@stackbilt/cli 0.1.16 → 0.1.18

package/README.md

@@ -83,6 +83,7 @@ Use JSON output and explicit CI semantics:
 ```bash
 charter --format json
 charter setup --ci github --yes --format json
+charter setup --ci github --yes --no-dependency-sync --format json
 charter doctor --format json
 charter validate --format json --ci
 charter drift --format json --ci
@@ -99,6 +100,8 @@ Agent decision rules:
 - If framework signals look wrong, inspect `detected.sources` and rerun setup with an explicit `--preset`.
 - Treat `validate --ci` and `drift --ci` as blocking checks.
 - `validate` and `audit` both report commit range explicitly so coverage numbers are comparable.
+- Use `validate.evidence.policyOffenders` for strict-trailer failures and `validate.evidence.riskOffenders` for threshold-based risk failures.
+- `policyOffenders` are policy-context entries (not risk-rule findings); risk metadata is attached to `riskOffenders`.
 
 ## LM Agent Ops Flow
 
@@ -154,6 +157,8 @@ charter setup --preset fullstack --ci github --yes
 
 Detection output includes `detected.sources` in JSON mode so agents can verify which manifests were scanned before applying a baseline.
 Setup also adds optional root scripts when missing: `charter:detect` and `charter:setup`.
+Setup JSON now includes `mutationPlan` and `appliedMutations` so side effects are explicit before/after apply.
+Setup baseline mutation metadata now includes `configHashBefore`, `configHashAfter`, and `writesPerformed`.
 
 ### `charter init`
 
@@ -207,6 +212,7 @@ charter classify "update button color"
 Setup-only options:
 - `--preset <worker|frontend|backend|fullstack>`: override auto-detected preset
 - `--detect-only`: print stack detection result and selected preset without writing files
+- `--no-dependency-sync`: skip rewriting `devDependencies["@stackbilt/cli"]` during setup
 
 ## Exit Codes
 

package/dist/commands/init.d.ts

@@ -9,6 +9,7 @@ interface InitResult {
     created: boolean;
     configPath: string;
     files: string[];
+    writesPerformed: number;
 }
 interface InitializeOptions {
     projectName?: string;

package/dist/commands/init.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"init.d.ts","sourceRoot":"","sources":["../../src/commands/init.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAIH,OAAO,KAAK,EAAE,UAAU,EAAE,MAAM,UAAU,CAAC;AAI3C,MAAM,MAAM,WAAW,GAAG,QAAQ,GAAG,UAAU,GAAG,SAAS,GAAG,WAAW,CAAC;AAsL1E,UAAU,UAAU;IAClB,OAAO,EAAE,OAAO,CAAC;IACjB,UAAU,EAAE,MAAM,CAAC;IACnB,KAAK,EAAE,MAAM,EAAE,CAAC;CACjB;AAED,UAAU,iBAAiB;IACzB,WAAW,CAAC,EAAE,MAAM,CAAC;IACrB,MAAM,CAAC,EAAE,WAAW,CAAC;IACrB,QAAQ,CAAC,EAAE;QACT,UAAU,CAAC,EAAE,OAAO,CAAC;QACrB,IAAI,CAAC,EAAE,OAAO,CAAC;QACf,KAAK,CAAC,EAAE,OAAO,CAAC;QAChB,IAAI,CAAC,EAAE,OAAO,CAAC;KAChB,CAAC;CACH;AAED,wBAAsB,WAAW,CAAC,OAAO,EAAE,UAAU,EAAE,IAAI,GAAE,MAAM,EAAO,GAAG,OAAO,CAAC,MAAM,CAAC,CA8B3F;AAED,wBAAgB,iBAAiB,CAAC,SAAS,EAAE,MAAM,EAAE,KAAK,EAAE,OAAO,EAAE,WAAW,GAAE,iBAAsB,GAAG,UAAU,CAuCpH"}
+{"version":3,"file":"init.d.ts","sourceRoot":"","sources":["../../src/commands/init.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAIH,OAAO,KAAK,EAAE,UAAU,EAAE,MAAM,UAAU,CAAC;AAI3C,MAAM,MAAM,WAAW,GAAG,QAAQ,GAAG,UAAU,GAAG,SAAS,GAAG,WAAW,CAAC;AAsL1E,UAAU,UAAU;IAClB,OAAO,EAAE,OAAO,CAAC;IACjB,UAAU,EAAE,MAAM,CAAC;IACnB,KAAK,EAAE,MAAM,EAAE,CAAC;IAChB,eAAe,EAAE,MAAM,CAAC;CACzB;AAED,UAAU,iBAAiB;IACzB,WAAW,CAAC,EAAE,MAAM,CAAC;IACrB,MAAM,CAAC,EAAE,WAAW,CAAC;IACrB,QAAQ,CAAC,EAAE;QACT,UAAU,CAAC,EAAE,OAAO,CAAC;QACrB,IAAI,CAAC,EAAE,OAAO,CAAC;QACf,KAAK,CAAC,EAAE,OAAO,CAAC;QAChB,IAAI,CAAC,EAAE,OAAO,CAAC;KAChB,CAAC;CACH;AAED,wBAAsB,WAAW,CAAC,OAAO,EAAE,UAAU,EAAE,IAAI,GAAE,MAAM,EAAO,GAAG,OAAO,CAAC,MAAM,CAAC,CA8B3F;AAED,wBAAgB,iBAAiB,CAAC,SAAS,EAAE,MAAM,EAAE,KAAK,EAAE,OAAO,EAAE,WAAW,GAAE,iBAAsB,GAAG,UAAU,CAqCpH"}

package/dist/commands/init.js

@@ -256,6 +256,7 @@ function initializeCharter(configDir, force, initOptions = {}) {
             created: false,
             configPath: configDir,
             files: [],
+            writesPerformed: 0,
         };
     }
