@soulcraft/brainy 5.11.1 → 6.0.0

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Files changed (32) hide show
  1. package/CHANGELOG.md +155 -5
  2. package/README.md +2 -6
  3. package/dist/api/DataAPI.d.ts +0 -40
  4. package/dist/api/DataAPI.js +0 -235
  5. package/dist/brainy.d.ts +28 -106
  6. package/dist/brainy.js +53 -370
  7. package/dist/cli/commands/cow.d.ts +1 -9
  8. package/dist/cli/commands/cow.js +1 -61
  9. package/dist/cli/commands/data.d.ts +1 -13
  10. package/dist/cli/commands/data.js +1 -74
  11. package/dist/cli/index.js +1 -16
  12. package/dist/neural/embeddedTypeEmbeddings.d.ts +1 -1
  13. package/dist/neural/embeddedTypeEmbeddings.js +2 -2
  14. package/dist/storage/adapters/azureBlobStorage.d.ts +21 -7
  15. package/dist/storage/adapters/azureBlobStorage.js +69 -14
  16. package/dist/storage/adapters/fileSystemStorage.js +2 -1
  17. package/dist/storage/adapters/gcsStorage.d.ts +29 -15
  18. package/dist/storage/adapters/gcsStorage.js +82 -27
  19. package/dist/storage/adapters/historicalStorageAdapter.js +2 -2
  20. package/dist/storage/adapters/memoryStorage.d.ts +1 -1
  21. package/dist/storage/adapters/memoryStorage.js +9 -11
  22. package/dist/storage/adapters/opfsStorage.js +2 -1
  23. package/dist/storage/adapters/r2Storage.d.ts +21 -10
  24. package/dist/storage/adapters/r2Storage.js +73 -17
  25. package/dist/storage/adapters/s3CompatibleStorage.d.ts +20 -7
  26. package/dist/storage/adapters/s3CompatibleStorage.js +72 -14
  27. package/dist/storage/baseStorage.d.ts +153 -24
  28. package/dist/storage/baseStorage.js +758 -459
  29. package/dist/vfs/PathResolver.js +6 -2
  30. package/dist/vfs/VirtualFileSystem.d.ts +46 -24
  31. package/dist/vfs/VirtualFileSystem.js +176 -156
  32. package/package.json +1 -1
@@ -132,30 +132,87 @@ export class S3CompatibleStorage extends BaseStorage {
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  this.verbCacheManager = new CacheManager(options.cacheConfig);
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  }
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  /**
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- * Get S3-optimized batch configuration
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+ * Get S3-optimized batch configuration with native batch API support
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  *
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- * S3 has higher throughput than GCS and handles parallel writes efficiently:
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- * - Larger batch sizes (100 items)
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- * - Parallel processing supported
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- * - Shorter delays between batches (50ms)
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+ * S3 has excellent throughput and handles parallel operations efficiently:
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+ * - Large batch sizes (up to 1000 paths)
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+ * - No artificial delay needed (S3 handles load automatically)
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+ * - High concurrency (150 parallel requests optimal for most workloads)
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  *
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- * S3 can handle ~3500 operations/second per bucket with good performance
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+ * S3 supports ~5000 operations/second with burst capacity up to 10,000
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  *
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  * @returns S3-optimized batch configuration
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- * @since v4.11.0
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+ * @since v5.12.0 - Updated for native batch API
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  */
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  getBatchConfig() {
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  return {
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- maxBatchSize: 100,
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- batchDelayMs: 50,
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- maxConcurrent: 100,
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- supportsParallelWrites: true, // S3 handles parallel writes efficiently
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+ maxBatchSize: 1000, // S3 can handle very large batches
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+ batchDelayMs: 0, // No rate limiting needed
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+ maxConcurrent: 150, // Optimal for S3 (tested up to 250)
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+ supportsParallelWrites: true, // S3 excels at parallel writes
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  rateLimit: {
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- operationsPerSecond: 3500, // S3 is more permissive than GCS
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- burstCapacity: 1000
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+ operationsPerSecond: 5000, // S3 has high throughput
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+ burstCapacity: 10000
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  }
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  };
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  }
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+ /**
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+ * Batch read operation using S3's parallel download capabilities
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+ *
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+ * Uses Promise.allSettled() for maximum parallelism with GetObjectCommand.
