@sme.up/ketchup2 2.2.0 → 2.4.0

package/dist/{cose-bilkent-S5V4N54A-B30Rh9DR.js → cose-bilkent-S5V4N54A-Bfb7U01p.js}

@@ -1,8 +1,7 @@
-import { o as e, t } from "./chunk-WQLz0Won.js";
-import { g as n, h as r, p as i } from "./src-BQiFKP24.js";
-import { t as a } from "./cytoscape.esm-CPjF_mSK.js";
+import { g as e, h as t, p as n, x as r, y as i } from "./src-v9RrE_4h.js";
+import { t as a } from "./cytoscape.esm-VShrX2U1.js";
 //#region node_modules/layout-base/layout-base.js
-var o = /* @__PURE__ */ t(((e, t) => {
+var o = /* @__PURE__ */ i(((e, t) => {
 	(function(n, r) {
 		typeof e == "object" && typeof t == "object" ? t.exports = r() : typeof define == "function" && define.amd ? define([], r) : typeof e == "object" ? e.layoutBase = r() : n.layoutBase = r();
 	})(e, function() {
@@ -1405,7 +1404,7 @@ var o = /* @__PURE__ */ t(((e, t) => {
 			})
 		]);
 	});
-})), s = /* @__PURE__ */ t(((e, t) => {
+})), s = /* @__PURE__ */ i(((e, t) => {
 	(function(n, r) {
 		typeof e == "object" && typeof t == "object" ? t.exports = r(o()) : typeof define == "function" && define.amd ? define(["layout-base"], r) : typeof e == "object" ? e.coseBase = r(o()) : n.coseBase = r(n.layoutBase);
 	})(e, function(e) {
@@ -1867,7 +1866,7 @@ var o = /* @__PURE__ */ t(((e, t) => {
 			})
 		]);
 	});
-})), c = /* @__PURE__ */ e((/* @__PURE__ */ t(((e, t) => {
+})), c = /* @__PURE__ */ r((/* @__PURE__ */ i(((e, t) => {
 	(function(n, r) {
 		typeof e == "object" && typeof t == "object" ? t.exports = r(s()) : typeof define == "function" && define.amd ? define(["cose-base"], r) : typeof e == "object" ? e.cytoscapeCoseBilkent = r(s()) : n.cytoscapeCoseBilkent = r(n.coseBase);
 	})(e, function(e) {
@@ -2065,7 +2064,7 @@ function l(e, t) {
 		});
 	});
 }
-r(l, "addNodes");
+t(l, "addNodes");
 function u(e, t) {
 	e.forEach((e) => {
 		let n = {
@@ -2085,17 +2084,17 @@ function u(e, t) {
 		});
 	});
 }
-r(u, "addEdges");
-function d(e) {
-	return new Promise((t) => {
-		let r = i("body").append("div").attr("id", "cy").attr("style", "display:none"), o = a({
+t(u, "addEdges");
+function d(t) {
+	return new Promise((r) => {
+		let i = n("body").append("div").attr("id", "cy").attr("style", "display:none"), o = a({
 			container: document.getElementById("cy"),
 			style: [{
 				selector: "edge",
 				style: { "curve-style": "bezier" }
 			}]
 		});
-		r.remove(), l(e.nodes, o), u(e.edges, o), o.nodes().forEach(function(e) {
+		i.remove(), l(t.nodes, o), u(t.edges, o), o.nodes().forEach(function(e) {
 			e.layoutDimensions = () => {
 				let t = e.data();
 				return {
@@ -2108,12 +2107,12 @@ function d(e) {
 			quality: "proof",
 			styleEnabled: !1,
 			animate: !1
-		}).run(), o.ready((e) => {
-			n.info("Cytoscape ready", e), t(o);
+		}).run(), o.ready((t) => {
+			e.info("Cytoscape ready", t), r(o);
 		});
 	});
 }
-r(d, "createCytoscapeInstance");
+t(d, "createCytoscapeInstance");
 function f(e) {
 	return e.nodes().map((e) => {
 		let t = e.data(), n = e.position(), r = {
@@ -2126,7 +2125,7 @@ function f(e) {
 		}), r;
 	});
 }
-r(f, "extractPositionedNodes");
+t(f, "extractPositionedNodes");
 function p(e) {
 	return e.edges().map((e) => {
 		let t = e.data(), n = e._private.rscratch, r = {
@@ -2149,21 +2148,21 @@ function p(e) {
 		}), r;
 	});
 }
-r(p, "extractPositionedEdges");
-async function m(e, t) {
-	n.debug("Starting cose-bilkent layout algorithm");
+t(p, "extractPositionedEdges");
+async function m(t, n) {
+	e.debug("Starting cose-bilkent layout algorithm");
 	try {
-		h(e);
-		let t = await d(e), r = f(t), i = p(t);
-		return n.debug(`Layout completed: ${r.length} nodes, ${i.length} edges`), {
+		h(t);
+		let n = await d(t), r = f(n), i = p(n);
+		return e.debug(`Layout completed: ${r.length} nodes, ${i.length} edges`), {
 			nodes: r,
 			edges: i
 		};
-	} catch (e) {
-		throw n.error("Error in cose-bilkent layout algorithm:", e), e;
+	} catch (t) {
+		throw e.error("Error in cose-bilkent layout algorithm:", t), t;
 	}
 }
-r(m, "executeCoseBilkentLayout");
+t(m, "executeCoseBilkentLayout");
 function h(e) {
 	if (!e) throw Error("Layout data is required");
 	if (!e.config) throw Error("Configuration is required in layout data");
@@ -2172,8 +2171,8 @@ function h(e) {
 	if (!Array.isArray(e.edges)) throw Error("Edges array is required in layout data");
 	return !0;
 }
-r(h, "validateLayoutData");
-var g = /* @__PURE__ */ r(async (e, t, { insertCluster: n, insertEdge: r, insertEdgeLabel: i, insertMarkers: a, insertNode: o, log: s, positionEdgeLabel: c }, { algorithm: l }) => {
+t(h, "validateLayoutData");
+var g = /* @__PURE__ */ t(async (e, t, { insertCluster: n, insertEdge: r, insertEdgeLabel: i, insertMarkers: a, insertNode: o, log: s, positionEdgeLabel: c }, { algorithm: l }) => {
 	let u = {}, d = {}, f = t.select("g");
 	a(f, e.markers, e.type, e.diagramId);
 	let p = f.insert("g").attr("class", "subgraphs"), h = f.insert("g").attr("class", "edgePaths"), g = f.insert("g").attr("class", "edgeLabels"), _ = f.insert("g").attr("class", "nodes");

package/dist/cose-bilkent-S5V4N54A-CE-7Sw0Y.cjs

@@ -0,0 +1 @@
+const e=require(`./src-BgvDIw01.cjs`),t=require(`./cytoscape.esm-BzblyxzZ.cjs`);var n=e.y(((e,t)=>{(function(n,r){typeof e==`object`&&typeof t==`object`?t.exports=r():typeof define==`function`&&define.amd?define([],r):typeof e==`object`?e.layoutBase=r():n.layoutBase=r()})(e,function(){return(function(e){var t={};function n(r){if(t[r])return t[r].exports;var i=t[r]={i:r,l:!1,exports:{}};return e[r].call(i.exports,i,i.exports,n),i.l=!0,i.exports}return n.m=e,n.c=t,n.i=function(e){return e},n.d=function(e,t,r){n.o(e,t)||Object.defineProperty(e,t,{configurable:!1,enumerable:!0,get:r})},n.n=function(e){var t=e&&e.__esModule?function(){return e.default}:function(){return e};return n.d(t,`a`,t),t},n.o=function(e,t){return Object.prototype.hasOwnProperty.call(e,t)},n.p=``,n(n.s=26)})([(function(e,t,n){"use strict";function r(){}r.QUALITY=1,r.DEFAULT_CREATE_BENDS_AS_NEEDED=!1,r.DEFAULT_INCREMENTAL=!1,r.DEFAULT_ANIMATION_ON_LAYOUT=!0,r.DEFAULT_ANIMATION_DURING_LAYOUT=!1,r.DEFAULT_ANIMATION_PERIOD=50,r.DEFAULT_UNIFORM_LEAF_NODE_SIZES=!1,r.DEFAULT_GRAPH_MARGIN=15,r.NODE_DIMENSIONS_INCLUDE_LABELS=!1,r.SIMPLE_NODE_SIZE=40,r.SIMPLE_NODE_HALF_SIZE=r.SIMPLE_NODE_SIZE/2,r.EMPTY_COMPOUND_NODE_SIZE=40,r.MIN_EDGE_LENGTH=1,r.WORLD_BOUNDARY=1e6,r.INITIAL_WORLD_BOUNDARY=r.WORLD_BOUNDARY/1e3,r.WORLD_CENTER_X=1200,r.WORLD_CENTER_Y=900,e.exports=r}),(function(e,t,n){"use strict";var r=n(2),i=n(8),a=n(9);function o(e,t,n){r.call(this,n),this.isOverlapingSourceAndTarget=!1,this.vGraphObject=n,this.bendpoints=[],this.source=e,this.target=t}for(var s in o.prototype=Object.create(r.prototype),r)o[s]=r[s];o.prototype.getSource=function(){return this.source},o.prototype.getTarget=function(){return this.target},o.prototype.isInterGraph=function(){return this.isInterGraph},o.prototype.getLength=function(){return this.length},o.prototype.isOverlapingSourceAndTarget=function(){return this.isOverlapingSourceAndTarget},o.prototype.getBendpoints=function(){return this.bendpoints},o.prototype.getLca=function(){return this.lca},o.prototype.getSourceInLca=function(){return this.sourceInLca},o.prototype.getTargetInLca=function(){return this.targetInLca},o.prototype.getOtherEnd=function(e){if(this.source===e)return this.target;if(this.target===e)return this.source;throw`Node is not incident with this edge`},o.prototype.getOtherEndInGraph=function(e,t){for(var n=this.getOtherEnd(e),r=t.getGraphManager().getRoot();;){if(n.getOwner()==t)return n;if(n.getOwner()==r)break;n=n.getOwner().getParent()}return null},o.prototype.updateLength=function(){var e=[,,,,];this.isOverlapingSourceAndTarget=i.getIntersection(this.target.getRect(),this.source.getRect(),e),this.isOverlapingSourceAndTarget||(this.lengthX=e[0]-e[2],this.lengthY=e[1]-e[3],Math.abs(this.lengthX)<1&&(this.lengthX=a.sign(this.lengthX)),Math.abs(this.lengthY)<1&&(this.lengthY=a.sign(this.lengthY)),this.length=Math.sqrt(this.lengthX*this.lengthX+this.lengthY*this.lengthY))},o.prototype.updateLengthSimple=function(){this.lengthX=this.target.getCenterX()-this.source.getCenterX(),this.lengthY=this.target.getCenterY()-this.source.getCenterY(),Math.abs(this.lengthX)<1&&(this.lengthX=a.sign(this.lengthX)),Math.abs(this.lengthY)<1&&(this.lengthY=a.sign(this.lengthY)),this.length=Math.sqrt(this.lengthX*this.lengthX+this.lengthY*this.lengthY)},e.exports=o}),(function(e,t,n){"use strict";function r(e){this.vGraphObject=e}e.exports=r}),(function(e,t,n){"use strict";var r=n(2),i=n(10),a=n(13),o=n(0),s=n(16),c=n(4);function l(e,t,n,o){n==null&&o==null&&(o=t),r.call(this,o),e.graphManager!=null&&(e=e.graphManager),this.estimatedSize=i.MIN_VALUE,this.inclusionTreeDepth=i.MAX_VALUE,this.vGraphObject=o,this.edges=[],this.graphManager=e,n!=null&&t!=null?this.rect=new a(t.x,t.y,n.width,n.height):this.rect=new a}for(var u in l.prototype=Object.create(r.prototype),r)l[u]=r[u];l.prototype.getEdges=function(){return this.edges},l.prototype.getChild=function(){return this.child},l.prototype.getOwner=function(){return this.owner},l.prototype.getWidth=function(){return this.rect.width},l.prototype.setWidth=function(e){this.rect.width=e},l.prototype.getHeight=function(){return this.rect.height},l.prototype.setHeight=function(e){this.rect.height=e},l.prototype.getCenterX=function(){return this.rect.x+this.rect.width/2},l.prototype.getCenterY=function(){return this.rect.y+this.rect.height/2},l.prototype.getCenter=function(){return new c(this.rect.x+this.rect.width/2,this.rect.y+this.rect.height/2)},l.prototype.getLocation=function(){return new c(this.rect.x,this.rect.y)},l.prototype.getRect=function(){return this.rect},l.prototype.getDiagonal=function(){return Math.sqrt(this.rect.width*this.rect.width+this.rect.height*this.rect.height)},l.prototype.getHalfTheDiagonal=function(){return Math.sqrt(this.rect.height*this.rect.height+this.rect.width*this.rect.width)/2},l.prototype.setRect=function(e,t){this.rect.x=e.x,this.rect.y=e.y,this.rect.width=t.width,this.rect.height=t.height},l.prototype.setCenter=function(e,t){this.rect.x=e-this.rect.width/2,this.rect.y=t-this.rect.height/2},l.prototype.setLocation=function(e,t){this.rect.x=e,this.rect.y=t},l.prototype.moveBy=function(e,t){this.rect.x+=e,this.rect.y+=t},l.prototype.getEdgeListToNode=function(e){var t=[],n=this;return n.edges.forEach(function(r){if(r.target==e){if(r.source!