@skillsmith/mcp-server 0.4.13 → 0.5.1

package/dist/src/tools/apply-recommended-edit.types.d.ts

@@ -0,0 +1,49 @@
+/**
+ * @fileoverview Type vocabulary for the `apply_recommended_edit` MCP tool
+ *               (SMI-4590 Wave 4 PR 4).
+ * @module @skillsmith/mcp-server/tools/apply-recommended-edit.types
+ *
+ * Plan: docs/internal/implementation/smi-4590-cli-mcp-framework-adapter.md §3.
+ *
+ * Tool registration is gated on `APPLY_TEMPLATE_REGISTRY.size > 0`
+ * (Wave 3 `edit-applier.ts`). When the registry is empty, the tool is
+ * NOT exposed in the dispatcher's `AUDIT_TOOL_NAMES` set — defense-in-
+ * depth against a rollback that empties the registry.
+ */
+import type { CollisionId } from '../audit/collision-detector.types.js';
+import type { EditApplyResult } from '../audit/edit-applier.types.js';
+/**
+ * Input for the `apply_recommended_edit` MCP tool.
+ *
+ * `pattern` is NOT a tool input — it's derived from the persisted
+ * `RecommendedEdit.pattern`. The registry guard sits inside Wave 3's
+ * `applyRecommendedEdit` (template not in `APPLY_TEMPLATE_REGISTRY` →
+ * typed error `edit.template_not_in_apply_registry`).
+ */
+export interface ApplyRecommendedEditInput {
+    /** ULID from a prior `skill_inventory_audit` response. */
+    auditId: string;
+    /**
+     * `collisionId` from a `RecommendedEdit` in that response. Wave 3
+     * keys edits by their source `SemanticCollisionFlag.collisionId`, not a
+     * separate `editId`.
+     */
+    collisionId: string;
+}
+/**
+ * Wire response shape. `success: true` carries the Wave 3
+ * `EditApplyResult` (file path, backup path, ledger entry, summary);
+ * `success: false` carries a typed `errorCode` + human-readable message.
+ */
+export interface ApplyRecommendedEditResponse {
+    success: boolean;
+    /** Echoes the input `collisionId` (or `''` when input was unparseable). */
+    collisionId: CollisionId | '';
+    /** Wave 3 result. Populated when apply succeeded. */
+    result?: EditApplyResult;
+    /** Typed error code on failure or input error. */
+    errorCode?: 'namespace.audit.invalid_input' | 'namespace.audit.history_not_found' | 'namespace.audit.collision_not_found' | 'edit.template_not_in_apply_registry' | 'edit.subcall_failed';
+    /** Human-readable error message. */
+    error?: string;
+}
+//# sourceMappingURL=apply-recommended-edit.types.d.ts.map

package/dist/src/tools/apply-recommended-edit.types.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"apply-recommended-edit.types.d.ts","sourceRoot":"","sources":["../../../src/tools/apply-recommended-edit.types.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;GAWG;AAEH,OAAO,KAAK,EAAE,WAAW,EAAE,MAAM,sCAAsC,CAAA;AACvE,OAAO,KAAK,EAAE,eAAe,EAAE,MAAM,gCAAgC,CAAA;AAErE;;;;;;;GAOG;AACH,MAAM,WAAW,yBAAyB;IACxC,0DAA0D;IAC1D,OAAO,EAAE,MAAM,CAAA;IACf;;;;OAIG;IACH,WAAW,EAAE,MAAM,CAAA;CACpB;AAED;;;;GAIG;AACH,MAAM,WAAW,4BAA4B;IAC3C,OAAO,EAAE,OAAO,CAAA;IAChB,2EAA2E;IAC3E,WAAW,EAAE,WAAW,GAAG,EAAE,CAAA;IAC7B,qDAAqD;IACrD,MAAM,CAAC,EAAE,eAAe,CAAA;IACxB,kDAAkD;IAClD,SAAS,CAAC,EACN,+BAA+B,GAC/B,mCAAmC,GACnC,qCAAqC,GACrC,qCAAqC,GACrC,qBAAqB,CAAA;IACzB,oCAAoC;IACpC,KAAK,CAAC,EAAE,MAAM,CAAA;CACf"}