     const dirs = [configDir, path.join(configDir, 'patterns'), path.join(configDir, 'policies')];
@@ -264,12 +265,17 @@ function initializeCharter(configDir, force, initOptions = {}) {
     }
     const selectedPreset = initOptions.preset || 'fullstack';
     const patterns = buildPatternTemplate(selectedPreset, initOptions.features);
-    fs.writeFileSync(configFile, (0, config_1.getDefaultConfigJSON)(initOptions.projectName) + '\n');
-    fs.writeFileSync(path.join(configDir, 'patterns', 'blessed-stack.json'), JSON.stringify(patterns, null, 2) + '\n');
-    fs.writeFileSync(path.join(configDir, 'policies', 'governance.md'), DEFAULT_POLICY_CONTENT);
-    fs.writeFileSync(path.join(configDir, '.gitignore'), GITIGNORE_CONTENT);
+    let writesPerformed = 0;
+    if (writeIfChanged(configFile, (0, config_1.getDefaultConfigJSON)(initOptions.projectName) + '\n'))
+        writesPerformed++;
+    if (writeIfChanged(path.join(configDir, 'patterns', 'blessed-stack.json'), JSON.stringify(patterns, null, 2) + '\n'))
+        writesPerformed++;
+    if (writeIfChanged(path.join(configDir, 'policies', 'governance.md'), DEFAULT_POLICY_CONTENT))
+        writesPerformed++;
+    if (writeIfChanged(path.join(configDir, '.gitignore'), GITIGNORE_CONTENT))
+        writesPerformed++;
     return {
-        created: true,
+        created: !exists,
         configPath: configDir,
         files: [
             'config.json',
@@ -277,8 +283,19 @@ function initializeCharter(configDir, force, initOptions = {}) {
             'policies/governance.md',
             '.gitignore',
         ],
+        writesPerformed,
     };
 }
+function writeIfChanged(targetPath, content) {
+    if (fs.existsSync(targetPath)) {
+        const existing = fs.readFileSync(targetPath, 'utf-8');
+        if (existing === content) {
+            return false;
+        }
+    }
+    fs.writeFileSync(targetPath, content);
+    return true;
+}
 function isValidPreset(value) {
     return value === 'worker' || value === 'frontend' || value === 'backend' || value === 'fullstack';
 }

package/dist/commands/init.js.map

@@ -1 +1 @@
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+{"version":3,"file":"init.js","sourceRoot":"","sources":["../../src/commands/init.ts"],"names":[],"mappings":";AAAA;;;;GAIG;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;AAgNH,kCA8BC;AAED,8CAqCC;AAnRD,4CAA8B;AAC9B,gDAAkC;AAElC,oCAAqC;AACrC,sCAAiD;AAIjD,MAAM,iBAAiB,GAAmC;IACxD,MAAM,EAAE;QACN;YACE,IAAI,EAAE,cAAc;YACpB,QAAQ,EAAE,SAAS;YACnB,gBAAgB,EAAE,qCAAqC;YACvD,SAAS,EAAE,oCAAoC;YAC/C,aAAa,EAAE,6CAA6C;YAC5D,MAAM,EAAE,QAAQ;SACjB;QACD;YACE,IAAI,EAAE,WAAW;YACjB,QAAQ,EAAE,MAAM;YAChB,gBAAgB,EAAE,2CAA2C;YAC7D,SAAS,EAAE,qCAAqC;YAChD,aAAa,EAAE,gDAAgD;YAC/D,MAAM,EAAE,QAAQ;SACjB;QACD;YACE,IAAI,EAAE,kBAAkB;YACxB,QAAQ,EAAE,OAAO;YACjB,gBAAgB,EAAE,8CAA8C;YAChE,SAAS,EAAE,sCAAsC;YACjD,aAAa,EAAE,+CAA+C;YAC9D,MAAM,EAAE,QAAQ;SACjB;QACD;YACE,IAAI,EAAE,eAAe;YACrB,QAAQ,EAAE,UAAU;YACpB,gBAAgB,EAAE,+CAA+C;YACjE,SAAS,EAAE,0CAA0C;YACrD,aAAa,EAAE,gDAAgD;YAC/D,MAAM,EAAE,QAAQ;SACjB;KACF;IACD,QAAQ,EAAE;QACR;YACE,IAAI,EAAE,kBAAkB;YACxB,QAAQ,EAAE,SAAS;YACnB,gBAAgB,EAAE,sCAAsC;YACxD,SAAS,EAAE,gDAAgD;YAC3D,aAAa,EAAE,oDAAoD;YACnE,MAAM,EAAE,QAAQ;SACjB;QACD;YACE,IAAI,EAAE,kBAAkB;YACxB,QAAQ,EAAE,aAAa;YACvB,gBAAgB,EAAE,0CAA0C;YAC5D,SAAS,EAAE,kCAAkC;YAC7C,aAAa,EAAE,8CAA8C;YAC7D,MAAM,EAAE,QAAQ;SACjB;QACD;YACE,IAAI,EAAE,oBAAoB;YAC1B,QAAQ,EAAE,aAAa;YACvB,gBAAgB,EAAE,kCAAkC;YACpD,SAAS,EAAE,2CAA2C;YACtD,aAAa,EAAE,mDAAmD;YAClE,MAAM,EAAE,QAAQ;SACjB;QACD;YACE,IAAI,EAAE,mBAAmB;YACzB,QAAQ,EAAE,UAAU;YACpB,gBAAgB,EAAE,+CAA+C;YACjE,SAAS,EAAE,2CAA2C;YACtD,aAAa,EAAE,2CAA2C;YAC1D,MAAM,EAAE,QAAQ;SACjB;KACF;IACD,OAAO,EAAE;QACP;YACE,IAAI,EAAE,iBAAiB;YACvB,QAAQ,EAAE,SAAS;YACnB,gBAAgB,EAAE,oDAAoD;YACtE,SAAS,EAAE,0CAA0C;YACrD,aAAa,EAAE,oDAAoD;YACnE,MAAM,EAAE,QAAQ;SACjB;QACD;YACE,IAAI,EAAE,mBAAmB;YACzB,QAAQ,EAAE,MAAM;YAChB,gBAAgB,EAAE,qDAAqD;YACvE,SAAS,EAAE,yCAAyC;YACpD,aAAa,EAAE,+CAA+C;YAC9D,MAAM,EAAE,QAAQ;SACjB;QACD;YACE,IAAI,EAAE,YAAY;YAClB,QAAQ,EAAE,OAAO;YACjB,gBAAgB,EAAE,sDAAsD;YACxE,SAAS,EAAE,2CAA2C;YACtD,aAAa,EAAE,uDAAuD;YACtE,MAAM,EAAE,QAAQ;SACjB;QACD;YACE,IAAI,EAAE,cAAc;YACpB,QAAQ,EAAE,UAAU;YACpB,gBAAgB,EAAE,wDAAwD;YAC1E,SAAS,EAAE,4CAA4C;YACvD,aAAa,EAAE,iDAAiD;YAChE,MAAM,EAAE,QAAQ;SACjB;KACF;IACD,SAAS,EAAE;QACT;YACE,IAAI,EAAE,mBAAmB;YACzB,QAAQ,EAAE,SAAS;YACnB,gBAAgB,EAAE,kDAAkD;YACpE,SAAS,EAAE,iDAAiD;YAC5D,aAAa,EAAE,2DAA2D;YAC1E,MAAM,EAAE,QAAQ;SACjB;QACD;YACE,IAAI,EAAE,oBAAoB;YAC1B,QAAQ,EAAE,MAAM;YAChB,gBAAgB,EAAE,yDAAyD;YAC3E,SAAS,EAAE,iDAAiD;YAC5D,aAAa,EAAE,wDAAwD;YACvE,MAAM,EAAE,QAAQ;SACjB;QACD;YACE,IAAI,EAAE,0BAA0B;YAChC,QAAQ,EAAE,aAAa;YACvB,gBAAgB,EAAE,mCAAmC;YACrD,SAAS,EAAE,sDAAsD;YACjE,aAAa,EAAE,oDAAoD;YACnE,MAAM,EAAE,QAAQ;SACjB;QACD;YACE,IAAI,EAAE,uBAAuB;YAC7B,QAAQ,EAAE,OAAO;YACjB,gBAAgB,EAAE,uDAAuD;YACzE,SAAS,EAAE,sDAAsD;YACjE,aAAa,EAAE,yDAAyD;YACxE,MAAM,EAAE,QAAQ;SACjB;QACD;YACE,IAAI,EAAE,mBAAmB;YACzB,QAAQ,EAAE,UAAU;YACpB,gBAAgB,EAAE,sDAAsD;YACxE,SAAS,EAAE,sDAAsD;YACjE,aAAa,EAAE,uDAAuD;YACtE,MAAM,EAAE,QAAQ;SACjB;KACF;CACF,CAAC;AAEF,MAAM,sBAAsB,GAAG;;;;;;;;;;;;;;;;;;;;;;;;;;;CA2B9B,CAAC;AAEF,MAAM,iBAAiB,GAAG;;CAEzB,CAAC;AAoBK,KAAK,UAAU,WAAW,CAAC,OAAmB,EAAE,OAAiB,EAAE;IACxE,MAAM,KAAK,GAAG,OAAO,CAAC,GAAG,IAAI,IAAI,CAAC,QAAQ,CAAC,SAAS,CAAC,CAAC;IACtD,MAAM,UAAU,GAAG,OAAO,CAAC,IAAI,EAAE,UAAU,CAAC,CAAC;IAC7C,MAAM,MAAM,GAAG,aAAa,CAAC,UAAU,CAAC,CAAC,CAAC,CAAC,UAAU,CAAC,CAAC,CAAC,SAAS,CAAC;IAClE,MAAM,MAAM,GAAG,iBAAiB,CAAC,OAAO,CAAC,UAAU,EAAE,KAAK,EAAE,EAAE,MAAM,EAAE,CAAC,CAAC;IAExE,IAAI,OAAO,CAAC,MAAM,KAAK,MAAM,EAAE,CAAC;QAC9B,OAAO,CAAC,GAAG,CAAC,IAAI,CAAC,SAAS,CAAC,MAAM,EAAE,IAAI,EAAE,CAAC,CAAC,CAAC,CAAC;QAC7C,OAAO,iBAAS,CAAC,OAAO,CAAC;IAC3B,CAAC;IAED,IAAI,CAAC,MAAM,CAAC,OAAO,EAAE,CAAC;QACpB,OAAO,CAAC,GAAG,CAAC,iCAAiC,MAAM,CAAC,UAAU,EAAE,CAAC,CAAC;QAClE,OAAO,CAAC,GAAG,CAAC,oFAAoF,CAAC,CAAC;QAClG,OAAO,iBAAS,CAAC,OAAO,CAAC;IAC3B,CAAC;IAED,OAAO,CAAC,GAAG,CAAC,8BAA8B,MAAM,CAAC,UAAU,GAAG,CAAC,CAAC;IAChE,OAAO,CAAC,GAAG,CAAC,EAAE,CAAC,CAAC;IAChB,OAAO,CAAC,GAAG,CAAC,YAAY,CAAC,CAAC;IAC1B,KAAK,MAAM,IAAI,IAAI,MAAM,CAAC,KAAK,EAAE,CAAC;QAChC,OAAO,CAAC,GAAG,CAAC,OAAO,IAAI,EAAE,CAAC,CAAC;IAC7B,CAAC;IACD,OAAO,CAAC,GAAG,CAAC,EAAE,CAAC,CAAC;IAChB,OAAO,CAAC,GAAG,CAAC,eAAe,CAAC,CAAC;IAC7B,OAAO,CAAC,GAAG,CAAC,+DAA+D,CAAC,CAAC;IAC7E,OAAO,CAAC,GAAG,CAAC,qDAAqD,CAAC,CAAC;IACnE,OAAO,CAAC,GAAG,CAAC,8BAA8B,CAAC,CAAC;IAE5C,OAAO,iBAAS,CAAC,OAAO,CAAC;AAC3B,CAAC;AAED,SAAgB,iBAAiB,CAAC,SAAiB,EAAE,KAAc,EAAE,cAAiC,EAAE;IACtG,MAAM,UAAU,GAAG,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,aAAa,CAAC,CAAC;IACvD,MAAM,MAAM,GAAG,EAAE,CAAC,UAAU,CAAC,UAAU,CAAC,CAAC;IAEzC,IAAI,MAAM,IAAI,CAAC,KAAK,EAAE,CAAC;QACrB,OAAO;YACL,OAAO,EAAE,KAAK;YACd,UAAU,EAAE,SAAS;YACrB,KAAK,EAAE,EAAE;YACT,eAAe,EAAE,CAAC;SACnB,CAAC;IACJ,CAAC;IAED,MAAM,IAAI,GAAG,CAAC,SAAS,EAAE,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,UAAU,CAAC,EAAE,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,UAAU,CAAC,CAAC,CAAC;IAC7F,KAAK,MAAM,GAAG,IAAI,IAAI,EAAE,CAAC;QACvB,EAAE,CAAC,SAAS,CAAC,GAAG,EAAE,EAAE,SAAS,EAAE,IAAI,EAAE,CAAC,CAAC;IACzC,CAAC;IAED,MAAM,cAAc,GAAG,WAAW,CAAC,MAAM,IAAI,WAAW,CAAC;IACzD,MAAM,QAAQ,GAAG,oBAAoB,CAAC,cAAc,EAAE,WAAW,CAAC,QAAQ,CAAC,CAAC;IAC5E,IAAI,eAAe,GAAG,CAAC,CAAC;IACxB,IAAI,cAAc,CAAC,UAAU,EAAE,IAAA,6BAAoB,EAAC,WAAW,CAAC,WAAW,CAAC,GAAG,IAAI,CAAC;QAAE,eAAe,EAAE,CAAC;IACxG,IAAI,cAAc,CAA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package/dist/commands/setup.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"setup.d.ts","sourceRoot":"","sources":["../../src/commands/setup.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAIH,OAAO,KAAK,EAAE,UAAU,EAAE,MAAM,UAAU,CAAC;AA2G3C,wBAAsB,YAAY,CAAC,OAAO,EAAE,UAAU,EAAE,IAAI,EAAE,MAAM,EAAE,GAAG,OAAO,CAAC,MAAM,CAAC,CAuJvF"}
+{"version":3,"file":"setup.d.ts","sourceRoot":"","sources":["../../src/commands/setup.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAKH,OAAO,KAAK,EAAE,UAAU,EAAE,MAAM,UAAU,CAAC;AA2I3C,wBAAsB,YAAY,CAAC,OAAO,EAAE,UAAU,EAAE,IAAI,EAAE,MAAM,EAAE,GAAG,OAAO,CAAC,MAAM,CAAC,CAwNvF"}

package/dist/commands/setup.js

@@ -44,6 +44,7 @@ Object.defineProperty(exports, "__esModule", { value: true });
 exports.setupCommand = setupCommand;
 const fs = __importStar(require("node:fs"));