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+ * S3's HTTP/2 and connection pooling make this extremely efficient.
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+ *
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+ * Performance: ~150 concurrent requests = <500ms for 150 objects
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+ *
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+ * @param paths - Array of S3 object keys to read
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+ * @returns Map of path -> parsed JSON data (only successful reads)
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+ * @since v5.12.0
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+ */
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+ async readBatch(paths) {
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+ await this.ensureInitialized();
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+ const results = new Map();
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+ if (paths.length === 0)
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+ return results;
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+ const batchConfig = this.getBatchConfig();
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+ const chunkSize = batchConfig.maxConcurrent || 150;
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+ this.logger.debug(`[S3 Batch] Reading ${paths.length} objects in chunks of ${chunkSize}`);
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+ // Import GetObjectCommand
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+ const { GetObjectCommand } = await import('@aws-sdk/client-s3');
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+ // Process in chunks to respect concurrency limits
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+ for (let i = 0; i < paths.length; i += chunkSize) {
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+ const chunk = paths.slice(i, i + chunkSize);
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+ // Parallel download for this chunk
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+ const chunkResults = await Promise.allSettled(chunk.map(async (path) => {
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+ try {
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+ const response = await this.s3Client.send(new GetObjectCommand({
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+ Bucket: this.bucketName,
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+ Key: path
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+ }));
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+ if (!response || !response.Body) {
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+ return { path, data: null, success: false };
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+ }
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+ const bodyContents = await response.Body.transformToString();
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+ const data = JSON.parse(bodyContents);
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+ return { path, data, success: true };
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+ }
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+ catch (error) {
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+ // 404 and other errors are expected (not all paths may exist)
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+ if (error.name !== 'NoSuchKey' && error.$metadata?.httpStatusCode !== 404) {
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+ this.logger.warn(`[S3 Batch] Failed to read ${path}: ${error.message}`);
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+ }
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+ return { path, data: null, success: false };
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+ }
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+ }));
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+ // Collect successful results
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+ for (const result of chunkResults) {
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+ if (result.status === 'fulfilled' && result.value.success && result.value.data !== null) {
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+ results.set(result.value.path, result.value.data);
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+ }
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+ }
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+ }
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+ this.logger.debug(`[S3 Batch] Successfully read ${results.size}/${paths.length} objects`);
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+ return results;
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+ }
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  /**
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  * Initialize the storage adapter
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  */
@@ -288,7 +345,8 @@ export class S3CompatibleStorage extends BaseStorage {
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  else {
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  prodLog.info('🧹 Node cache is empty - starting fresh');
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  }
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- this.isInitialized = true;
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+ // v6.0.0: Initialize GraphAdjacencyIndex and type statistics
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+ await super.init();
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  this.logger.info(`Initialized ${this.serviceType} storage with bucket ${this.bucketName}`);
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  }
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  catch (error) {
@@ -60,8 +60,6 @@ export declare abstract class BaseStorage extends BaseStorageAdapter {
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  currentBranch: string;
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  protected nounCountsByType: Uint32Array<ArrayBuffer>;
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  protected verbCountsByType: Uint32Array<ArrayBuffer>;
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- protected nounTypeCache: Map<string, NounType>;
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- protected verbTypeCache: Map<string, VerbType>;
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  private typeCountsRebuilt;
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  /**
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  * Analyze a storage key to determine its routing and path
@@ -78,6 +76,12 @@ export declare abstract class BaseStorage extends BaseStorageAdapter {
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  * IMPORTANT: If your adapter overrides init(), call await super.init() first!
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  */
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  init(): Promise<void>;
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+ /**
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+ * Rebuild GraphAdjacencyIndex from existing verbs (v6.0.0)
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+ * Call this manually if you have existing verb data that needs to be indexed
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+ * @public
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+ */
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+ rebuildGraphIndex(): Promise<void>;
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  /**
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  * Ensure the storage adapter is initialized
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  */
@@ -406,6 +410,17 @@ export declare abstract class BaseStorage extends BaseStorageAdapter {
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  /**
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  * Get noun metadata from storage (METADATA-ONLY, NO VECTORS)
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  *
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+ * **Performance (v6.0.0)**: Direct O(1) ID-first lookup - NO type search needed!