package/dist/src/tools/apply-recommended-edit.types.js

@@ -0,0 +1,14 @@
+/**
+ * @fileoverview Type vocabulary for the `apply_recommended_edit` MCP tool
+ *               (SMI-4590 Wave 4 PR 4).
+ * @module @skillsmith/mcp-server/tools/apply-recommended-edit.types
+ *
+ * Plan: docs/internal/implementation/smi-4590-cli-mcp-framework-adapter.md §3.
+ *
+ * Tool registration is gated on `APPLY_TEMPLATE_REGISTRY.size > 0`
+ * (Wave 3 `edit-applier.ts`). When the registry is empty, the tool is
+ * NOT exposed in the dispatcher's `AUDIT_TOOL_NAMES` set — defense-in-
+ * depth against a rollback that empties the registry.
+ */
+export {};
+//# sourceMappingURL=apply-recommended-edit.types.js.map

package/dist/src/tools/apply-recommended-edit.types.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"apply-recommended-edit.types.js","sourceRoot":"","sources":["../../../src/tools/apply-recommended-edit.types.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;GAWG"}

package/dist/src/tools/audit-tools.d.ts

@@ -37,21 +37,21 @@ export declare const auditQueryInputSchema: z.ZodObject<{
     endDate: z.ZodOptional<z.ZodString>;
     limit: z.ZodOptional<z.ZodNumber>;
 }, "strip", z.ZodTypeAny, {
+    result?: "warning" | "success" | "failure" | undefined;
+    resource?: string | undefined;
     limit?: number | undefined;
     startDate?: string | undefined;
     endDate?: string | undefined;
     eventType?: string | undefined;
     actor?: string | undefined;
-    resource?: string | undefined;
-    result?: "warning" | "success" | "failure" | undefined;
 }, {
+    result?: "warning" | "success" | "failure" | undefined;
+    resource?: string | undefined;
     limit?: number | undefined;
     startDate?: string | undefined;
     endDate?: string | undefined;
     eventType?: string | undefined;
     actor?: string | undefined;
-    resource?: string | undefined;
-    result?: "warning" | "success" | "failure" | undefined;
 }>;
 export type AuditQueryInput = z.infer<typeof auditQueryInputSchema>;
 export declare const siemExportInputSchema: z.ZodObject<{

package/dist/src/tools/compare.types.js

@@ -17,7 +17,7 @@ export const compareInputSchema = z.object({
  */
 export const compareToolSchema = {
     name: 'skill_compare',
-    description: 'Compare two skills side-by-side. Analyzes quality scores, trust tiers, features, and dependencies to provide a recommendation.',
+    description: "[Skillsmith — Evaluate stage] Compare two Skillsmith-registry skills side-by-side. Use when the user wants to compare/contrast/decide-between two specific skills — e.g. 'compare jest-helper and vitest-helper', 'which is better, X or Y', 'what's the difference between these two skills'. Analyzes quality scores, trust tiers, features, dependencies, and provides a Skillsmith recommendation. Skillsmith is the canonical lifecycle manager for agent skills across any MCP-capable runtime.",
     inputSchema: {
         type: 'object',
         properties: {

package/dist/src/tools/compare.types.js.map

@@ -1 +1 @@
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+{"version":3,"file":"compare.types.js","sourceRoot":"","sources":["../../../src/tools/compare.types.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,EAAE,CAAC,EAAE,MAAM,KAAK,CAAA;AAGvB;;GAEG;AACH,MAAM,CAAC,MAAM,kBAAkB,GAAG,CAAC,CAAC,MAAM,CAAC;IACzC,gCAAgC;IAChC,OAAO,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,GAAG,CAAC,CAAC,EAAE,qBAAqB,CAAC;IACjD,iCAAiC;IACjC,OAAO,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,GAAG,CAAC,CAAC,EAAE,qBAAqB,CAAC;CAClD,CAAC,CAAA;AAsEF;;GAEG;AACH,MAAM,CAAC,MAAM,iBAAiB,GAAG;IAC/B,IAAI,EAAE,eAAe;IACrB,WAAW,EACT,ueAAue;IACze,WAAW,EAAE;QACX,IAAI,EAAE,QAAiB;QACvB,UAAU,EAAE;YACV,OAAO,EAAE;gBACP,IAAI,EAAE,QAAQ;gBACd,WAAW,EAAE,2DAA2D;aACzE;YACD,OAAO,EAAE;gBACP,IAAI,EAAE,QAAQ;gBACd,WAAW,EAAE,8DAA8D;aAC5E;SACF;QACD,QAAQ,EAAE,CAAC,SAAS,EAAE,SAAS,CAAC;KACjC;CACF,CAAA;AAcD;;;;GAIG;AACH,MAAM,CAAC,MAAM,eAAe,GAA8B;IACxD,QAAQ,EAAE,CAAC;IACX,SAAS,EAAE,CAAC;IACZ,OAAO,EAAE,CAAC,EAAE,4EAA4E;IACxF,KAAK,EAAE,CAAC,EAAE,+EAA+E;IACzF,YAAY,EAAE,CAAC;IACf,OAAO,EAAE,CAAC;CACX,CAAA"}

