
+    `Once verify passes${confirmSuffix}, run: assist backlog phase-done ${item.id} ${phaseNumber} "<summary>"`,
     "Replace <summary> with a concise summary of what was done in this phase."
   ].filter((line) => line !== void 0).join("\n");
 }
-function buildContextLines(item, phaseIndex, phase) {
+function buildContextLines(item, phaseNumber, phase) {
   const ac = item.acceptanceCriteria.map((c, i) => `${i + 1}. ${c}`).join("\n");
   return [
-    `You are implementing phase ${phaseIndex + 1} of backlog item #${item.id}: ${item.name}`,
+    `You are implementing phase ${phaseNumber} of backlog item #${item.id}: ${item.name}`,
     "",
     item.description ? `Description: ${item.description}` : "",
     "",
@@ -800,7 +813,7 @@ function buildContextLines(item, phaseIndex, phase) {
     ac,
     ...buildCommentLines(item.comments),
     "",
-    `Phase ${phaseIndex + 1}: ${phase.name}`,
+    `Phase ${phaseNumber}: ${phase.name}`,
     "Tasks:",
     formatTasks(phase)
   ];
@@ -822,7 +835,7 @@ function formatTasks(phase) {
 }
 
 // src/commands/backlog/buildReviewPrompt.ts
-function buildReviewPrompt(item, phaseIndex) {
+function buildReviewPrompt(item, phaseNumber) {
   const acLines = item.acceptanceCriteria.map((ac, i) => `${i + 1}. ${ac}`).join("\n");
   return [
     `You are reviewing backlog item #${item.id}: ${item.name}`,
@@ -846,17 +859,17 @@ function buildReviewPrompt(item, phaseIndex) {
     "Once the user confirms:",
     `1. Run: assist backlog done ${item.id} "<summary>"`,
     "2. Run: /commit",
-    `3. Run: assist backlog phase-done ${item.id} ${phaseIndex} "done"`
+    `3. Run: assist backlog phase-done ${item.id} ${phaseNumber} "done"`
   ].filter((line) => line !== void 0).join("\n");
 }
 
 // src/commands/backlog/buildPhasePrompt.ts
 var REVIEW_PHASE_NAME = "Review";
-function buildPhasePrompt(item, phaseIndex, phase) {
+function buildPhasePrompt(item, phaseNumber, phase) {
   if (phase.name === REVIEW_PHASE_NAME) {
-    return buildReviewPrompt(item, phaseIndex);
+    return buildReviewPrompt(item, phaseNumber);
   }
-  return buildAuthoredPhasePrompt(item, phaseIndex, phase);
+  return buildAuthoredPhasePrompt(item, phaseNumber, phase);
 }
 
 // src/commands/backlog/buildReviewPhase.ts
@@ -945,12 +958,14 @@ async function resolvePhaseResult(phaseIndex, itemId) {
   cleanupSignal();
   if (signal?.event === "rewind") {
     const targetPhase = signal.targetPhase;
+    const targetPhaseNumber = targetPhase + 1;
     console.log(chalk4.yellow(`
-Rewinding to phase ${targetPhase + 1}.`));
+Rewinding to phase ${targetPhaseNumber}.`));
     return targetPhase;
   }
+  const phaseNumber = phaseIndex + 1;
   console.log(chalk4.green(`
-Phase ${phaseIndex + 1} completed.`));
+Phase ${phaseNumber} completed.`));
   return phaseIndex + 1;
 }
 
@@ -991,16 +1006,17 @@ function stopWatching() {
 // src/commands/backlog/executePhase.ts
 async function executePhase(item, phaseIndex, phases, spawnOptions) {
   const phase = phases[phaseIndex];
+  const phaseNumber = phaseIndex + 1;
   console.log(
     chalk5.bold(
       `
---- Phase ${phaseIndex + 1}/${phases.length}: ${phase.name} ---
+--- Phase ${phaseNumber}/${phases.length}: ${phase.name} ---
 `
     )
   );
   process.env.ASSIST_SESSION_ID = String(process.pid);
   const { child, done: done2 } = spawnClaude(
-    buildPhasePrompt(item, phaseIndex, phase),
+    buildPhasePrompt(item, phaseNumber, phase),
     spawnOptions
   );
   watchForMarker(child);
@@ -1031,7 +1047,7 @@ function prepareRun(id) {
   if (!result) return void 0;
   const { item } = result;
   const plan2 = resolvePlan(item);
-  const startPhase = item.currentPhase ?? 0;
+  const startPhase = (item.currentPhase ?? 1) - 1;
   if (item.status === "done") {
     console.log(chalk6.green(`Already done: #${id}: ${item.name}`));
     return void 0;
@@ -1066,7 +1082,8 @@ async function run(id, spawnOptions) {
 function logProgress(id, name, startPhase, total) {
   console.log(chalk7.bold(`Running plan for #${id}: ${name}`));
   if (startPhase > 0) {
-    console.log(chalk7.dim(`Resuming from phase ${startPhase + 1}/${total}
+    const phaseNumber = startPhase + 1;
+    console.log(chalk7.dim(`Resuming from phase ${phaseNumber}/${total}
 `));
   } else {
     console.log(chalk7.dim(`${total} phase(s)
@@ -1173,7 +1190,8 @@ function addPhaseSummary(item, text, phase) {
 