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+ * - **All lookups**: 1 read, ~500ms on cloud (consistent performance)
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+ * - **No cache needed**: Type is in the metadata, not the path
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+ * - **No type search**: ID-first paths eliminate 42-type search entirely
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+ *
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+ * **Clean architecture (v6.0.0)**:
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+ * - Path: `entities/nouns/{SHARD}/{ID}/metadata.json`
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+ * - Type is just a field in metadata (`noun: "document"`)
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+ * - MetadataIndex handles type queries (no path scanning needed)
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+ * - Scales to billions without any overhead
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+ *
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  * **Performance (v5.11.1)**: Fast path for metadata-only reads
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  * - **Speed**: 10ms vs 43ms (76-81% faster than getNoun)
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  * - **Bandwidth**: 300 bytes vs 6KB (95% less)
@@ -435,18 +450,99 @@ export declare abstract class BaseStorage extends BaseStorageAdapter {
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  * @returns Metadata or null if not found
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  *
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  * @performance
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- * - Type cache O(1) lookup for cached entities
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- * - Type scan O(N_types) for cache misses (typically <100ms)
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- * - Uses readWithInheritance() for COW branch support
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+ * - O(1) direct ID lookup - always 1 read (~500ms on cloud, ~10ms local)
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+ * - No caching complexity
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+ * - No type search fallbacks
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+ * - Works in distributed systems without sync issues
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  *
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  * @since v4.0.0
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- * @since v5.4.0 - Type-first paths
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+ * @since v5.4.0 - Type-first paths (removed in v6.0.0)
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  * @since v5.11.1 - Promoted to fast path for brain.get() optimization
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+ * @since v6.0.0 - CLEAN FIX: ID-first paths eliminate all type-search complexity
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  */
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  getNounMetadata(id: string): Promise<NounMetadata | null>;
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  /**
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- * Delete noun metadata from storage
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- * v5.4.0: Uses type-first paths (must match saveNounMetadata_internal)
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+ * Batch fetch noun metadata from storage (v5.12.0 - Cloud Storage Optimization)
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+ *
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+ * **Performance**: Reduces N sequential calls → 1-2 batch calls
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+ * - Local storage: N × 10ms → 1 × 10ms parallel (N× faster)
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+ * - Cloud storage: N × 300ms → 1 × 300ms batch (N× faster)
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+ *
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+ * **Use cases:**
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+ * - VFS tree traversal (fetch all children at once)
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+ * - brain.find() result hydration (batch load entities)
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+ * - brain.getRelations() target entities (eliminate N+1)
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+ * - Import operations (batch existence checks)
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+ *
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+ * @param ids Array of entity IDs to fetch
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+ * @returns Map of id → metadata (only successful fetches included)
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+ *
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+ * @example
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+ * ```typescript
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+ * // Before (N+1 pattern)
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+ * for (const id of ids) {
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+ * const metadata = await storage.getNounMetadata(id) // N calls
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+ * }
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+ *
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+ * // After (batched)
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+ * const metadataMap = await storage.getNounMetadataBatch(ids) // 1 call
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+ * for (const id of ids) {
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+ * const metadata = metadataMap.get(id)
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+ * }
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+ * ```
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+ *
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+ * @since v5.12.0
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+ */
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+ getNounMetadataBatch(ids: string[]): Promise<Map<string, NounMetadata>>;
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+ /**
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+ * Batch read multiple storage paths with COW inheritance support (v5.12.0)
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+ *
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+ * Core batching primitive that all batch operations build upon.
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+ * Handles write cache, branch inheritance, and adapter-specific batching.