 const path = __importStar(require("node:path"));
+const node_crypto_1 = require("node:crypto");
 const index_1 = require("../index");
 const index_2 = require("../index");
 const init_1 = require("./init");
@@ -97,6 +98,9 @@ async function setupCommand(options, args) {
     const ciMode = getFlag(args, '--ci');
     const presetFlag = getFlag(args, '--preset');
     const detectOnly = args.includes('--detect-only');
+    const explicitForce = args.includes('--force');
+    const force = options.yes || explicitForce;
+    const noDependencySync = args.includes('--no-dependency-sync');
     if (ciMode && ciMode !== 'github') {
         throw new index_1.CLIError(`Unsupported CI target: ${ciMode}. Supported: github`);
     }
@@ -139,7 +143,15 @@ async function setupCommand(options, args) {
         }
         return index_2.EXIT_CODE.SUCCESS;
     }
-    const initResult = (0, init_1.initializeCharter)(options.configPath, options.yes || args.includes('--force'), {
+    const baselinePath = path.join(options.configPath, 'config.json');
+    const configHashBefore = hashFileIfExists(baselinePath);
+    const baselinePlan = planBaselineMutation(baselinePath, explicitForce);
+    const workflowPath = path.join('.github', 'workflows', 'charter-governance.yml');
+    const workflowPlan = ciMode === 'github'
+        ? planManagedFile(workflowPath, getGithubWorkflow())
+        : { action: 'skip' };
+    const manifestPlan = syncPackageManifest(selectedPreset, !noDependencySync, false);
+    const initResult = (0, init_1.initializeCharter)(options.configPath, explicitForce, {
         preset: selectedPreset,
         projectName: inferProjectName(contexts),
         features: {
@@ -149,6 +161,12 @@ async function setupCommand(options, args) {
             vite: detection.signals.hasVite,
         },
     });
+    const configHashAfter = hashFileIfExists(baselinePath);
+    const baselineAppliedAction = !configHashBefore && !!configHashAfter
+        ? 'create'
+        : configHashBefore !== configHashAfter
+            ? 'update'
+            : 'noop';
     const result = {
         configPath: options.configPath,
         initialized: initResult.created,
@@ -168,20 +186,64 @@ async function setupCommand(options, args) {
             added: [],
             updatedEntries: [],
         },
+        mutationPlan: {
+            baseline: {
+                action: baselinePlan.action,
+                path: baselinePath.replace(/\\/g, '/'),
+                configHashBefore: configHashBefore || undefined,
+                configHashAfter: configHashBefore || undefined,
+                writesPerformed: 0,
+            },
+            workflow: {
+                action: workflowPlan.action,
+                path: ciMode === 'github' ? workflowPath.replace(/\\/g, '/') : undefined,
+            },
+            scripts: manifestPlan.report.scripts,
+            dependencies: manifestPlan.report.dependencies,
+        },
+        appliedMutations: {
+            baseline: {
+                action: baselineAppliedAction,
+                path: baselinePath.replace(/\\/g, '/'),
+                configHashBefore: configHashBefore || undefined,
+                configHashAfter: configHashAfter || undefined,
+                writesPerformed: initResult.writesPerformed,
+            },
+            workflow: {
+                action: 'skip',
+            },
+            scripts: {
+                action: 'skip',
+                add: [],
+                update: [],
+            },
+            dependencies: {
+                action: 'skip',
+                add: [],
+                update: [],
+                skipped: noDependencySync,
+                reason: noDependencySync ? '--no-dependency-sync' : undefined,
+            },
+        },
     };
     if (ciMode === 'github') {
-        const workflowPath = path.join('.github', 'workflows', 'charter-governance.yml');
-        const workflowWrite = writeManagedFile(workflowPath, getGithubWorkflow(), options.yes || args.includes('--force'));