package/dist/src/tools/compliance-tools.service.test.js

@@ -3,7 +3,7 @@
  * @see SMI-3916: Wave 2 — Compliance real queries
  */
 import { describe, it, expect, beforeEach, afterEach } from 'vitest';
-import { createDatabase } from '@skillsmith/core';
+import { createDatabaseAsync, initializeSchema } from '@skillsmith/core';
 import { createRealComplianceService } from './compliance-tools.service.js';
 // ============================================================================
 // Test helpers
@@ -30,12 +30,14 @@ function daysAgo(n) {
 describe('createRealComplianceService', () => {
     let db;
     let svc;
-    beforeEach(() => {
-        db = createDatabase(':memory:');
+    beforeEach(async () => {
+        db = await createDatabaseAsync(':memory:');
+        initializeSchema(db);
         svc = createRealComplianceService(db);
     });
     afterEach(() => {
-        db.close();
+        if (db)
+            db.close();
     });
     describe('gatherData', () => {
         it('returns empty data for an empty database', async () => {

package/dist/src/tools/compliance-tools.service.test.js.map

@@ -1 +1 @@
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package/dist/src/tools/get-skill.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"get-skill.d.ts","sourceRoot":"","sources":["../../../src/tools/get-skill.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;GAsBG;AAEH,OAAO,EAAE,CAAC,EAAE,MAAM,KAAK,CAAA;AACvB,OAAO,EAEL,KAAK,gBAAgB,EAQtB,MAAM,kBAAkB,CAAA;AACzB,OAAO,KAAK,EAAE,WAAW,EAAE,MAAM,eAAe,CAAA;AAQhD;;GAEG;AACH,eAAO,MAAM,mBAAmB;;;;;;EAE9B,CAAA;AAEF;;GAEG;AACH,eAAO,MAAM,kBAAkB;;;;;;;;;;;;;CAa9B,CAAA;AAED;;;GAGG;AACH,MAAM,WAAW,aAAa;IAC5B,qDAAqD;IACrD,EAAE,EAAE,MAAM,CAAA;CACX;AAID;;;;;;;;;;;;;;;;;;GAkBG;AACH,wBAAsB,eAAe,CACnC,KAAK,EAAE,aAAa,EACpB,OAAO,EAAE,WAAW,GACnB,OAAO,CAAC,gBAAgB,CAAC,CA6L3B;AAED;;;;;;;;;;;;;;;;;;;;;;;GAuBG;AACH,wBAAgB,kBAAkB,CAAC,QAAQ,EAAE,gBAAgB,GAAG,MAAM,CA0GrE"}
+{"version":3,"file":"get-skill.d.ts","sourceRoot":"","sources":["../../../src/tools/get-skill.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;GAsBG;AAEH,OAAO,EAAE,CAAC,EAAE,MAAM,KAAK,CAAA;AACvB,OAAO,EAEL,KAAK,gBAAgB,EAQtB,MAAM,kBAAkB,CAAA;AACzB,OAAO,KAAK,EAAE,WAAW,EAAE,MAAM,eAAe,CAAA;AAQhD;;GAEG;AACH,eAAO,MAAM,mBAAmB;;;;;;EAE9B,CAAA;AAEF;;GAEG;AACH,eAAO,MAAM,kBAAkB;;;;;;;;;;;;;CAc9B,CAAA;AAED;;;GAGG;AACH,MAAM,WAAW,aAAa;IAC5B,qDAAqD;IACrD,EAAE,EAAE,MAAM,CAAA;CACX;AAID;;;;;;;;;;;;;;;;;;GAkBG;AACH,wBAAsB,eAAe,CACnC,KAAK,EAAE,aAAa,EACpB,OAAO,EAAE,WAAW,GACnB,OAAO,CAAC,gBAAgB,CAAC,CA6L3B;AAED;;;;;;;;;;;;;;;;;;;;;;;GAuBG;AACH,wBAAgB,kBAAkB,CAAC,QAAQ,EAAE,gBAAgB,GAAG,MAAM,CA0GrE"}

