@skaile/workspaces 6.5.0 → 6.7.0

package/dist/chunk-DKXNKFKP.js.map

@@ -1 +0,0 @@
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The only API gap is transactions: `bun:sqlite`\n * has `db.transaction()`, `node:sqlite` does not — {@link openSqlite}\n * synthesizes it with manual `BEGIN`/`COMMIT`/`ROLLBACK`.\n */\nimport { createRequire } from \"node:module\";\n\nconst nodeRequire = createRequire(import.meta.url);\n\n/** True when executing under the Bun runtime. */\nconst isBun = typeof (globalThis as { Bun?: unknown }).Bun !== \"undefined\";\n\n/** A prepared statement bound with `$`-prefixed named parameters. */\nexport interface PortableStatement {\n  /** Returns the number of rows the statement changed. */\n  run(params?: Record<string, unknown>): PortableRunResult;\n  all<T = unknown>(params?: Record<string, unknown>): T[];\n  get<T = unknown>(params?: Record<string, unknown>): T | undefined;\n}\n\n/** Outcome of {@link PortableStatement.run}, normalised across drivers. */\nexport interface PortableRunResult {\n  changes: number;\n}\n\n/** A synchronous embedded SQLite handle, uniform across Bun and Node. */\nexport interface PortableDatabase {\n  exec(sql: string): void;\n  prepare(sql: string): PortableStatement;\n  /** Wrap `fn` so the statements it runs commit as one transaction. */\n  transaction<A extends unknown[]>(fn: (...args: A) => void): (...args: A) => void;\n  close(): void;\n}\n\nexport interface OpenSqliteOptions {\n  /** Open read-only. The database file must already exist. */\n  readonly?: boolean;\n}\n\n/** Minimal structural shape shared by `bun:sqlite` and `node:sqlite` handles. */\ninterface RawStatement {\n  run(params?: unknown): unknown;\n  all(params?: unknown): unknown[];\n  get(params?: unknown): unknown;\n}\ninterface RawDatabase {\n  exec(sql: string): unknown;\n  prepare(sql: string): RawStatement;\n  close(): void;\n}\n\nfunction wrapStatement(stmt: RawStatement): PortableStatement {\n  return {\n    run: (params) => {\n      const raw = (params === undefined ? stmt.run() : stmt.run(params)) as\n        | { changes?: number | bigint }\n        | undefined;\n      return { changes: Number(raw?.changes ?? 0) };\n    },\n    all: (params) => (params === undefined ? stmt.all() : stmt.all(params)) as never,\n    get: (params) => (params === undefined ? stmt.get() : stmt.get(params)) as never,\n  };\n}\n\nfunction openBunSqlite(path: string, opts: OpenSqliteOptions): PortableDatabase {\n  const { Database } = nodeRequire(\"bun:sqlite\") as {\n    Database: new (\n      p: string,\n      o?: { readonly?: boolean },\n    ) => RawDatabase & {\n      transaction<A extends unknown[]>(fn: (...args: A) => void): (...args: A) => void;\n    };\n  };\n  const db = opts.readonly ? new Database(path, { readonly: true }) : new Database(path);\n  return {\n    exec: (sql) => {\n      db.exec(sql);\n    },\n    prepare: (sql) => wrapStatement(db.prepare(sql)),\n    transaction: (fn) => db.transaction(fn),\n    close: () => {\n      db.close();\n    },\n  };\n}\n\n/**\n * Load `node:sqlite` without Node's \"SQLite is an experimental feature\"\n * `ExperimentalWarning` (Node 22.5–23). The warning is emitted synchronously by\n * the `require`, so the filter is installed for that one call only; every other\n * warning, before or after, is passed through untouched.\n */\nfunction requireNodeSqlite(): {\n  DatabaseSync: new (p: string, o?: { readOnly?: boolean }) => RawDatabase;\n} {\n  const original = process.emitWarning;\n  process.emitWarning = function (this: unknown, warning: string | Error, ...args: unknown[]) {\n    const first = args[0];\n    const type = typeof first === \"string\" ? first : (first as { type?: string } | undefined)?.type;\n    const text = typeof warning === \"string\" ? warning : warning?.message;\n    if (type === \"ExperimentalWarning\" && /sqlite/i.test(text ?? \"\")) return;\n    return (original as (...a: unknown[]) => void).call(process, warning, ...args);\n  } as typeof process.emitWarning;\n  try {\n    return nodeRequire(\"node:sqlite\");\n  } finally {\n    process.emitWarning = original;\n  }\n}\n\nfunction openNodeSqlite(path: string, opts: OpenSqliteOptions): PortableDatabase {\n  const { DatabaseSync } = requireNodeSqlite();\n  const db = opts.readonly ? new DatabaseSync(path, { readOnly: true }) : new DatabaseSync(path);\n  return {\n    exec: (sql) => {\n      db.exec(sql);\n    },\n    prepare: (sql) => wrapStatement(db.prepare(sql)),\n    transaction:\n      (fn) =>\n      (...args) => {\n        db.exec(\"BEGIN\");\n        try {\n          fn(...args);\n          db.exec(\"COMMIT\");\n        } catch (err) {\n          db.exec(\"ROLLBACK\");\n          throw err;\n        }\n      },\n    close: () => {\n      db.close();\n    },\n  };\n}\n\n/**\n * Open an embedded SQLite database using the runtime's native driver —\n * `bun:sqlite` under Bun, `node:sqlite` under Node 22.5+.\n */\nexport function openSqlite(path: string, opts: OpenSqliteOptions = {}): PortableDatabase {\n  return isBun ? openBunSqlite(path, opts) : openNodeSqlite(path, opts);\n}\n","import { chmodSync } from \"node:fs\";\nimport type { LogEntry, LogQuery, LogQueryResult } from \"@skaile/workspaces/types\";\nimport { openSqlite, type PortableDatabase, type PortableStatement } from \"./sqlite-runtime.js\";\nimport type { LogSink } from \"./types.js\";\n\nexport interface SqliteSinkOptions {\n  path: string; // ':memory:' or filesystem path\n}\n\nconst SCHEMA = `\nCREATE TABLE IF NOT EXISTS log_entries (\n  id            TEXT PRIMARY KEY,\n  timestamp     TEXT NOT NULL,\n  session_id    TEXT NOT NULL,\n  kind          TEXT NOT NULL,\n  subkind       TEXT NOT NULL,\n  instance      TEXT,\n  level         TEXT NOT NULL,\n  message       TEXT NOT NULL,\n  data_json     TEXT,\n  error_json    TEXT\n);\nCREATE INDEX IF NOT EXISTS idx_logs_timestamp ON log_entries(timestamp);\nCREATE INDEX IF NOT EXISTS idx_logs_kind_level ON log_entries(kind, level);\nCREATE INDEX IF NOT EXISTS idx_logs_source ON log_entries(kind, subkind, instance);\n`;\n\ninterface LogEntryRow {\n  id: string;\n  timestamp: string;\n  session_id: string;\n  kind: string;\n  subkind: string;\n  instance: string | null;\n  level: string;\n  message: string;\n  data_json: string | null;\n  error_json: string | null;\n}\n\nexport class SqliteSink implements LogSink {\n  private db: PortableDatabase;\n  private insertStmt: PortableStatement;\n  private insertMany: (entries: LogEntry[]) => void;\n  private closed = false;\n\n  constructor(opts: SqliteSinkOptions) {\n    this.db = openSqlite(opts.path);\n    if (opts.path !== \":memory:\") {\n      // Wait for a concurrent skaile process on the same logs.db instead of SQLITE_BUSY.\n      this.db.exec(\"PRAGMA busy_timeout = 5000\");\n      this.db.exec(\"PRAGMA journal_mode = WAL\");\n    }\n    this.db.exec(SCHEMA);\n    if (opts.path !== \":memory:\") {\n      // Group-writable so a co-grouped host process can open read-write for retention.\n      makeGroupWritable(opts.path);\n    }\n    this.insertStmt = this.db.prepare(\n      `INSERT INTO log_entries (id, timestamp, session_id, kind, subkind, instance, level, message, data_json, error_json)\n       VALUES ($id, $timestamp, $session_id, $kind, $subkind, $instance, $level, $message, $data_json, $error_json)`,\n    );\n    this.insertMany = this.db.transaction((entries: LogEntry[]) => {\n      for (const e of entries) this.insertStmt.run(this.toRow(e));\n    });\n  }\n\n  write(entry: LogEntry): void {\n    if (this.closed) return;\n    this.insertStmt.run(this.toRow(entry));\n  }\n\n  writeBatch(entries: LogEntry[]): void {\n    if (this.closed || entries.length === 0) return;\n    this.insertMany(entries);\n  }\n\n  close(): void {\n    if (this.closed) return;\n    this.closed = true;\n    this.db.close();\n  }\n\n  query(q: LogQuery): LogQueryResult {\n    if (this.closed) return { entries: [] };\n    const where: string[] = [\"session_id = $sessionId\"];\n    const params: Record<string, unknown> = { $sessionId: q.sessionId };\n\n    if (q.source?.kind) {\n      where.push(\"kind = $kind\");\n      params.$kind = q.source.kind;\n    }\n    if (q.source?.subkind) {\n      where.push(\"subkind = $subkind\");\n      params.$subkind = q.source.subkind;\n    }\n    if (q.source?.instance) {\n      where.push(\"instance = $instance\");\n      params.$instance = q.source.instance;\n    }\n    if (q.levels && q.levels.length > 0) {\n      const placeholders = q.levels.map((_, i) => `$level${i}`).join(\", \");\n      where.push(`level IN (${placeholders})`);\n      q.levels.forEach((lvl, i) => {\n        params[`$level${i}`] = lvl;\n      });\n    }\n    if (q.since) {\n      where.push(\"timestamp >= $since\");\n      params.$since = q.since;\n    }\n    if (q.until) {\n      where.push(\"timestamp < $until\");\n      params.$until = q.until;\n    }\n    if (q.search) {\n      // Escape SQL LIKE wildcards so a search for \"100%\" matches the literal string,\n      // not \"100<anything>\". \\\\ is also escaped because it's the escape character itself.\n      const escaped = q.search.replace(/[\\\\%_]/g, \"\\\\$&\");\n      where.push(\"message LIKE $search ESCAPE '\\\\'\");\n      params.$search = `%${escaped}%`;\n    }\n    if (q.cursor) {\n      where.push(\"id < $cursor\");\n      params.$cursor = q.cursor;\n    }\n\n    const limit = Math.min(q.limit ?? 500, 5000);\n    params.$limit = limit + 1;\n\n    const sql = `SELECT id, timestamp, session_id, kind, subkind, instance, level, message, data_json, error_json\n      FROM log_entries\n      WHERE ${where.join(\" AND \")}\n      ORDER BY id DESC\n      LIMIT $limit`;\n\n    const rows = this.db.prepare(sql).all<LogEntryRow>(params);\n\n    const hasMore = rows.length > limit;\n    const sliced = hasMore ? rows.slice(0, limit) : rows;\n    const entries: LogEntry[] = sliced.map((r) => ({\n      id: r.id,\n      timestamp: r.timestamp,\n      sessionId: r.session_id,\n      source: {\n        kind: r.kind as LogEntry[\"source\"][\"kind\"],\n        subkind: r.subkind,\n        instance: r.instance ?? undefined,\n      },\n      level: r.level as LogEntry[\"level\"],\n      message: r.message,\n      data: r.data_json ? JSON.parse(r.data_json) : undefined,\n      error: r.error_json ? JSON.parse(r.error_json) : undefined,\n    }));\n\n    return {\n      entries,\n      nextCursor: hasMore ? entries[entries.length - 1].id : undefined,\n    };\n  }\n\n  // Both bun:sqlite and node:sqlite bind `$name` SQL placeholders from\n  // matching `$`-prefixed object keys.\n  private toRow(e: LogEntry): Record<string, unknown> {\n    return {\n      $id: e.id,\n      $timestamp: e.timestamp,\n      $session_id: e.sessionId,\n      $kind: e.source.kind,\n      $subkind: e.source.subkind,\n      $instance: e.source.instance ?? null,\n      $level: e.level,\n      $message: e.message,\n      $data_json: e.data ? JSON.stringify(e.data) : null,\n      $error_json: e.error ? JSON.stringify(e.error) : null,\n    };\n  }\n}\n\n/**\n * Best-effort `chmod 0664` on the db file and its WAL/SHM siblings. Swallows all\n * errors (missing sibling, EPERM when not the owner) so logging never throws.\n */\nfunction makeGroupWritable(dbPath: string): void {\n  for (const p of [dbPath, `${dbPath}-wal`, `${dbPath}-shm`]) {\n    try {\n      chmodSync(p, 0o664);\n    } catch {\n      // Sibling may not exist yet, or this process may not own the file.\n      // Either way, retention degrades cleanly — never break logging.\n    }\n  }\n}\n","import { mkdirSync } from \"node:fs\";\nimport path from \"node:path\";\nimport type { LogLevel, LogStoreConfig, LogStoreMode } from \"@skaile/workspaces/types\";\nimport { LogStore } from \"./log-store.js\";\nimport { NoOpSink } from \"./sinks/no-op-sink.js\";\nimport { SqliteSink } from \"./sinks/sqlite-sink.js\";\nimport { StdoutSink } from \"./sinks/stdout-sink.js\";\n\nconst VALID_MODES: LogStoreMode[] = [\"persistent\", \"ephemeral\", \"off\"];\nconst VALID_LEVELS: LogLevel[] = [\"debug\", \"info\", \"warn\", \"error\"];\n\nexport interface ResolveLogStoreConfigInput {\n  sessionId: string;\n  workspacePath?: string;\n  yamlBlock?: Partial<{\n    mode: LogStoreMode;\n    level: LogLevel;\n    retention: { maxEntries?: number; maxAgeDays?: number };\n  }>;\n}\n\nexport function resolveLogStoreConfig(input: ResolveLogStoreConfigInput): LogStoreConfig {\n  const yaml = input.yamlBlock ?? {};\n  const envMode = process.env.SKAILE_LOG_MODE as LogStoreMode | undefined;\n  const envLevel = process.env.SKAILE_LOG_LEVEL as LogLevel | undefined;\n\n  const mode = envMode ?? yaml.mode ?? \"persistent\";\n  if (!VALID_MODES.includes(mode)) {\n    throw new Error(`Invalid logging.mode: ${mode}`);\n  }\n  const level = envLevel ?? yaml.level ?? \"info\";\n  if (!VALID_LEVELS.includes(level)) {\n    throw new Error(`Invalid logging.level: ${level}`);\n  }\n\n  return {\n    sessionId: input.sessionId,\n    workspacePath: input.workspacePath,\n    mode,\n    level,\n    retention: yaml.retention,\n  };\n}\n\nexport interface CreateLogStoreOptions {\n  /**\n   * Mirror every entry to stdout as well (default `true`, for container logs).\n   * A CLI host that already renders the entries itself passes `false` so a\n   * record is not printed twice.\n   */\n  stdout?: boolean;\n}\n\nexport function createLogStoreFromConfig(\n  cfg: LogStoreConfig,\n  opts: CreateLogStoreOptions = {},\n): LogStore {\n  const sinks = [];\n  if (cfg.mode === \"off\") {\n    sinks.push(new NoOpSink());\n  } else if (cfg.mode === \"ephemeral\") {\n    sinks.push(new SqliteSink({ path: \":memory:\" }));\n  } else {\n    if (!cfg.workspacePath) {\n      throw new Error(\"logging.mode=persistent requires workspacePath\");\n    }\n    const dir = path.join(cfg.workspacePath, \".skaile\");\n    mkdirSync(dir, { recursive: true });\n    const dbPath = path.join(dir, \"logs.db\");\n    sinks.push(new SqliteSink({ path: dbPath }));\n  }\n  // Include stdout for live container logs (dev-friendly) unless the host opts out.\n  if (opts.stdout !== false) sinks.push(new StdoutSink());\n  return new LogStore({\n    sessionId: cfg.sessionId,\n    level: cfg.level,\n    sinks,\n  });\n}\n","/**\n * Retention for the per-session structured-log SQLite store (`logs.db`).\n *\n * Mirrors the platform's `enforceLogsRetention`\n * (`platform/backend/libs/session/src/logs-retention.utils.ts`): the same\n * age-then-count semantics, batch size, pass ceiling and busy timeout. The\n * platform trims the host copy of the file once per wake; in broker mode that\n * copy is not the file the runner writes, so the runner trims its own file at\n * boot. In docker mode both trim the same file with the same rules, which is\n * harmless: a second pass finds nothing left to delete.