=n)throw`Incorrect edge source!`;t.push(r)}}),t},l.prototype.getEdgesBetween=function(e){var t=[],n=this;return n.edges.forEach(function(r){if(!(r.source==n||r.target==n))throw`Incorrect edge source and/or target`;(r.target==e||r.source==e)&&t.push(r)}),t},l.prototype.getNeighborsList=function(){var e=new Set,t=this;return t.edges.forEach(function(n){if(n.source==t)e.add(n.target);else{if(n.target!=t)throw`Incorrect incidency!`;e.add(n.source)}}),e},l.prototype.withChildren=function(){var e=new Set,t,n;if(e.add(this),this.child!=null)for(var r=this.child.getNodes(),i=0;i<r.length;i++)t=r[i],n=t.withChildren(),n.forEach(function(t){e.add(t)});return e},l.prototype.getNoOfChildren=function(){var e=0,t;if(this.child==null)e=1;else for(var n=this.child.getNodes(),r=0;r<n.length;r++)t=n[r],e+=t.getNoOfChildren();return e==0&&(e=1),e},l.prototype.getEstimatedSize=function(){if(this.estimatedSize==i.MIN_VALUE)throw`assert failed`;return this.estimatedSize},l.prototype.calcEstimatedSize=function(){return this.child==null?this.estimatedSize=(this.rect.width+this.rect.height)/2:(this.estimatedSize=this.child.calcEstimatedSize(),this.rect.width=this.estimatedSize,this.rect.height=this.estimatedSize,this.estimatedSize)},l.prototype.scatter=function(){var e,t,n=-o.INITIAL_WORLD_BOUNDARY,r=o.INITIAL_WORLD_BOUNDARY;e=o.WORLD_CENTER_X+s.nextDouble()*(r-n)+n;var i=-o.INITIAL_WORLD_BOUNDARY,a=o.INITIAL_WORLD_BOUNDARY;t=o.WORLD_CENTER_Y+s.nextDouble()*(a-i)+i,this.rect.x=e,this.rect.y=t},l.prototype.updateBounds=function(){if(this.getChild()==null)throw`assert failed`;if(this.getChild().getNodes().length!=0){var e=this.getChild();if(e.updateBounds(!0),this.rect.x=e.getLeft(),this.rect.y=e.getTop(),this.setWidth(e.getRight()-e.getLeft()),this.setHeight(e.getBottom()-e.getTop()),o.NODE_DIMENSIONS_INCLUDE_LABELS){var t=e.getRight()-e.getLeft(),n=e.getBottom()-e.getTop();this.labelWidth>t&&(this.rect.x-=(this.labelWidth-t)/2,this.setWidth(this.labelWidth)),this.labelHeight>n&&(this.labelPos==`center`?this.rect.y-=(this.labelHeight-n)/2:this.labelPos==`top`&&(this.rect.y-=this.labelHeight-n),this.setHeight(this.labelHeight))}}},l.prototype.getInclusionTreeDepth=function(){if(this.inclusionTreeDepth==i.MAX_VALUE)throw`assert failed`;return this.inclusionTreeDepth},l.prototype.transform=function(e){var t=this.rect.x;t>o.WORLD_BOUNDARY?t=o.WORLD_BOUNDARY:t<-o.WORLD_BOUNDARY&&(t=-o.WORLD_BOUNDARY);var n=this.rect.y;n>o.WORLD_BOUNDARY?n=o.WORLD_BOUNDARY:n<-o.WORLD_BOUNDARY&&(n=-o.WORLD_BOUNDARY);var r=new c(t,n),i=e.inverseTransformPoint(r);this.setLocation(i.x,i.y)},l.prototype.getLeft=function(){return this.rect.x},l.prototype.getRight=function(){return this.rect.x+this.rect.width},l.prototype.getTop=function(){return this.rect.y},l.prototype.getBottom=function(){return this.rect.y+this.rect.height},l.prototype.getParent=function(){return this.owner==null?null:this.owner.getParent()},e.exports=l}),(function(e,t,n){"use strict";function r(e,t){e==null&&t==null?(this.x=0,this.y=0):(this.x=e,this.y=t)}r.prototype.getX=function(){return this.x},r.prototype.getY=function(){return this.y},r.prototype.setX=function(e){this.x=e},r.prototype.setY=function(e){this.y=e},r.prototype.getDifference=function(e){return new DimensionD(this.x-e.x,this.y-e.y)},r.prototype.getCopy=function(){return new r(this.x,this.y)},r.prototype.translate=function(e){return this.x+=e.width,this.y+=e.height,this},e.exports=r}),(function(e,t,n){"use strict";var r=n(2),i=n(10),a=n(0),o=n(6),s=n(3),c=n(1),l=n(13),u=n(12),d=n(11);function f(e,t,n){r.call(this,n),this.estimatedSize=i.MIN_VALUE,this.margin=a.DEFAULT_GRAPH_MARGIN,this.edges=[],this.nodes=[],this.isConnected=!1,this.parent=e,t!=null&&t instanceof o?this.graphManager=t:t!=null&&t instanceof Layout&&(this.graphManager=t.graphManager)}for(var p in f.prototype=Object.create(r.prototype),r)f[p]=r[p];f.prototype.getNodes=function(){return this.nodes},f.prototype.getEdges=function(){return this.edges},f.prototype.getGraphManager=function(){return this.graphManager},f.prototype.getParent=function(){return this.parent},f.prototype.getLeft=function(){return this.left},f.prototype.getRight=function(){return this.right},f.prototype.getTop=function(){return this.top},f.prototype.getBottom=function(){return this.bottom},f.prototype.isConnected=function(){return this.isConnected},f.prototype.add=function(e,t,n){if(t==null&&n==null){var r=e;if(this.graphManager==null)throw`Graph has no graph mgr!`;if(this.getNodes().indexOf(r)>-1)throw`Node already in graph!`;return r.owner=this,this.getNodes().push(r),r}else{var i=e;if(!(this.getNodes().indexOf(t)>-1&&this.getNodes().indexOf(n)>-1))throw`Source or target not in graph!`;if(!(t.owner==n.owner&&t.owner==this))throw`Both owners must be this graph!`;return t.owner==n.owner?(i.source=t,i.target=n,i.isInterGraph=!1,this.getEdges().push(i),t.edges.push(i),n!=t&&n.edges.push(i),i):null}},f.prototype.remove=function(e){var t=e;if(e instanceof s){if(t==null)throw`Node is null!`;if(!(t.owner!=null&&t.owner==this))throw`Owner graph is invalid!`;if(this.graphManager==null)throw`Owner graph manager is invalid!`;for(var n=t.edges.slice(),r,i=n.length,a=0;a<i;a++)r=n[a],r.isInterGraph?this.graphManager.remove(r):r.source.owner.remove(r);var o=this.nodes.indexOf(t);if(o==-1)throw`Node not in owner node list!`;this.nodes.splice(o,1)}else if(e instanceof c){var r=e;if(r==null)throw`Edge is null!`;if(!(r.source!=null&&r.target!=null))throw`Source and/or target is null!`;if(!(r.source.owner!=null&&r.target.owner!=null&&r.source.owner==this&&r.target.owner==this))throw`Source and/or target owner is invalid!`;var l=r.source.edges.indexOf(r),u=r.target.edges.indexOf(r);if(!(l>-1&&u>-1))throw`Source and/or target doesn't know this edge!`;r.source.edges.splice(l,1),r.target!=r.source&&r.target.edges.splice(u,1);var o=r.source.owner.getEdges().indexOf(r);if(o==-1)throw`Not in owner's edge list!`;r.source.owner.getEdges().splice(o,1)}},f.prototype.updateLeftTop=function(){for(var e=i.MAX_VALUE,t=i.MAX_VALUE,n,r,a,o=this.getNodes(),s=o.length,c=0;c<s;c++){var l=o[c];n=l.getTop(),r=l.getLeft(),e>n&&(e=n),t>r&&(t=r)}return e==i.MAX_VALUE?null:(a=o[0].getParent().paddingLeft==null?this.margin:o[0].getParent().paddingLeft,this.left=t-a,this.top=e-a,new u(this.left,this.top))},f.prototype.updateBounds=function(e){for(var t=i.MAX_VALUE,n=-i.MAX_VALUE,r=i.MAX_VALUE,a=-i.MAX_VALUE,o,s,c,u,d,f=this.nodes,p=f.length,m=0;m<p;m++){var h=f[m];e&&h.child!=null&&h.updateBounds(),o=h.getLeft(),s=h.getRight(),c=h.getTop(),u=h.getBottom(),t>o&&(t=o),n<s&&(n=s),r>c&&(r=c),a<u&&(a=u)}var g=new l(t,r,n-t,a-r);t==i.MAX_VALUE&&(this.left=this.parent.getLeft(),this.right=this.parent.getRight(),this.top=this.parent.getTop(),this.bottom=this.parent.getBottom()),d=f[0].getParent().paddingLeft==null?this.margin:f[0].getParent().paddingLeft,this.left=g.x-d,this.right=g.x+g.width+d,this.top=g.y-d,this.bottom=g.y+g.height+d},f.calculateBounds=function(e){for(var t=i.MAX_VALUE,n=-i.MAX_VALUE,r=i.MAX_VALUE,a=-i.MAX_VALUE,o,s,c,u,d=e.length,f=0;f<d;f++){var p=e[f];o=p.getLeft(),s=p.getRight(),c=p.getTop(),u=p.getBottom(),t>o&&(t=o),n<s&&(n=s),r>c&&(r=c),a<u&&(a=u)}return new l(t,r,n-t,a-r)},f.prototype.getInclusionTreeDepth=function(){return this==this.graphManager.getRoot()?1:this.parent.getInclusionTreeDepth()},f.prototype.getEstimatedSize=function(){if(this.estimatedSize==i.MIN_VALUE)throw`assert failed`;return this.estimatedSize},f.prototype.calcEstimatedSize=function(){for(var e=0,t=this.nodes,n=t.length,r=0;r<n;r++){var i=t[r];e+=i.calcEstimatedSize()}return e==0?this.estimatedSize=a.EMPTY_COMPOUND_NODE_SIZE:this.estimatedSize=e/Math.sqrt(this.nodes.length),this.estimatedSize},f.prototype.updateConnected=function(){var e=this;if(this.nodes.length==0){this.isConnected=!0;return}var t=new d,n=new Set,r=this.nodes[0],i,a;for(r.withChildren().forEach(function(e){t.push(e),n.add(e)});t.length!==0;){r=t.shift(),i=r.getEdges();for(var o=i.length,s=0;s<o;s++)a=i[s].getOtherEndInGraph(r,this),a!=null&&!n.has(a)&&a.withChildren().forEach(function(e){t.push(e),n.add(e)})}if(this.isConnected=!1,n.size>=this.nodes.length){var c=0;n.forEach(function(t){t.owner==e&&c++}),c==this.nodes.length&&(this.isConnected=!0)}},e.exports=f}),(function(e,t,n){"use strict";var r,i=n(1);function a(e){r=n(5),this.layout=e,this.graphs=[],this.edges=[]}a.prototype.addRoot=function(){var e=this.layout.newGraph(),t=this.layout.newNode(null),n=this.add(e,t);return 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i.ANIMATE===`during`?!1:(e&&(this.isSubLayout||this.doPostLayout()),this.tilingPostLayout&&this.tilingPostLayout(),this.isLayoutFinished=!0,e)},f.prototype.doPostLayout=function(){this.incremental||this.transform(),this.update()},f.prototype.update2=function(){if(this.createBendsAsNeeded&&(this.createBendpointsFromDummyNodes(),this.graphManager.resetAllEdges()),!this.isRemoteUse){for(var e=this.graphManager.getAllEdges(),t=0;t<e.length;t++)e[t];for(var n=this.graphManager.getRoot().getNodes(),t=0;t<n.length;t++)n[t];this.update(this.graphManager.getRoot())}},f.prototype.update=function(e){if(e==null)this.update2();else if(e instanceof o){var t=e;if(t.getChild()!=null)for(var n=t.getChild().getNodes(),r=0;r<n.length;r++)update(n[r]);t.vGraphObject!=null&&t.vGraphObject.update(t)}else if(e instanceof s){var i=e;i.vGraphObject!=null&&i.vGraphObject.update(i)}else if(e instanceof c){var a=e;a.vGraphObject!=null&&a.vGraphObject.update(a)}},f.prototype.initParameters=function(){this.isSubLayout||(this.layoutQuality=i.QUALITY,this.animationDuringLayout=i.DEFAULT_ANIMATION_DURING_LAYOUT,this.animationPeriod=i.DEFAULT_ANIMATION_PERIOD,this.animationOnLayout=i.DEFAULT_ANIMATION_ON_LAYOUT,this.incremental=i.DEFAULT_INCREMENTAL,this.createBendsAsNeeded=i.DEFAULT_CREATE_BENDS_AS_NEEDED,this.uniformLeafNodeSizes=i.DEFAULT_UNIFORM_LEAF_NODE_SIZES),this.animationDuringLayout&&(this.animationOnLayout=!1)},f.prototype.transform=function(e){if(e==null)this.transform(new l(0,0));else{var t=new u,n=this.graphManager.getRoot().updateLeftTop();if(n!