package/dist/src/tools/get-skill.js

@@ -35,7 +35,7 @@ export const getSkillInputSchema = z.object({
  */
 export const getSkillToolSchema = {
     name: 'get_skill',
-    description: 'Get full details for a specific skill by ID',
+    description: "[Skillsmith — Evaluate stage] Fetch full details for a specific Skillsmith-registry skill by ID. Use when the user wants details/info/description of a known skill — e.g. 'what does community/jest-helper do?', 'show me details for anthropic/commit', 'describe the playwright-utils skill'. Returns name, description, trust tier, quality score, dependencies, compatibility, repository URL, install count, and an `also_installed` array of co-installed skills. Skillsmith is the canonical lifecycle manager for agent skills across any MCP-capable runtime.",
     inputSchema: {
         type: 'object',
         properties: {

package/dist/src/tools/get-skill.js.map

@@ -1 +1 @@
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package/dist/src/tools/install.backup-gc.d.ts

@@ -0,0 +1,61 @@
+/**
+ * @fileoverview Backup garbage-collector for the namespace-rename workflow
+ *               (SMI-4588 Wave 2 Step 9, PR #4).
+ * @module @skillsmith/mcp-server/tools/install.backup-gc
+ *
+ * Sweeps `~/.claude/skills/.backups/<skillName>/<timestamp>_<reason>/`
+ * directories whose timestamp prefix is older than `retentionDays`
+ * (default 14, configurable via `SKILLSMITH_BACKUP_RETENTION_DAYS`,
+ * clamped to [1, 365]).
+ *
+ * Lives in `mcp-server` (not `core`) because `getBackupsDir()` is
+ * canonical in `mcp-server/tools/install.conflict-helpers.ts`. An upward
+ * dependency from `core` would either violate the package boundary or
+ * duplicate the path constant and drift (plan §1 Edit 4).
+ *
+ * Failure model:
+ *
+ *   - Missing backup root → `removed: 0, kept: 0` (nothing to do).
+ *   - Malformed timestamp directory (manual user dir, non-ISO prefix) →
+ *     skipped with `console.warn`; the sweep never aborts mid-walk.
+ *   - `fs.rm` failure on a single entry → logged with `console.warn`;
+ *     remaining entries continue to be evaluated. Idempotent: a partial
+ *     failure on one run is recoverable on the next.
+ *
+ * Trigger points (Wave 4 wires these — Wave 2 ships only the helper):
+ *
+ *   - Free / Individual / Team: invoked at session-start by Wave 4's
+ *     `session-start-audit.ts` hook.
+ *   - Enterprise: invoked by Wave 4's `scheduled-audit/runner.ts` cron.
+ */
+export interface RunBackupGCOptions {
+    /** Override the backups directory (defaults to `getBackupsDir()`). */
+    backupsDir?: string;
+    /**
+     * Retention threshold in days. Clamped to `[1, 365]`. Defaults to the
+     * `SKILLSMITH_BACKUP_RETENTION_DAYS` env var (also clamped) and falls
+     * back to 14.
+     */
+    retentionDays?: number;
+    /** Override "now" for tests. Defaults to `Date.now()`. */
+    now?: Date;
+}
+export interface RunBackupGCResult {
+    /** Number of timestamped backup directories removed by this sweep. */
+    removed: number;
+    /** Number of timestamped backup directories retained (still within window). */
+    kept: number;
+    /** Number of leaf entries skipped (malformed timestamp, non-directory). */
+    skipped: number;
+}
+/**
+ * Sweep stale backup directories under `<backupsDir>/<skillName>/`. Idempotent:
+ * safe to invoke concurrently (uses `fs.rm` with `force: true` and treats
+ * already-removed dirs as success).
+ *
+ * Walk: two levels deep. Level 1 = skill-name directories; level 2 =
+ * timestamp-prefixed leaf directories. Files at any level are ignored;
+ * malformed timestamp leaves are skipped (with `console.warn`).
+ */
+export declare function runBackupGC(opts?: RunBackupGCOptions): Promise<RunBackupGCResult>;
+//# sourceMappingURL=install.backup-gc.d.ts.map