\n */\nimport { existsSync } from \"node:fs\";\nimport type { LogStoreRetention } from \"@skaile/workspaces/types\";\nimport { isRetentionValue } from \"./retention-value.js\";\nimport { openSqlite, type PortableStatement } from \"./sinks/sqlite-runtime.js\";\n\n/** Rows removed by one {@link enforceLogsRetention} run. */\nexport interface EnforceLogsRetentionResult {\n  deletedByAge: number;\n  deletedByCount: number;\n}\n\n/**\n * The platform's cloud-mode retention defaults (docker and broker). Used when\n * `skaile.yaml` has no `logging.retention` value for a field.\n */\nexport const DEFAULT_LOGS_RETENTION: Readonly<Required<LogStoreRetention>> = Object.freeze({\n  maxEntries: 100_000,\n  maxAgeDays: 7,\n});\n\nconst DAY_MS = 86_400_000;\n\n/** Rows deleted per statement. Caps both the write lock and the loop stall. */\nconst BATCH_SIZE = 500;\n\n/**\n * Pass ceiling per statement. Concurrent inserts keep refilling the count-trim\n * delete-set, so \"loop until a short batch\" is not a guaranteed bound;\n * leftovers are trimmed on the next boot.\n */\nconst MAX_TRIM_PASSES = 200;\n\n/** Wait on a lock held by another connection instead of failing with SQLITE_BUSY. */\nconst BUSY_TIMEOUT_MS = 2_000;\n\n// `LIMIT` directly on `DELETE` needs SQLITE_ENABLE_UPDATE_DELETE_LIMIT; the\n// `id IN (SELECT ... LIMIT)` form works under both bun:sqlite and node:sqlite.\nconst AGE_TRIM_SQL = `DELETE FROM log_entries WHERE id IN (\n  SELECT id FROM log_entries WHERE timestamp < $cutoff ORDER BY id LIMIT $batch\n)`;\n\nconst COUNT_TRIM_SQL = `DELETE FROM log_entries WHERE id IN (\n  SELECT id FROM log_entries\n  WHERE id NOT IN (SELECT id FROM log_entries ORDER BY id DESC LIMIT $keep)\n  ORDER BY id LIMIT $batch\n)`;\n\n/**\n * Overlay the configured retention on {@link DEFAULT_LOGS_RETENTION}, field by\n * field. A value that is not a non-negative finite number counts as unset.\n * `0` is a valid value: `maxEntries: 0` or `maxAgeDays: 0` deletes every row,\n * as it does on the platform.\n */\nexport function resolveLogsRetention(\n  configured: LogStoreRetention | undefined,\n): Required<LogStoreRetention> {\n  return {\n    maxEntries: isRetentionValue(configured?.maxEntries)\n      ? configured.maxEntries\n      : DEFAULT_LOGS_RETENTION.maxEntries,\n    maxAgeDays: isRetentionValue(configured?.maxAgeDays)\n      ? configured.maxAgeDays\n      : DEFAULT_LOGS_RETENTION.maxAgeDays,\n  };\n}\n\nfunction yieldToEventLoop(): Promise<void> {\n  return new Promise<void>((resolve) => setImmediate(resolve));\n}\n\n/**\n * Run one bounded delete until it stops filling a batch. Each statement is its\n * own implicit transaction, so no lock is held across the yield and the\n * in-process sink can write between batches.\n */\nasync function runBoundedTrim(\n  stmt: PortableStatement,\n  params: Record<string, unknown>,\n): Promise<number> {\n  let deleted = 0;\n  for (let pass = 0; pass < MAX_TRIM_PASSES; pass++) {\n    const { changes } = stmt.run(params);\n    deleted += changes;\n    if (changes < BATCH_SIZE) break;\n    await yieldToEventLoop();\n  }\n  return deleted;\n}\n\n/**\n * Delete rows older than `maxAgeDays`, then keep at most the `maxEntries`\n * newest rows (by ULID id). Uses its own connection with a busy timeout, in\n * bounded batches that yield to the event loop between passes.\n *\n * Returns zero counts when the file does not exist or the policy is empty.\n * Other failures (lock timeout, not a log store) reject; the caller decides\n * how loud to be.\n */\nexport async function enforceLogsRetention(\n  dbPath: string,\n  retention: LogStoreRetention,\n): Promise<EnforceLogsRetentionResult> {\n  const result: EnforceLogsRetentionResult = { deletedByAge: 0, deletedByCount: 0 };\n  if (!existsSync(dbPath)) return result;\n  if (retention.maxAgeDays == null && retention.maxEntries == null) return result;\n\n  const db = openSqlite(dbPath);\n  try {\n    db.exec(`PRAGMA busy_timeout = ${BUSY_TIMEOUT_MS}`);\n    if (retention.maxAgeDays != null) {\n      const cutoff = new Date(Date.now() - retention.maxAgeDays * DAY_MS).toISOString();\n      result.deletedByAge = await runBoundedTrim(db.prepare(AGE_TRIM_SQL), {\n        $cutoff: cutoff,\n        $batch: BATCH_SIZE,\n      });\n    }\n    if (retention.maxEntries != null) {\n      result.deletedByCount = await runBoundedTrim(db.prepare(COUNT_TRIM_SQL), {\n        $keep: retention.maxEntries,\n        $batch: BATCH_SIZE,\n      });\n    }\n    return result;\n  } finally {\n    db.close();\n  }\n}\n","import type { LogEntry, LogSink } from \"@skaile/workspaces/types\";\n\n/**\n * OnLogBridgeSink — forwards every entry as a single formatted text line to\n * a legacy `onLog(line)` callback. Used as a back-compat bridge for callers\n * that historically received plain text lines from the runner.\n *\n * Format: `[level] [kind:subkind[:instance]] message [data-json] [— error.message]`\n */\nexport class OnLogBridgeSink implements LogSink {\n  constructor(private readonly onLog: (line: string) => void) {}\n\n  write(entry: LogEntry): void {\n    const tag = entry.source.instance\n      ? `${entry.source.kind}:${entry.source.subkind}:${entry.source.instance}`\n      : `${entry.source.kind}:${entry.source.subkind}`;\n    let line = `[${entry.level}] [${tag}] ${entry.message}`;\n    if (entry.data && Object.keys(entry.data).length > 0) {\n      line += ` ${JSON.stringify(entry.data)}`;\n    }\n    if (entry.error?.message) {\n      line += ` — ${entry.error.message}`;\n    }\n    this.onLog(line);\n  }\n\n  writeBatch(entries: LogEntry[]): void {\n    for (const e of entries) this.write(e);\n  }\n\n  close(): void {\n    /* no-op */\n  }\n}\n","import type { LogEntry, LogEntryEvent } from \"@skaile/workspaces/types\";\nimport type { LogSink } from \"./types.js\";\n\nexport interface WsLogSinkOptions {\n  /**\n   * Transport send callback. Typically wired to `transport.send` on the\n   * runner's `WebSocketServerTransport`. The transport already drops sends\n   * when no client is connected — this sink does not buffer.\n   */\n  send: (event: LogEntryEvent) => void;\n}\n\n/**\n * Forwards every LogEntry recorded by LogStore as a `log_entry` AgentEvent\n * over the configured transport. Used by the runner to make container-side\n * structured logs visible to the platform gateway in real time. Historical\n * reads still go through SQLite — this sink is for live tail only.\n */\nexport class WsLogSink implements LogSink {\n  private readonly send: (event: LogEntryEvent) => void;\n\n  constructor(opts: WsLogSinkOptions) {\n    this.send = opts.send;\n  }\n\n  write(entry: LogEntry): void {\n    try {\n      this.send({ type: \"log_entry\", entry });\n    } catch {\n      // Logging must never break the agent — drop on transport failure.\n    }\n  }\n\n  writeBatch(entries: LogEntry[]): void {\n    for (const e of entries) this.write(e);\n  }\n\n  close(): void {\n    /* nothing to release — transport lifecycle is owned by the caller */\n  }\n}\n"]}

package/dist/chunk-DNXPXJ3X.js.map

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* `skaile source manifest …` — curated `skaile.manifest.yaml` lifecycle for a\n * source you do NOT own. `init` generates a curated manifest from a discovery\n * run and stores it OUTSIDE the source, under the local store catalog\n * (`~/.skaile/store/manifests/<slug>.yaml`); `edit` opens it in `$EDITOR` and\n * re-validates on save. `source add`/`sync` then apply it as a read overlay\n * (see `source.ts` `refreshManifestCache`).\n *\n * `rebuild` refreshes a curated manifest after an upstream change (merge by\n * default — curation is sacred; `--overwrite` re-scans). `verify` is a\n * read-only integrity check (paths, declared hashes, schema, dep refs).\n * `publish`/`propose`/`yank` remain stubs — they need the store publish\n * endpoint (`POST /sources/<id>/manifest`), which lands in a follow-up.\n *\n * @docLink cli/commands/source#manifest\n */\n\nimport { spawnSync } from \"node:child_process\";\nimport { existsSync, readdirSync, readFileSync, writeFileSync } from \"node:fs\";\nimport * as path from \"node:path\";\nimport {\n  type AssetEntry,\n  decodeSkaileManifest,\n  encodeSkaileManifest,\n  parseAssetRef,\n  resolveSourcePublisher,\n  type SkPublishManifest,\n  type SourceEntry,\n  sourceCacheKey,\n  sourceShortName,\n  workspaceConfigFilename,\n} from \"@skaile/workspaces/core\";\nimport { computeDeterministicHash, discoverAssetsInTree } from \"@skaile/workspaces/discovery\";\nimport {\n  commitStoreManifest,\n  getStoreManifestsDir,\n  storeManifestFile,\n  writeCuratedManifest,\n} from \"@skaile/workspaces/library\";\nimport type { Command } from \"commander\";\nimport { logErr, logInfo, logOk, logWarn, S } from \"../helpers.ts\";\nimport { getKindRegistry } from \"../open-registry.ts\";\nimport {\n  ensureClone,\n  normalizeSourceUrl,\n  readProjectSources,\n  sourceClonePath,\n  sourceMatchesKey,\n} from \"./source.ts\";\n\nconst NOT_WIRED_MSG =\n  \"`skaile source manifest *` is scaffolded but not yet wired. \" +\n  \"Server-side endpoint (`POST /sources/<id>/manifest`) lands in a follow-up PR.\";\n\nfunction notWired(verb: string): never {\n  logErr(`${NOT_WIRED_MSG} (verb: source manifest ${verb})`);\n  process.exit(2);\n}\n\n/**\n * Resolve a `source manifest` argument into a `{ url, slug, dest }` triple.\n *\n * Resolution order:\n *   1. A key matching an already-registered project source (stored URL, cache\n *      key, or short slug).\n *   2. A **store slug** whose manifest already exists in\n *      `~/.skaile/store/manifests/`: the exact file name (`<host>__<owner>__<repo>` or the\n *      `<repo>-<hash>` key of a non-GitHub URL), or — for the verbs that find a manifest, not\n *      for `init` — the bare repo name of a non-GitHub URL (`srcA` for `srcA-e2d8fe81.yaml`,\n *      p1691). This MUST be tried before bare-name expansion: a bare name like `cli` would\n *      otherwise expand (via `normalizeSourceUrl`) to the skaile-ai org and a DIFFERENT slug\n *      than the one `init` wrote (e.g. `larksuite`). The slug is the exact identifier `init`'s\n *      next-step hint prints back.\n *   3. Otherwise a git URL / `owner/repo` / bare name via `normalizeSourceUrl`.\n *\n * The clone dir is the same URL-keyed cache `source add` uses.\n *\n * `ambiguous` lists the manifest slugs a bare name matched when it matched several.\n */\nexport function resolveSourceArg(\n  arg: string,\n  projectDir: string,\n  opts: { byName?: boolean } = {},\n): {\n  url: string;\n  slug: string;\n  dest: string;\n  manifestFile: string;\n  guessed: boolean;\n  ambiguous?: string[];\n} {\n  // Like `source list` / `check` / `add`: the project is `projectDir` itself, no parent search (p1860).\n  const registered: SourceEntry[] = readProjectSources(\n    path.join(path.resolve(projectDir), workspaceConfigFilename()),\n  );\n  const match = registered.find((e) => sourceMatchesKey(e, arg));\n  const found = !match ? resolveByStoreSlug(arg, opts.byName ?? true) : undefined;\n  const bySlug = found && \"url\" in found ? found : undefined;\n  const url = match ? match.url : (bySlug?.url ?? normalizeSourceUrl(arg));\n  const slug = sourceShortName(url); // human-facing label\n  const dest = sourceClonePath(sourceCacheKey(url));\n  return {\n    url,\n    slug,\n    dest,\n    manifestFile: bySlug?.manifestFile ?? storeManifestPath(url),\n    guessed: !match && !bySlug,\n    ...(found && \"ambiguous\" in found ? { ambiguous: found.ambiguous } : {}),\n  };\n}\n\n/** The slugs (file names without `.yaml`) of the curated manifests in the store. */\nfunction storeManifestSlugs(): string[] {\n  try {\n    return readdirSync(getStoreManifestsDir())\n      .filter((f) => f.endsWith(\".yaml\"))\n      .map((f) => f.slice(0, -\".yaml\".length));\n  } catch {\n    return [];\n  }\n}\n\n/** The origin URL of the clone a `<repo>-<hash>` key names, or `undefined` when none is there. */\nfunction cloneOriginUrl(key: string): string | undefined {\n  const dest = sourceClonePath(key);\n  if (!existsSync(dest)) return undefined;\n  const r = spawnSync(\"git\", [\"-C\", dest, \"remote\", \"get-url\", \"origin\"], { encoding: \"utf8\" });\n  const out = r.status === 0 ? r.stdout.trim() : \"\";\n  return out || undefined;\n}\n\n/**\n * When `arg` names a curated manifest that exists on disk, recover the source URL and point at\n * that manifest file directly. `arg` is a store slug (`<host>__<owner>__<repo>`, or the\n * `<repo>-<hash>` key `init` gives a non-GitHub URL) or, with `byName`, the bare repo name of\n * such a manifest (`srcA` for `srcA-e2d8fe81.yaml`). A GitHub manifest is never found by its bare\n * repo name: `cli` means the skaile-ai repo, not `larksuite/cli`.\n * Returns `{ ambiguous }` when a bare name matches several, and `undefined` when the arg is no\n * slug or has no manifest (fall back to URL normalization).\n */\nfunction resolveByStoreSlug(\n  arg: string,\n  byName: boolean,\n): { url: string; manifestFile: string } | { ambiguous: string[] } | undefined {\n  // A slug is our own encoding — no path/URL sigils. Anything URL/owner-repo shaped is not one.\n  if (!/^[\\w.-]+$/.test(arg)) return undefined;\n  const slugs = storeManifestSlugs();\n  let slug: string | undefined = slugs.includes(arg) ? arg : undefined;\n  if (!slug && byName) {\n    // Only the `<repo>-<hash>` file of a non-GitHub URL: a bare name never picks one org's\n    // `github.com__<org>__<repo>` manifest over the skaile-ai repo it expands to.\n    const named = slugs.filter(\n      (s) => s.startsWith(`${arg}-`) && /^[0-9a-f]{8}$/.test(s.slice(arg.length + 1)),\n    );\n    if (named.length === 1) slug = named[0];\n    else if (named.length > 1) return { ambiguous: [...named].sort() };\n  }\n  if (!slug) return undefined;\n  const manifestFile = path.join(getStoreManifestsDir(), `${slug}.yaml`);\n  if (slug.includes(\"__\")) {\n    // `<host>__<owner>__<repo>` → `https://<host>/<owner>/<repo>` — good enough to key the clone\n    // dir + re-derive the same slug; the manifest file is what edit actually opens.\n    const [host, owner, repo] = slug.split(\"__\");\n    return { url: host && owner && repo ? `https://${host}/${owner}/${repo}` : slug, manifestFile };\n  }\n  // `<repo>-<hash>`: the hash hides the URL; the clone `init` made remembers it.