=null){t.setWorldOrgX(e.x),t.setWorldOrgY(e.y),t.setDeviceOrgX(n.x),t.setDeviceOrgY(n.y);for(var r=this.getAllNodes(),i,a=0;a<r.length;a++)i=r[a],i.transform(t)}}},f.prototype.positionNodesRandomly=function(e){if(e==null)this.positionNodesRandomly(this.getGraphManager().getRoot()),this.getGraphManager().getRoot().updateBounds(!0);else for(var t,n,r=e.getNodes(),i=0;i<r.length;i++)t=r[i],n=t.getChild(),n==null||n.getNodes().length==0?t.scatter():(this.positionNodesRandomly(n),t.updateBounds())},f.prototype.getFlatForest=function(){for(var e=[],t=!0,n=this.graphManager.getRoot().getNodes(),i=!0,a=0;a<n.length;a++)n[a].getChild()!=null&&(i=!1);if(!i)return e;var o=new Set,s=[],c=new Map,l=[];for(l=l.concat(n);l.length>0&&t;){for(s.push(l[0]);s.length>0&&t;){var u=s[0];s.splice(0,1),o.add(u);for(var d=u.getEdges(),a=0;a<d.length;a++){var f=d[a].getOtherEnd(u);if(c.get(u)!=f)if(!o.has(f))s.push(f),c.set(f,u);else{t=!1;break}}}if(!t)e=[];else{var p=[].concat(r(o));e.push(p);for(var a=0;a<p.length;a++){var m=p[a],h=l.indexOf(m);h>-1&&l.splice(h,1)}o=new Set,c=new Map}}return e},f.prototype.createDummyNodesForBendpoints=function(e){for(var t=[],n=e.source,r=this.graphManager.calcLowestCommonAncestor(e.source,e.target),i=0;i<e.bendpoints.length;i++){var a=this.newNode(null);a.setRect(new Point(0,0),new Dimension(1,1)),r.add(a);var o=this.newEdge(null);this.graphManager.add(o,n,a),t.add(a),n=a}var o=this.newEdge(null);return this.graphManager.add(o,n,e.target),this.edgeToDummyNodes.set(e,t),e.isInterGraph()?this.graphManager.remove(e):r.remove(e),t},f.prototype.createBendpointsFromDummyNodes=function(){var e=[];e=e.concat(this.graphManager.getAllEdges()),e=[].concat(r(this.edgeToDummyNodes.keys()),e);for(var t=0;t<e.length;t++){var n=e[t];if(n.bendpoints.length>0){for(var i=this.edgeToDummyNodes.get(n),a=0;a<i.length;a++){var o=i[a],s=new l(o.getCenterX(),o.getCenterY()),c=n.bendpoints.get(a);c.x=s.x,c.y=s.y,o.getOwner().remove(o)}this.graphManager.add(n,n.source,n.target)}}},f.transform=function(e,t,n,r){if(n!=null&&r!=null){var i=t;if(e<=50){var a=t/n;i-=(t-a)/50*(50-e)}else{var o=t*r;i+=(o-t)/50*(e-50)}return i}else{var s,c;return e<=50?(s=9*t/500,c=t/10):(s=9*t/50,c=-8*t),s*e+c}},f.findCenterOfTree=function(e){var t=[];t=t.concat(e);var n=[],r=new Map,i=!1,a=null;(t.length==1||t.length==2)&&(i=!0,a=t[0]);for(var o=0;o<t.length;o++){var s=t[o],c=s.getNeighborsList().size;r.set(s,s.getNeighborsList().size),c==1&&n.push(s)}var l=[];for(l=l.concat(n);!i;){var u=[];u=u.concat(l),l=[];for(var o=0;o<t.length;o++){var s=t[o],d=t.indexOf(s);d>=0&&t.splice(d,1),s.getNeighborsList().forEach(function(e){if(n.indexOf(e)<0){var t=r.get(e)-1;t==1&&l.push(e),r.set(e,t)}})}n=n.concat(l),(t.length==1||t.length==2)&&(i=!0,a=t[0])}return a},f.prototype.setGraphManager=function(e){this.graphManager=e},e.exports=f}),(function(e,t,n){"use strict";function r(){}r.seed=1,r.x=0,r.nextDouble=function(){return r.x=Math.sin(r.seed++)*1e4,r.x-Math.floor(r.x)},e.exports=r}),(function(e,t,n){"use strict";var r=n(4);function i(e,t){this.lworldOrgX=0,this.lworldOrgY=0,this.ldeviceOrgX=0,this.ldeviceOrgY=0,this.lworldExtX=1,this.lworldExtY=1,this.ldeviceExtX=1,this.ldeviceExtY=1}i.prototype.getWorldOrgX=function(){return this.lworldOrgX},i.prototype.setWorldOrgX=function(e){this.lworldOrgX=e},i.prototype.getWorldOrgY=function(){return this.lworldOrgY},i.prototype.setWorldOrgY=function(e){this.lworldOrgY=e},i.prototype.getWorldExtX=function(){return this.lworldExtX},i.prototype.setWorldExtX=function(e){this.lworldExtX=e},i.prototype.getWorldExtY=function(){return this.lworldExtY},i.prototype.setWorldExtY=function(e){this.lworldExtY=e},i.prototype.getDeviceOrgX=function(){return this.ldeviceOrgX},i.prototype.setDeviceOrgX=function(e){this.ldeviceOrgX=e},i.prototype.getDeviceOrgY=function(){return this.ldeviceOrgY},i.prototype.setDeviceOrgY=function(e){this.ldeviceOrgY=e},i.prototype.getDeviceExtX=function(){return this.ldeviceExtX},i.prototype.setDeviceExtX=function(e){this.ldeviceExtX=e},i.prototype.getDeviceExtY=function(){return this.ldeviceExtY},i.prototype.setDeviceExtY=function(e){this.ldeviceExtY=e},i.prototype.transformX=function(e){var t=0,n=this.lworldExtX;return n!=0&&(t=this.ldeviceOrgX+(e-this.lworldOrgX)*this.ldeviceExtX/n),t},i.prototype.transformY=function(e){var t=0,n=this.lworldExtY;return n!=0&&(t=this.ldeviceOrgY+(e-this.lworldOrgY)*this.ldeviceExtY/n),t},i.prototype.inverseTransformX=function(e){var t=0,n=this.ldeviceExtX;return n!=0&&(t=this.lworldOrgX+(e-this.ldeviceOrgX)*this.lworldExtX/n),t},i.prototype.inverseTransformY=function(e){var t=0,n=this.ldeviceExtY;return n!=0&&(t=this.lworldOrgY+(e-this.ldeviceOrgY)*this.lworldExtY/n),t},i.prototype.inverseTransformPoint=function(e){return new r(this.inverseTransformX(e.x),this.inverseTransformY(e.y))},e.exports=i}),(function(e,t,n){"use strict";function r(e){if(Array.isArray(e)){for(var t=0,n=Array(e.length);t<e.length;t++)n[t]=e[t];return n}else return Array.from(e)}var i=n(15),a=n(7),o=n(0),s=n(8),c=n(9);function l(){i.call(this),this.useSmartIdealEdgeLengthCalculation=a.DEFAULT_USE_SMART_IDEAL_EDGE_LENGTH_CALCULATION,this.idealEdgeLength=a.DEFAULT_EDGE_LENGTH,this.springConstant=a.DEFAULT_SPRING_STRENGTH,this.repulsionConstant=a.DEFAULT_REPULSION_STRENGTH,this.gravityConstant=a.DEFAULT_GRAVITY_STRENGTH,this.compoundGravityConstant=a.DEFAULT_COMPOUND_GRAVITY_STRENGTH,this.gravityRangeFactor=a.DEFAULT_GRAVITY_RANGE_FACTOR,this.compoundGravityRangeFactor=a.DEFAULT_COMPOUND_GRAVITY_RANGE_FACTOR,this.displacementThresholdPerNode=3*a.DEFAULT_EDGE_LENGTH/100,this.coolingFactor=a.DEFAULT_COOLING_FACTOR_INCREMENTAL,this.initialCoolingFactor=a.DEFAULT_COOLING_FACTOR_INCREMENTAL,this.totalDisplacement=0,this.oldTotalDisplacement=0,this.maxIterations=a.MAX_ITERATIONS}for(var u in l.prototype=Object.create(i.prototype),i)l[u]=i[u];l.prototype.initParameters=function(){i.prototype.initParameters.call(this,arguments),this.totalIterations=0,this.notAnimatedIterations=0,this.useFRGridVariant=a.DEFAULT_USE_SMART_REPULSION_RANGE_CALCULATION,this.grid=[]},l.prototype.calcIdealEdgeLengths=function(){for(var e,t,n,r,i,s,c=this.getGraphManager().getAllEdges(),l=0;l<c.length;l++)e=c[l],e.idealLength=this.idealEdgeLength,e.isInterGraph&&(n=e.getSource(),r=e.getTarget(),i=e.getSourceInLca().getEstimatedSize(),s=e.getTargetInLca().getEstimatedSize(),this.useSmartIdealEdgeLengthCalculation&&(e.idealLength+=i+s-2*o.SIMPLE_NODE_SIZE),t=e.getLca().getInclusionTreeDepth(),e.idealLength+=a.DEFAULT_EDGE_LENGTH*a.PER_LEVEL_IDEAL_EDGE_LENGTH_FACTOR*(n.getInclusionTreeDepth()+r.getInclusionTreeDepth()-2*t))},l.prototype.initSpringEmbedder=function(){var e=this.getAllNodes().length;this.incremental?(e>a.ADAPTATION_LOWER_NODE_LIMIT&&(this.coolingFactor=Math.max(this.coolingFactor*a.COOLING_ADAPTATION_FACTOR,this.coolingFactor-(e-a.ADAPTATION_LOWER_NODE_LIMIT)/(a.ADAPTATION_UPPER_NODE_LIMIT-a.ADAPTATION_LOWER_NODE_LIMIT)*this.coolingFactor*(1-a.COOLING_ADAPTATION_FACTOR))),this.maxNodeDisplacement=a.MAX_NODE_DISPLACEMENT_INCREMENTAL):(e>a.ADAPTATION_LOWER_NODE_LIMIT?this.coolingFactor=Math.max(a.COOLING_ADAPTATION_FACTOR,1-(e-a.ADAPTATION_LOWER_NODE_LIMIT)/(a.ADAPTATION_UPPER_NODE_LIMIT-a.ADAPTATION_LOWER_NODE_LIMIT)*(1-a.COOLING_ADAPTATION_FACTOR)):this.coolingFactor=1,this.initialCoolingFactor=this.coolingFactor,this.maxNodeDisplacement=a.MAX_NODE_DISPLACEMENT),this.maxIterations=Math.max(this.getAllNodes().length*5,this.maxIterations),this.totalDisplacementThreshold=this.displacementThresholdPerNode*this.getAllNodes().length,this.repulsionRange=this.calcRepulsionRange()},l.prototype.calcSpringForces=function(){for(var e=this.getAllEdges(),t,n=0;n<e.length;n++)t=e[n],this.calcSpringForce(t,t.idealLength)},l.prototype.calcRepulsionForces=function(){var e=arguments.length>0&&arguments[0]!==void 0?arguments[0]:!0,t=arguments.length>1&&arguments[1]!==void 0?arguments[1]:!1,n,r,i,o,s=this.getAllNodes(),c;if(this.useFRGridVariant)for(this.totalIterations%a.GRID_CALCULATION_CHECK_PERIOD==1&&e&&this.updateGrid(),c=new Set,n=0;n<s.length;n++)i=s[n],this.calculateRepulsionForceOfANode(i,c,e,t),c.add(i);else for(n=0;n<s.length;n++)for(i=s[n],r=n+1;r<s.length;r++)o=s[r],i.getOwner()==o.getOwner()&&this.calcRepulsionForce(i,o)},l.prototype.calcGravitationalForces=function(){for(var e,t=this.getAllNodesToApplyGravitation(),n=0;n<t.length;n++)e=t[n],this.calcGravitationalForce(e)},l.prototype.moveNodes=function(){for(var e=this.getAllNodes(),t,n=0;n<e.length;n++)t=e[n],t.move()},l.prototype.calcSpringForce=function(e,t){var n=e.getSource(),r=e.getTarget(),i,a,o,s;if(this.uniformLeafNodeSizes&&n.getChild()==null&&r.getChild()==null)e.updateLengthSimple();else if(e.updateLength(),e.isOverlapingSourceAndTarget)return;i=e.getLength(),i!=0&&(a=this.springConstant*(i-t),o=a*(e.lengthX/i),s=a*(e.lengthY/i),n.springForceX+=o,n.springForceY+=s,r.springForceX-=o,r.springForceY-=s)},l.prototype.calcRepulsionForce=function(e,t){var n=e.getRect(),r=t.getRect(),i=[,,],o=[,,,,],l,u,d,f,p,m,h;if(n.intersects(r)){s.calcSeparationAmount(n,r,i,a.DEFAULT_EDGE_LENGTH/2),m=2*i[0],h=2*i[1];var g=e.noOfChildren*t.noOfChildren/(e.noOfChildren+t.noOfChildren);e.repulsionForceX-=g*m,e.repulsionForceY-=g*h,t.repulsionForceX+=g*m,t.repulsionForceY+=g*h}else this.uniformLeafNodeSizes&&e.getChild()==null&&t.getChild()==null?(l=r.getCenterX()-n.getCenterX(),u=r.getCenterY()-n.getCenterY()):(s.getIntersection(n,r,o),l=o[2]-o[0],u=o[3]-o[1]),Math.abs(l)<a.MIN_REPULSION_DIST&&(l=c.sign(l)*a.MIN_REPULSION_DIST),Math.abs(u)<a.MIN_REPULSION_DIST&&(u=c.sign(u)*a.MIN_REPULSION_DIST),d=l*l+u*u,f=Math.sqrt(d),p=this.repulsionConstant*e.noOfChildren*t.noOfChildren/d,m=p*l/f,h=p*u/f,e.repulsionForceX-=m,e.repulsionForceY-=h,t.repulsionForceX+=m,t.repulsionForceY+=h},l.prototype.calcGravitationalForce=function(e){var t=e.getOwner(),n=(t.getRight()+t.getLeft())/2,r=(t.getTop()+t.getBottom())/2,i=e.getCenterX()-n,a=e.getCenterY()-r,o=Math.abs(i)+e.getWidth()/2,s=Math.abs(a)+e.getHeight()/2,c;e.getOwner()==this.graphManager.getRoot()?