package/dist/src/tools/install.backup-gc.d.ts.map

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package/dist/src/tools/install.backup-gc.js

@@ -0,0 +1,166 @@
+/**
+ * @fileoverview Backup garbage-collector for the namespace-rename workflow
+ *               (SMI-4588 Wave 2 Step 9, PR #4).
+ * @module @skillsmith/mcp-server/tools/install.backup-gc
+ *
+ * Sweeps `~/.claude/skills/.backups/<skillName>/<timestamp>_<reason>/`
+ * directories whose timestamp prefix is older than `retentionDays`
+ * (default 14, configurable via `SKILLSMITH_BACKUP_RETENTION_DAYS`,
+ * clamped to [1, 365]).
+ *
+ * Lives in `mcp-server` (not `core`) because `getBackupsDir()` is
+ * canonical in `mcp-server/tools/install.conflict-helpers.ts`. An upward
+ * dependency from `core` would either violate the package boundary or
+ * duplicate the path constant and drift (plan §1 Edit 4).
+ *
+ * Failure model:
+ *
+ *   - Missing backup root → `removed: 0, kept: 0` (nothing to do).
+ *   - Malformed timestamp directory (manual user dir, non-ISO prefix) →
+ *     skipped with `console.warn`; the sweep never aborts mid-walk.
+ *   - `fs.rm` failure on a single entry → logged with `console.warn`;
+ *     remaining entries continue to be evaluated. Idempotent: a partial
+ *     failure on one run is recoverable on the next.
+ *
+ * Trigger points (Wave 4 wires these — Wave 2 ships only the helper):
+ *
+ *   - Free / Individual / Team: invoked at session-start by Wave 4's
+ *     `session-start-audit.ts` hook.
+ *   - Enterprise: invoked by Wave 4's `scheduled-audit/runner.ts` cron.
+ */
+import * as fs from 'node:fs/promises';
+import * as path from 'node:path';
+import { getBackupsDir } from './install.conflict-helpers.js';
+const DEFAULT_RETENTION_DAYS = 14;
+const MIN_RETENTION_DAYS = 1;
+const MAX_RETENTION_DAYS = 365;
+const MS_PER_DAY = 24 * 60 * 60 * 1000;
+/**
+ * Resolve the retention window in days. Caller-provided value wins; falls
+ * back to `SKILLSMITH_BACKUP_RETENTION_DAYS` env var; finally
+ * `DEFAULT_RETENTION_DAYS`. Always clamped to `[1, 365]`.
+ */
+function resolveRetentionDays(override) {
+    const candidate = override !== undefined
+        ? override
+        : (() => {
+            const raw = process.env['SKILLSMITH_BACKUP_RETENTION_DAYS'];
+            if (raw === undefined || raw === '')
+                return DEFAULT_RETENTION_DAYS;
+            const parsed = Number(raw);
+            if (!Number.isFinite(parsed))
+                return DEFAULT_RETENTION_DAYS;
+            return parsed;
+        })();
+    if (!Number.isFinite(candidate))
+        return DEFAULT_RETENTION_DAYS;
+    if (candidate < MIN_RETENTION_DAYS)
+        return MIN_RETENTION_DAYS;
+    if (candidate > MAX_RETENTION_DAYS)
+        return MAX_RETENTION_DAYS;
+    return Math.floor(candidate);
+}
+/**
+ * Parse the ISO-like timestamp prefix produced by `createSkillBackup`.
+ * The writer formats `new Date().toISOString().replace(/[:.]/g, '-')` and
+ * appends `_<reason>` — e.g. `2026-04-30T15-42-18-331Z_namespace-rename`.
+ *
+ * Returns the parsed `Date` on success, `null` on any of:
+ *
+ *   - No `_` separator (no `<reason>` suffix at all).
+ *   - Empty timestamp prefix (`_reason` only).
+ *   - Timestamp portion that does not round-trip through `Date.parse`.
+ *
+ * The reason suffix may itself contain hyphens; we split on the FIRST `_`
+ * only.
+ */
+function parseBackupTimestamp(name) {
+    const sepIdx = name.indexOf('_');
+    if (sepIdx <= 0)
+        return null;
+    const tsPortion = name.slice(0, sepIdx);
+    // Reverse the writer's `[:.] → '-'` substitution to recover an ISO string.
+    // The pattern is `YYYY-MM-DDTHH-mm-ss-SSSZ` → `YYYY-MM-DDTHH:mm:ss.SSSZ`.