+        const workflowWrite = applyManagedFile(workflowPath, getGithubWorkflow(), force);
         result.workflow = {
             mode: 'github',
             path: workflowPath,
             created: workflowWrite.created,
             updated: workflowWrite.updated,
         };
+        result.appliedMutations.workflow = {
+            action: workflowWrite.created ? 'create' : workflowWrite.updated ? 'update' : 'noop',
+            path: workflowPath.replace(/\\/g, '/'),
+        };
     }
-    const manifest = upsertPackageManifest(selectedPreset);
-    result.scripts = manifest.scripts;
-    result.dependencies = manifest.dependencies;
+    const manifestApplied = syncPackageManifest(selectedPreset, !noDependencySync, true);
+    result.scripts = manifestApplied.legacy.scripts;
+    result.dependencies = manifestApplied.legacy.dependencies;
+    result.appliedMutations.scripts = manifestApplied.report.scripts;
+    result.appliedMutations.dependencies = manifestApplied.report.dependencies;
     if (options.format === 'json') {
         console.log(JSON.stringify(result, null, 2));
         return index_2.EXIT_CODE.SUCCESS;
@@ -216,6 +278,9 @@ async function setupCommand(options, args) {
         const updated = result.dependencies.updatedEntries.length > 0 ? `updated [${result.dependencies.updatedEntries.join(', ')}]` : '';
         console.log(`  Package dependencies synced: ${[added, updated].filter(Boolean).join('; ')} (${result.dependencies.packageJsonPath})`);
     }
+    else if (result.dependencies.skipped) {
+        console.log(`  Package dependency sync skipped: ${result.dependencies.reason}`);
+    }
     console.log('');
     console.log('  What this gives you immediately:');
     console.log('    - Merge-time checks for risky changes without governance links');
@@ -432,7 +497,37 @@ function hasAnyPath(paths) {
 function pick(set, candidates) {
     return candidates.filter((c) => set.has(c));
 }
-function writeManagedFile(targetPath, content, force) {
+function planBaselineMutation(configFilePath, force) {
+    const exists = fs.existsSync(path.resolve(configFilePath));
+    if (!exists) {
+        return { action: 'create' };
+    }
+    if (force) {
+        return { action: 'update' };
+    }
+    return { action: 'noop' };
+}
+function hashFileIfExists(targetPath) {
+    const absolute = path.resolve(targetPath);
+    if (!fs.existsSync(absolute)) {
+        return null;
+    }
+    const content = fs.readFileSync(absolute);
+    return (0, node_crypto_1.createHash)('sha256').update(content).digest('hex');
+}
+function planManagedFile(targetPath, content) {
+    const absolute = path.resolve(targetPath);
+    const exists = fs.existsSync(absolute);
+    if (!exists) {
+        return { action: 'create' };
+    }
+    const current = fs.readFileSync(absolute, 'utf-8');
+    if (current === content) {
+        return { action: 'noop' };
+    }
+    return { action: 'update' };
+}
+function applyManagedFile(targetPath, content, force) {
     const absolute = path.resolve(targetPath);
     const exists = fs.existsSync(absolute);
     if (!exists) {
@@ -460,12 +555,24 @@ function getFlag(args, flag) {
 function isValidPreset(value) {
     return value === 'worker' || value === 'frontend' || value === 'backend' || value === 'fullstack';
 }
-function upsertPackageManifest(selectedPreset) {
+function syncPackageManifest(selectedPreset, syncDependencies, apply) {
     const packageJsonPath = path.resolve('package.json');
     if (!fs.existsSync(packageJsonPath)) {
         return {
-            scripts: { updated: false, added: [], updatedEntries: [] },
-            dependencies: { updated: false, added: [], updatedEntries: [] },
+            report: {
+                scripts: { action: 'skip', add: [], update: [] },
+                dependencies: {
+                    action: 'skip',
+                    add: [],
+                    update: [],
+                    skipped: !syncDependencies,
+                    reason: !syncDependencies ? '--no-dependency-sync' : 'package.json not found',