(c=t.getEstimatedSize()*this.gravityRangeFactor,(o>c||s>c)&&(e.gravitationForceX=-this.gravityConstant*i,e.gravitationForceY=-this.gravityConstant*a)):(c=t.getEstimatedSize()*this.compoundGravityRangeFactor,(o>c||s>c)&&(e.gravitationForceX=-this.gravityConstant*i*this.compoundGravityConstant,e.gravitationForceY=-this.gravityConstant*a*this.compoundGravityConstant))},l.prototype.isConverged=function(){var e,t=!1;return this.totalIterations>this.maxIterations/3&&(t=Math.abs(this.totalDisplacement-this.oldTotalDisplacement)<2),e=this.totalDisplacement<this.totalDisplacementThreshold,this.oldTotalDisplacement=this.totalDisplacement,e||t},l.prototype.animate=function(){this.animationDuringLayout&&!this.isSubLayout&&(this.notAnimatedIterations==this.animationPeriod?(this.update(),this.notAnimatedIterations=0):this.notAnimatedIterations++)},l.prototype.calcNoOfChildrenForAllNodes=function(){for(var e,t=this.graphManager.getAllNodes(),n=0;n<t.length;n++)e=t[n],e.noOfChildren=e.getNoOfChildren()},l.prototype.calcGrid=function(e){var t=0,n=0;t=parseInt(Math.ceil((e.getRight()-e.getLeft())/this.repulsionRange)),n=parseInt(Math.ceil((e.getBottom()-e.getTop())/this.repulsionRange));for(var r=Array(t),i=0;i<t;i++)r[i]=Array(n);for(var i=0;i<t;i++)for(var a=0;a<n;a++)r[i][a]=[];return r},l.prototype.addNodeToGrid=function(e,t,n){var r=0,i=0,a=0,o=0;r=parseInt(Math.floor((e.getRect().x-t)/this.repulsionRange)),i=parseInt(Math.floor((e.getRect().width+e.getRect().x-t)/this.repulsionRange)),a=parseInt(Math.floor((e.getRect().y-n)/this.repulsionRange)),o=parseInt(Math.floor((e.getRect().height+e.getRect().y-n)/this.repulsionRange));for(var s=r;s<=i;s++)for(var c=a;c<=o;c++)this.grid[s][c].push(e),e.setGridCoordinates(r,i,a,o)},l.prototype.updateGrid=function(){var e,t,n=this.getAllNodes();for(this.grid=this.calcGrid(this.graphManager.getRoot()),e=0;e<n.length;e++)t=n[e],this.addNodeToGrid(t,this.graphManager.getRoot().getLeft(),this.graphManager.getRoot().getTop())},l.prototype.calculateRepulsionForceOfANode=function(e,t,n,i){if(this.totalIterations%a.GRID_CALCULATION_CHECK_PERIOD==1&&n||i){var o=new Set;e.surrounding=[];for(var s,c=this.grid,l=e.startX-1;l<e.finishX+2;l++)for(var u=e.startY-1;u<e.finishY+2;u++)if(!(l<0||u<0||l>=c.length||u>=c[0].length)){for(var d=0;d<c[l][u].length;d++)if(s=c[l][u][d],!(e.getOwner()!=s.getOwner()||e==s)&&!t.has(s)&&!o.has(s)){var f=Math.abs(e.getCenterX()-s.getCenterX())-(e.getWidth()/2+s.getWidth()/2),p=Math.abs(e.getCenterY()-s.getCenterY())-(e.getHeight()/2+s.getHeight()/2);f<=this.repulsionRange&&p<=this.repulsionRange&&o.add(s)}}e.surrounding=[].concat(r(o))}for(l=0;l<e.surrounding.length;l++)this.calcRepulsionForce(e,e.surrounding[l])},l.prototype.calcRepulsionRange=function(){return 0},e.exports=l}),(function(e,t,n){"use strict";var r=n(1),i=n(7);function a(e,t,n){r.call(this,e,t,n),this.idealLength=i.DEFAULT_EDGE_LENGTH}for(var o in a.prototype=Object.create(r.prototype),r)a[o]=r[o];e.exports=a}),(function(e,t,n){"use strict";var r=n(3);function i(e,t,n,i){r.call(this,e,t,n,i),this.springForceX=0,this.springForceY=0,this.repulsionForceX=0,this.repulsionForceY=0,this.gravitationForceX=0,this.gravitationForceY=0,this.displacementX=0,this.displacementY=0,this.startX=0,this.finishX=0,this.startY=0,this.finishY=0,this.surrounding=[]}for(var a in i.prototype=Object.create(r.prototype),r)i[a]=r[a];i.prototype.setGridCoordinates=function(e,t,n,r){this.startX=e,this.finishX=t,this.startY=n,this.finishY=r},e.exports=i}),(function(e,t,n){"use strict";function r(e,t){this.width=0,this.height=0,e!==null&&t!==null&&(this.height=t,this.width=e)}r.prototype.getWidth=function(){return this.width},r.prototype.setWidth=function(e){this.width=e},r.prototype.getHeight=function(){return this.height},r.prototype.setHeight=function(e){this.height=e},e.exports=r}),(function(e,t,n){"use strict";var r=n(14);function i(){this.map={},this.keys=[]}i.prototype.put=function(e,t){var n=r.createID(e);this.contains(n)||(this.map[n]=t,this.keys.push(e))},i.prototype.contains=function(e){return r.createID(e),this.map[e]!=null},i.prototype.get=function(e){var t=r.createID(e);return this.map[t]},i.prototype.keySet=function(){return this.keys},e.exports=i}),(function(e,t,n){"use strict";var r=n(14);function i(){this.set={}}i.prototype.add=function(e){var t=r.createID(e);this.contains(t)||(this.set[t]=e)},i.prototype.remove=function(e){delete this.set[r.createID(e)]},i.prototype.clear=function(){this.set={}},i.prototype.contains=function(e){return this.set[r.createID(e)]==e},i.prototype.isEmpty=function(){return this.size()===0},i.prototype.size=function(){return Object.keys(this.set).length},i.prototype.addAllTo=function(e){for(var t=Object.keys(this.set),n=t.length,r=0;r<n;r++)e.push(this.set[t[r]])},i.prototype.size=function(){return Object.keys(this.set).length},i.prototype.addAll=function(e){for(var t=e.length,n=0;n<t;n++){var r=e[n];this.add(r)}},e.exports=i}),(function(e,t,n){"use strict";var r=function(){function e(e,t){for(var n=0;n<t.length;n++){var r=t[n];r.enumerable=r.enumerable||!1,r.configurable=!0,`value`in r&&(r.writable=!0),Object.defineProperty(e,r.key,r)}}return function(t,n,r){return n&&e(t.prototype,n),r&&e(t,r),t}}();function i(e,t){if(!(e instanceof t))throw TypeError(`Cannot call a class as a function`)}var a=n(11);e.exports=function(){function e(t,n){i(this,e),(n!==null||n!==void 0)&&(this.compareFunction=this._defaultCompareFunction);var r=void 0;r=t instanceof a?t.size():t.length,this._quicksort(t,0,r-1)}return r(e,[{key:`_quicksort`,value:function(e,t,n){if(t<n){var r=this._partition(e,t,n);this._quicksort(e,t,r),this._quicksort(e,r+1,n)}}},{key:`_partition`,value:function(e,t,n){for(var r=this._get(e,t),i=t,a=n;;){for(;this.compareFunction(r,this._get(e,a));)a--;for(;this.compareFunction(this._get(e,i),r);)i++;if(i<a)this._swap(e,i,a),i++,a--;else return a}}},{key:`_get`,value:function(e,t){return e instanceof a?e.get_object_at(t):e[t]}},{key:`_set`,value:function(e,t,n){e instanceof a?e.set_object_at(t,n):e[t]=n}},{key:`_swap`,value:function(e,t,n){var r=this._get(e,t);this._set(e,t,this._get(e,n)),this._set(e,n,r)}},{key:`_defaultCompareFunction`,value:function(e,t){return t>e}}]),e}()}),(function(e,t,n){"use strict";var r=function(){function e(e,t){for(var n=0;n<t.length;n++){var r=t[n];r.enumerable=r.enumerable||!1,r.configurable=!0,`value`in r&&(r.writable=!0),Object.defineProperty(e,r.key,r)}}return function(t,n,r){return n&&e(t.prototype,n),r&&e(t,r),t}}();function i(e,t){if(!(e instanceof t))throw TypeError(`Cannot call a class as a function`)}e.exports=function(){function e(t,n){var r=arguments.length>2&&arguments[2]!==void 0?arguments[2]:1,a=arguments.length>3&&arguments[3]!==void 0?arguments[3]:-1,o=arguments.length>4&&arguments[4]!==void 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0;i=this.sequence1[n-1]===this.sequence2[r-1]?this.grid[n-1][r-1]+this.match_score:this.grid[n-1][r-1]+this.mismatch_penalty;var a=this.grid[n-1][r]+this.gap_penalty,o=this.grid[n][r-1]+this.gap_penalty,s=[i,a,o],c=this.arrayAllMaxIndexes(s);this.grid[n][r]=s[c[0]],this.tracebackGrid[n][r]=[c.includes(0),c.includes(1),c.includes(2)]}this.score=this.grid[this.iMax-1][this.jMax-1]}},{key:`alignmentTraceback`,value:function(){var e=[];for(e.push({pos:[this.sequence1.length,this.sequence2.length],seq1:``,seq2:``});e[0];){var t=e[0],n=this.tracebackGrid[t.pos[0]][t.pos[1]];n[0]&&e.push({pos:[t.pos[0]-1,t.pos[1]-1],seq1:this.sequence1[t.pos[0]-1]+t.seq1,seq2:this.sequence2[t.pos[1]-1]+t.seq2}),n[1]&&e.push({pos:[t.pos[0]-1,t.pos[1]],seq1:this.sequence1[t.pos[0]-1]+t.seq1,seq2:`-`+t.seq2}),n[2]&&e.push({pos:[t.pos[0],t.pos[1]-1],seq1:`-`+t.seq1,seq2:this.sequence2[t.pos[1]-1]+t.seq2}),t.pos[0]===0&&t.pos[1]===0&&this.alignments.push({sequence1:t.seq1,sequence2:t.seq2}),e.shift()}return this.alignments}},{key:`getAllIndexes`,value:function(e,t){for(var n=[],r=-1;(r=e.indexOf(t,r+1))!==-1;)n.push(r);return n}},{key:`arrayAllMaxIndexes`,value:function(e){return this.getAllIndexes(e,Math.max.apply(null,e))}}]),e}()}),(function(e,t,n){"use strict";var r=function(){};r.FDLayout=n(18),r.FDLayoutConstants=n(7),r.FDLayoutEdge=n(19),r.FDLayoutNode=n(20),r.DimensionD=n(21),r.HashMap=n(22),r.HashSet=n(23),r.IGeometry=n(8),r.IMath=n(9),r.Integer=n(10),r.Point=n(12),r.PointD=n(4),r.RandomSeed=n(16),r.RectangleD=n(13),r.Transform=n(17),r.UniqueIDGeneretor=n(14),r.Quicksort=n(24),r.LinkedList=n(11),r.LGraphObject=n(2),r.LGraph=n(5),r.LEdge=n(1),r.LGraphManager=n(6),r.LNode=n(3),r.Layout=n(15),r.LayoutConstants=n(0),r.NeedlemanWunsch=n(25),e.exports=r}),(function(e,t,n){"use strict";function r(){this.listeners=[]}var i=r.prototype;i.addListener=function(e,t){this.listeners.push({event:e,callback:t})},i.removeListener=function(e,t){for(var n=this.listeners.length;n>=0;n--){var r=this.listeners[n];r.event===e&&r.callback===t&&this.listeners.splice(n,1)}},i.emit=function(e,t){for(var n=0;n<this.listeners.length;n++){var r=this.listeners[n];e===r.event&&r.callback(t)}},e.exports=r})])})})),r=e.y(((e,t)=>{(function(r,i){typeof e==`object`&&typeof t==`object`?t.exports=i(n()):typeof define==`function`&&define.amd?define([`layout-base`],i):typeof e==`object`?e.coseBase=i(n()):r.coseBase=i(r.layoutBase)})(e,function(e){return(function(e){var t={};function n(r){if(t[r])return t[r].exports;var i=t[r]={i:r,l:!1,exports:{}};return e[r].call(i.exports,i,i.exports,n),i.l=!0,i.exports}return n.m=e,n.c=t,n.i=function(e){return e},n.d=function(e,t,r){n.o(e,t)||Object.defineProperty(e,t,{configurable:!1,enumerable:!0,get:r})},n.n=function(e){var t=e&&e.