\n  const origin = cloneOriginUrl(slug);\n  return origin ? { url: origin, manifestFile } : undefined;\n}\n\n/**\n * The `No curated manifest …` line of a verb that needs one. A bare name that matched several\n * manifests (`ambiguous`) is told to pick a slug or the URL instead.\n */\nexport function missingManifestMessage(\n  slug: string,\n  manifestFile: string,\n  ambiguous?: readonly string[],\n): string {\n  if (ambiguous?.length) {\n    return (\n      `\"${slug}\" matches several curated manifests: ${ambiguous.join(\", \")} — ` +\n      \"pass one of these slugs or the full source URL.\"\n    );\n  }\n  return (\n    `No curated manifest for \"${slug}\" at ${S.dim(manifestFile)} — ` +\n    \"run `skaile source manifest init` first.\"\n  );\n}\n\n/**\n * Absolute path to a source's curated store manifest. Keyed by the\n * collision-free {@link storeManifestSlug} (`<host>__<owner>__<repo>`) so\n * `orgA/cli` and `orgB/cli` don't share `cli.yaml`.\n */\nfunction storeManifestPath(url: string): string {\n  return storeManifestFile(url);\n}\n\n/**\n * Directory-name segments that mark a test-fixture tree. `init`/`rebuild` drop\n * any asset whose repo-relative root contains one of these as an exact path\n * SEGMENT. Repos routinely ship fixture \"skills\" under such dirs (e.g.\n * `scripts/skill-format-check/tests`, `internal/qualitygate/skillscan/testdata/skills/lark-demo`)\n * that are not real, publishable assets.\n */\nconst TEST_FIXTURE_SEGMENTS = new Set([\n  \"tests\",\n  \"test\",\n  \"__tests__\",\n  \"testdata\",\n  \"fixtures\",\n  \"__fixtures__\",\n]);\n\n/**\n * True when an asset's repo-relative `root` sits under a test-fixture directory\n * (see {@link TEST_FIXTURE_SEGMENTS}). Conservative, not repo-specific — finer\n * curation (keeping a genuine fixture asset) stays the user's job via `edit`.\n * `init`/`rebuild`-path only; the general discovery walk (`source add`) is\n * untouched.\n */\nfunction isTestFixtureAsset(relativePath: string): boolean {\n  const segments = relativePath.replace(/\\\\/g, \"/\").split(\"/\");\n  return segments.some((s) => TEST_FIXTURE_SEGMENTS.has(s));\n}\n\n/**\n * `source manifest init <src>` — clone (if needed), run discovery, and write a\n * curated `skaile.manifest.yaml` to `~/.skaile/store/manifests/<slug>.yaml`.\n */\nasync function runInit(\n  arg: string,\n  opts: { projectDir: string; publisher?: string; dev?: boolean; force?: boolean },\n): Promise<void> {\n  const projectDir = path.resolve(opts.projectDir);\n  const {\n    url,\n    dest,\n    manifestFile: target,\n    guessed,\n  } = resolveSourceArg(arg, projectDir, {\n    byName: false,\n  });\n  // The same rule `source add` applies (p394): a bare name that is no registered source and no\n  // store slug used to expand to a made-up `skaile-ai/<name>` repo and clone it over SSH.\n  if (guessed && /^[\\w.-]+$/.test(arg.trim().replace(/\\.git$/, \"\"))) {\n    logErr(\n      `\"${arg}\" is not a git URL or an owner/repo shorthand. ` +\n        \"Use `skaile source manifest init <owner>/<repo>` or the full URL.\",\n    );\n    process.exitCode = 1;\n    return;\n  }\n\n  if (existsSync(target) && !opts.force) {\n    logWarn(\n      `A curated manifest already exists at ${S.dim(target)}. ` +\n        \"Edit it with `skaile source manifest edit`, refresh it after an upstream \" +\n        \"change with `skaile source manifest rebuild`, or pass --force to regenerate.\",\n    );\n    return;\n  }\n\n  const entry: SourceEntry = { url };\n  ensureClone(entry);\n\n  const { assets, errors } = discoverCuratableAssets(dest, opts.dev ?? false);\n\n  const publisher = opts.publisher ?? resolveSourcePublisher(dest) ?? sourceShortName(url);\n\n  const written = writeCuratedManifest({\n    manifestFile: target,\n    publisher,\n    assets,\n    force: opts.force,\n    // Init: every asset inherits the top-level repo `publisher`. Do NOT stamp a\n    // per-asset publisher — glob discovery here runs without the resolved\n    // publisher, so each DiscoveredAsset.publisher is only the clone directory\n    // name, which would clobber the intended org/`--publisher` default with\n    // junk per-asset overrides.\n    inheritPublisher: true,\n  });\n\n  if (!written.wrote) {\n    logWarn(\n      `Curated manifest already exists at ${S.dim(target)} — not overwritten. ` +\n        \"Pass --force to regenerate.\",\n    );\n    return;\n  }\n\n  commitStoreManifest(\n    target,\n    `manifest init: ${sourceShortName(url)} (${written.assetCount} assets)`,\n  );\n  logOk(`Wrote curated manifest with ${written.assetCount} assets to ${S.dim(target)}.`);\n  // `edit` takes the <src> the user passed (`resolveSourceArg` maps it back to this\n  // manifest), but `source add` needs the URL: a bare name there is no source.\n  logInfo(\n    `Edit it with \\`skaile source manifest edit ${arg}\\`, then ` +\n      `\\`skaile source add ${url}\\` to consume it.`,\n  );\n  if (errors.length > 0) {\n    logWarn(`${errors.length} discovery error(s) — inspect the manifest before consuming.`);\n  }\n}\n\n/**\n * Run discovery over a clone and drop the test-fixture assets (see\n * {@link isTestFixtureAsset}). Shared by `init` and `rebuild` so both paths\n * produce an identical inventory from the same tree.\n */\nfunction discoverCuratableAssets(\n  dest: string,\n  includeDev: boolean,\n): { assets: ReturnType<typeof discoverAssetsInTree>[\"assets\"]; errors: string[] } {\n  const result = discoverAssetsInTree(dest, {\n    registry: getKindRegistry(),\n    includeDev,\n  });\n  const assets = result.assets.filter((a) => !isTestFixtureAsset(a.relativePath));\n  return { assets, errors: result.errors.map((e) => `${e.path}: ${e.error}`) };\n}\n\n/**\n * Best-effort `git pull --ff-only` on an existing clone. Never throws: a pull\n * failure (offline, diverged, detached) is warned and the caller continues with\n * the clone as-is.\n */\nfunction pullCloneFfOnly(dest: string): void {\n  const res = spawnSync(\"git\", [\"-C\", dest, \"pull\", \"--ff-only\"], { stdio: \"pipe\" });\n  if (res.status !== 0) {\n    logWarn(\n      \"git pull --ff-only failed — continuing with the existing clone \" +\n        \"(it may be behind upstream).\",\n    );\n  }\n}\n\n/**\n * Repo-relative `root` path for a manifest asset entry — the merge match key\n * between an existing curated entry and a freshly-discovered asset. `root:`\n * entries use their declared path; a `files:`-only entry (rare for a curated\n * sidecar) falls back to the entry's dirname of the first file, else the name.\n */\nfunction entryRootKey(entry: AssetEntry): string {\n  if (entry.root) return entry.root.replace(/\\\\/g, \"/\").replace(/\\/+$/, \"\");\n  const files = entry.files;\n  if (files && files.length > 0) {\n    const first = typeof files[0] === \"string\" ? files[0] : files[0].path;\n    const dir = path.posix.dirname(first.replace(/\\\\/g, \"/\"));\n    return dir === \".\" ? entry.name : dir;\n  }\n  return entry.name;\n}\n\n/** Repo-relative `root` path a discovered asset maps to (matches init's writer). */\nfunction discoveredRootKey(relativePath: string): string {\n  const dir = path.posix.dirname(relativePath.replace(/\\\\/g, \"/\"));\n  return dir === \".\" ? path.posix.basename(relativePath.replace(/\\\\/g, \"/\")) : dir;\n}\n\n/** Human ref for reporting: `kind:name`. */\nfunction entryRef(entry: AssetEntry): string {\n  return `${entry.kind}:${entry.name}`;\n}\n\n/**\n * `source manifest rebuild <src>` — refresh a curated manifest after the\n * upstream repo changed. MERGE is the default (curation is sacred); `--overwrite`\n * re-scans from scratch with `init --force` semantics.\n *\n * Merge algorithm (match by repo-relative `root` path):\n *   - Existing entries whose root is STILL discovered → KEPT verbatim (all\n *     hand-edits preserved).\n *   - Existing entries whose root is GONE upstream → DROPPED (reported).\n *   - Freshly-discovered assets not already in the manifest → NOT auto-added,\n *     only REPORTED (a curated foreign sidecar must not silently absorb new\n *     upstream skills). An asset the curator deliberately dropped stays dropped\n *     because it is neither in the existing manifest nor re-added here.\n */\nasync function runRebuild(\n  arg: string,\n  opts: { projectDir: string; publisher?: string; dev?: boolean; overwrite?: boolean },\n): Promise<void> {\n  const projectDir = path.resolve(opts.projectDir);\n  const { url, dest, slug, manifestFile: target, ambiguous } = resolveSourceArg(arg, projectDir);\n\n  if (!existsSync(target)) {\n    logErr(missingManifestMessage(slug, target, ambiguous));\n    process.exit(1);\n  }\n\n  // Update the clone: clone if absent, else pull --ff-only (best-effort).\n  const entry: SourceEntry = { url };\n  const cloned = ensureClone(entry);\n  if (!cloned) pullCloneFfOnly(dest);\n\n  const { assets: freshAssets, errors } = discoverCuratableAssets(dest, opts.dev ?? false);\n\n  if (opts.overwrite) {\n    logWarn(\n      \"--overwrite: replacing the curated manifest with a full fresh inventory. \" +\n        \"All hand-curation (dropped assets, per-asset edits) is discarded.\",\n    );\n    const publisher = opts.publisher ?? resolveSourcePublisher(dest) ?? sourceShortName(url);\n    const written = writeCuratedManifest({\n      manifestFile: target,\n      publisher,\n      assets: freshAssets,\n      force: true,\n      inheritPublisher: true,\n    });\n    commitStoreManifest(\n      target,\n      `manifest rebuild --overwrite: ${slug} (${written.assetCount} assets)`,\n    );\n    logOk(\n      `Rebuilt curated manifest with ${written.assetCount} assets to ${S.dim(target)} (overwrite).`,\n    );\n    if (errors.length > 0) {\n      logWarn(`${errors.length} discovery error(s) — inspect the manifest before consuming.`);\n    }\n    return;\n  }\n\n  // MERGE (default). `--publisher` only applies to the full re-derive path.\n  if (opts.publisher) {\n    logWarn(\n      \"--publisher is ignored in merge mode (the curated publisher is preserved). \" +\n        \"Use --overwrite to re-derive the publisher from a full re-scan.\",\n    );\n  }\n\n  // Read the existing curated manifest and keep it as the base.\n  const { manifest: existing } = decodeSkaileManifest(readFileSync(target, \"utf-8\"));\n  const existingEntries = existing.assets ?? [];\n\n  // Index fresh discovery by repo-relative root path.\n  const freshByRoot = new Map<string, (typeof freshAssets)[number]>();\n  for (const a of freshAssets) freshByRoot.set(discoveredRootKey(a.relativePath), a);\n\n  const kept: AssetEntry[] = [];\n  const dropped: string[] = [];\n  for (const e of existingEntries) {\n    if (freshByRoot.has(entryRootKey(e))) kept.push(e);\n    else dropped.push(entryRef(e));\n  }\n\n  // Fresh assets not already curated → report as available, do NOT add.\n  const existingRoots = new Set(existingEntries.map(entryRootKey));\n  const newlyAvailable: string[] = [];\n  for (const a of freshAssets) {\n    if (!existingRoots.has(discoveredRootKey(a.relativePath))) {\n      newlyAvailable.push(`${a.kind}:${a.name}`);\n    }\n  }\n\n  const changed = dropped.length > 0;\n  if (dropped.length > 0) {\n    logWarn(`removed (gone upstream): ${dropped.sort().join(\", \")}`);\n  }\n  if (newlyAvailable.length > 0) {\n    logInfo(\n      `${newlyAvailable.length} new upstream asset(s) available (not added): ` +\n        `${newlyAvailable.sort().join(\", \")} — add with \\`skaile source manifest edit ${arg}\\` if wanted`,\n    );\n  }\n\n  if (!changed) {\n    logOk(\"already up to date\");\n    if (errors.length > 0) {\n      logWarn(`${errors.length} discovery error(s) — inspect the source before re-consuming.`);\n    }\n    return;\n  }\n\n  const merged: SkPublishManifest = { ...existing, assets: kept };\n  writeFileSync(target, encodeSkaileManifest(merged), \"utf-8\");\n  commitStoreManifest(\n    target,\n    `manifest rebuild: ${slug} (kept ${kept.length}, dropped ${dropped.length})`,\n  );\n  logOk(\n    `Rebuilt curated manifest: kept ${kept.length}, dropped ${dropped.length} → ${S.dim(target)}.`,\n  );\n  if (errors.length > 0) {\n    logWarn(`${errors.length} discovery error(s) — inspect the source before re-consuming.`);\n  }\n}\n\n/**\n * `source manifest verify <src>` — READ-ONLY integrity check of a curated\n * manifest against its clone. Writes nothing. Exit 0 when no errors; with\n * `--strict`, any warning also forces a nonzero exit.\n *\n * Per-asset checks:\n *   - `root`/`files` paths still exist upstream (missing → error).\n *   - A declared `sha256` recomputes to the same deterministic hash (mismatch → error).\n *   - Schema decode diagnostics map to errors/warnings.\n *   - Dependency refs parse via `parseAssetRef` (malformed → warning).\n */\nasync function runVerify(\n  arg: string,\n  opts: { projectDir: string; strict?: boolean },\n): Promise<void> {\n  const projectDir = path.resolve(opts.projectDir);\n  const { url, dest, slug, manifestFile: target, ambiguous } = resolveSourceArg(arg, projectDir);\n\n  if (!existsSync(target)) {\n    logErr(missingManifestMessage(slug, target, ambiguous));\n    process.exit(1);\n  }\n\n  // Ensure a clone exists to verify paths/hashes against (best-effort; no pull).\n  ensureClone({ url });\n\n  const text = readFileSync(target, \"utf-8\");\n  const { manifest, diagnostics } = decodeSkaileManifest(text);\n\n  const errors: string[] = [];\n  const warnings: string[] = [];\n\n  // Schema diagnostics from the decoder.\n  for (const d of diagnostics) {\n    const line = `${d.code}: ${d.message}`;\n    if (d.severity === \"error\") errors.push(line);\n    else warnings.push(line);\n  }\n\n  const assets = manifest.assets ?? [];\n  for (const entry of assets) {\n    const ref = entryRef(entry);\n\n    // Path existence: `root` dir and/or each `files[]` path.\n    const relPaths: string[] = [];\n    if (entry.root) relPaths.push(entry.root);\n    if (entry.files) {\n      for (const f of entry.files) relPaths.push(typeof f === \"string\" ? f : f.path);\n    }\n    if (relPaths.length === 0) relPaths.push(entry.name);\n    for (const rel of relPaths) {\n      if (!existsSync(path.join(dest, rel))) {\n        errors.push(`${ref}: path not found upstream: ${rel}`);\n      }\n    }\n\n    // Declared sha256 → recompute + compare, but ONLY for granular `files:`\n    // entries. Discovery (`discover-manifest.ts`) anchors a `files:`-only entry\n    // at the REPO ROOT and hashes the files VERBATIM as repo-relative strings\n    // (the path is folded into the digest), so verify must hash the same way:\n    // `assetRoot = dest`, files kept repo-relative — NOT rebased onto the root.