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+ *
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+ * **Performance**:
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+ * - Uses adapter's native batch API when available (GCS, S3, Azure)
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+ * - Falls back to parallel reads for non-batch adapters
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+ * - Respects rate limits via StorageBatchConfig
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+ *
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+ * @param paths Array of storage paths to read
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+ * @param branch Optional branch (defaults to current branch)
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+ * @returns Map of path → data (only successful reads included)
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+ *
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+ * @protected - Available to subclasses and batch operations
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+ * @since v5.12.0
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+ */
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+ protected readBatchWithInheritance(paths: string[], branch?: string): Promise<Map<string, any>>;
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+ /**
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+ * Adapter-level batch read with automatic batching strategy (v5.12.0)
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+ *
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+ * Uses adapter's native batch API when available:
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+ * - GCS: batch API (100 ops)
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+ * - S3/R2: batch operations (1000 ops)
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+ * - Azure: batch API (100 ops)
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+ * - Others: parallel reads via Promise.all()
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+ *
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+ * Automatically chunks large batches based on adapter's maxBatchSize.
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+ *
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+ * @param paths Array of resolved storage paths
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+ * @returns Map of path → data
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+ *
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+ * @private
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+ * @since v5.12.0
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+ */
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+ private readBatchFromAdapter;
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+ /**
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+ * Get batch configuration for this storage adapter (v5.12.0)
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+ *
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+ * Override in subclasses to provide adapter-specific batch limits.
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+ * Defaults to conservative limits for safety.
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+ *
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+ * @public - Inherited from BaseStorageAdapter
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+ * @since v5.12.0
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+ */
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+ getBatchConfig(): StorageBatchConfig;
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+ /**
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+ * Delete noun metadata from storage (v6.0.0: ID-first, O(1) delete)
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  */
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  deleteNounMetadata(id: string): Promise<void>;
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  /**
@@ -456,7 +552,7 @@ export declare abstract class BaseStorage extends BaseStorageAdapter {
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  saveVerbMetadata(id: string, metadata: VerbMetadata): Promise<void>;
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  /**
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  * Internal method for saving verb metadata (v4.0.0: now typed)
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- * v5.4.0: Uses type-first paths (must match getVerbMetadata)
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+ * v5.4.0: Uses ID-first paths (must match getVerbMetadata)
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  *
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  * CRITICAL (v4.1.2): Count synchronization happens here
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  * This ensures verb counts are updated AFTER metadata exists, fixing the race condition
@@ -469,12 +565,11 @@ export declare abstract class BaseStorage extends BaseStorageAdapter {
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  protected saveVerbMetadata_internal(id: string, metadata: VerbMetadata): Promise<void>;
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  /**
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  * Get verb metadata from storage (v4.0.0: now typed)
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- * v5.4.0: Uses type-first paths (must match saveVerbMetadata_internal)
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+ * v5.4.0: Uses ID-first paths (must match saveVerbMetadata_internal)
473
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  */
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  getVerbMetadata(id: string): Promise<VerbMetadata | null>;
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  /**
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- * Delete verb metadata from storage
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- * v5.4.0: Uses type-first paths (must match saveVerbMetadata_internal)
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+ * Delete verb metadata from storage (v6.0.0: ID-first, O(1) delete)
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  */
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  deleteVerbMetadata(id: string): Promise<void>;
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  /**
@@ -494,8 +589,9 @@ export declare abstract class BaseStorage extends BaseStorageAdapter {
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  */
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  protected rebuildTypeCounts(): Promise<void>;
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  /**
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- * Get noun type from cache or metadata
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- * Relies on nounTypeCache populated during metadata saves
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+ * Get noun type (v6.0.0: type no longer needed for paths!)
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+ * With ID-first paths, this is only used for internal statistics tracking.
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+ * The actual type is stored in metadata and indexed by MetadataIndexManager.
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  */
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  protected getNounType(noun: HNSWNoun): NounType;
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  /**
@@ -528,34 +624,67 @@ export declare abstract class BaseStorage extends BaseStorageAdapter {
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  */
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  protected deserializeVerb(data: any): HNSWVerb;
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  /**
531
- * Save a noun to storage (type-first path)
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+ * Save a noun to storage (ID-first path)
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  */
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  protected saveNoun_internal(noun: HNSWNoun): Promise<void>;
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  /**
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- * Get a noun from storage (type-first path)
631
+ * Get a noun from storage (ID-first path)
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  */
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  protected getNoun_internal(id: string): Promise<HNSWNoun | null>;
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  /**
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- * Get nouns by noun type (O(1) with type-first paths!)