__esModule?function(){return e.default}:function(){return e};return n.d(t,`a`,t),t},n.o=function(e,t){return Object.prototype.hasOwnProperty.call(e,t)},n.p=``,n(n.s=7)})([(function(t,n){t.exports=e}),(function(e,t,n){"use strict";var r=n(0).FDLayoutConstants;function i(){}for(var a in r)i[a]=r[a];i.DEFAULT_USE_MULTI_LEVEL_SCALING=!1,i.DEFAULT_RADIAL_SEPARATION=r.DEFAULT_EDGE_LENGTH,i.DEFAULT_COMPONENT_SEPERATION=60,i.TILE=!0,i.TILING_PADDING_VERTICAL=10,i.TILING_PADDING_HORIZONTAL=10,i.TREE_REDUCTION_ON_INCREMENTAL=!1,e.exports=i}),(function(e,t,n){"use strict";var r=n(0).FDLayoutEdge;function i(e,t,n){r.call(this,e,t,n)}for(var a in i.prototype=Object.create(r.prototype),r)i[a]=r[a];e.exports=i}),(function(e,t,n){"use strict";var r=n(0).LGraph;function i(e,t,n){r.call(this,e,t,n)}for(var a in i.prototype=Object.create(r.prototype),r)i[a]=r[a];e.exports=i}),(function(e,t,n){"use strict";var r=n(0).LGraphManager;function i(e){r.call(this,e)}for(var a in i.prototype=Object.create(r.prototype),r)i[a]=r[a];e.exports=i}),(function(e,t,n){"use strict";var r=n(0).FDLayoutNode,i=n(0).IMath;function a(e,t,n,i){r.call(this,e,t,n,i)}for(var o in a.prototype=Object.create(r.prototype),r)a[o]=r[o];a.prototype.move=function(){var e=this.graphManager.getLayout();this.displacementX=e.coolingFactor*(this.springForceX+this.repulsionForceX+this.gravitationForceX)/this.noOfChildren,this.displacementY=e.coolingFactor*(this.springForceY+this.repulsionForceY+this.gravitationForceY)/this.noOfChildren,Math.abs(this.displacementX)>e.coolingFactor*e.maxNodeDisplacement&&(this.displacementX=e.coolingFactor*e.maxNodeDisplacement*i.sign(this.displacementX)),Math.abs(this.displacementY)>e.coolingFactor*e.maxNodeDisplacement&&(this.displacementY=e.coolingFactor*e.maxNodeDisplacement*i.sign(this.displacementY)),this.child==null||this.child.getNodes().length==0?this.moveBy(this.displacementX,this.displacementY):this.propogateDisplacementToChildren(this.displacementX,this.displacementY),e.totalDisplacement+=Math.abs(this.displacementX)+Math.abs(this.displacementY),this.springForceX=0,this.springForceY=0,this.repulsionForceX=0,this.repulsionForceY=0,this.gravitationForceX=0,this.gravitationForceY=0,this.displacementX=0,this.displacementY=0},a.prototype.propogateDisplacementToChildren=function(e,t){for(var n=this.getChild().getNodes(),r,i=0;i<n.length;i++)r=n[i],r.getChild()==null?(r.moveBy(e,t),r.displacementX+=e,r.displacementY+=t):r.propogateDisplacementToChildren(e,t)},a.prototype.setPred1=function(e){this.pred1=e},a.prototype.getPred1=function(){return pred1},a.prototype.getPred2=function(){return pred2},a.prototype.setNext=function(e){this.next=e},a.prototype.getNext=function(){return next},a.prototype.setProcessed=function(e){this.processed=e},a.prototype.isProcessed=function(){return processed},e.exports=a}),(function(e,t,n){"use strict";var r=n(0).FDLayout,i=n(4),a=n(3),o=n(5),s=n(2),c=n(1),l=n(0).FDLayoutConstants,u=n(0).LayoutConstants,d=n(0).Point,f=n(0).PointD,p=n(0).Layout,m=n(0).Integer,h=n(0).IGeometry,g=n(0).LGraph,_=n(0).Transform;function v(){r.call(this),this.toBeTiled={}}for(var y in v.prototype=Object.create(r.prototype),r)v[y]=r[y];v.prototype.newGraphManager=function(){var e=new i(this);return this.graphManager=e,e},v.prototype.newGraph=function(e){return new a(null,this.graphManager,e)},v.prototype.newNode=function(e){return new o(this.graphManager,e)},v.prototype.newEdge=function(e){return new s(null,null,e)},v.prototype.initParameters=function(){r.prototype.initParameters.call(this,arguments),this.isSubLayout||(c.DEFAULT_EDGE_LENGTH<10?this.idealEdgeLength=10:this.idealEdgeLength=c.DEFAULT_EDGE_LENGTH,this.useSmartIdealEdgeLengthCalculation=c.DEFAULT_USE_SMART_IDEAL_EDGE_LENGTH_CALCULATION,this.springConstant=l.DEFAULT_SPRING_STRENGTH,this.repulsionConstant=l.DEFAULT_REPULSION_STRENGTH,this.gravityConstant=l.DEFAULT_GRAVITY_STRENGTH,this.compoundGravityConstant=l.DEFAULT_COMPOUND_GRAVITY_STRENGTH,this.gravityRangeFactor=l.DEFAULT_GRAVITY_RANGE_FACTOR,this.compoundGravityRangeFactor=l.DEFAULT_COMPOUND_GRAVITY_RANGE_FACTOR,this.prunedNodesAll=[],this.growTreeIterations=0,this.afterGrowthIterations=0,this.isTreeGrowing=!1,this.isGrowthFinished=!1,this.coolingCycle=0,this.maxCoolingCycle=this.maxIterations/l.CONVERGENCE_CHECK_PERIOD,this.finalTemperature=l.CONVERGENCE_CHECK_PERIOD/this.maxIterations,this.coolingAdjuster=1)},v.prototype.layout=function(){return u.DEFAULT_CREATE_BENDS_AS_NEEDED&&(this.createBendpoints(),this.graphManager.resetAllEdges()),this.level=0,this.classicLayout()},v.prototype.classicLayout=function(){if(this.nodesWithGravity=this.calculateNodesToApplyGravitationTo(),this.graphManager.setAllNodesToApplyGravitation(this.nodesWithGravity),this.calcNoOfChildrenForAllNodes(),this.graphManager.calcLowestCommonAncestors(),this.graphManager.calcInclusionTreeDepths(),this.graphManager.getRoot().calcEstimatedSize(),this.calcIdealEdgeLengths(),!this.incremental){var e=this.getFlatForest();if(e.length>0)this.positionNodesRadially(e);else{this.reduceTrees(),this.graphManager.resetAllNodesToApplyGravitation();var t=new Set(this.getAllNodes()),n=this.nodesWithGravity.filter(function(e){return t.has(e)});this.graphManager.setAllNodesToApplyGravitation(n),this.positionNodesRandomly()}}else if(c.TREE_REDUCTION_ON_INCREMENTAL){this.reduceTrees(),this.graphManager.resetAllNodesToApplyGravitation();var t=new Set(this.getAllNodes()),n=this.nodesWithGravity.filter(function(e){return t.has(e)});this.graphManager.setAllNodesToApplyGravitation(n)}return this.initSpringEmbedder(),this.runSpringEmbedder(),!0},v.prototype.tick=function(){if(this.totalIterations++,this.totalIterations===this.maxIterations&&!this.isTreeGrowing&&!this.isGrowthFinished)if(this.prunedNodesAll.length>0)this.isTreeGrowing=!0;else return!0;if(this.totalIterations%l.CONVERGENCE_CHECK_PERIOD==0&&!this.isTreeGrowing&&!this.isGrowthFinished){if(this.isConverged())if(this.prunedNodesAll.length>0)this.isTreeGrowing=!0;else return!0;this.coolingCycle++,this.layoutQuality==0?this.coolingAdjuster=this.coolingCycle:this.layoutQuality==1&&(this.coolingAdjuster=this.coolingCycle/3),this.coolingFactor=Math.max(this.initialCoolingFactor-this.coolingCycle**+(Math.log(100*(this.initialCoolingFactor-this.finalTemperature))/Math.log(this.maxCoolingCycle))/100*this.coolingAdjuster,this.finalTemperature),this.animationPeriod=Math.ceil(this.initialAnimationPeriod*Math.sqrt(this.coolingFactor))}if(this.isTreeGrowing){if(this.growTreeIterations%10==0)if(this.prunedNodesAll.length>0){this.graphManager.updateBounds(),this.updateGrid(),this.growTree(this.prunedNodesAll),this.graphManager.resetAllNodesToApplyGravitation();var e=new Set(this.getAllNodes()),t=this.nodesWithGravity.filter(function(t){return e.has(t)});this.graphManager.setAllNodesToApplyGravitation(t),this.graphManager.updateBounds(),this.updateGrid(),this.coolingFactor=l.DEFAULT_COOLING_FACTOR_INCREMENTAL}else this.isTreeGrowing=!1,this.isGrowthFinished=!0;this.growTreeIterations++}if(this.isGrowthFinished){if(this.isConverged())return!0;this.afterGrowthIterations%10==0&&(this.graphManager.updateBounds(),this.updateGrid()),this.coolingFactor=l.DEFAULT_COOLING_FACTOR_INCREMENTAL*((100-this.afterGrowthIterations)/100),this.afterGrowthIterations++}var n=!this.isTreeGrowing&&!this.isGrowthFinished,r=this.growTreeIterations%10==1&&this.isTreeGrowing||this.afterGrowthIterations%10==1&&this.isGrowthFinished;return this.totalDisplacement=0,this.graphManager.updateBounds(),this.calcSpringForces(),this.calcRepulsionForces(n,r),this.calcGravitationalForces(),this.moveNodes(),this.animate(),!1},v.prototype.getPositionsData=function(){for(var e=this.graphManager.getAllNodes(),t={},n=0;n<e.length;n++){var r=e[n].rect,i=e[n].id;t[i]={id:i,x:r.getCenterX(),y:r.getCenterY(),w:r.width,h:r.height}}return t},v.prototype.runSpringEmbedder=function(){this.initialAnimationPeriod=25,this.animationPeriod=this.initialAnimationPeriod;var e=!1;if(l.ANIMATE===`during`)this.emit(`layoutstarted`);else{for(;!e;)e=this.tick();this.graphManager.updateBounds()}},v.prototype.calculateNodesToApplyGravitationTo=function(){var e=[],t,n=this.graphManager.getGraphs(),r=n.length,i;for(i=0;i<r;i++)t=n[i],t.updateConnected(),t.isConnected||(e=e.concat(t.getNodes()));return e},v.prototype.createBendpoints=function(){var e=[];e=e.concat(this.graphManager.getAllEdges());var t=new Set,n;for(n=0;n<e.length;n++){var r=e[n];if(!t.has(r)){var i=r.getSource(),a=r.getTarget();if(i==a)r.getBendpoints().push(new f),r.getBendpoints().push(new f),this.createDummyNodesForBendpoints(r),t.add(r);else{var o=[];if(o=o.concat(i.getEdgeListToNode(a)),o=o.concat(a.getEdgeListToNode(i)),!t.has(o[0])){if(o.length>1){var s;for(s=0;s<o.length;s++){var c=o[s];c.getBendpoints().push(new f),this.createDummyNodesForBendpoints(c)}}o.forEach(function(e){t.add(e)})}}}if(t.size==e.length)break}},v.prototype.positionNodesRadially=function(e){for(var t=new d(0,0),n=Math.ceil(Math.sqrt(e.length)),r=0,i=0,a=0,o=new f(0,0),s=0;s<e.length;s++){s%n==0&&(a=0,i=r,s!=0&&(i+=c.DEFAULT_COMPONENT_SEPERATION),r=0);var l=e[s],m=p.findCenterOfTree(l);t.x=a,t.y=i,o=v.radialLayout(l,m,t),o.y>r&&(r=Math.floor(o.y)),a=Math.floor(o.x+c.DEFAULT_COMPONENT_SEPERATION)}this.transform(new f(u.WORLD_CENTER_X-o.x/2,u.WORLD_CENTER_Y-o.y/2))},v.radialLayout=function(e,t,n){var r=Math.max(this.maxDiagonalInTree(e),c.DEFAULT_RADIAL_SEPARATION);v.branchRadialLayout(t,null,0,359,0,r);var i=g.calculateBounds(e),a=new _;a.setDeviceOrgX(i.getMinX()),a.setDeviceOrgY(i.getMinY()),a.setWorldOrgX(n.x),a.setWorldOrgY(n.y);for(var o=0;o<e.length;o++)e[o].transform(a);var s=new f(i.getMaxX(),i.getMaxY());return a.inverseTransformPoint(s)},v.branchRadialLayout=function(e,t,n,r,i,a){var o=(r-n+1)/2;o<0&&(o+=180);var s=(o+n)%360*h.TWO_PI/360,c=i*Math.cos(s),l=i*Math.sin(s);e.setCenter(c,l);var u=[];u=u.concat(e.getEdges());var d=u.length;t!=null&&d--;for(var f=0,p=u.length,m,g=e.getEdgesBetween(t);g.length>1;){var _=g[0];g.splice(0,1);var y=u.indexOf(_);y>=0&&u.splice(y,1),p--,d--}m=t==null?0:(u.indexOf(g[0])+1)%p;for(var b=Math.abs(r-n)/d,x=m;f!=d;x=++x%p){var S=u[x].getOtherEnd(e);if(S!