+                },
+            },
+            legacy: {
+                scripts: { updated: false, added: [], updatedEntries: [] },
+                dependencies: { updated: false, added: [], updatedEntries: [], skipped: !syncDependencies, reason: !syncDependencies ? '--no-dependency-sync' : 'package.json not found' },
+            },
         };
     }
     try {
@@ -496,52 +603,76 @@ function upsertPackageManifest(selectedPreset) {
             scripts['charter:setup'] = setupCommand;
             updatedEntries.push('charter:setup');
         }
-        if (!devDependencies['@stackbilt/cli']) {
-            devDependencies['@stackbilt/cli'] = pinnedCliVersion;
-            depAdded.push('@stackbilt/cli');
+        if (syncDependencies) {
+            if (!devDependencies['@stackbilt/cli']) {
+                devDependencies['@stackbilt/cli'] = pinnedCliVersion;
+                depAdded.push('@stackbilt/cli');
+            }
+            else if (devDependencies['@stackbilt/cli'] !== pinnedCliVersion) {
+                devDependencies['@stackbilt/cli'] = pinnedCliVersion;
+                depUpdated.push('@stackbilt/cli');
+            }
         }
-        else if (devDependencies['@stackbilt/cli'] !== pinnedCliVersion) {
-            devDependencies['@stackbilt/cli'] = pinnedCliVersion;
-            depUpdated.push('@stackbilt/cli');
+        const scriptsChanged = added.length > 0 || updatedEntries.length > 0;
+        const depsChanged = depAdded.length > 0 || depUpdated.length > 0;
+        if (apply && (scriptsChanged || (syncDependencies && depsChanged))) {
+            parsed.scripts = scripts;
+            if (syncDependencies) {
+                parsed.devDependencies = devDependencies;
+            }
+            fs.writeFileSync(packageJsonPath, JSON.stringify(parsed, null, 2) + '\n');
         }
-        if (added.length === 0 && updatedEntries.length === 0 && depAdded.length === 0 && depUpdated.length === 0) {
-            return {
+        return {
+            report: {
+                scripts: {
+                    action: scriptsChanged ? (added.length > 0 ? 'create' : 'update') : 'noop',
+                    path: 'package.json',
+                    add: added,
+                    update: updatedEntries,
+                },
+                dependencies: {
+                    action: !syncDependencies ? 'skip' : depsChanged ? (depAdded.length > 0 ? 'create' : 'update') : 'noop',
+                    path: 'package.json',
+                    add: depAdded,
+                    update: depUpdated,
+                    skipped: !syncDependencies,
+                    reason: !syncDependencies ? '--no-dependency-sync' : undefined,
+                },
+            },
+            legacy: {
                 scripts: {
                     packageJsonPath: 'package.json',
-                    updated: false,
-                    added: [],
-                    updatedEntries: [],
+                    updated: scriptsChanged,
+                    added,
+                    updatedEntries,
                 },
                 dependencies: {
                     packageJsonPath: 'package.json',
-                    updated: false,
-                    added: [],
-                    updatedEntries: [],
+                    updated: syncDependencies ? depsChanged : false,
+                    added: depAdded,
+                    updatedEntries: depUpdated,
+                    skipped: !syncDependencies,
+                    reason: !syncDependencies ? '--no-dependency-sync' : undefined,
                 },
-            };
-        }
-        parsed.scripts = scripts;
-        parsed.devDependencies = devDependencies;
-        fs.writeFileSync(packageJsonPath, JSON.stringify(parsed, null, 2) + '\n');
-        return {
-            scripts: {
-                packageJsonPath: 'package.json',
-                updated: added.length > 0 || updatedEntries.length > 0,
-                added,
-                updatedEntries,
-            },
-            dependencies: {