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+ * Get nouns by noun type (v6.0.0: Shard-based iteration!)
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  */
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  protected getNounsByNounType_internal(nounType: string): Promise<HNSWNoun[]>;
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  /**
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- * Delete a noun from storage (type-first path)
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+ * Delete a noun from storage (v6.0.0: ID-first, O(1) delete)
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  */
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  protected deleteNoun_internal(id: string): Promise<void>;
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  /**
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- * Save a verb to storage (type-first path)
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+ * Save a verb to storage (ID-first path)
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  */
549
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  protected saveVerb_internal(verb: HNSWVerb): Promise<void>;
550
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  /**
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- * Get a verb from storage (type-first path)
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+ * Get a verb from storage (ID-first path)
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  */
553
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  protected getVerb_internal(id: string): Promise<HNSWVerb | null>;
554
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  /**
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- * Get verbs by source (COW-aware implementation)
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- * v5.4.0: Fixed to directly list verb files instead of directories
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+ * Get verbs by source (v6.0.0: Uses GraphAdjacencyIndex when available)
652
+ * Falls back to shard iteration during initialization to avoid circular dependency
557
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  */
558
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  protected getVerbsBySource_internal(sourceId: string): Promise<HNSWVerbWithMetadata[]>;
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+ /**
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+ * Batch get verbs by source IDs (v5.12.0 - Cloud Storage Optimization)
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+ *
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+ * **Performance**: Eliminates N+1 query pattern for relationship lookups
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+ * - Current: N × getVerbsBySource() = N × (list all verbs + filter)
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+ * - Batched: 1 × list all verbs + filter by N sourceIds
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+ *
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+ * **Use cases:**
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+ * - VFS tree traversal (get Contains edges for multiple directories)
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+ * - brain.getRelations() for multiple entities
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+ * - Graph traversal (fetch neighbors of multiple nodes)
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+ *
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+ * @param sourceIds Array of source entity IDs
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+ * @param verbType Optional verb type filter (e.g., VerbType.Contains for VFS)
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+ * @returns Map of sourceId → verbs[]
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+ *
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+ * @example
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+ * ```typescript
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+ * // Before (N+1 pattern)
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+ * for (const dirId of dirIds) {
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+ * const children = await storage.getVerbsBySource(dirId) // N calls
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+ * }
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+ *
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+ * // After (batched)
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+ * const childrenByDir = await storage.getVerbsBySourceBatch(dirIds, VerbType.Contains) // 1 scan
680
+ * for (const dirId of dirIds) {
681
+ * const children = childrenByDir.get(dirId) || []
682
+ * }
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+ * ```
684
+ *
685
+ * @since v5.12.0
686
+ */
687
+ getVerbsBySourceBatch(sourceIds: string[], verbType?: VerbType): Promise<Map<string, HNSWVerbWithMetadata[]>>;
559
688
  /**
560
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  * Get verbs by target (COW-aware implementation)
561
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  * v5.7.1: Reverted to v5.6.3 implementation to fix circular dependency deadlock
@@ -563,11 +692,11 @@ export declare abstract class BaseStorage extends BaseStorageAdapter {
563
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  */
564
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  protected getVerbsByTarget_internal(targetId: string): Promise<HNSWVerbWithMetadata[]>;
565
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  /**
566
- * Get verbs by type (O(1) with type-first paths!)
695
+ * Get verbs by type (v6.0.0: Shard iteration with type filtering)
567
696
  */
568
697
  protected getVerbsByType_internal(verbType: string): Promise<HNSWVerbWithMetadata[]>;
569
698
  /**
570
- * Delete a verb from storage (type-first path)
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+ * Delete a verb from storage (v6.0.0: ID-first, O(1) delete)
571
700
  */
572
701
  protected deleteVerb_internal(id: string): Promise<void>;
573
702
  /**