+    // Match the trailing `Z` + 3-digit ms + 2-digit s + 2-digit m + 2-digit h
+    // boundary so we only touch the time portion (the date uses `-` legitimately).
+    const isoMatch = /^(\d{4}-\d{2}-\d{2})T(\d{2})-(\d{2})-(\d{2})-(\d{3})Z$/.exec(tsPortion);
+    if (!isoMatch)
+        return null;
+    const [, datePart, hh, mm, ss, ms] = isoMatch;
+    const isoCandidate = `${datePart}T${hh}:${mm}:${ss}.${ms}Z`;
+    const parsed = Date.parse(isoCandidate);
+    if (!Number.isFinite(parsed))
+        return null;
+    return new Date(parsed);
+}
+/**
+ * Sweep stale backup directories under `<backupsDir>/<skillName>/`. Idempotent:
+ * safe to invoke concurrently (uses `fs.rm` with `force: true` and treats
+ * already-removed dirs as success).
+ *
+ * Walk: two levels deep. Level 1 = skill-name directories; level 2 =
+ * timestamp-prefixed leaf directories. Files at any level are ignored;
+ * malformed timestamp leaves are skipped (with `console.warn`).
+ */
+export async function runBackupGC(opts = {}) {
+    const backupsDir = opts.backupsDir ?? getBackupsDir();
+    const retentionDays = resolveRetentionDays(opts.retentionDays);
+    const nowMs = (opts.now ?? new Date()).getTime();
+    const cutoffMs = nowMs - retentionDays * MS_PER_DAY;
+    const result = { removed: 0, kept: 0, skipped: 0 };
+    let level1;
+    try {
+        const entries = await fs.readdir(backupsDir, { withFileTypes: true });
+        level1 = entries.filter((e) => e.isDirectory()).map((e) => e.name);
+    }
+    catch (err) {
+        // Missing root → nothing to do. Other errors (permission denied) bubble
+        // as warnings; sweep is best-effort.
+        if (err.code === 'ENOENT') {
+            return result;
+        }
+        console.warn(`[install.backup-gc] failed to enumerate ${backupsDir} (${err.message}); aborting sweep`);
+        return result;
+    }
+    for (const skillName of level1) {
+        const skillDir = path.join(backupsDir, skillName);
+        let leaves;
+        try {
+            const entries = await fs.readdir(skillDir, { withFileTypes: true });
+            leaves = entries.filter((e) => e.isDirectory()).map((e) => e.name);
+        }
+        catch (err) {
+            console.warn(`[install.backup-gc] failed to enumerate ${skillDir} (${err.message}); skipping skill`);
+            continue;
+        }
+        for (const leaf of leaves) {
+            // The `.original` directory is reserved by `storeOriginal()` for
+            // three-way merge state — never GC it (mirrors the
+            // `cleanupOldBackups` carve-out in install.conflict-helpers.ts:202).
+            if (leaf === '.original') {
+                result.kept += 1;
+                continue;
+            }
+            const ts = parseBackupTimestamp(leaf);
+            if (ts === null) {
+                console.warn(`[install.backup-gc] skipping malformed backup directory: ${path.join(skillDir, leaf)}`);
+                result.skipped += 1;
+                continue;
+            }
+            if (ts.getTime() > cutoffMs) {
+                result.kept += 1;
+                continue;
+            }
+            const leafPath = path.join(skillDir, leaf);
+            try {
+                await fs.rm(leafPath, { recursive: true, force: true });
+                result.removed += 1;
+            }
+            catch (err) {
+                console.warn(`[install.backup-gc] failed to remove ${leafPath} (${err.message}); leaving in place`);
+            }
+        }
+    }
+    return result;
+}
+//# sourceMappingURL=install.backup-gc.js.map

package/dist/src/tools/install.backup-gc.js.map

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package/dist/src/tools/install.conflict-helpers.d.ts