 // src/commands/backlog/phaseDone.ts
 function phaseDone(id, phase, summary) {
-  const phaseIndex = Number.parseInt(phase, 10);
+  const phaseNumber = Number.parseInt(phase, 10);
+  const phaseIndex = phaseNumber - 1;
   writeSignal("phase-done", {
     itemId: Number.parseInt(id, 10),
     phaseIndex,
@@ -1185,11 +1203,13 @@ function phaseDone(id, phase, summary) {
     return;
   }
   if (result) {
-    addPhaseSummary(result.item, summary, phaseIndex);
+    addPhaseSummary(result.item, summary, phaseNumber);
     saveBacklog(result.items);
   }
-  setCurrentPhase(id, phaseIndex + 1);
-  console.log(chalk9.green(`Phase ${phase} of item #${id} marked as complete.`));
+  setCurrentPhase(id, phaseNumber + 1);
+  console.log(
+    chalk9.green(`Phase ${phaseNumber} of item #${id} marked as complete.`)
+  );
 }
 
 // src/commands/backlog/plan.ts
@@ -1221,7 +1241,7 @@ import chalk11 from "chalk";
 function formatComment(entry) {
   const id = entry.id !== void 0 ? chalk11.dim(`#${entry.id} `) : "";
   const tag = entry.type === "summary" ? chalk11.magenta("[summary]") : chalk11.cyan("[comment]");
-  const phase = entry.phase !== void 0 ? chalk11.dim(` (phase ${entry.phase + 1})`) : "";
+  const phase = entry.phase !== void 0 ? chalk11.dim(` (phase ${entry.phase})`) : "";
   const time = chalk11.dim(entry.timestamp);
   return `${id}${tag}${phase} ${time}
   ${entry.text}`;
@@ -1268,14 +1288,15 @@ function printPlan(item) {
   if (!item.plan || item.plan.length === 0) return;
   console.log(chalk14.bold("Plan"));
   for (const [i, phase] of item.plan.entries()) {
-    const isCurrent = item.currentPhase === i;
+    const isCurrent = item.currentPhase === i + 1;
     printPhase(phase, i, isCurrent);
   }
   console.log();
 }
 function phaseHeader(index, name, isCurrent) {
+  const phaseNumber = index + 1;
   const marker = isCurrent ? chalk14.green("\u25B6 ") : "  ";
-  const label2 = isCurrent ? chalk14.green.bold(`Phase ${index + 1}: ${name}`) : `${chalk14.bold(`Phase ${index + 1}:`)} ${name}`;
+  const label2 = isCurrent ? chalk14.green.bold(`Phase ${phaseNumber}: ${name}`) : `${chalk14.bold(`Phase ${phaseNumber}:`)} ${name}`;
   return `${marker}${label2}`;
 }
 function printPhase(phase, index, isCurrent) {
@@ -4200,25 +4221,26 @@ function registerLinkCommands(cmd) {
 
 // src/commands/backlog/rewindPhase.ts
 import chalk52 from "chalk";
-function validateRewind(item, phaseIndex) {
+function validateRewind(item, phaseNumber) {
   if (!item.plan || item.plan.length === 0) {
     return `Item #${item.id} has no plan phases.`;
   }
-  if (phaseIndex < 0 || phaseIndex >= item.plan.length) {
-    return `Phase ${phaseIndex} does not exist. Valid range: 0\u2013${item.plan.length - 1}.`;
+  if (phaseNumber < 1 || phaseNumber > item.plan.length) {
+    return `Phase ${phaseNumber} does not exist. Valid range: 1\u2013${item.plan.length}.`;
   }
-  const currentPhase = item.currentPhase ?? 0;
-  if (phaseIndex >= currentPhase) {
-    return `Phase ${phaseIndex} is not earlier than the current phase (${currentPhase}).`;
+  const currentPhase = item.currentPhase ?? 1;
+  if (phaseNumber >= currentPhase) {
+    return `Phase ${phaseNumber} is not earlier than the current phase (${currentPhase}).`;
   }
   return void 0;
 }
 function rewindPhase(id, phase, opts) {
-  const phaseIndex = Number.parseInt(phase, 10);
+  const phaseNumber = Number.parseInt(phase, 10);
+  const phaseIndex = phaseNumber - 1;
   const result = loadAndFindItem(id);
   if (!result) return;
   const { item } = result;
-  const error = validateRewind(item, phaseIndex);
+  const error = validateRewind(item, phaseNumber);
   if (error) {
     console.log(chalk52.red(error));
     process.exitCode = 1;
@@ -4227,18 +4249,18 @@ function rewindPhase(id, phase, opts) {
   const phaseName = item.plan?.[phaseIndex].name;
   addComment(
     item,
-    `Rewound to phase ${phaseIndex} (${phaseName}): ${opts.reason}`,
-    phaseIndex
+    `Rewound to phase ${phaseNumber} (${phaseName}): ${opts.reason}`,
+    phaseNumber
   );
   saveBacklog(result.items);
-  setCurrentPhase(id, phaseIndex);
+  setCurrentPhase(id, phaseNumber);
   setStatus(id, "in-progress");
   writeSignal("rewind", {
     itemId: Number.parseInt(id, 10),
     targetPhase: phaseIndex
   });
   console.log(
-    chalk52.green(`Rewound item #${id} to phase ${phaseIndex} (${phaseName}).`)
+    chalk52.green(`Rewound item #${id} to phase ${phaseNumber} (${phaseName}).`)
   );
 }
 