\n    // A `root:` entry cannot be verified this way (discovery hashes only the\n    // per-kind filtered set, not the whole-dir walk), and the writer never emits\n    // sha256 for `root:` entries, so skip the hash check for them.\n    if (entry.sha256) {\n      if (entry.files && entry.files.length > 0) {\n        const hashFiles = entry.files.map((f) =>\n          (typeof f === \"string\" ? f : f.path).replace(/\\\\/g, \"/\"),\n        );\n        const actual = computeDeterministicHash(dest, hashFiles);\n        if (actual !== entry.sha256) {\n          errors.push(\n            `${ref}: sha256 mismatch (declared ${entry.sha256.slice(0, 12)}…, got ${actual.slice(0, 12)}…)`,\n          );\n        }\n      } else {\n        warnings.push(\n          `${ref}: declared sha256 on a root:-mode entry is not verifiable (discovery hashes only the per-kind filtered set) — skipped`,\n        );\n      }\n    }\n\n    // Dependency refs parse.\n    for (const dep of entry.dependencies ?? []) {\n      try {\n        parseAssetRef(dep);\n      } catch (err) {\n        warnings.push(\n          `${ref}: malformed dependency \"${dep}\": ${err instanceof Error ? err.message : String(err)}`,\n        );\n      }\n    }\n  }\n\n  for (const w of warnings) logWarn(w);\n  for (const e of errors) logErr(e);\n\n  if (errors.length === 0) {\n    logOk(`verified ${assets.length} asset(s).`);\n  } else {\n    logErr(`${errors.length} issue(s).`);\n  }\n\n  const failStrict = opts.strict && warnings.length > 0;\n  if (errors.length > 0 || failStrict) process.exit(1);\n}\n\n/**\n * Split a `$VISUAL`/`$EDITOR` value into `{ command, args }` and append the file\n * as the final arg. The env value is a full command line, not a bare binary —\n * `EDITOR=\"code --wait\"` must spawn `code` with `[\"--wait\", <file>]`, and\n * `EDITOR=code` (which returns before save) is the user's problem, not ours.\n * A whitespace split covers the common editors (`code --wait`, `code -w`,\n * `subl -w`, `vi`); paths with embedded spaces are not supported (rare for an\n * editor binary and out of scope). Falls back to `vi` when unset/empty.\n *\n * @docLink cli/commands/source#manifest-edit\n */\nexport function resolveEditorCommand(\n  editorEnv: string | undefined,\n  target: string,\n): { command: string; args: string[] } {\n  const parts = (editorEnv ?? \"\").trim().split(/\\s+/).filter(Boolean);\n  const [command, ...rest] = parts.length > 0 ? parts : [\"vi\"];\n  return { command: command as string, args: [...rest, target] };\n}\n\n/** Minimal spawn contract runEdit needs — lets tests inject a fake. */\ntype SpawnLike = (\n  command: string,\n  args: string[],\n  opts: { stdio: \"inherit\" },\n) => { status: number | null };\n\n/**\n * `source manifest edit <src>` — open the curated store manifest in `$EDITOR`\n * and re-validate on save. Warnings are surfaced but never hard-fail.\n *\n * `spawn` is injectable so tests can assert the argv without launching a real\n * editor; production passes the default `spawnSync`.\n */\nexport function runEdit(\n  arg: string,\n  opts: { projectDir: string },\n  spawn: SpawnLike = spawnSync as unknown as SpawnLike,\n): void {\n  const projectDir = path.resolve(opts.projectDir);\n  const { slug, manifestFile: target, ambiguous } = resolveSourceArg(arg, projectDir);\n\n  if (!existsSync(target)) {\n    logErr(missingManifestMessage(slug, target, ambiguous));\n    process.exit(1);\n  }\n\n  const { command, args } = resolveEditorCommand(process.env.VISUAL || process.env.EDITOR, target);\n  const res = spawn(command, args, { stdio: \"inherit\" });\n  if (res.status !== 0 && res.status !== null) {\n    logErr(`Editor exited with status ${res.status}.`);\n    process.exit(1);\n  }\n\n  commitStoreManifest(target, `manifest edit: ${slug}`);\n\n  // Re-validate the saved file; surface diagnostics as warnings, don't hard-fail.\n  const { diagnostics } = decodeSkaileManifest(readFileSync(target, \"utf-8\"));\n  const errors = diagnostics.filter((d) => d.severity === \"error\");\n  const warnings = diagnostics.filter((d) => d.severity !== \"error\");\n  if (errors.length > 0) {\n    for (const d of errors) logErr(`${d.code}: ${d.message}`);\n    logWarn(\"Manifest has errors — fix them before `skaile source add` will consume it.\");\n  } else if (warnings.length > 0) {\n    for (const d of warnings) logWarn(`${d.code}: ${d.message}`);\n    logOk(\"Saved (with warnings).\");\n  } else {\n    logOk(\"Saved.\");\n  }\n}\n\n/**\n * Append the `manifest` sub-tree to a `source` command.\n *\n * Called from `makeSourceCommand()` in `source.ts`.\n */\nexport function addSourceManifestCommands(src: Command): void {\n  // enablePositionalOptions so options on the leaf verb (`source manifest init\n  // --publisher …`) route to that verb instead of being rejected by `manifest`.\n  const manifest = src\n    .command(\"manifest\")\n    .description(\"Curated manifest lifecycle for a source\")\n    .enablePositionalOptions();\n\n  manifest\n    .command(\"init <src>\")\n    .description(\"Generate a curated manifest for a source (stored in the local store catalog)\")\n    .option(\"-C, --project-dir <dir>\", \"Project directory\", process.cwd())\n    .option(\"--publisher <name>\", \"Override the publisher (default: source's GitHub org)\")\n    .option(\"--dev\", \"Include assets under the source's dev_paths\", false)\n    .option(\"--force\", \"Overwrite an existing curated manifest\", false)\n    .action((arg, opts) => runInit(arg, opts));\n\n  manifest\n    .command(\"edit <src>\")\n    .description(\"Open the curated manifest in $EDITOR and re-validate on save\")\n    .option(\"-C, --project-dir <dir>\", \"Project directory\", process.cwd())\n    .action((arg, opts) => runEdit(arg, opts));\n\n  manifest\n    .command(\"rebuild <src>\")\n    .description(\n      \"Refresh a curated manifest after an upstream change (merge by default: \" +\n        \"keeps curation, drops assets gone upstream, reports new ones without adding)\",\n    )\n    .option(\"-C, --project-dir <dir>\", \"Project directory\", process.cwd())\n    .option(\"--publisher <name>\", \"Override the publisher (--overwrite only)\")\n    .option(\"--dev\", \"Include assets under the source's dev_paths\", false)\n    .option(\"--overwrite\", \"Discard curation and re-scan the full inventory\", false)\n    .action((arg, opts) => runRebuild(arg, opts));\n\n  manifest\n    .command(\"verify <src>\")\n    .description(\"Verify hashes, deps, and schema (read-only)\")\n    .option(\"-C, --project-dir <dir>\", \"Project directory\", process.cwd())\n    .option(\"--strict\", \"Fail on advisory checks (warnings force a nonzero exit)\", false)\n    .action((arg, opts) => runVerify(arg, opts));\n\n  manifest\n    .command(\"publish <src>\")\n    .description(\"Push the curated sidecar manifest and publish it to the store\")\n    .option(\"-C, --project-dir <dir>\", \"Project directory\", process.cwd())\n    .option(\"--as <namespace>\", \"Publisher namespace (default: your store username)\")\n    .option(\"--sidecar-repo <url>\", \"Public GitHub repo you own to hold the curated manifest\")\n    .option(\"--ref <gitref>\", \"Foreign source ref to ingest (branch/sha; default: main)\")\n    .option(\"--dry-run\", \"Print the publish plan without pushing or calling the store\", false)\n    .action(async (arg, opts) => {\n      const { runPublish } = await import(\"./source-manifest-publish.ts\");\n      await runPublish(arg, opts);\n    });\n\n  manifest\n    .command(\"propose <src>\")\n    .description(\"Open a PR to upstream with the sidecar manifest\")\n    .action(() => notWired(\"propose\"));\n\n  manifest\n    .command(\"yank <src>\")\n    .description(\"Retract the source's published assets from the store\")\n    .option(\"-C, --project-dir <dir>\", \"Project directory\", process.cwd())\n    .option(\"--asset <ref>\", \"Yank only the asset matching this ref/name\")\n    .action(async (arg, opts) => {\n      const { runYank } = await import(\"./source-manifest-publish.ts\");\n      await runYank(arg, opts);\n    });\n}\n","/**\n * `skaile source …` — manage github sources for the current project.\n *\n * A *source* is a third-party github repo of AI assets. The project's\n * `skaile.yaml` `sources:` array is the source of truth for which sources\n * this project uses. The clone itself lives at\n * `<cache root>/sources/<host>/<owner>/<repo>/` (`~/.skaile/cache` unless `SKAILE_HOME` or\n * `SKAILE_CACHE_DIR` moves it; machine-global cache, shared across projects, URL-keyed so\n * cross-org repos never collide), and the manifest is mirrored into `<skaile home>/index.db`\n * (machine-global manifest cache).\n *\n * @docLink cli/commands/source\n */\n\nimport { spawnSync } from \"node:child_process\";\nimport {\n  existsSync,\n  mkdirSync,\n  readdirSync,\n  realpathSync,\n  renameSync,\n  rmdirSync,\n  rmSync,\n  statSync,\n} from \"node:fs\";\nimport * as os from \"node:os\";\nimport * as path from \"node:path\";\nimport {\n  attachToBranch,\n  buildProvenanceIndex,\n  discardUnclonedSourceDir,\n  getGlobalCacheDir,\n  getRepoCommit,\n  globalCacheRoot,\n  globalSkaileDir,\n  isSourceCloned,\n  priorSourceCacheKeys,\n  resolveSkWorkspaceConfig,\n  resolveSourcePublisher,\n  type SourceEntry,\n  sourceCacheKey,\n  sourceShortName,\n  WorkspaceYamlEditor,\n  workspaceConfigFilename,\n} from \"@skaile/workspaces/core\";\nimport { AssetManager } from \"@skaile/workspaces/asset-manager\";\nimport { curatedManifestOverlay, LocalCatalogSource } from \"@skaile/workspaces/library\";\nimport * as p from \"@clack/prompts\";\nimport { Command } from \"commander\";\nimport { logErr, logInfo, logNoProject, logOk, logWarn, S } from \"../helpers.ts\";\nimport { openLibraryManager } from \"../open-library.ts\";\nimport { getKindRegistry, getKnownKinds } from \"../open-registry.ts\";\nimport { requireValidPublisherOrExit } from \"./library-index.ts\";\nimport { addSourceManifestCommands } from \"./source-manifest.ts\";\n\n/**\n * Clone dir for one source cache key (`<host>/<owner>/<repo>`). Exported for the\n * cache-path regression test. Callers pass `sourceCacheKey(url)`.\n */\nexport function sourceClonePath(key: string): string {\n  return path.join(getGlobalCacheDir(), key);\n}\n\nconst SKAILE_MANIFEST_FILENAME = \"skaile.manifest.yaml\";\nconst LEGACY_SOURCE_CONFIG_FILENAME = \".skaile-source.yaml\";\n\n/**\n * Whether a manifest-cache refresh actually failed to index something. Keyed on\n * `errors`, NOT on `assetsUpdated < assetsFound`: the discovery walk counts\n * presets (and other intentionally-not-cataloged kinds) toward `assetsFound` but\n * never upserts them, so a source shipping a `.preset.yaml` would otherwise read\n * as a partial failure — false `! N asset(s) failed to index` + exit 1 — with\n * zero real errors.\n */\nexport function indexingHadFailures(result: { errors: string[] }): boolean {\n  return result.errors.length > 0;\n}\n\n/**\n * A clone that ships only the legacy `.skaile-source.yaml` (no\n * `skaile.manifest.yaml`) has its declared `publisher_default` silently ignored\n * — discovery only reads `skaile.manifest.yaml`, so publisher resolution falls\n * back to the first path segment. Surface a hint so the author can fix it.\n */\nexport function legacySourceConfigHint(dest: string): string | undefined {\n  const hasLegacy = existsSync(path.join(dest, LEGACY_SOURCE_CONFIG_FILENAME));\n  const hasManifest = existsSync(path.join(dest, SKAILE_MANIFEST_FILENAME));\n  if (hasLegacy && !hasManifest) {\n    return (\n      `This source ships a legacy ${LEGACY_SOURCE_CONFIG_FILENAME} but no ` +\n      `${SKAILE_MANIFEST_FILENAME}; its declared publisher is ignored and assets ` +\n      `are published under their first path segment. Add a ${SKAILE_MANIFEST_FILENAME} ` +\n      `(\\`skaile source manifest init\\`) to set the publisher and asset inventory.`\n    );\n  }\n  return undefined;\n}\n\n/**\n * The one spelling of a full git URL or scp-style spec: trailing slashes dropped, scheme and\n * host in lower case (userinfo, path and a `.git` suffix stay as typed). `…/skillz.git/` and\n * `HTTPS://GitHub.com/o/skillz.git` are the source `…/skillz.git` already is (p891, p722).\n */\nfunction canonicalGitUrl(spec: string): string {\n  const noSlash = spec.replace(/\\/+$/, \"\");\n  const url = /^([a-z][a-z0-9+.-]*):\\/\\/([^/]*)(.*)$/i.exec(noSlash);\n  if (url) {\n    const scheme = (url[1] ?? \"\").toLowerCase();\n    // A `file://` path with `.`, `..` or `//` segments is the one repository its folded path\n    // names: `file:///a/r1/../remotes/x.git` is `file:///a/remotes/x.git` (p1856).\n    if (scheme === \"file\" && url[2] === \"\" && /(?:^|\\/)\\.\\.?(?:\\/|$)|\\/\\//.test(url[3] ?? \"\")) {\n      return `file://${path.posix.normalize(url[3] ?? \"\")}`;\n    }\n    const authority = url[2] ?? \"\";\n    const at = authority.lastIndexOf(\"@\");\n    const host = authority.slice(at + 1).toLowerCase();\n    return `${scheme}://${authority.slice(0, at + 1)}${host}${url[3] ?? \"\"}`;\n  }\n  const scp = /^(git@)([^:]+):(.*)$/.exec(noSlash);\n  return scp ? `${scp[1]}${(scp[2] ?? \"\").toLowerCase()}:${scp[3] ?? \"\"}` : noSlash;\n}\n\n/**\n * Normalize a `source add` argument into a clonable git URL. Full URLs and\n * scp-style (`git@host:…`) specs keep their form but get the canonical spelling of\n * {@link canonicalGitUrl}; a local path (`/abs`, `./rel`,\n * `../rel`, `~/x`) becomes an absolute, normalised path so the same repo added from two\n * directories is one source and a clone never depends on the cwd; an `owner/repo`\n * shorthand and a bare repo name expand to GitHub over SSH — a bare name\n * defaults to the `skaile-ai` org (`git@github.com:skaile-ai/<name>.git`).\n */\nexport function normalizeSourceUrl(input: string): string {\n  const s = input.trim();\n  if (/^(?:https?|git|ssh|file):\\/\\//.test(s) || /^git@/.test(s)) return canonicalGitUrl(s);\n  if (/^(?:\\/|\\.{1,2}(?:\\/|$)|~\\/)/.test(s)) {\n    const abs = path.resolve(s.startsWith(\"~/\") ? path.join(os.homedir(), s.slice(2)) : s);\n    // The same folder reached through a symlink (macOS `/var` → `/private/var`) is one source.\n    try {\n      return realpathSync(abs);\n    } catch {\n      return abs;\n    }\n  }\n  const repo = s.replace(/\\.git$/, \"\");\n  if (/^[\\w.-]+\\/[\\w.-]+$/.test(repo)) return `git@github.com:${repo}.git`;\n  if (/^[\\w.-]+$/.test(repo)) return `git@github.com:skaile-ai/${repo}.git`;\n  return s;\n}\n\n/**\n * Match a stored source against a user-supplied key. Mirrors the shortcut\n * expansion `source add` applies (`normalizeSourceUrl`) so any form that `add`\n * accepted — bare name, `owner/repo`, `.git`-suffixed, full URL — also resolves\n * at `sync`/`show`/`remove` time, not just the raw stored URL or derived slug.