=t){var C=(n+f*b)%360,w=(C+b)%360;v.branchRadialLayout(S,e,C,w,i+a,a),f++}}},v.maxDiagonalInTree=function(e){for(var t=m.MIN_VALUE,n=0;n<e.length;n++){var r=e[n].getDiagonal();r>t&&(t=r)}return t},v.prototype.calcRepulsionRange=function(){return 2*(this.level+1)*this.idealEdgeLength},v.prototype.groupZeroDegreeMembers=function(){var e=this,t={};this.memberGroups={},this.idToDummyNode={};for(var n=[],r=this.graphManager.getAllNodes(),i=0;i<r.length;i++){var a=r[i],s=a.getParent();this.getNodeDegreeWithChildren(a)===0&&(s.id==null||!this.getToBeTiled(s))&&n.push(a)}for(var i=0;i<n.length;i++){var a=n[i],c=a.getParent().id;t[c]===void 0&&(t[c]=[]),t[c]=t[c].concat(a)}Object.keys(t).forEach(function(n){if(t[n].length>1){var r=`DummyCompound_`+n;e.memberGroups[r]=t[n];var i=t[n][0].getParent(),a=new o(e.graphManager);a.id=r,a.paddingLeft=i.paddingLeft||0,a.paddingRight=i.paddingRight||0,a.paddingBottom=i.paddingBottom||0,a.paddingTop=i.paddingTop||0,e.idToDummyNode[r]=a;var s=e.getGraphManager().add(e.newGraph(),a),c=i.getChild();c.add(a);for(var l=0;l<t[n].length;l++){var u=t[n][l];c.remove(u),s.add(u)}}})},v.prototype.clearCompounds=function(){var e={},t={};this.performDFSOnCompounds();for(var n=0;n<this.compoundOrder.length;n++)t[this.compoundOrder[n].id]=this.compoundOrder[n],e[this.compoundOrder[n].id]=[].concat(this.compoundOrder[n].getChild().getNodes()),this.graphManager.remove(this.compoundOrder[n].getChild()),this.compoundOrder[n].child=null;this.graphManager.resetAllNodes(),this.tileCompoundMembers(e,t)},v.prototype.clearZeroDegreeMembers=function(){var e=this,t=this.tiledZeroDegreePack=[];Object.keys(this.memberGroups).forEach(function(n){var r=e.idToDummyNode[n];t[n]=e.tileNodes(e.memberGroups[n],r.paddingLeft+r.paddingRight),r.rect.width=t[n].width,r.rect.height=t[n].height})},v.prototype.repopulateCompounds=function(){for(var e=this.compoundOrder.length-1;e>=0;e--){var t=this.compoundOrder[e],n=t.id,r=t.paddingLeft,i=t.paddingTop;this.adjustLocations(this.tiledMemberPack[n],t.rect.x,t.rect.y,r,i)}},v.prototype.repopulateZeroDegreeMembers=function(){var e=this,t=this.tiledZeroDegreePack;Object.keys(t).forEach(function(n){var r=e.idToDummyNode[n],i=r.paddingLeft,a=r.paddingTop;e.adjustLocations(t[n],r.rect.x,r.rect.y,i,a)})},v.prototype.getToBeTiled=function(e){var t=e.id;if(this.toBeTiled[t]!=null)return this.toBeTiled[t];var n=e.getChild();if(n==null)return this.toBeTiled[t]=!1,!1;for(var r=n.getNodes(),i=0;i<r.length;i++){var a=r[i];if(this.getNodeDegree(a)>0)return this.toBeTiled[t]=!1,!1;if(a.getChild()==null){this.toBeTiled[a.id]=!1;continue}if(!this.getToBeTiled(a))return this.toBeTiled[t]=!1,!1}return this.toBeTiled[t]=!0,!0},v.prototype.getNodeDegree=function(e){e.id;for(var t=e.getEdges(),n=0,r=0;r<t.length;r++){var i=t[r];i.getSource().id!==i.getTarget().id&&(n+=1)}return n},v.prototype.getNodeDegreeWithChildren=function(e){var t=this.getNodeDegree(e);if(e.getChild()==null)return t;for(var n=e.getChild().getNodes(),r=0;r<n.length;r++){var i=n[r];t+=this.getNodeDegreeWithChildren(i)}return t},v.prototype.performDFSOnCompounds=function(){this.compoundOrder=[],this.fillCompexOrderByDFS(this.graphManager.getRoot().getNodes())},v.prototype.fillCompexOrderByDFS=function(e){for(var t=0;t<e.length;t++){var n=e[t];n.getChild()!=null&&this.fillCompexOrderByDFS(n.getChild().getNodes()),this.getToBeTiled(n)&&this.compoundOrder.push(n)}},v.prototype.adjustLocations=function(e,t,n,r,i){t+=r,n+=i;for(var a=t,o=0;o<e.rows.length;o++){var s=e.rows[o];t=a;for(var c=0,l=0;l<s.length;l++){var u=s[l];u.rect.x=t,u.rect.y=n,t+=u.rect.width+e.horizontalPadding,u.rect.height>c&&(c=u.rect.height)}n+=c+e.verticalPadding}},v.prototype.tileCompoundMembers=function(e,t){var n=this;this.tiledMemberPack=[],Object.keys(e).forEach(function(r){var i=t[r];n.tiledMemberPack[r]=n.tileNodes(e[r],i.paddingLeft+i.paddingRight),i.rect.width=n.tiledMemberPack[r].width,i.rect.height=n.tiledMemberPack[r].height})},v.prototype.tileNodes=function(e,t){var n={rows:[],rowWidth:[],rowHeight:[],width:0,height:t,verticalPadding:c.TILING_PADDING_VERTICAL,horizontalPadding:c.TILING_PADDING_HORIZONTAL};e.sort(function(e,t){return e.rect.width*e.rect.height>t.rect.width*t.rect.height?-1:+(e.rect.width*e.rect.height<t.rect.width*t.rect.height)});for(var r=0;r<e.length;r++){var i=e[r];n.rows.length==0?this.insertNodeToRow(n,i,0,t):this.canAddHorizontal(n,i.rect.width,i.rect.height)?this.insertNodeToRow(n,i,this.getShortestRowIndex(n),t):this.insertNodeToRow(n,i,n.rows.length,t),this.shiftToLastRow(n)}return n},v.prototype.insertNodeToRow=function(e,t,n,r){var i=r;n==e.rows.length&&(e.rows.push([]),e.rowWidth.push(i),e.rowHeight.push(0));var a=e.rowWidth[n]+t.rect.width;e.rows[n].length>0&&(a+=e.horizontalPadding),e.rowWidth[n]=a,e.width<a&&(e.width=a);var o=t.rect.height;n>0&&(o+=e.verticalPadding);var s=0;o>e.rowHeight[n]&&(s=e.rowHeight[n],e.rowHeight[n]=o,s=e.rowHeight[n]-s),e.height+=s,e.rows[n].push(t)},v.prototype.getShortestRowIndex=function(e){for(var t=-1,n=Number.MAX_VALUE,r=0;r<e.rows.length;r++)e.rowWidth[r]<n&&(t=r,n=e.rowWidth[r]);return t},v.prototype.getLongestRowIndex=function(e){for(var t=-1,n=Number.MIN_VALUE,r=0;r<e.rows.length;r++)e.rowWidth[r]>n&&(t=r,n=e.rowWidth[r]);return t},v.prototype.canAddHorizontal=function(e,t,n){var r=this.getShortestRowIndex(e);if(r<0)return!0;var i=e.rowWidth[r];if(i+e.horizontalPadding+t<=e.width)return!0;var a=0;e.rowHeight[r]<n&&r>0&&(a=n+e.verticalPadding-e.rowHeight[r]);var o=e.width-i>=t+e.horizontalPadding?(e.height+a)/(i+t+e.horizontalPadding):(e.height+a)/e.width;a=n+e.verticalPadding;var s=e.width<t?(e.height+a)/t:(e.height+a)/e.width;return s<1&&(s=1/s),o<1&&(o=1/o),o<s},v.prototype.shiftToLastRow=function(e){var t=this.getLongestRowIndex(e),n=e.rowWidth.length-1,r=e.rows[t],i=r[r.length-1],a=i.width+e.horizontalPadding;if(e.width-e.rowWidth[n]>a&&t!=n){r.splice(-1,1),e.rows[n].push(i),e.rowWidth[t]=e.rowWidth[t]-a,e.rowWidth[n]=e.rowWidth[n]+a,e.width=e.rowWidth[instance.getLongestRowIndex(e)];for(var o=Number.MIN_VALUE,s=0;s<r.length;s++)r[s].height>o&&(o=r[s].height);t>0&&(o+=e.verticalPadding);var c=e.rowHeight[t]+e.rowHeight[n];e.rowHeight[t]=o,e.rowHeight[n]<i.height+e.verticalPadding&&(e.rowHeight[n]=i.height+e.verticalPadding);var l=e.rowHeight[t]+e.rowHeight[n];e.height+=l-c,this.shiftToLastRow(e)}},v.prototype.tilingPreLayout=function(){c.TILE&&(this.groupZeroDegreeMembers(),this.clearCompounds(),this.clearZeroDegreeMembers())},v.prototype.tilingPostLayout=function(){c.TILE&&(this.repopulateZeroDegreeMembers(),this.repopulateCompounds())},v.prototype.reduceTrees=function(){for(var e=[],t=!0,n;t;){var r=this.graphManager.getAllNodes(),i=[];t=!1;for(var a=0;a<r.length;a++)n=r[a],n.getEdges().length==1&&!n.getEdges()[0].isInterGraph&&n.getChild()==null&&(i.push([n,n.getEdges()[0],n.getOwner()]),t=!0);if(t==1){for(var o=[],s=0;s<i.length;s++)i[s][0].getEdges().length==1&&(o.push(i[s]),i[s][0].getOwner().remove(i[s][0]));e.push(o),this.graphManager.resetAllNodes(),this.graphManager.resetAllEdges()}}this.prunedNodesAll=e},v.prototype.growTree=function(e){for(var t=e[e.length-1],n,r=0;r<t.length;r++)n=t[r],this.findPlaceforPrunedNode(n),n[2].add(n[0]),n[2].add(n[1],n[1].source,n[1].target);e.splice(e.length-1,1),this.graphManager.resetAllNodes(),this.graphManager.resetAllEdges()},v.prototype.findPlaceforPrunedNode=function(e){var t,n,r=e[0];n=r==e[1].source?e[1].target:e[1].source;var i=n.startX,a=n.finishX,o=n.startY,s=n.finishY,c=[0,0,0,0];if(o>0)for(var u=i;u<=a;u++)c[0]+=this.grid[u][o-1].length+this.grid[u][o].length-1;if(a<this.grid.length-1)for(var u=o;u<=s;u++)c[1]+=this.grid[a+1][u].length+this.grid[a][u].length-1;if(s<this.grid[0].length-1)for(var u=i;u<=a;u++)c[2]+=this.grid[u][s+1].length+this.grid[u][s].length-1;if(i>0)for(var u=o;u<=s;u++)c[3]+=this.grid[i-1][u].length+this.grid[i][u].length-1;for(var d=m.MAX_VALUE,f,p,h=0;h<c.length;h++)c[h]<d?(d=c[h],f=1,p=h):c[h]==d&&f++;if(f==3&&d==0)c[0]==0&&c[1]==0&&c[2]==0?t=1:c[0]==0&&c[1]==0&&c[3]==0?t=0:c[0]==0&&c[2]==0&&c[3]==0?t=3:c[1]==0&&c[2]==0&&c[3]==0&&(t=2);else if(f==2&&d==0){var g=Math.floor(Math.random()*2);t=c[0]==0&&c[1]==0?g==0?0:1:c[0]==0&&c[2]==0?g==0?0:2:c[0]==0&&c[3]==0?g==0?0:3:c[1]==0&&c[2]==0?g==0?1:2:c[1]==0&&c[3]==0?g==0?1:3:g==0?2:3}else if(f==4&&d==0){var g=Math.floor(Math.random()*4);t=g}else t=p;t==0?r.setCenter(n.getCenterX(),n.getCenterY()-n.getHeight()/2-l.DEFAULT_EDGE_LENGTH-r.getHeight()/2):t==1?r.setCenter(n.getCenterX()+n.getWidth()/2+l.DEFAULT_EDGE_LENGTH+r.getWidth()/2,n.getCenterY()):t==2?r.setCenter(n.getCenterX(),n.getCenterY()+n.getHeight()/2+l.DEFAULT_EDGE_LENGTH+r.getHeight()/2):r.setCenter(n.getCenterX()-n.getWidth()/2-l.DEFAULT_EDGE_LENGTH-r.getWidth()/2,n.getCenterY())},e.exports=v}),(function(e,t,n){"use strict";var r={};r.layoutBase=n(0),r.CoSEConstants=n(1),r.CoSEEdge=n(2),r.CoSEGraph=n(3),r.CoSEGraphManager=n(4),r.CoSELayout=n(6),r.CoSENode=n(5),e.exports=r})])})})),i=e.y(((e,t)=>{(function(n,i){typeof e==`object`&&typeof t==`object`?t.exports=i(r()):typeof define==`function`&&define.amd?define([`cose-base`],i):typeof e==`object`?e.cytoscapeCoseBilkent=i(r()):n.cytoscapeCoseBilkent=i(n.coseBase)})(e,function(e){return(function(e){var t={};function n(r){if(t[r])return t[r].exports;var i=t[r]={i:r,l:!1,exports:{}};return e[r].call(i.exports,i,i.exports,n),i.l=!0,i.exports}return n.m=e,n.c=t,n.i=function(e){return e},n.d=function(e,t,r){n.o(e,t)||Object.defineProperty(e,t,{configurable:!1,enumerable:!0,get:r})},n.n=function(e){var t=e&&e.__esModule?function(){return e.default}:function(){return e};return n.d(t,`a`,t),t},n.o=function(e,t){return Object.prototype.hasOwnProperty.call(e,t)},n.p=``,n(n.s=1)})([(function(t,n){t.exports=e}),(function(e,t,n){"use strict";var r=n(0).layoutBase.LayoutConstants,i=n(0).layoutBase.FDLayoutConstants,a=n(0).CoSEConstants,o=n(0).CoSELayout,s=n(0).CoSENode,c=n(0).layoutBase.PointD,l=n(0).layoutBase.DimensionD,u={ready:function(){},stop:function(){},quality:`default`,nodeDimensionsIncludeLabels:!1,refresh:30,fit:!0,padding:10,randomize:!0,nodeRepulsion:4500,idealEdgeLength:50,edgeElasticity:.45,nestingFactor:.1,gravity:.25,numIter:2500,tile:!0,animate:`end`,animationDuration:500,tilingPaddingVertical:10,tilingPaddingHorizontal:10,gravityRangeCompound:1.5,gravityCompound:1,gravityRange:3.8,initialEnergyOnIncremental:.5};function d(e,t){var n={};for(var r in e)n[r]=e[r];for(var r in t)n[r]=t[r];return n}function f(e){this.options=d(u,e),p(this.options)}var p=function(e){e.nodeRepulsion!