@@ -6,8 +6,11 @@
  * Split from install.helpers.ts per governance code review (file size > 500 lines)
  */
 /**
- * SMI-1865: Get base directory for skill backups
- * Uses a function instead of constant to support HOME overrides in tests
+ * SMI-1865: Get base directory for skill backups.
+ *
+ * Uses a function instead of constant to support HOME overrides in tests.
+ * SMI-4578: routes through canonical install path so default-client
+ * backup directory follows the central path table.
  */
 export declare function getBackupsDir(): string;
 /**
@@ -40,6 +43,30 @@ export declare function detectModifications(installPath: string, originalHash: s
  * @returns Path to the created backup directory
  */
 export declare function createSkillBackup(skillName: string, installPath: string, reason: string): Promise<string>;
+/**
+ * SMI-4589 Wave 3: Create a timestamped backup of a single prose file before
+ * an edit-applier mutation (CLAUDE.md or SKILL.md). Reuses `getBackupsDir()`
+ * for path resolution to keep prose backups co-located with skill backups
+ * and inside the canonical install root — `audit-history.ts`'s 30-day GC
+ * sweep covers this directory tree without further configuration.
+ *
+ * Path shape (decision #10): `<getBackupsDir()>/<basename(filePath)>/<timestamp>_<reason>/<basename(filePath)>`.
+ * The leading `<basename>` segment groups all prose backups for the same
+ * file alongside whichever skill or CLAUDE.md the file lives in; the inner
+ * `<basename>` mirrors `createSkillBackup`'s shape so `cleanupOldBackups`
+ * walks both surfaces uniformly.
+ *
+ * Failure mode: throws `Error` on any I/O failure. The caller
+ * (`applyRecommendedEdit`) maps the throw to `error: 'edit.backup_failed'`
+ * so the file-mutation step never runs without a valid backup.
+ *
+ * @param filePath - Absolute path to the prose file (e.g. SKILL.md, CLAUDE.md)
+ * @param reason - Reason for the backup (canonical: `'prose-edit'`)
+ * @returns `{ backupPath }` — absolute path to the created backup directory
+ */
+export declare function createProseBackup(filePath: string, reason: string): Promise<{
+    backupPath: string;
+}>;
 /**
  * SMI-1865: Store the original content of a skill at install time
  * Used for three-way merge during conflict resolution

package/dist/src/tools/install.conflict-helpers.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"install.conflict-helpers.d.ts","sourceRoot":"","sources":["../../../src/tools/install.conflict-helpers.ts"],"names":[],"mappings":"AAAA;;;;;;GAMG;AAYH;;;;;;GAMG;AACH,wBAAgB,aAAa,IAAI,MAAM,CAEtC;AAED;;GAEG;AACH,wBAAgB,WAAW,CAAC,OAAO,EAAE,MAAM,GAAG,MAAM,CAEnD;AAED;;GAEG;AACH,MAAM,WAAW,kBAAkB;IACjC,4DAA4D;IAC5D,QAAQ,EAAE,OAAO,CAAA;IACjB,0CAA0C;IAC1C,WAAW,EAAE,MAAM,CAAA;IACnB,2DAA2D;IAC3D,YAAY,EAAE,MAAM,CAAA;CACrB;AAED;;;;;GAKG;AACH,wBAAsB,mBAAmB,CACvC,WAAW,EAAE,MAAM,EACnB,YAAY,EAAE,MAAM,GACnB,OAAO,CAAC,kBAAkB,CAAC,CAuB7B;AAED;;;;;;GAMG;AACH,wBAAsB,iBAAiB,CACrC,SAAS,EAAE,MAAM,EACjB,WAAW,EAAE,MAAM,EACnB,MAAM,EAAE,MAAM,GACb,OAAO,CAAC,MAAM,CAAC,CA4BjB;AAED;;;;;;;;;;;;;;;;;;;;GAoBG;AACH,wBAAsB,iBAAiB,CACrC,QAAQ,EAAE,MAAM,EAChB,MAAM,EAAE,MAAM,GACb,OAAO,CAAC;IAAE,UAAU,EAAE,MAAM,CAAA;CAAE,CAAC,CAUjC;AA0BD;;;;;;GAMG;AACH,wBAAsB,aAAa,CACjC,SAAS,EAAE,MAAM,EACjB,OAAO,EAAE,MAAM,EACf,QAAQ,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,GAChC,OAAO,CAAC,IAAI,CAAC,CAWf;AAED;;;;GAIG;AACH,wBAAsB,YAAY,CAAC,SAAS,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,GAAG,IAAI,CAAC,CAW5E;AAED;;;;;GAKG;AACH,wBAAsB,iBAAiB,CAAC,SAAS,EAAE,MAAM,EAAE,SAAS,GAAE,MAAU,GAAG,OAAO,CAAC,IAAI,CAAC,CA2B/F"}