@@ -4304,8 +4326,8 @@ async function done(id, summary) {
   if (!result) return;
   const { item } = result;
   if (item.plan && item.plan.length > 0) {
-    const completed = item.currentPhase ?? 0;
-    const pending = item.plan.slice(completed);
+    const completedCount = (item.currentPhase ?? 1) - 1;
+    const pending = item.plan.slice(completedCount);
     if (pending.length > 0) {
       console.log(
         chalk55.red(
@@ -4321,7 +4343,7 @@ async function done(id, summary) {
   }
   item.status = "done";
   if (summary) {
-    const phase = item.currentPhase ?? 0;
+    const phase = item.currentPhase ?? 1;
     addPhaseSummary(item, summary, phase);
   }
   saveBacklog(result.items);
@@ -4344,7 +4366,7 @@ async function wontdo(id, reason) {
   if (!result) return;
   result.item.status = "wontdo";
   if (reason) {
-    const phase = result.item.currentPhase ?? 0;
+    const phase = result.item.currentPhase ?? 1;
     addPhaseSummary(result.item, reason, phase);
   }
   saveBacklog(result.items);
@@ -4370,12 +4392,15 @@ function findPhase(id, phase) {
   const dir = getBacklogDir();
   const db = openDb(dir);
   const itemId = result.item.id;
-  const phaseIdx = Number.parseInt(phase, 10);
+  const phaseNumber = Number.parseInt(phase, 10);
+  const phaseIdx = phaseNumber - 1;
   const existing = db.prepare(
     "SELECT COUNT(*) as cnt FROM plan_phases WHERE item_id = ? AND idx = ?"
   ).get(itemId, phaseIdx);
   if (existing.cnt === 0) {
-    console.log(chalk58.red(`Phase ${phaseIdx} not found on item #${itemId}.`));
+    console.log(
+      chalk58.red(`Phase ${phaseNumber} not found on item #${itemId}.`)
+    );
     process.exitCode = 1;
     return void 0;
   }
@@ -4397,14 +4422,15 @@ function reindexPhases(db, itemId) {
 }
 function adjustCurrentPhase(db, item, removedIdx) {
   if (item.currentPhase === void 0) return;
-  if (removedIdx < item.currentPhase) {
+  const currentIdx = item.currentPhase - 1;
+  if (removedIdx < currentIdx) {
     db.prepare("UPDATE items SET current_phase = ? WHERE id = ?").run(
       item.currentPhase - 1,
       item.id
     );
-  } else if (removedIdx === item.currentPhase) {
+  } else if (removedIdx === currentIdx) {
     const { cnt } = db.prepare("SELECT COUNT(*) as cnt FROM plan_phases WHERE item_id = ?").get(item.id);
-    const newPhase = cnt === 0 ? null : Math.min(item.currentPhase, cnt - 1);
+    const newPhase = cnt === 0 ? null : Math.min(item.currentPhase, cnt);
     db.prepare("UPDATE items SET current_phase = ? WHERE id = ?").run(
       newPhase,
       item.id
@@ -4431,7 +4457,9 @@ function removePhase(id, phase) {
   run4();
   exportToJsonl(db, dir);
   commitBacklog(itemId, result.item.name);
-  console.log(chalk59.green(`Removed phase ${phaseIdx} from item #${itemId}.`));
+  console.log(
+    chalk59.green(`Removed phase ${phaseIdx + 1} from item #${itemId}.`)
+  );
 }
 
 // src/commands/backlog/update/index.ts
@@ -4546,7 +4574,9 @@ function updatePhase(id, phase, options2) {
     manualCheck && "manual checks"
   ].filter(Boolean).join(", ");
   console.log(
-    chalk62.green(`Updated ${fields} on phase ${phaseIdx} of item #${itemId}.`)
+    chalk62.green(
+      `Updated ${fields} on phase ${phaseIdx + 1} of item #${itemId}.`
+    )
   );
 }
 

package/package.json

@@ -1,6 +1,6 @@
 {
 	"name": "@staff0rd/assist",
-	"version": "0.185.0",
+	"version": "0.186.1",
 	"type": "module",
 	"main": "dist/index.js",
 	"bin": {