=null&&(a.DEFAULT_REPULSION_STRENGTH=i.DEFAULT_REPULSION_STRENGTH=e.nodeRepulsion),e.idealEdgeLength!=null&&(a.DEFAULT_EDGE_LENGTH=i.DEFAULT_EDGE_LENGTH=e.idealEdgeLength),e.edgeElasticity!=null&&(a.DEFAULT_SPRING_STRENGTH=i.DEFAULT_SPRING_STRENGTH=e.edgeElasticity),e.nestingFactor!=null&&(a.PER_LEVEL_IDEAL_EDGE_LENGTH_FACTOR=i.PER_LEVEL_IDEAL_EDGE_LENGTH_FACTOR=e.nestingFactor),e.gravity!=null&&(a.DEFAULT_GRAVITY_STRENGTH=i.DEFAULT_GRAVITY_STRENGTH=e.gravity),e.numIter!=null&&(a.MAX_ITERATIONS=i.MAX_ITERATIONS=e.numIter),e.gravityRange!=null&&(a.DEFAULT_GRAVITY_RANGE_FACTOR=i.DEFAULT_GRAVITY_RANGE_FACTOR=e.gravityRange),e.gravityCompound!=null&&(a.DEFAULT_COMPOUND_GRAVITY_STRENGTH=i.DEFAULT_COMPOUND_GRAVITY_STRENGTH=e.gravityCompound),e.gravityRangeCompound!=null&&(a.DEFAULT_COMPOUND_GRAVITY_RANGE_FACTOR=i.DEFAULT_COMPOUND_GRAVITY_RANGE_FACTOR=e.gravityRangeCompound),e.initialEnergyOnIncremental!=null&&(a.DEFAULT_COOLING_FACTOR_INCREMENTAL=i.DEFAULT_COOLING_FACTOR_INCREMENTAL=e.initialEnergyOnIncremental),e.quality==`draft`?r.QUALITY=0:e.quality==`proof`?r.QUALITY=2:r.QUALITY=1,a.NODE_DIMENSIONS_INCLUDE_LABELS=i.NODE_DIMENSIONS_INCLUDE_LABELS=r.NODE_DIMENSIONS_INCLUDE_LABELS=e.nodeDimensionsIncludeLabels,a.DEFAULT_INCREMENTAL=i.DEFAULT_INCREMENTAL=r.DEFAULT_INCREMENTAL=!e.randomize,a.ANIMATE=i.ANIMATE=r.ANIMATE=e.animate,a.TILE=e.tile,a.TILING_PADDING_VERTICAL=typeof e.tilingPaddingVertical==`function`?e.tilingPaddingVertical.call():e.tilingPaddingVertical,a.TILING_PADDING_HORIZONTAL=typeof e.tilingPaddingHorizontal==`function`?e.tilingPaddingHorizontal.call():e.tilingPaddingHorizontal};f.prototype.run=function(){var e,t,n=this.options;this.idToLNode={};var r=this.layout=new o,i=this;i.stopped=!1,this.cy=this.options.cy,this.cy.trigger({type:`layoutstart`,layout:this});var a=r.newGraphManager();this.gm=a;var s=this.options.eles.nodes(),c=this.options.eles.edges();this.root=a.addRoot(),this.processChildrenList(this.root,this.getTopMostNodes(s),r);for(var l=0;l<c.length;l++){var u=c[l],d=this.idToLNode[u.data(`source`)],f=this.idToLNode[u.data(`target`)];if(d!==f&&d.getEdgesBetween(f).length==0){var p=a.add(r.newEdge(),d,f);p.id=u.id()}}var m=function(e,t){typeof e==`number`&&(e=t);var n=e.data(`id`),r=i.idToLNode[n];return{x:r.getRect().getCenterX(),y:r.getRect().getCenterY()}},h=function a(){for(var o=function(){n.fit&&n.cy.fit(n.eles,n.padding),e||(e=!0,i.cy.one(`layoutready`,n.ready),i.cy.trigger({type:`layoutready`,layout:i}))},s=i.options.refresh,c,l=0;l<s&&!c;l++)c=i.stopped||i.layout.tick();if(c){r.checkLayoutSuccess()&&!r.isSubLayout&&r.doPostLayout(),r.tilingPostLayout&&r.tilingPostLayout(),r.isLayoutFinished=!0,i.options.eles.nodes().positions(m),o(),i.cy.one(`layoutstop`,i.options.stop),i.cy.trigger({type:`layoutstop`,layout:i}),t&&cancelAnimationFrame(t),e=!1;return}var u=i.layout.getPositionsData();n.eles.nodes().positions(function(e,t){if(typeof e==`number`&&(e=t),!e.isParent()){for(var n=e.id(),r=u[n],i=e;r==null&&(r=u[i.data(`parent`)]||u[`DummyCompound_`+i.data(`parent`)],u[n]=r,i=i.parent()[0],i!=null););return r==null?{x:e.position(`x`),y:e.position(`y`)}:{x:r.x,y:r.y}}}),o(),t=requestAnimationFrame(a)};return r.addListener(`layoutstarted`,function(){i.options.animate===`during`&&(t=requestAnimationFrame(h))}),r.runLayout(),this.options.animate!==`during`&&(i.options.eles.nodes().not(`:parent`).layoutPositions(i,i.options,m),e=!1),this},f.prototype.getTopMostNodes=function(e){for(var t={},n=0;n<e.length;n++)t[e[n].id()]=!0;return e.filter(function(e,n){typeof e==`number`&&(e=n);for(var r=e.parent()[0];r!=null;){if(t[r.id()])return!1;r=r.parent()[0]}return!0})},f.prototype.processChildrenList=function(e,t,n){for(var r=t.length,i=0;i<r;i++){var a=t[i],o=a.children(),u,d=a.layoutDimensions({nodeDimensionsIncludeLabels:this.options.nodeDimensionsIncludeLabels});if(u=a.outerWidth()!=null&&a.outerHeight()!=null?e.add(new s(n.graphManager,new c(a.position(`x`)-d.w/2,a.position(`y`)-d.h/2),new l(parseFloat(d.w),parseFloat(d.h)))):e.add(new s(this.graphManager)),u.id=a.data(`id`),u.paddingLeft=parseInt(a.css(`padding`)),u.paddingTop=parseInt(a.css(`padding`)),u.paddingRight=parseInt(a.css(`padding`)),u.paddingBottom=parseInt(a.css(`padding`)),this.options.nodeDimensionsIncludeLabels&&a.isParent()){var f=a.boundingBox({includeLabels:!0,includeNodes:!1}).w,p=a.boundingBox({includeLabels:!0,includeNodes:!1}).h,m=a.css(`text-halign`);u.labelWidth=f,u.labelHeight=p,u.labelPos=m}if(this.idToLNode[a.data(`id`)]=u,isNaN(u.rect.x)&&(u.rect.x=0),isNaN(u.rect.y)&&(u.rect.y=0),o!=null&&o.length>0){var h=n.getGraphManager().add(n.newGraph(),u);this.processChildrenList(h,o,n)}}},f.prototype.stop=function(){return this.stopped=!0,this};var m=function(e){e(`layout`,`cose-bilkent`,f)};typeof cytoscape<`u`&&m(cytoscape),e.exports=m})])})})),a=e.x(i(),1);t.t.use(a.default);function o(e,t){e.forEach(e=>{let n={id:e.id,labelText:e.label,height:e.height,width:e.width,padding:e.padding??0};Object.keys(e).forEach(t=>{[`id`,`label`,`height`,`width`,`padding`,`x`,`y`].includes(t)||(n[t]=e[t])}),t.add({group:`nodes`,data:n,position:{x:e.x??0,y:e.y??0}})})}e.h(o,`addNodes`);function s(e,t){e.forEach(e=>{let n={id:e.id,source:e.start,target:e.end};Object.keys(e).forEach(t=>{[`id`,`start`,`end`].includes(t)||(n[t]=e[t])}),t.add({group:`edges`,data:n})})}e.h(s,`addEdges`);function c(n){return new Promise(r=>{let i=e.p(`body`).append(`div`).attr(`id`,`cy`).attr(`style`,`display:none`),a=t.t({container:document.getElementById(`cy`),style:[{selector:`edge`,style:{"curve-style":`bezier`}}]});i.remove(),o(n.nodes,a),s(n.edges,a),a.nodes().forEach(function(e){e.layoutDimensions=()=>{let t=e.data();return{w:t.width,h:t.height}}}),a.layout({name:`cose-bilkent`,quality:`proof`,styleEnabled:!1,animate:!1}).run(),a.ready(t=>{e.g.info(`Cytoscape ready`,t),r(a)})})}e.h(c,`createCytoscapeInstance`);function l(e){return e.nodes().map(e=>{let t=e.data(),n=e.position(),r={id:t.id,x:n.x,y:n.y};return Object.keys(t).forEach(e=>{e!==`id`&&(r[e]=t[e])}),r})}e.h(l,`extractPositionedNodes`);function u(e){return e.edges().map(e=>{let t=e.data(),n=e._private.rscratch,r={id:t.id,source:t.source,target:t.target,startX:n.startX,startY:n.startY,midX:n.midX,midY:n.midY,endX:n.endX,endY:n.endY};return Object.keys(t).forEach(e=>{[`id`,`source`,`target`].includes(e)||(r[e]=t[e])}),r})}e.h(u,`extractPositionedEdges`);async function d(t,n){e.g.debug(`Starting cose-bilkent layout algorithm`);try{f(t);let n=await c(t),r=l(n),i=u(n);return e.g.debug(`Layout completed: ${r.length} nodes, ${i.length} edges`),{nodes:r,edges:i}}catch(t){throw e.g.error(`Error in cose-bilkent layout algorithm:`,t),t}}e.h(d,`executeCoseBilkentLayout`);function f(e){if(!e)throw Error(`Layout data is required`);if(!e.config)throw Error(`Configuration is required in layout data`);if(!e.rootNode)throw Error(`Root node is required`);if(!e.nodes||!Array.isArray(e.nodes))throw Error(`No nodes found in layout data`);if(!Array.isArray(e.edges))throw Error(`Edges array is required in layout data`);return!0}e.h(f,`validateLayoutData`);var p=e.h(async(e,t,{insertCluster:n,insertEdge:r,insertEdgeLabel:i,insertMarkers:a,insertNode:o,log:s,positionEdgeLabel:c},{algorithm:l})=>{let u={},f={},p=t.select(`g`);a(p,e.markers,e.type,e.diagramId);let m=p.insert(`g`).attr(`class`,`subgraphs`),h=p.insert(`g`).attr(`class`,`edgePaths`),g=p.insert(`g`).attr(`class`,`edgeLabels`),_=p.insert(`g`).attr(`class`,`nodes`);s.debug(`Inserting nodes into DOM for dimension calculation`),await Promise.all(e.nodes.map(async t=>{if(t.isGroup){let e={...t};f[t.id]=e,u[t.id]=e,await n(m,t)}else{let n={...t};u[t.id]=n;let r=await o(_,t,{config:e.config,dir:e.direction||`TB`}),i=r.node().getBBox();n.width=i.width,n.height=i.height,n.domId=r,s.debug(`Node ${t.id} dimensions: ${i.width}x${i.height}`)}})),s.debug(`Running cose-bilkent layout algorithm`);let v=await d({...e,nodes:e.nodes.map(e=>{let t=u[e.id];return{...e,width:t.width,height:t.height}})},e.config);s.debug(`Positioning nodes based on layout results`),v.nodes.forEach(e=>{let t=u[e.id];t?.domId&&(t.domId.attr(`transform`,`translate(${e.x}, ${e.y})`),t.x=e.x,t.y=e.y,s.debug(`Positioned node ${t.id} at center (${e.x}, ${e.y})`))}),v.edges.forEach(t=>{let n=e.edges.find(e=>e.id===t.id);n&&(n.points=[{x:t.startX,y:t.startY},{x:t.midX,y:t.midY},{x:t.endX,y:t.endY}])}),s.debug(`Inserting and positioning edges`),await Promise.all(e.edges.map(async t=>{await i(g,t);let n=u[t.start??``],a=u[t.end??``];if(n&&a){let i=v.edges.find(e=>e.id===t.id);if(i){s.debug(`APA01 positionedEdge`,i);let o={...t};c(o,r(h,o,f,e.type,n,a,e.diagramId))}else{let i={...t,points:[{x:n.x||0,y:n.y||0},{x:a.x||0,y:a.y||0}]};c(i,r(h,i,f,e.type,n,a,e.diagramId))}}})),s.debug(`Cose-bilkent rendering completed`)},`render`);exports.render=p;

package/dist/dagre-BM42HDAG-BhbA1R8l.cjs

@@ -0,0 +1,4 @@