-                packageJsonPath: 'package.json',
-                updated: depAdded.length > 0 || depUpdated.length > 0,
-                added: depAdded,
-                updatedEntries: depUpdated,
             },
         };
     }
     catch {
         return {
-            scripts: { updated: false, added: [], updatedEntries: [] },
-            dependencies: { updated: false, added: [], updatedEntries: [] },
+            report: {
+                scripts: { action: 'skip', add: [], update: [] },
+                dependencies: {
+                    action: 'skip',
+                    add: [],
+                    update: [],
+                    skipped: !syncDependencies,
+                    reason: 'package.json parse/write failed',
+                },
+            },
+            legacy: {
+                scripts: { updated: false, added: [], updatedEntries: [] },
+                dependencies: { updated: false, added: [], updatedEntries: [], skipped: !syncDependencies, reason: 'package.json parse/write failed' },
+            },
         };
     }
 }

package/dist/commands/setup.js.map

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package/dist/commands/validate.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"validate.d.ts","sourceRoot":"","sources":["../../src/commands/validate.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAGH,OAAO,KAAK,EAAE,UAAU,EAAE,MAAM,UAAU,CAAC;AAoC3C,wBAAsB,eAAe,CAAC,OAAO,EAAE,UAAU,EAAE,IAAI,EAAE,MAAM,EAAE,GAAG,OAAO,CAAC,MAAM,CAAC,CAwD1F"}
+{"version":3,"file":"validate.d.ts","sourceRoot":"","sources":["../../src/commands/validate.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAGH,OAAO,KAAK,EAAE,UAAU,EAAE,MAAM,UAAU,CAAC;AA8C3C,wBAAsB,eAAe,CAAC,OAAO,EAAE,UAAU,EAAE,IAAI,EAAE,MAAM,EAAE,GAAG,OAAO,CAAC,MAAM,CAAC,CAwD1F"}

package/dist/commands/validate.js

@@ -136,20 +136,46 @@ function validateCommits(commits, commitRange, threshold, policy) {
         commits: commits.length,
         trailersFound: totalTrailers,
         highRiskUnlinked,
+        strictTrailerMode: {
+            active: policy.requireTrailers && totalTrailers === 0,
+            mode: policy.requireTrailers && totalTrailers === 0
+                ? (unlinked.length > 0 ? 'STRICT_AND_RISK' : 'STRICT_ONLY')
+                : (unlinked.length > 0 ? 'RISK_ONLY' : 'NONE'),
+            reason: policy.requireTrailers && totalTrailers === 0
+                ? `requireTrailers=true and no trailers found in range (${policy.citationStrictness}).`
+                : 'strict trailer mode not triggered',
+        },
         suggestions,
         evidence: {
-            offendingCommits: buildOffendingCommits(commits, totalTrailers === 0, unlinked, threshold),
+            policyOffenders: buildPolicyOffenders(commits, policy.requireTrailers && totalTrailers === 0),
+            riskOffenders: buildRiskOffenders(commits, unlinked, threshold),
         },
     };
 }
-function buildOffendingCommits(commits, noTrailersFound, thresholdUnlinked, threshold) {
+function buildPolicyOffenders(commits, strictModeActive) {
+    if (!strictModeActive)
+        return [];
+    return commits.map((commit) => {
+        const filesChanged = commit.files_changed || [];
+        const subject = commit.message.split('\n')[0].slice(0, 200);
+        return {
+            classification: 'policy',
+            policyContextOnly: true,
+            sha: commit.sha,
+            shortSha: commit.sha.slice(0, 7),
+            subject,
+            riskReason: 'Missing required governance trailers under strict trailer mode.',
+            missingTrailers: ['Governed-By', 'Resolves-Request'],
+            filesChangedCount: filesChanged.length,
+        };
+    });
+}
+function buildRiskOffenders(commits, thresholdUnlinked, threshold) {
     const thresholdMap = new Map();
     for (const item of thresholdUnlinked) {
         thresholdMap.set(item.sha, item);
     }
-    const targetCommits = noTrailersFound
-        ? commits
-        : commits.filter((commit) => thresholdMap.has(commit.sha));