\n */\nexport function sourceMatchesKey(entry: SourceEntry, key: string): boolean {\n  if (entry.url === key) return true;\n  if (sourceCacheKey(entry.url) === key || sourceShortName(entry.url) === key) return true;\n  return entry.url === normalizeSourceUrl(key);\n}\n\n/**\n * Name a source in output: its repo short name, or its clone-cache key when\n * another source in the project shares that short name (two `skillz` repos of\n * different owners). The key is unique per URL and `source show`/`remove` accept it.\n */\nexport function sourceLabel(entry: SourceEntry, all: readonly SourceEntry[]): string {\n  const short = sourceShortName(entry.url);\n  const shared = all.some((s) => s.url !== entry.url && sourceShortName(s.url) === short);\n  return shared ? sourceCacheKey(entry.url) : short;\n}\n\n/** Outcome of {@link resolveSource}. */\nexport type SourceResolution =\n  | { kind: \"one\"; entry: SourceEntry }\n  | { kind: \"ambiguous\"; entries: SourceEntry[] }\n  | { kind: \"none\" };\n\n/**\n * `true` for a source on this machine: an absolute path or a `file://` URL. The two spellings of\n * one repository share a clone-cache key and are one source (p618).\n */\nfunction isLocalSourceUrl(url: string): boolean {\n  return url.startsWith(\"/\") || url.startsWith(\"file://\");\n}\n\n/**\n * Pick the one source `key` names. Exact forms win over names: the stored URL,\n * then the cache key, then the repo short name or a `source add` shortcut, then the other\n * spelling of a local repository (`file:///x/r.git` for a source added as `/x/r.git`). A\n * name that several sources share (`skillz` from two owners) is `ambiguous`\n * instead of silently picking the first.\n */\nexport function resolveSource(sources: readonly SourceEntry[], key: string): SourceResolution {\n  const tiers: ((s: SourceEntry) => boolean)[] = [\n    (s) => s.url === key,\n    (s) => sourceCacheKey(s.url) === key,\n    (s) => sourceShortName(s.url) === key || s.url === normalizeSourceUrl(key),\n    (s) =>\n      isLocalSourceUrl(key) &&\n      isLocalSourceUrl(s.url) &&\n      realLocalCacheKey(s.url) === realLocalCacheKey(normalizeSourceUrl(key)),\n  ];\n  for (const tier of tiers) {\n    const hits = sources.filter(tier);\n    if (hits.length === 1) return { kind: \"one\", entry: hits[0] };\n    if (hits.length > 1) return { kind: \"ambiguous\", entries: hits };\n  }\n  return { kind: \"none\" };\n}\n\nfunction exitAmbiguousSource(key: string, entries: readonly SourceEntry[]): never {\n  logErr(`\"${key}\" matches ${entries.length} sources; pass the URL of the one you mean:`);\n  for (const e of entries) console.error(`    ${e.url}`);\n  process.exit(1);\n}\n\n/**\n * git's stderr as one line: every line but the `hint:` advice and the\n * `From <url>` / ` * branch …` fetch progress, joined by spaces. Keeps the\n * cause (`fatal: '<path>' does not appear to be a git repository`).\n */\nfunction pullFailureReason(stderr: string): string {\n  return stderr\n    .split(\"\\n\")\n    .map((l) => l.trim())\n    .filter((l) => l !== \"\" && !/^(hint:|From |[*+=!-] )/.test(l))\n    .join(\" \");\n}\n\n/** The advisory a reference lint raises for a file the asset filter leaves out. */\nconst FILTER_ADVISORY = \"not captured by the file filter\";\n\n/**\n * Print the advisories of one indexing run. The reference notes about files outside the asset\n * filter are one line with a count unless `verbose`; every other advisory stays on its own line\n * (p1031: a source such as ai-assets printed 77 of them on every sync).\n */\nfunction logAdvisories(advisories: readonly string[], verbose: boolean, slug?: string): void {\n  const prefix = slug ? `${slug}: ` : \"\";\n  const filtered = advisories.filter((a) => a.includes(FILTER_ADVISORY));\n  for (const advisory of advisories) {\n    if (verbose || !advisory.includes(FILTER_ADVISORY)) logInfo(`${prefix}${advisory}`);\n  }\n  if (!verbose && filtered.length > 0) {\n    logInfo(\n      `${prefix}${filtered.length} referenced file${filtered.length === 1 ? \"\" : \"s\"} outside the asset filter (pass --verbose to list them)`,\n    );\n  }\n}\n\n/**\n * Find an already-registered source that maps to the same cache key as `url`\n * but is stored under a *different* URL string (e.g. the `.git`-suffixed or\n * scp form of the same remote). Two such entries would fight over one clone\n * dir, so `source add` rejects the ambiguity. Returns the colliding entry, or\n * `undefined` when the URL is unique or only matches an exact-string duplicate\n * (which `setSource` updates in place).\n */\nexport function findCacheKeyCollision(\n  sources: SourceEntry[],\n  url: string,\n): SourceEntry | undefined {\n  const key = realLocalCacheKey(url);\n  return sources.find((s) => s.url !== url && realLocalCacheKey(s.url) === key);\n}\n\n/**\n * The clone-cache key of `url`; a repository on this machine is keyed by its real path, so a\n * symlinked spelling (`/var/x` for `/private/var/x`) is the same source (p618).\n */\nfunction realLocalCacheKey(url: string): string {\n  const local = url.startsWith(\"file://\") ? url.slice(\"file://\".length) : url;\n  if (local.startsWith(\"/\") && existsSync(local)) {\n    try {\n      return sourceCacheKey(realpathSync(local));\n    } catch {\n      // fall through to the spelling\n    }\n  }\n  return sourceCacheKey(url);\n}\n\n/**\n * `projectDir` when it holds its own `skaile.yaml`, else `undefined`. Like `list`, `check` and\n * `add`, the `source` commands never search parent directories (p1860).\n */\nfunction projectRootOf(projectDir: string): string | undefined {\n  const dir = path.resolve(projectDir);\n  return existsSync(path.join(dir, workspaceConfigFilename())) ? dir : undefined;\n}\n\n/** The `skaile.yaml` path of `projectDir`; stops with the `No skaile.yaml found` lines when it has none. */\nfunction requireProjectYamlPath(projectDir: string): string {\n  const root = projectRootOf(projectDir);\n  if (!root) {\n    logNoProject(projectDir);\n    process.exit(1);\n  }\n  return path.join(root, workspaceConfigFilename());\n}\n\n/**\n * Load `skaile.yaml` for a `source` command. A file that does not parse stops the command with\n * the one `<file> — parse error: <reason>` line `check` and `install` print: it is not \"no\n * sources\", and nothing is written to it (p1421).\n */\nexport function loadProjectEditor(yamlPath: string): WorkspaceYamlEditor {\n  try {\n    return WorkspaceYamlEditor.load(yamlPath);\n  } catch (err) {\n    const message = err instanceof Error ? err.message : String(err);\n    logErr(/ — parse error: /.test(message) ? message : `Could not read ${yamlPath}: ${message}`);\n    process.exit(1);\n  }\n}\n\nexport function readProjectSources(yamlPath: string): SourceEntry[] {\n  if (!existsSync(yamlPath)) return [];\n  try {\n    return loadProjectEditor(yamlPath).getSources();\n  } catch (err) {\n    logErr(`Could not read ${yamlPath}: ${err instanceof Error ? err.message : String(err)}`);\n    process.exit(1);\n  }\n}\n\n/** Remove the empty `<owner>` / `<host>` directories a failed clone left under `sources/`. */\nfunction pruneEmptyCloneParents(dest: string): void {\n  let dir = path.dirname(dest);\n  while (path.basename(dir) !== \"sources\" && dir !== path.dirname(dir)) {\n    try {\n      if (readdirSync(dir).length > 0) return;\n      rmdirSync(dir);\n    } catch {\n      return;\n    }\n    dir = path.dirname(dir);\n  }\n}\n\n/**\n * Clone the source if its clone directory does not yet exist. When `force` is\n * set, the existing clone is replaced by a fresh checkout. Returns true when a\n * clone happened. The cache slug is derived from the URL.\n *\n * A `--force` re-clone moves the old clone aside first and only deletes it once\n * the fresh clone succeeds — so a failed re-clone restores the previous clone\n * rather than leaving the source registered with no cache behind it.\n */\nexport function ensureClone(entry: SourceEntry, opts: { force?: boolean } = {}): boolean {\n  const dest = sourceClonePath(sourceCacheKey(entry.url));\n  let backup: string | undefined;\n  if (!isSourceCloned(dest)) discardUnclonedSourceDir(dest);\n  if (isSourceCloned(dest)) {\n    if (!opts.force) return false;\n    backup = `${dest}.bak`;\n    rmSync(backup, { recursive: true, force: true });\n    renameSync(dest, backup);\n  }\n  mkdirSync(path.dirname(dest), { recursive: true });\n  const args = [\"clone\", entry.url, dest];\n  // `pin` may be a branch/tag; pass it as the clone branch when present.\n  if (entry.pin) args.splice(1, 0, \"--branch\", entry.pin);\n  const clone = spawnSync(\"git\", args, { stdio: \"inherit\" });\n  if (clone.status !== 0) {\n    if (backup) {\n      rmSync(dest, { recursive: true, force: true });\n      renameSync(backup, dest);\n    } else {\n      // Nothing was there before: leave no empty `<host>/<owner>/` directories behind.\n      rmSync(dest, { recursive: true, force: true });\n      pruneEmptyCloneParents(dest);\n    }\n    logErr(`git clone failed for ${entry.url}`);\n    process.exit(1);\n  }\n  if (backup) rmSync(backup, { recursive: true, force: true });\n  return true;\n}\n\n/**\n * Advance an existing clone with `git pull --ff-only`. `add` and\n * `install --locked` leave the shared clone on a detached HEAD at the locked\n * commit, where `git pull` refuses to run, so a detached clone is put back on\n * its branch first (the pin when it is a branch, else the remote's default).\n * An entry pinned to a tag or SHA has nothing to pull and counts as synced.\n * On failure `error` is one line: git's whole stderr minus `hint:` advice and fetch progress.\n */\nexport function pullSourceClone(\n  dest: string,\n  entry: SourceEntry,\n): { ok: true } | { ok: false; error: string } {\n  if (!attachToBranch(dest, entry.pin) && entry.pin) return { ok: true };\n  const pull = spawnSync(\"git\", [\"pull\", \"--ff-only\"], {\n    cwd: dest,\n    stdio: \"pipe\",\n    encoding: \"utf8\",\n  });\n  if (pull.status === 0) return { ok: true };\n  const reason = pullFailureReason(pull.stderr) || `git exited with status ${pull.status}`;\n  return { ok: false, error: `git pull failed: ${reason}` };\n}\n\n/**\n * Library name for a new source row: the repo short name, or `<owner>-<repo>`\n * (then `<host>-<owner>-<repo>`) when another library already holds that name.\n * Rows are found by clone path, never by this name: `orgA/repo` and\n * `orgB/repo` share the short name `repo`.\n */\nfunction sourceLibraryName(url: string, libs: readonly { name: string }[]): string {\n  const taken = new Set(libs.map((l) => l.name));\n  // A repo may be named `my.repo`; `addLibrary` only accepts `[A-Za-z0-9_-]`\n  // starting with a letter or digit, so every candidate is slugged first.\n  const flat = (s: string) => s.replace(/[^A-Za-z0-9_-]+/g, \"-\").replace(/^[-_]+/, \"\") || \"source\";\n  const short = flat(sourceShortName(url));\n  if (!taken.has(short)) return short;\n  const parts = sourceCacheKey(url).split(\"/\");\n  const candidates =\n    parts.length === 3\n      ? [flat(`${parts[1]}-${parts[2]}`), flat(`${parts[0]}-${parts[1]}-${parts[2]}`)]\n      : [];\n  for (const c of candidates) if (!taken.has(c)) return c;\n  let n = 2;\n  while (taken.has(`${short}-${n}`)) n++;\n  return `${short}-${n}`;\n}\n\n/**\n * Why a freshly cloned source has no publisher to give its assets, or `undefined`. A GitHub URL\n * derives it from the org and `--publisher` records it, so only another URL is walked: the walk\n * is the one `add`, `install` and `check` run, so what it refuses here they would skip later.\n */\nasync function publisherProblem(entry: SourceEntry, dest: string): Promise<string | undefined> {\n  if (entry.publisher || /github\\.com[/:]/.test(entry.url)) return undefined;\n  let problem: string | undefined;\n  await buildProvenanceIndex(\n    [\n      {\n        localPath: dest,\n        sourceUrl: entry.url,\n        commit: getRepoCommit(dest) ?? \"0\".repeat(40),\n        tag: entry.pin,\n        overlayManifestPath: curatedManifestOverlay(entry.url),\n      },\n    ],\n    {\n      knownKinds: getKnownKinds(),\n      onSourceError: (_clone, err) => {\n        const why = err instanceof Error ? err.message : String(err);\n        if (/publisher must be declared/.test(why)) problem = why;\n      },\n    },\n  );\n  return problem;\n}\n\n/**\n * Refresh the machine-global manifest cache for `entry` by running discovery\n * and upserting AssetDefinitions into `<skaile home>/index.db`. Creates the\n * libraries-table cache row if missing (ownership: reader = cache state).\n */\nasync function refreshManifestCache(\n  entry: SourceEntry,\n  includeDev = false,\n): Promise<{\n  assetsFound: number;\n  assetsUpdated: number;\n  errors: string[];\n  advisories: string[];\n}> {\n  const { manager, library, close } = await openLibraryManager();\n  try {\n    const dest = sourceClonePath(sourceCacheKey(entry.url));\n    const libs = await manager.listLibraries();\n    const existing = libs.find((l) => path.resolve(l.path) === path.resolve(dest));\n    // A clone made under an older cache key (the bare last segment before the url hash; `.git`\n    // kept for a `….git/` url) leaves its library row at the old path. The row is this source's:\n    // point it at the new clone instead of adding a second row for the same source (`add` would\n    // warn \"exists in 2 libraries\"). Found by the old clone path or by the url it records.\n    const key = sourceCacheKey(entry.url);\n    const priorDirs = priorSourceCacheKeys(entry.url).map((k) => path.resolve(sourceClonePath(k)));\n    const legacyRow = existing\n      ? undefined\n      : libs.find(\n          (l) =>\n            l.ownership === \"reader\" &&\n            (priorDirs.includes(path.resolve(l.path)) ||\n              (\"url\" in l.backendConfig && sourceCacheKey(l.backendConfig.url) === key)),\n        );\n    if (legacyRow) {\n      const legacyDir = path.resolve(legacyRow.path);\n      await manager.updateLibrary(legacyRow.id, { path: dest });\n      logInfo(\n        `Moved the \"${legacyRow.name}\" library to the new clone ${dest}. ` +\n          `The old clone ${legacyDir} is no longer used and can be deleted.`,\n      );\n    }\n    const added =\n      existing ??\n      legacyRow ??\n      (await manager.addLibrary({\n        name: sourceLibraryName(entry.url, libs),\n        path: dest,\n        backend: \"git\",\n        backendConfig: {\n          url: entry.url,\n          branch: entry.pin ?? \"main\",\n          authHint: \"ssh\",\n          ...