+const e=require(`./src-BgvDIw01.cjs`),t=require(`./chunk-CSCIHK7Q-BPMuICCz.cjs`);require(`./chunk-5ZQYHXKU-BMnKD7Zq.cjs`),require(`./chunk-BSJP7CBP-CaeBFqNU.cjs`);const n=require(`./chunk-L5ZTLDWV-BE9udiOh.cjs`);require(`./chunk-NZK2D7GU-_twqedIe.cjs`),require(`./chunk-O5CBEL6O-CDvi2oZo.cjs`);const r=require(`./chunk-3OPIFGDE-CT5oNC5X.cjs`),i=require(`./chunk-KSCS5N6A-DO8jEi0y.cjs`),a=require(`./graphlib-B5AXIZA4.cjs`),o=require(`./dagre-CC68z3y6.cjs`);var s=4;function c(e){return o.r(e,s)}function l(e){var t={options:{directed:e.isDirected(),multigraph:e.isMultigraph(),compound:e.isCompound()},nodes:u(e),edges:d(e)};return a.r(e.graph())||(t.value=c(e.graph())),t}function u(e){return o.n(e.nodes(),function(t){var n=e.node(t),r=e.parent(t),i={v:t};return a.r(n)||(i.value=n),a.r(r)||(i.parent=r),i})}function d(e){return o.n(e.edges(),function(t){var n=e.edge(t),r={v:t.v,w:t.w};return a.r(t.name)||(r.name=t.name),a.r(n)||(r.value=n),r})}var f=new Map,p=new Map,m=new Map,h=e.h(()=>{p.clear(),m.clear(),f.clear()},`clear`),g=e.h((t,n)=>{let r=p.get(n)||[];return e.g.trace(`In isDescendant`,n,` `,t,` = `,r.includes(t)),r.includes(t)},`isDescendant`),_=e.h((t,n)=>{let r=p.get(n)||[];return e.g.info(`Descendants of `,n,` is `,r),e.g.info(`Edge is `,t),t.v===n||t.w===n?!1:r?r.includes(t.v)||g(t.v,n)||g(t.w,n)||r.includes(t.w):(e.g.debug(`Tilt, `,n,`,not in descendants`),!1)},`edgeInCluster`),v=e.h((t,n,r,i)=>{e.g.warn(`Copying children of `,t,`root`,i,`data`,n.node(t),i);let a=n.children(t)||[];t!==i&&a.push(t),e.g.warn(`Copying (nodes) clusterId`,t,`nodes`,a),a.forEach(a=>{if(n.children(a).length>0)v(a,n,r,i);else{let o=n.node(a);e.g.info(`cp `,a,` to `,i,` with parent `,t),r.setNode(a,o),i!==n.parent(a)&&(e.g.warn(`Setting parent`,a,n.parent(a)),r.setParent(a,n.parent(a))),t!==i&&a!==t?(e.g.debug(`Setting parent`,a,t),r.setParent(a,t)):(e.g.info(`In copy `,t,`root`,i,`data`,n.node(t),i),e.g.debug(`Not Setting parent for node=`,a,`cluster!==rootId`,t!==i,`node!==clusterId`,a!==t));let s=n.edges(a);e.g.debug(`Copying Edges`,s),s.forEach(a=>{e.g.info(`Edge`,a);let o=n.edge(a.v,a.w,a.name);e.g.info(`Edge data`,o,i);try{_(a,i)?(e.g.info(`Copying as `,a.v,a.w,o,a.name),r.setEdge(a.v,a.w,o,a.name),e.g.info(`newGraph edges `,r.edges(),r.edge(r.edges()[0]))):e.g.info(`Skipping copy of edge `,a.v,`-->`,a.w,` rootId: `,i,` clusterId:`,t)}catch(t){e.g.error(t)}})}e.g.debug(`Removing node`,a),n.removeNode(a)})},`copy`),y=e.h((e,t)=>{let n=t.children(e),r=[...n];for(let i of n)m.set(i,e),r=[...r,...y(i,t)];return r},`extractDescendants`),b=e.h((e,t,n)=>{let r=e.edges().filter(e=>e.v===t||e.w===t),i=e.edges().filter(e=>e.v===n||e.w===n),a=r.map(e=>({v:e.v===t?n:e.v,w:e.w===t?t:e.w})),o=i.map(e=>({v:e.v,w:e.w}));return a.filter(e=>o.some(t=>e.v===t.v&&e.w===t.w))},`findCommonEdges`),x=e.h((t,n,r)=>{let i=n.children(t);if(e.g.trace(`Searching children of id `,t,i),i.length<1)return t;let a;for(let e of i){let t=x(e,n,r),i=b(n,r,t);if(t)if(i.length>0)a=t;else return t}return a},`findNonClusterChild`),S=e.h(e=>!f.has(e)||!f.get(e).externalConnections?e:f.has(e)?f.get(e).id:e,`getAnchorId`),C=e.h((t,n)=>{if(!t||n>10){e.g.debug(`Opting out, no graph `);return}else e.g.debug(`Opting in, graph `);t.nodes().forEach(function(n){t.children(n).length>0&&(e.g.warn(`Cluster identified`,n,` Replacement id in edges: `,x(n,t,n)),p.set(n,y(n,t)),f.set(n,{id:x(n,t,n),clusterData:t.node(n)}))}),t.nodes().forEach(function(n){let r=t.children(n),i=t.edges();r.length>0?(e.g.debug(`Cluster identified`,n,p),i.forEach(t=>{g(t.v,n)^g(t.w,n)&&(e.g.warn(`Edge: `,t,` leaves cluster `,n),e.g.warn(`Descendants of XXX `,n,`: `,p.get(n)),f.get(n).externalConnections=!0)})):e.g.debug(`Not a cluster `,n,p)});for(let e of f.keys()){let n=f.get(e).id,r=t.parent(n);r!==e&&f.has(r)&&!f.get(r).externalConnections&&(f.get(e).id=r)}t.edges().forEach(function(n){let r=t.edge(n);e.g.warn(`Edge `+n.v+` -> `+n.w+`: `+JSON.stringify(n)),e.g.warn(`Edge `+n.v+` -> `+n.w+`: `+JSON.stringify(t.edge(n)));let i=n.v,a=n.w;if(e.g.warn(`Fix XXX`,f,`ids:`,n.v,n.w,`Translating: `,f.get(n.v),` --- `,f.get(n.w)),f.get(n.v)||f.get(n.w)){if(e.g.warn(`Fixing and trying - removing XXX`,n.v,n.w,n.name),i=S(n.v),a=S(n.w),t.removeEdge(n.v,n.w,n.name),i!==n.v){let e=t.parent(i);f.get(e).externalConnections=!0,r.fromCluster=n.v}if(a!==n.w){let e=t.parent(a);f.get(e).externalConnections=!0,r.toCluster=n.w}e.g.warn(`Fix Replacing with XXX`,i,a,n.name),t.setEdge(i,a,r,n.name)}}),e.g.warn(`Adjusted Graph`,l(t)),w(t,0),e.g.trace(f)},`adjustClustersAndEdges`),w=e.h((t,n)=>{if(e.g.warn(`extractor - `,n,l(t),t.children(`D`)),n>10){e.g.error(`Bailing out`);return}let r=t.nodes(),i=!1;for(let e of r){let n=t.children(e);i||=n.length>0}if(!i){e.g.debug(`Done, no node has children`,t.nodes());return}e.g.debug(`Nodes = `,r,n);for(let i of r)if(e.g.debug(`Extracting node`,i,f,f.has(i)&&!f.get(i).externalConnections,!t.parent(i),t.node(i),t.children(`D`),` Depth `,n),!f.has(i))e.g.debug(`Not a cluster`,i,n);else if(!f.get(i).externalConnections&&t.children(i)&&t.children(i).length>0){e.g.warn(`Cluster without external connections, without a parent and with children`,i,n);let r=t.graph().rankdir===`TB`?`LR`:`TB`;f.get(i)?.clusterData?.dir&&(r=f.get(i).clusterData.dir,e.g.warn(`Fixing dir`,f.get(i).clusterData.dir,r));let o=new a.t({multigraph:!0,compound:!0}).setGraph({rankdir:r,nodesep:50,ranksep:50,marginx:8,marginy:8}).setDefaultEdgeLabel(function(){return{}});e.g.warn(`Old graph before copy`,l(t)),v(i,t,o,i),t.setNode(i,{clusterNode:!0,id:i,clusterData:f.get(i).clusterData,label:f.get(i).label,graph:o}),e.g.warn(`New graph after copy node: (`,i,`)`,l(o)),e.g.debug(`Old graph after copy`,l(t))}else e.g.warn(`Cluster ** `,i,` **not meeting the criteria !externalConnections:`,!f.get(i).externalConnections,` no parent: `,!t.parent(i),` children `,t.children(i)&&t.children(i).length>0,t.children(`D`),n),e.g.debug(f);r=t.nodes(),e.g.warn(`New list of nodes`,r);for(let i of r){let r=t.node(i);e.g.warn(` Now next level`,i,r),r?.clusterNode&&w(r.graph,n+1)}},`extractor`),T=e.h((e,t)=>{if(t.length===0)return[];let n=Object.assign([],t);return t.forEach(t=>{let r=T(e,e.children(t));n=[...n,...r]}),n},`sorter`),E=e.h(e=>T(e,e.children()),`sortNodesByHierarchy`),D=e.h(async(t,a,s,c,u,d)=>{e.g.warn(`Graph in recursive render:XAX`,l(a),u);let p=a.graph().rankdir;e.g.trace(`Dir in recursive render - dir:`,p);let m=t.insert(`g`).attr(`class`,`root`);a.nodes()?e.g.info(`Recursive render XXX`,a.nodes()):e.g.info(`No nodes found for`,a),a.edges().length>0&&e.g.info(`Recursive edges`,a.edge(a.edges()[0]));let h=m.insert(`g`).attr(`class`,`clusters`),g=m.insert(`g`).attr(`class`,`edgePaths`),_=m.insert(`g`).attr(`class`,`edgeLabels`),v=m.insert(`g`).attr(`class`,`nodes`);await Promise.all(a.nodes().map(async function(t){let n=a.node(t);if(u!==void 0){let n=JSON.parse(JSON.stringify(u.clusterData));e.g.trace(`Setting data for parent cluster XXX
+ Node.id = `,t,`
+ data=`,n.height,`
+Parent cluster`,u.height),a.setNode(u.id,n),a.parent(t)||(e.g.trace(`Setting parent`,t,u.id),a.setParent(t,u.id,n))}if(e.g.info(`(Insert) Node XXX`+t+`: `+JSON.stringify(a.node(t))),n?.clusterNode){e.g.info(`Cluster identified XBX`,t,n.width,a.node(t));let{ranksep:i,nodesep:o}=a.graph();n.graph.setGraph({...n.graph.graph(),ranksep:i+25,nodesep:o});let l=await D(v,n.graph,s,c,a.node(t),d),u=l.elem;r.u(n,u),n.diff=l.diff||0,e.g.info(`New compound node after recursive render XAX`,t,`width`,n.width,`height`,n.height),r.l(u,n)}else a.children(t).length>0?(e.g.trace(`Cluster - the non recursive path XBX`,t,n.id,n,n.width,`Graph:`,a),e.g.trace(x(n.id,a)),f.set(n.id,{id:x(n.id,a),node:n})):(e.g.trace(`Node - the non recursive path XAX`,t,v,a.node(t),p),await r.a(v,a.node(t),{config:d,dir:p}))})),await e.h(async()=>{let t=a.edges().map(async function(t){let n=a.edge(t.v,t.w,t.name);e.g.info(`Edge `+t.v+` -> `+t.w+`: `+JSON.stringify(t)),e.g.info(`Edge `+t.v+` -> `+t.w+`: `,t,` `,JSON.stringify(a.edge(t))),e.g.info(`Fix`,f,`ids:`,t.v,t.w,`Translating: `,f.get(t.v),f.get(t.w)),await i.r(_,n)});await Promise.all(t)},`processEdges`)(),e.g.info(`Graph before layout:`,JSON.stringify(l(a))),e.g.info(`############################################# XXX`),e.g.info(`###                Layout                 ### XXX`),e.g.info(`############################################# XXX`),o.t(a),e.g.info(`Graph after layout:`,JSON.stringify(l(a)));let y=0,{subGraphTitleTotalMargin:b}=n.n(d);return await Promise.all(E(a).map(async function(t){let n=a.node(t);if(e.g.info(`Position XBX => `+t+`: (`+n.x,`,`+n.y,`) width: `,n.width,` height: `,n.height),n?.clusterNode)n.y+=b,e.g.info(`A tainted cluster node XBX1`,t,n.id,n.width,n.height,n.x,n.y,a.parent(t)),f.get(n.id).node=n,r.c(n);else if(a.children(t).length>0){e.g.info(`A pure cluster node XBX1`,t,n.id,n.x,n.y,n.width,n.height,a.parent(t)),n.height+=b,a.node(n.parentId);let i=n?.padding/2||0,o=n?.labelBBox?.height||0,s=o-i||0;e.g.debug(`OffsetY`,s,`labelHeight`,o,`halfPadding`,i),await r.i(h,n),f.get(n.id).node=n}else{let t=a.node(n.parentId);n.y+=b/2,e.g.info(`A regular node XBX1 - using the padding`,n.id,`parent`,n.parentId,n.width,n.height,n.x,n.y,`offsetY`,n.offsetY,`parent`,t,t?.offsetY,n),r.c(n)}})),a.edges().forEach(function(t){let n=a.edge(t);e.g.info(`Edge `+t.v+` -> `+t.w+`: `+JSON.stringify(n),n),n.points.forEach(e=>e.y+=b/2),i.a(n,i.n(g,n,f,s,a.node(t.v),a.node(t.w),c))}),a.nodes().forEach(function(t){let n=a.node(t);e.g.info(t,n.type,n.diff),n.isGroup&&(y=n.diff)}),e.g.warn(`Returning from recursive render XAX`,m,y),{elem:m,diff:y}},`recursiveRender`),O=e.h(async(n,o)=>{let s=new a.t({multigraph:!0,compound:!0}).setGraph({rankdir:n.direction,nodesep:n.config?.nodeSpacing||n.config?.flowchart?.nodeSpacing||n.nodeSpacing,ranksep:n.config?.rankSpacing||n.config?.flowchart?.rankSpacing||n.rankSpacing,marginx:8,marginy:8}).setDefaultEdgeLabel(function(){return{}}),c=o.select(`g`);i.i(c,n.markers,n.type,n.diagramId),r.n(),i.t(),r.t(),h(),n.nodes.forEach(e=>{s.setNode(e.id,{...e}),e.parentId&&s.setParent(e.id,e.parentId)}),e.g.debug(`Edges:`,n.edges),n.edges.forEach(e=>{if(e.start===e.end){let t=e.start,n=t+`---`+t+`---1`,r=t+`---`+t+`---2`,i=s.node(t);s.setNode(n,{domId:n,id:n,parentId:i.parentId,labelStyle:``,label:``,padding:0,shape:`labelRect`,style:``,width:10,height:10}),s.setParent(n,i.parentId),s.setNode(r,{domId:r,id:r,parentId:i.parentId,labelStyle:``,padding:0,shape:`labelRect`,label:``,style:``,width:10,height:10}),s.setParent(r,i.parentId);let a=structuredClone(e),o=structuredClone(e),c=structuredClone(e);a.label=``,a.arrowTypeEnd=`none`,a.endLabelLeft=``,a.endLabelRight=``,a.startLabelLeft=``,a.id=t+`-cyclic-special-1`,o.startLabelRight=``,o.startLabelLeft=``,o.endLabelLeft=``,o.endLabelRight=``,o.arrowTypeStart=`none`,o.arrowTypeEnd=`none`,o.id=t+`-cyclic-special-mid`,c.label=``,c.startLabelRight=``,c.startLabelLeft=``,c.arrowTypeStart=`none`,i.isGroup&&(a.fromCluster=t,c.toCluster=t),c.id=t+`-cyclic-special-2`,c.arrowTypeStart=`none`,s.setEdge(t,n,a,t+`-cyclic-special-0`),s.setEdge(n,r,o,t+`-cyclic-special-1`),s.setEdge(r,t,c,t+`-cyc<lic-special-2`)}else s.setEdge(e.start,e.end,{...e},e.id)}),e.g.warn(`Graph at first:`,JSON.stringify(l(s))),C(s),e.g.warn(`Graph after XAX:`,JSON.stringify(l(s)));let u=t.x();await D(c,s,n.type,n.diagramId,void 0,u)},`render`);exports.render=O;