+    const targetCommits = commits.filter((commit) => thresholdMap.has(commit.sha));
     return targetCommits.map((commit) => {
         const thresholdHit = thresholdMap.get(commit.sha);
         const filesChanged = commit.files_changed || [];
@@ -157,6 +183,7 @@ function buildOffendingCommits(commits, noTrailersFound, thresholdUnlinked, thre
         const riskMeta = getRiskMeta(filesChanged, subject);
         const riskLevel = thresholdHit?.risk || (0, git_2.assessCommitRisk)(filesChanged, subject);
         return {
+            classification: 'risk',
             sha: commit.sha,
             shortSha: commit.sha.slice(0, 7),
             subject,
@@ -238,11 +265,19 @@ function printResult(result) {
             console.log(`    - ${s}`);
         }
     }
-    if (result.evidence.offendingCommits.length > 0) {
+    if (result.evidence.policyOffenders.length > 0) {
+        console.log('');
+        console.log('  Policy offenders (strict trailer mode):');
+        for (const commit of result.evidence.policyOffenders.slice(0, 10)) {
+            console.log(`    - ${commit.shortSha} ${commit.subject}`);
+            console.log(`      Reason: ${commit.riskReason}`);
+        }
+    }
+    if (result.evidence.riskOffenders.length > 0) {
         console.log('');
-        console.log('  Offending commits:');
-        for (const commit of result.evidence.offendingCommits.slice(0, 10)) {
-            console.log(`    - ${commit.shortSha} [${commit.riskLevel}] ${commit.subject}`);
+        console.log('  Risk offenders (threshold-driven):');
+        for (const commit of result.evidence.riskOffenders.slice(0, 10)) {
+            console.log(`    - ${commit.shortSha} [${commit.riskLevel || 'N/A'}] ${commit.subject}`);
             console.log(`      Reason: ${commit.riskReason}`);
         }
     }

package/dist/commands/validate.js.map

@@ -1 +1 @@
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package/dist/index.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AA2CH,eAAO,MAAM,SAAS;;;;CAIZ,CAAC;AAEX,qBAAa,QAAS,SAAQ,KAAK;aAGf,QAAQ,EAAE,MAAM;gBADhC,OAAO,EAAE,MAAM,EACC,QAAQ,GAAE,MAAgC;CAK7D;AAED,MAAM,WAAW,UAAU;IACzB,UAAU,EAAE,MAAM,CAAC;IACnB,MAAM,EAAE,MAAM,GAAG,MAAM,CAAC;IACxB,MAAM,EAAE,OAAO,CAAC;IAChB,GAAG,EAAE,OAAO,CAAC;CACd;AAED,wBAAsB,GAAG,CAAC,IAAI,EAAE,MAAM,EAAE,GAAG,OAAO,CAAC,MAAM,CAAC,CAkDzD"}
+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AA6CH,eAAO,MAAM,SAAS;;;;CAIZ,CAAC;AAEX,qBAAa,QAAS,SAAQ,KAAK;aAGf,QAAQ,EAAE,MAAM;gBADhC,OAAO,EAAE,MAAM,EACC,QAAQ,GAAE,MAAgC;CAK7D;AAED,MAAM,WAAW,UAAU;IACzB,UAAU,EAAE,MAAM,CAAC;IACnB,MAAM,EAAE,MAAM,GAAG,MAAM,CAAC;IACxB,MAAM,EAAE,OAAO,CAAC;IAChB,GAAG,EAAE,OAAO,CAAC;CACd;AAED,wBAAsB,GAAG,CAAC,IAAI,EAAE,MAAM,EAAE,GAAG,OAAO,CAAC,MAAM,CAAC,CAkDzD"}

package/dist/index.js

@@ -26,7 +26,7 @@ charter - repo-level governance toolkit
 
 Usage:
   charter                          Show immediate governance value + risk snapshot
-  charter setup [--ci github] [--preset <worker|frontend|backend|fullstack>] [--detect-only]
+  charter setup [--ci github] [--preset <worker|frontend|backend|fullstack>] [--detect-only] [--no-dependency-sync]
                                    Bootstrap .charter/ and optional CI workflow
   charter init [--preset <worker|frontend|backend|fullstack>]
                                    Scaffold .charter/ config directory
@@ -48,6 +48,8 @@ Options:
   --yes              Auto-accept safe setup overwrites
   --preset <name>    Stack preset: worker, frontend, backend, fullstack
   --detect-only      Setup only: print detected stack/preset and exit
+  --no-dependency-sync
+                     Setup only: do not rewrite devDependencies["@stackbilt/cli"]
 `;
 exports.EXIT_CODE = {
     SUCCESS: 0,

package/dist/index.js.map

@@ -1 +1 @@
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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@stackbilt/cli",
-  "version": "0.1.16",
+  "version": "0.1.18",
   "description": "Charter CLI — repo-level governance checks",
   "bin": {
     "charter": "./dist/bin.js"