(entry.publisher ? { publisher: entry.publisher } : {}),\n        },\n        ownership: \"reader\",\n      }));\n    // The library row and its indexed assets are shared by every project that declares the\n    // source, so they keep the publisher the first indexer recorded. A project that declares\n    // another `--publisher` sees its own one: `AssetManager.scopeLibraryIndex` re-labels the\n    // assets for it and leaves what other projects see alone (p1822).\n    const cfg = added.backendConfig;\n    const recorded = \"url\" in cfg ? cfg.publisher : undefined;\n    const publisher = existing || legacyRow ? recorded : entry.publisher;\n    const lib = added;\n    // A `skaile source manifest init` curated manifest overrides the upstream repo's\n    // raw glob discovery; `asset install` rescans with the same overlay.\n    const catalog = new LocalCatalogSource(library, lib.id, dest, getKindRegistry(), {\n      sidecarManifestFile: curatedManifestOverlay(entry.url),\n      publisher,\n    });\n    const result = await catalog.sync({ includeDev });\n    await library.syncSource(lib.id);\n    return result;\n  } finally {\n    close();\n  }\n}\n\n/**\n * Re-register the reader library of every source this project declares whose clone is cached\n * but whose library row is gone. The row is machine-wide: `source remove` in another project\n * drops it while this project's `sources:` still names the source, and `search` then finds\n * nothing until `update` runs (p757). Never touches the network; returns the sources restored.\n */\nexport async function restoreSourceReaders(projectDir: string): Promise<string[]> {\n  const root = projectRootOf(projectDir);\n  if (!root) return [];\n  const sources = readProjectSources(path.join(root, workspaceConfigFilename()));\n  const cached = sources.filter((s) => isSourceCloned(sourceClonePath(sourceCacheKey(s.url))));\n  if (cached.length === 0) return [];\n  const { manager, close } = await openLibraryManager();\n  let missing: SourceEntry[];\n  try {\n    const libs = await manager.listLibraries();\n    missing = cached.filter(\n      (s) =>\n        !libs.some(\n          (l) => path.resolve(l.path) === path.resolve(sourceClonePath(sourceCacheKey(s.url))),\n        ),\n    );\n  } finally {\n    close();\n  }\n  const restored: string[] = [];\n  for (const entry of missing) {\n    try {\n      await refreshManifestCache(entry);\n      restored.push(sourceLabel(entry, sources));\n    } catch (err) {\n      logWarn(\n        `Could not re-register source \"${sourceLabel(entry, sources)}\": ${err instanceof Error ? err.message : String(err)}`,\n      );\n    }\n  }\n  return restored;\n}\n\n/**\n * Auto-sync hook for `skaile search` on an unsynced workspace. Clones/pulls and\n * re-indexes every source declared in the project's `skaile.yaml`, then returns\n * whether the manifest cache may have changed (caller re-queries on `true`).\n *\n * Unlike `source sync`, this degrades gracefully — a clone/pull/index failure is\n * logged and skipped (never `process.exit`) so a failed auto-sync falls back to\n * the \"run sync first\" hint rather than killing the search. Returns `false`\n * (silently, no announce) when no sources are declared. Callers must guard\n * air-gapped mode themselves — this always touches the network.\n */\nexport async function autoSyncForSearch(projectDir: string): Promise<boolean> {\n  const root = projectRootOf(projectDir);\n  if (!root) return false;\n  if (readProjectSources(path.join(root, workspaceConfigFilename())).length === 0) return false;\n\n  logInfo(\"sources not synced — syncing now…\");\n  const { synced } = await syncProjectSources(projectDir);\n  return synced > 0;\n}\n\n/**\n * Clone-or-pull every source declared in the project's `skaile.yaml`, then\n * refresh its manifest cache. Shared by `autoSyncForSearch` and `skaile update`\n * (the latter offers it behind a confirm) so a re-deploy can see upstream\n * commits — `update` re-deploys against the local source cache, which is\n * otherwise frozen at the commit captured when the source was first cloned.\n *\n * Graceful by design: a clone/pull/index failure for one source is logged and\n * skipped (never `process.exit`), so a single bad remote can't abort the run.\n * Existing clones are advanced with `git pull --ff-only` (no `--depth=1`, unlike\n * the installer's `pullRepo`, so it fast-forwards instead of tripping the\n * shallow-divergence path). Returns a count summary for the caller to report.\n */\nexport async function syncProjectSources(\n  projectDir: string,\n  opts: { dev?: boolean } = {},\n): Promise<{ total: number; synced: number; failed: number }> {\n  const root = path.resolve(projectDir);\n  const sources = readProjectSources(path.join(root, workspaceConfigFilename()));\n  let synced = 0;\n  let failed = 0;\n  for (const entry of sources) {\n    const slug = sourceShortName(entry.url);\n    const dest = sourceClonePath(sourceCacheKey(entry.url));\n    try {\n      // Quiet git — the sync is a preparatory step; keep progress bars out of\n      // the foreground output (spinner / install result).\n      if (!isSourceCloned(dest)) {\n        discardUnclonedSourceDir(dest);\n        mkdirSync(path.dirname(dest), { recursive: true });\n        const args = [\"clone\", entry.url, dest];\n        if (entry.pin) args.splice(1, 0, \"--branch\", entry.pin);\n        const clone = spawnSync(\"git\", args, { stdio: \"ignore\" });\n        if (clone.status !== 0) {\n          discardUnclonedSourceDir(dest);\n          logWarn(`${slug}: git clone failed, skipping.`);\n          failed++;\n          continue;\n        }\n      } else {\n        const pull = pullSourceClone(dest, entry);\n        if (!pull.ok) {\n          logErr(`${slug}: ${pull.error}`);\n          failed++;\n          continue;\n        }\n      }\n      const result = await refreshManifestCache(entry, opts.dev);\n      for (const err of result.errors) logWarn(`${slug}: ${err}`);\n      logAdvisories(result.advisories, false, slug);\n      synced++;\n    } catch (err) {\n      logWarn(`${slug}: sync failed — ${err instanceof Error ? err.message : String(err)}`);\n      failed++;\n    }\n  }\n  return { total: sources.length, synced, failed };\n}\n\n/**\n * Short names of the project's source clones that hold commits their upstream lacks.\n * `update --no-sync` still re-deploys from such a clone, so it reports them the way\n * `source sync` does. A clone without an upstream (detached at a pin) never counts.\n */\nexport function divergedSourceClones(projectDir: string): string[] {\n  const root = path.resolve(projectDir);\n  const diverged: string[] = [];\n  for (const entry of readProjectSources(path.join(root, workspaceConfigFilename()))) {\n    const dest = sourceClonePath(sourceCacheKey(entry.url));\n    if (!existsSync(dest)) continue;\n    const ahead = spawnSync(\"git\", [\"-C\", dest, \"rev-list\", \"--count\", \"@{upstream}..HEAD\"], {\n      stdio: \"pipe\",\n      encoding: \"utf8\",\n    });\n    if (ahead.status === 0 && Number(ahead.stdout.trim()) > 0) {\n      diverged.push(sourceShortName(entry.url));\n    }\n  }\n  return diverged;\n}\n\n/** Remove the libraries-table cache row and (optionally) the clone bytes. */\nasync function dropManifestCache(url: string, purgeClone: boolean): Promise<void> {\n  const dest = sourceClonePath(sourceCacheKey(url));\n  const { manager, close } = await openLibraryManager();\n  try {\n    // By clone path, not short name: another org's repo of the same name keeps its row.\n    const dirs = [dest, ...priorSourceCacheKeys(url).map((k) => sourceClonePath(k))].map((d) =>\n      path.resolve(d),\n    );\n    const existing = (await manager.listLibraries()).find((l) =>\n      dirs.includes(path.resolve(l.path)),\n    );\n    if (existing) {\n      await manager.removeLibrary(existing.name, { purge: false });\n    }\n  } finally {\n    close();\n  }\n  if (purgeClone) {\n    const dest = sourceClonePath(sourceCacheKey(url));\n    if (existsSync(dest)) rmSync(dest, { recursive: true, force: true });\n  }\n}\n\n/**\n * The refusal for a `source add` argument that names a directory on this machine which cannot be\n * cloned: a registered library (it is already searchable and needs no source) or a folder that\n * is not a git repository. `undefined` for a URL, a shorthand or a directory that is a git repo.\n */\nexport async function localPathNotASource(source: string): Promise<string | undefined> {\n  const raw = source.trim().replace(/^file:\\/\\//, \"\");\n  // The path rule of `normalizeSourceUrl`: a bare name is a shorthand, never a folder in the cwd.\n  if (!/^(?:\\/|\\.{1,2}(?:\\/|$)|~\\/)/.test(raw)) return undefined;\n  const dir = path.resolve(raw.startsWith(\"~/\") ? path.join(os.homedir(), raw.slice(2)) : raw);\n  if (!existsSync(dir) || !statSync(dir).isDirectory()) return undefined;\n  const real = realpathSync(dir);\n  const { manager, close } = await openLibraryManager();\n  try {\n    const lib = (await manager.listLibraries()).find((l) => {\n      try {\n        return realpathSync(l.path) === real;\n      } catch {\n        return path.resolve(l.path) === dir;\n      }\n    });\n    if (lib) {\n      return `${dir} is the library \"${lib.name}\"; it needs no source — \\`skaile library list\\` shows it and its assets are already searchable.`;\n    }\n  } finally {\n    close();\n  }\n  const git = spawnSync(\"git\", [\"-C\", dir, \"rev-parse\", \"--git-dir\"], { encoding: \"utf8\" });\n  if (git.status !== 0) {\n    return `${dir} is not a git repository. A source is a git repo: run \\`git init\\` and commit there, or register the folder as a library with \\`skaile library init <name> --path ${dir}\\`.`;\n  }\n  return undefined;\n}\n\n/**\n * The refusal for a `source add` URL that is the remote of a library registered by hand\n * (`library init --git`, `library init --reader`): its assets are already searchable, and a\n * source of the same repository would register a second, read-only library of the same\n * content (p499). `undefined` for any other URL. The reader row of a source clone never counts:\n * it lives in the clone cache and is the source itself.\n */\nexport async function remoteOfRegisteredLibrary(url: string): Promise<string | undefined> {\n  const key = sourceCacheKey(url);\n  const cloneRoots = [getGlobalCacheDir(), path.join(globalSkaileDir(), \"sources\")].map((d) =>\n    path.resolve(d),\n  );\n  const { manager, close } = await openLibraryManager();\n  try {\n    const lib = (await manager.listLibraries()).find((l) => {\n      const remote = \"url\" in l.backendConfig ? l.backendConfig.url : undefined;\n      if (typeof remote !== \"string\" || sourceCacheKey(remote) !== key) return false;\n      const at = path.resolve(l.path);\n      return !cloneRoots.some((root) => at.startsWith(root + path.sep));\n    });\n    return lib\n      ? `${url} is the remote of the library \"${lib.name}\"; it needs no source — \\`skaile library list\\` shows it and its assets are already searchable.`\n      : undefined;\n  } finally {\n    close();\n  }\n}\n\nexport function makeSourceCommand(): Command {\n  const cmd = new Command(\"source\").description(\n    \"Manage github sources for the current project (recorded in skaile.yaml)\",\n  );\n\n  // ── source add ──────────────────────────────────────────────────────────\n  cmd\n    .command(\"add <source>\")\n    .description(\n      \"Clone a github repo and register it in this project's skaile.yaml. \" +\n        \"<source> is a full git URL or an owner/repo shorthand (→ git@github.com:<owner>/<repo>.git).\",\n    )\n    .option(\"--name <slug>\", \"[deprecated] no-op — the source entry stores only the URL\")\n    .option(\"--pin <ref>\", \"Pin a branch, tag, or 40-char SHA\")\n    .option(\"--branch <branch>\", \"[deprecated] alias for --pin\")\n    .option(\n      \"--force\",\n      \"Remove an existing clone and re-clone; also change the publisher of a registered URL\",\n      false,\n    )\n    .option(\n      \"--publisher <name>\",\n      \"Publisher of the source's assets when its skaile.manifest.yaml declares none (required for a non-GitHub URL)\",\n    )\n    .option(\"--dev\", \"Also index dev-only assets under the source's dev_paths\", false)\n    .option(\"--verbose\", \"List every referenced file outside the asset filter\", false)\n    .option(\"--project-dir <path>\", \"Project directory\", process.cwd())\n    .action(\n      async (\n        source: string,\n        opts: {\n          name?: string;\n          pin?: string;\n          branch?: string;\n          force?: boolean;\n          publisher?: string;\n          dev?: boolean;\n          verbose?: boolean;\n          projectDir: string;\n        },\n      ) => {\n        // A bare name used to expand to the `skaile-ai` org over SSH: a typo (or the slug\n        // `source manifest init` printed) cloned a made-up repo. Say what to give instead.\n        if (/^[\\w.-]+$/.test(source.trim().replace(/\\.git$/, \"\"))) {\n          logErr(\n            `\"${source}\" is not a git URL or an owner/repo shorthand. ` +\n              \"Use `skaile source add <owner>/<repo>` or the full URL \" +\n              \"(for a curated manifest: `skaile source add <the repo URL>`).\",\n          );\n          process.exitCode = 1;\n          return;\n        }\n        const notASource = await localPathNotASource(source);\n        if (notASource) {\n          logErr(notASource);\n          process.exitCode = 1;\n          return;\n        }\n        let url = normalizeSourceUrl(source);\n        const ownLibrary = await remoteOfRegisteredLibrary(url);\n        if (ownLibrary) {\n          logErr(ownLibrary);\n          process.exitCode = 1;\n          return;\n        }\n        const yamlPath = requireProjectYamlPath(opts.projectDir);\n\n        // A different URL string that maps to the same cache key (e.g. the\n        // `.git`-suffixed or scp form of an already-registered remote) would\n        // fight over one clone dir. setSource only dedupes exact strings, so\n        // reject the ambiguous collision here instead of silently shadowing.\n        // The one exception is a repository on this machine: `/x/r.git` and `file:///x/r.git`\n        // are one source, and the registered spelling stays (p618).