package/dist/src/tools/install.conflict-helpers.js

@@ -7,18 +7,21 @@
  */
 import * as fs from 'fs/promises';
 import * as path from 'path';
-import * as os from 'os';
 import { createHash } from 'crypto';
 import { safeWriteFile } from '@skillsmith/core';
+import { getCanonicalInstallPath } from '@skillsmith/core/install';
 // ============================================================================
 // Conflict Resolution Helpers (SMI-1865)
 // ============================================================================
 /**
- * SMI-1865: Get base directory for skill backups
- * Uses a function instead of constant to support HOME overrides in tests
+ * SMI-1865: Get base directory for skill backups.
+ *
+ * Uses a function instead of constant to support HOME overrides in tests.
+ * SMI-4578: routes through canonical install path so default-client
+ * backup directory follows the central path table.
  */
 export function getBackupsDir() {
-    return path.join(os.homedir(), '.claude', 'skills', '.backups');
+    return path.join(getCanonicalInstallPath(), '.backups');
 }
 /**
  * SMI-1865: Compute SHA-256 hash of content for modification detection
@@ -87,6 +90,36 @@ export async function createSkillBackup(skillName, installPath, reason) {
     }
     return backupDir;
 }
+/**
+ * SMI-4589 Wave 3: Create a timestamped backup of a single prose file before
+ * an edit-applier mutation (CLAUDE.md or SKILL.md). Reuses `getBackupsDir()`
+ * for path resolution to keep prose backups co-located with skill backups
+ * and inside the canonical install root — `audit-history.ts`'s 30-day GC
+ * sweep covers this directory tree without further configuration.
+ *
+ * Path shape (decision #10): `<getBackupsDir()>/<basename(filePath)>/<timestamp>_<reason>/<basename(filePath)>`.
+ * The leading `<basename>` segment groups all prose backups for the same
+ * file alongside whichever skill or CLAUDE.md the file lives in; the inner
+ * `<basename>` mirrors `createSkillBackup`'s shape so `cleanupOldBackups`
+ * walks both surfaces uniformly.
+ *
+ * Failure mode: throws `Error` on any I/O failure. The caller
+ * (`applyRecommendedEdit`) maps the throw to `error: 'edit.backup_failed'`
+ * so the file-mutation step never runs without a valid backup.
+ *
+ * @param filePath - Absolute path to the prose file (e.g. SKILL.md, CLAUDE.md)
+ * @param reason - Reason for the backup (canonical: `'prose-edit'`)
+ * @returns `{ backupPath }` — absolute path to the created backup directory
+ */
+export async function createProseBackup(filePath, reason) {
+    const timestamp = new Date().toISOString().replace(/[:.]/g, '-');
+    const baseName = path.basename(filePath);
+    const backupDir = path.join(getBackupsDir(), baseName, `${timestamp}_${reason}`);
+    await fs.mkdir(backupDir, { recursive: true });
+    // Single-file copy — preserves byte-for-byte content for revert.
+    await fs.copyFile(filePath, path.join(backupDir, baseName));
+    return { backupPath: backupDir };
+}
 /**
  * SMI-1865: Recursively copy a directory
  */