\n        const collision = findCacheKeyCollision(readProjectSources(yamlPath), url);\n        if (collision && isLocalSourceUrl(collision.url) && isLocalSourceUrl(url)) {\n          url = collision.url;\n        } else if (collision) {\n          logErr(\n            `\"${url}\" maps to the same cache key (${sourceCacheKey(url)}) as ` +\n              `already-registered \"${collision.url}\". Remove that source first ` +\n              `(skaile source remove) or re-use its exact URL to update it.`,\n          );\n          process.exitCode = 1;\n          return;\n        }\n\n        if (opts.name) {\n          logWarn(\n            \"the --name flag is deprecated; the source entry now stores only the URL \" +\n              \"(the cache slug is derived from it).\",\n          );\n        }\n        const pin = opts.pin ?? opts.branch;\n        const slug = sourceShortName(url);\n        const entry: SourceEntry = { url };\n        if (pin) entry.pin = pin;\n        if (opts.publisher) entry.publisher = requireValidPublisherOrExit(opts.publisher);\n\n        // The publisher of a registered URL names every ref its assets carry: a different one\n        // would re-key the source and break the refs declared under the old one (p722).\n        const registered = readProjectSources(yamlPath).find((s) => s.url === url);\n        // A source registered without `--publisher` has one too: the manifest's, else the GitHub\n        // org of its URL. Compare what each choice resolves to in the clone, not the flag (p722).\n        // The clone's `origin` may have been repointed (a mirror, `git remote set-url`), so the\n        // org is read from the registered URL when the clone gives none: the guard compares\n        // against the registered entry, never against whatever the clone says today.\n        const clonedAt = sourceClonePath(sourceCacheKey(url));\n        const urlOrg = registered\n          ? /github\\.com[/:]([^/]+)\\/[^/]+/.exec(registered.url)?.[1]?.toLowerCase()\n          : undefined;\n        const publisherNow =\n          registered && existsSync(clonedAt)\n            ? resolveSourcePublisher(clonedAt, registered.publisher ?? urlOrg)\n            : (registered?.publisher ?? urlOrg);\n        const publisherThen =\n          registered && entry.publisher !== undefined && existsSync(clonedAt)\n            ? resolveSourcePublisher(clonedAt, entry.publisher)\n            : entry.publisher;\n        if (\n          registered &&\n          publisherNow !== undefined &&\n          entry.publisher !== undefined &&\n          publisherNow !== publisherThen &&\n          !opts.force\n        ) {\n          let declared: string[] = [];\n          try {\n            declared = (resolveSkWorkspaceConfig(path.dirname(yamlPath)).dependencies ?? []).filter(\n              (d) => d.includes(`@${publisherNow}/`),\n            );\n          } catch {\n            // an unreadable skaile.yaml stops later; the refusal below still holds\n          }\n          logErr(\n            `${url} is registered with publisher \"${publisherNow}\"${\n              registered.publisher === undefined ? \" (from its manifest or GitHub org)\" : \"\"\n            }; --publisher ` +\n              `\"${entry.publisher}\" would change it${\n                declared.length > 0 ? ` and break the declared ${declared.join(\", \")}` : \"\"\n              }. Pass --force to change it, or skaile source remove it first.`,\n          );\n          process.exitCode = 1;\n          return;\n        }\n\n        const dest = sourceClonePath(sourceCacheKey(url));\n        const preexisting = isSourceCloned(dest);\n        // Clone/validate the repo BEFORE touching skaile.yaml — a failed clone\n        // (repo not found, bad URL, network error) hard-exits in ensureClone, so\n        // the entry is only ever recorded once the source is known-good.\n        const cloned = ensureClone(entry, { force: opts.force });\n        // A source with no publisher to give is skipped by every later command, so refuse it\n        // here, before anything is recorded or indexed (a clone made by this call goes too).\n        const noPublisher = await publisherProblem(entry, dest);\n        if (noPublisher) {\n          if (cloned && !preexisting) {\n            rmSync(dest, { recursive: true, force: true });\n            pruneEmptyCloneParents(dest);\n          }\n          logErr(noPublisher);\n          process.exitCode = 1;\n          return;\n        }\n        if (!cloned) {\n          logOk(`Reusing cached clone at ${dest}`);\n        } else if (preexisting) {\n          logOk(`Re-cloned ${url} → ${dest}`);\n        } else {\n          logOk(`Cloned ${url} → ${dest}`);\n        }\n\n        const editor = loadProjectEditor(yamlPath);\n        editor.setSource(entry);\n        editor.save();\n\n        const result = await refreshManifestCache(entry, opts.dev);\n        const failed = indexingHadFailures(result);\n        const indexedMsg = `Indexed ${result.assetsUpdated} of ${result.assetsFound} asset(s) from \"${slug}\".`;\n        if (failed) {\n          logWarn(indexedMsg);\n        } else {\n          logOk(indexedMsg);\n        }\n        for (const err of result.errors) logWarn(err);\n        logAdvisories(result.advisories, opts.verbose === true);\n\n        const legacyHint = legacySourceConfigHint(dest);\n        if (legacyHint) logWarn(legacyHint);\n\n        const where = path.relative(process.cwd(), yamlPath);\n        if (failed) {\n          // The entry IS recorded in skaile.yaml, but indexing did not fully\n          // succeed — don't present it as a clean success.\n          logWarn(\n            `Source \"${slug}\" registered in ${where}, but ${result.errors.length} ` +\n              `asset(s) failed to index (see above). Fix the cause, then re-run ` +\n              `\\`skaile source sync ${slug}\\`.`,\n          );\n          process.exitCode = 1;\n        } else {\n          logOk(`Source \"${slug}\" registered in ${where}.`);\n        }\n      },\n    );\n\n  // ── source list ─────────────────────────────────────────────────────────\n  cmd\n    .command(\"list\")\n    .description(\"List sources registered in this project's skaile.yaml\")\n    .option(\"--json\", \"Output as JSON\")\n    .option(\"--project-dir <path>\", \"Project directory\", process.cwd())\n    .action(async (opts: { json?: boolean; projectDir: string }) => {\n      const yamlPath = requireProjectYamlPath(opts.projectDir);\n      const sources = readProjectSources(yamlPath);\n      if (opts.json) return console.log(JSON.stringify(sources, null, 2));\n      if (sources.length === 0) {\n        logInfo(\"No sources in skaile.yaml. Run `skaile source add <git-url>` to register one.\");\n        return;\n      }\n      console.log();\n      console.log(S.heading(\"  Sources\"));\n      for (const s of sources) {\n        const slug = sourceLabel(s, sources);\n        const cached = isSourceCloned(sourceClonePath(sourceCacheKey(s.url)))\n          ? \"\"\n          : S.warn(\" (not cached)\");\n        console.log(`  ${S.cmd(slug.padEnd(24))}  ${S.dim(s.url)}${cached}`);\n      }\n      console.log(`\\n  ${S.dim(`${sources.length} source(s)`)}\\n`);\n    });\n\n  // ── source show ─────────────────────────────────────────────────────────\n  cmd\n    .command(\"show <name-or-url>\")\n    .description(\"Show details for a source (matched by URL or derived slug)\")\n    .option(\"--project-dir <path>\", \"Project directory\", process.cwd())\n    .action(async (key: string, opts: { projectDir: string }) => {\n      const yamlPath = requireProjectYamlPath(opts.projectDir);\n      const all = readProjectSources(yamlPath);\n      const resolved = resolveSource(all, key);\n      if (resolved.kind === \"none\") {\n        logErr(`No source matching \"${key}\" in ${yamlPath}.`);\n        process.exit(1);\n      }\n      if (resolved.kind === \"ambiguous\") exitAmbiguousSource(key, resolved.entries);\n      const entry = resolved.entry;\n      const slug = sourceLabel(entry, all);\n      const clonePath = sourceClonePath(sourceCacheKey(entry.url));\n      console.log(\n        JSON.stringify(\n          {\n            ...entry,\n            slug,\n            clonePath,\n            cached: isSourceCloned(clonePath),\n          },\n          null,\n          2,\n        ),\n      );\n    });\n\n  // ── source remove ───────────────────────────────────────────────────────\n  cmd\n    .command(\"remove <name-or-url>\")\n    .description(\"Remove a source from this project's skaile.yaml (matched by URL or slug)\")\n    .option(\n      \"--purge\",\n      `Also delete the cached clone from ${path.join(globalCacheRoot(), \"sources\")}${path.sep}`,\n      false,\n    )\n    .option(\"--force\", \"Remove the source although a locked asset still comes from it\", false)\n    .option(\"--project-dir <path>\", \"Project directory\", process.cwd())\n    .action(async (key: string, opts: { purge: boolean; force?: boolean; projectDir: string }) => {\n      const yamlPath = requireProjectYamlPath(opts.projectDir);\n      const editor = loadProjectEditor(yamlPath);\n      // Resolve to the stored URL (entries are keyed by url in the editor).\n      const all = editor.getSources();\n      const resolved = resolveSource(all, key);\n      if (resolved.kind === \"none\") {\n        logErr(`No source matching \"${key}\" in ${yamlPath}.`);\n        process.exit(1);\n      }\n      if (resolved.kind === \"ambiguous\") exitAmbiguousSource(key, resolved.entries);\n      const match = resolved.entry;\n      const slug = sourceLabel(match, all);\n      // A locked asset that comes from this source could not be restored or updated once the\n      // source is gone: check, doctor and outdated would report it, install --locked would fail.\n      const locked = new AssetManager({\n        registry: getKindRegistry(),\n        projectDir: path.dirname(yamlPath),\n      }).lockedFromSource(match.url);\n      if (locked.length > 0 && !opts.force) {\n        logErr(\n          `Source \"${slug}\" still supplies ${locked.length} locked asset(s): ${locked.join(\", \")}. ` +\n            `Run \\`skaile remove\\` on them first, or pass --force to remove the source anyway.`,\n        );\n        process.exit(1);\n      }\n      editor.removeSource(match.url);\n      editor.save();\n      await dropManifestCache(match.url, opts.purge);\n      logOk(\n        opts.purge\n          ? `Removed source \"${slug}\" and purged its clone.`\n          : `Removed source \"${slug}\" from skaile.yaml (clone left in ${path.join(globalCacheRoot(), \"sources\")} — pass --purge to remove it, or run \\`skaile cache clean --global\\`).`,\n      );\n    });\n\n  // ── source sync ─────────────────────────────────────────────────────────\n  cmd\n    .command(\"sync [name]\")\n    .description(\"Pull upstream changes and refresh the manifest cache\")\n    .option(\"--dev\", \"Also index dev-only assets under each source's dev_paths\", false)\n    .option(\"--verbose\", \"List every referenced file outside the asset filter\", false)\n    .option(\"--all\", \"Sync every source without prompting\", false)\n    .option(\"--project-dir <path>\", \"Project directory\", process.cwd())\n    .action(\n      async (\n        key: string | undefined,\n        opts: { dev?: boolean; all?: boolean; verbose?: boolean; projectDir: string },\n      ) => {\n        const yamlPath = requireProjectYamlPath(opts.projectDir);\n        const sources = readProjectSources(yamlPath);\n        if (sources.length === 0) {\n          logInfo(\"No sources in skaile.yaml.\");\n          return;\n        }\n\n        let targets: SourceEntry[];\n        if (key) {\n          const resolved = resolveSource(sources, key);\n          if (resolved.kind === \"ambiguous\") exitAmbiguousSource(key, resolved.entries);\n          if (resolved.kind === \"none\") {\n            logInfo(`No source matching \"${key}\".`);\n            return;\n          }\n          targets = [resolved.entry];\n        } else if (opts.all || sources.length === 1 || !process.stdin.isTTY) {\n          // --all, a single source, or a non-interactive shell: sync everything.\n          targets = sources;\n        } else {\n          const selected = await p.multiselect({\n            message: \"Select sources to sync\",\n            options: sources.map((s) => ({\n              value: s.url,\n              label: sourceShortName(s.url),\n              hint: s.url,\n            })),\n            required: true,\n          });\n          if (p.isCancel(selected)) {\n            p.cancel(\"Cancelled.\");\n            return;\n          }\n          const picked = new Set(selected as string[]);\n          targets = sources.filter((s) => picked.has(s.url));\n        }\n        for (const entry of targets) {\n          const slug = sourceLabel(entry, sources);\n          const dest = sourceClonePath(sourceCacheKey(entry.url));\n          if (!isSourceCloned(dest)) {\n            ensureClone(entry);\n            logOk(`${slug}: cloned to ${dest}.`);\n          } else {\n            const pull = pullSourceClone(dest, entry);\n            if (!pull.ok) {\n              logErr(`${slug}: ${pull.error}`);\n              process.exitCode = 1;\n              continue;\n            }\n          }\n          const result = await refreshManifestCache(entry, opts.dev);\n          const failed = indexingHadFailures(result);\n          const indexedMsg = `${slug}: indexed ${result.assetsUpdated} of ${result.assetsFound} asset(s).`;\n          if (failed) {\n            logWarn(indexedMsg);\n            process.exitCode = 1;\n          } else {\n            logOk(indexedMsg);\n          }\n          for (const err of result.errors) logWarn(`${slug}: ${err}`);\n          logAdvisories(result.advisories, opts.verbose === true, slug);\n          const legacyHint = legacySourceConfigHint(dest);\n          if (legacyHint) logWarn(`${slug}: ${legacyHint}`);\n        }\n      },\n    );\n\n  // ── source patch / propose (stubs) ──────────────────────────────────────\n  cmd\n    .command(\"patch <ref>\")\n    .description(\"Extract an asset for editing against the source\")\n    .action((_ref: string) => {\n      logErr(\n        \"`skaile source patch` is scaffolded but not yet wired. \" +\n          \"The patch flow lands in a follow-up PR.\",\n      );\n      process.exit(2);\n    });\n\n  cmd\n    .command(\"propose <ref>\")\n    .description(\"Open a PR with the patch against the source upstream\")\n    .action((_ref: string) => {\n      logErr(\n        \"`skaile source propose` is scaffolded but not yet wired. \" +\n          \"The propose flow lands in a follow-up PR.\",\n      );\n      process.exit(2);\n    });\n\n  // ── source manifest * ───────────────────────────────────────────────────\n  addSourceManifestCommands(cmd);\n\n  return cmd;\n}\n"]}

package/dist/chunk-EN5REMWV.js.map

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* The tool-approval card a harness raises for `permissionMode: \"interactive\"`: a `message_start`\n * carrying an `AskUserQuestion` tool call whose input has an `approval` description. The\n * normalizer turns it into a `question` event with `approval`; a host that reads the harness's\n * events directly (the REPL, a single-shot run) recognises it with {@link approvalCardOf} and\n * answers with {@link APPROVE_ONCE} or {@link DENY} through `harness.answerQuestion`.\n */\nimport type { AgentEvent } from \"./types.js\";\n\n/** The one positive answer of an approval card. */\nexport const APPROVE_ONCE = \"Approve once\";\n/** The negative answer of an approval card. */\nexport const DENY = \"Deny\";\n\n/** What a host needs to ask and answer one approval card. */\nexport interface ApprovalCard {\n  /** The question text; the key `answerQuestion` takes. */\n  question: string;\n  requestId?: string;\n  kind: \"command\" | \"file\" | \"permissions\" | \"mcp\";\n  /** Bounded plain text of what the tool call is about to do. */\n  details: string[];\n}\n\n/** The approval card an event carries, else `undefined`. */\nexport function approvalCardOf(event: AgentEvent): ApprovalCard | undefined {\n  if (event.type !== \"message_start\" || !Array.isArray(event.message.content)) return undefined;\n  for (const block of event.message.content) {\n    if (block.type !== \"tool_use\" || block.name !== \"AskUserQuestion\") continue;\n    const input = block.input as Record<string, unknown> | undefined;\n    const approval = input?.approval as { kind?: unknown; details?: unknown } | undefined;\n    const questions = input?.questions;\n    const first = Array.isArray(questions) ? (questions[0] as { question?: unknown }) : undefined;\n    if (\n      !approval ||\n      typeof first?.question !== \"string\" ||\n      !Array.isArray(approval.details) ||\n      !approval.details.every((d) => typeof d === \"string\")\n    ) {\n      continue;\n    }\n    return {\n      question: first.question,\n      ...(typeof input?.requestId === \"string\" ? { requestId: input.requestId } : {}),\n      kind: approval.kind as ApprovalCard[\"kind\"],\n      details: approval.details as string[],\n    };\n  }\n  return undefined;\n}\n","/**\n * AI endpoint transport for the `claude-sdk` harness — the Claude Agent SDK's\n * child-process environment.\n *\n * {@link buildClaudeEndpointEnv} takes an **AI provider registry entry** and\n * is what the harness calls, on every transport. It is plan §2.3's\n * `buildEndpointEnv` for the claude-sdk row (named for the harness because the\n * vars it emits — `CLAUDE_CODE_USE_*`, `ANTHROPIC_*` — are the Claude Agent\n * SDK's own contract, not a portable one).\n *\n * A registry entry says what the deleted `cloud` axis said — Amazon Bedrock,\n * Google Vertex AI, Azure AI Foundry, a generic gateway — with `surface` +\n * `transport` + `base_url` + `credential`, and says it for the direct\n * endpoint too, which the `cloud` axis could not address at all.\n *\n * Cross-repo contract: env key names and semantics here are load-bearing —\n * the platform resolves credential bundles against the same key set.\n */\n\nimport {\n  type AIProviderEntry,\n  type AIProviderLlmEntry,\n  entryTransport,\n  normalizeAnthropicBaseUrl,\n  resolveEntryBaseUrl,\n} from \"@skaile/workspaces/core/provider-registry\";\n\n/**\n * Env vars scrubbed from the inherited environment before an endpoint env is\n * assembled. Ambient first-party credentials or a stale `CLAUDE_CODE_USE_*`\n * flag must never leak into a session whose entry points elsewhere (the\n * ambient carriers are restored explicitly when the entry has none of its\n * own).\n *\n * Deliberately NOT exhaustive: ambient transport-specific vars (AWS_*,\n * GOOGLE_*, ANTHROPIC_VERTEX_PROJECT_ID, ANTHROPIC_FOUNDRY_*) survive so a\n * standalone CLI inherits its own signing chain; the SDK ignores vars whose\n * transport flag is unset.\n */\nconst SCRUBBED_ENV_KEYS = [\"ANTHROPIC_API_KEY\", \"ANTHROPIC_AUTH_TOKEN\", \"ANTHROPIC_BASE_URL\"];\n\n/**\n * The Anthropic first-party endpoint. An entry that resolves to exactly this\n * host needs no `ANTHROPIC_BASE_URL`: the SDK already points there, and an\n * explicit value would make every default session look like a third-party\n * redirect to Claude Code's own telemetry and auth heuristics.\n */\nexport const ANTHROPIC_DEFAULT_BASE_URL = \"https://api.anthropic.com\";\n\n/**\n * Headers the SDK owns and an entry must not restate through\n * `ANTHROPIC_CUSTOM_HEADERS`: the protocol version it was built against, and\n * the two credential carriers (which are `credential.ref`'s job — a literal\n * secret in `headers` is a validation error anyway).\n */\nconst SDK_OWNED_HEADERS: Record<string, true> = {\n  \"anthropic-version\": true,\n  authorization: true,\n  \"x-api-key\": true,\n};\n\n/**\n * Which of the Claude Agent SDK's four native transports an entry addresses.\n *\n * The SDK has no `transport` field: it switches on a `CLAUDE_CODE_USE_*` flag.\n * Bedrock and Vertex are their own wire surfaces, so they are recognized by\n * `surface` as well as by `transport` — a legacy-derived entry that had no\n * region (and therefore no `params`, and therefore no `transport`) is still a\n * Bedrock session, exactly as it was before the registry existed.\n */\nexport type ClaudeEndpointMode = \"anthropic\" | \"bedrock\" | \"vertex\" | \"foundry\";\n\n/** Classify a registry entry into its {@link ClaudeEndpointMode}. */\nexport function claudeEndpointMode(entry: AIProviderEntry): ClaudeEndpointMode {\n  const surface = (entry as AIProviderLlmEntry).surface;\n  const transport = entryTransport(entry);\n  if (surface === \"bedrock-converse-stream\" || transport === \"bedrock\") return \"bedrock\";\n  if (surface === \"google-vertex\" || transport === \"vertex\") return \"vertex\";\n  if (transport === \"foundry\") return \"foundry\";\n  return \"anthropic\";\n}\n\n/** Arguments for {@link buildClaudeEndpointEnv}. */\nexport interface ClaudeEndpointEnvInput {\n  /** The selected registry entry — the whole endpoint definition. */\n  entry: AIProviderEntry;\n  /**\n   * The entry's credential, already resolved from its `credential.ref`\n   * (`resolveEntryCredential`). Absent for `kind: none`, for an ambient\n   * `sigv4` / `google_adc` / `azure_entra` chain, for `oauth` (whose blob the\n   * runner writes to the Claude credentials file, never to the env), and for a\n   * reference that did not resolve.\n   */\n  credential?: string;\n  /**\n   * The harness's base environment — `process.env` with `undefined` dropped.\n   * The endpoint vars are layered **on top** of it, never instead of it, so\n   * `PATH`, `HOME` and `SKAILE_SESSION_ID` reach the child.\n   */\n  baseEnv: Record<string, string>;\n  /** `AgentConfig.env` plus any credential material the session carried. */\n  configEnv?: Record<string, string>;\n}\n\n/**\n * Assemble the Claude Agent SDK child env for one registry entry (plan §2.3).\n *\n * Pure (no external state read, no input mutated). Starts from `baseEnv`\n * merged with `configEnv`, scrubs the inherited Anthropic credential/routing\n * vars and every `CLAUDE_CODE_USE_*` flag, then writes exactly what the entry\n * describes: at most one transport flag, the endpoint, and the credential in\n * the carrier its `kind` names.\n *\n * Credential kinds (§1.4): `api_key_header` → `ANTHROPIC_API_KEY` (the SDK\n * sends it as `x-api-key`); `bearer` → `ANTHROPIC_AUTH_TOKEN` (sent as\n * `Authorization: Bearer`); `sigv4` / `google_adc` / `azure_entra` emit\n * nothing and let the AWS/Google/Azure chain sign — which is why the scrub\n * deliberately spares ambient `AWS_*` / `GOOGLE_*` values; `oauth` and `none`\n * emit nothing, and the pre-scrub ambient carriers are restored so an OAuth or\n * shell-configured session keeps the auth it had.\n *\n * Never returns `undefined` or empty values; absent settings are omitted.\n */\nexport function buildClaudeEndpointEnv(args: ClaudeEndpointEnvInput): Record<string, string> {\n  const { entry, credential, baseEnv, configEnv } = args;\n  const env: Record<string, string> = { ...baseEnv, ...(configEnv ?? {}) };\n\n  // Captured before the scrub — an entry with no credential material of its\n  // own falls back to these, the way the gateway branch always has.\n  const ambient = { authToken: env.ANTHROPIC_AUTH_TOKEN, apiKey: env.ANTHROPIC_API_KEY };\n\n  for (const key of Object.keys(env)) {\n    if (SCRUBBED_ENV_KEYS.includes(key) || key.startsWith(\"CLAUDE_CODE_USE_\")) {\n      delete env[key];\n    }\n  }\n\n  const set = (key: string, value: string | undefined) => {\n    // Falsy check is deliberate: an empty-string credential/setting is never\n    // valid env — dropping it beats shipping a key the SDK treats as set.\n    if (value) env[key] = value;\n  };\n\n  const kind = entry.credential?.kind ?? \"none\";\n  const params = (entry as AIProviderLlmEntry).params as Record<string, string> | undefined;\n\n  // Static headers ride as ANTHROPIC_CUSTOM_HEADERS (`Name: Value` per line),\n  // the only channel the SDK offers. An entry with none leaves an ambient\n  // value alone.\n  const headers = Object.entries(entry.headers ?? {}).filter(\n    ([name]) => !SDK_OWNED_HEADERS[name.toLowerCase()],\n  );\n  if (headers.length > 0) {\n    env.ANTHROPIC_CUSTOM_HEADERS = headers.map(([name, value]) => `${name}: ${value}`).join(\"\\n\");\n  }\n\n  switch (claudeEndpointMode(entry)) {\n    case \"bedrock\": {\n      env.CLAUDE_CODE_USE_BEDROCK = \"1\";\n      // The AWS credential bundle itself is `configEnv` material (AWS_*), and\n      // ambient AWS_* survived the scrub, so a standalone CLI keeps its own.\n      set(\"AWS_REGION\", params?.region);\n      break;\n    }\n    case \"vertex\": {\n      env.CLAUDE_CODE_USE_VERTEX = \"1\";\n      // GOOGLE_APPLICATION_CREDENTIALS is a path the runner materialized; it\n      // arrives through `configEnv` or ambient, never from `credential`.\n      set(\"ANTHROPIC_VERTEX_PROJECT_ID\", params?.project);\n      set(\"CLOUD_ML_REGION\", params?.location);\n      break;\n    }\n    case \"foundry\": {\n      env.CLAUDE_CODE_USE_FOUNDRY = \"1\";\n      // §1.3: an explicit `base_url` wins over the resource-derived endpoint,\n      // and the SDK has a separate var for each form.\n      if (entry.base_url) set(\"ANTHROPIC_FOUNDRY_BASE_URL\", entry.base_url);\n      else set(\"ANTHROPIC_FOUNDRY_RESOURCE\", params?.resource);\n      set(\"ANTHROPIC_FOUNDRY_API_KEY\", credential);\n      break;\n    }\n    case \"anthropic\": {\n      const baseUrl = normalizeAnthropicBaseUrl(resolveEntryBaseUrl(entry));\n      if (baseUrl && baseUrl.toLowerCase() !== ANTHROPIC_DEFAULT_BASE_URL) {\n        env.ANTHROPIC_BASE_URL = baseUrl;\n      }\n      if (kind === \"bearer\") set(\"ANTHROPIC_AUTH_TOKEN\", credential);\n      else if (kind === \"api_key_header\") set(\"ANTHROPIC_API_KEY\", credential);\n      if (!credential) {\n        // `oauth` / `none` / an unresolved ref: the ambient carriers are the\n        // only auth this session has, and the scrub just removed them.\n        if (ambient.authToken) env.ANTHROPIC_AUTH_TOKEN = ambient.authToken;\n        else set(\"ANTHROPIC_API_KEY\", ambient.apiKey);\n      }\n      break;\n    }\n  }\n\n  return env;\n}\n","/**\n * Poisoned-transcript repair for the Claude Agent SDK harness.\n *\n * The Anthropic Messages API can permanently reject a conversation once its\n * persisted history contains a malformed content block. Because the bad block\n * lives in the SDK's on-disk JSONL transcript, every replayed turn fails with\n * the same `400 invalid_request_error` and the session is bricked with no\n * in-band recovery.\n *\n * This module repairs the transcript in place, covering three known poison\n * classes:\n *\n * 1. **Image `media_type` mismatch / omission.** An image block whose declared\n *    `media_type` does not match — or is missing for — the actual bytes:\n *    `... The image was specified using the image/png media type, but the\n *    image appears to be a image/jpeg image`. Produced by the Claude Code\n *    `Read` tool's format fallback (anthropics/claude-code#55338, #30124,\n *    #33179). Repaired by sniffing the base64 magic bytes and correcting\n *    `media_type`.\n * 2. **Oversized image.** An image whose decoded payload exceeds the API's\n *    5 MB per-image limit (anthropics/claude-code#34566). Replaced with a\n *    text stub — the byte budget cannot be recovered any other way.\n * 3. **`cache_control` on an empty text block.** A text block carrying a\n *    `cache_control` marker with empty/whitespace `text`\n *    (anthropics/claude-code#59626). The `cache_control` field is stripped.\n *\n * Genuinely unidentifiable image blocks are also replaced with a text stub.\n *\n * Recovering by content scan (rather than parsing the API's `messages.N`\n * index) is deliberate: the index addresses the assembled API request, not a\n * JSONL line, and reproducing the SDK's message-assembly is fragile. A full\n * scan is index-free and repairs every poisoned block in one pass.\n *\n * **Async and line-streaming since #454.** A Claude Code transcript is routinely\n * multi-megabyte (base64 images inline in `tool_result` blocks), and this runs on\n * a failed turn *and before every resume* — inside the single-threaded `skaile\n * serve` loop. The previous `readFileSync` + `writeFileSync` + `renameSync` held\n * the loop for the whole file and materialised it twice over as one string. Both\n * passes now stream line by line off a `createReadStream`, so the loop is yielded\n * between lines and peak memory is one JSONL line rather than the whole file, and\n * every I/O phase is deadline-bounded.\n *\n * Streaming was chosen over a worker thread: the work is I/O-bound rather than\n * CPU-bound (per-line `JSON.parse` on a yielded loop is not what stalls a turn),\n * and a worker would add a structured-clone of the same multi-MB payload plus a\n * thread lifecycle to a path that must never block a turn.\n *\n * @module\n */\n\nimport { createReadStream, createWriteStream } from \"node:fs\";\nimport { readdir, rename, stat, unlink } from \"node:fs/promises\";\nimport { join } from \"node:path\";\nimport { pipeline } from \"node:stream/promises\";\nimport { fsDeadlineMs, tryWithFsDeadline, withFsDeadline } from \"@skaile/workspaces/core\";\n\n/**\n * Minimal logger shape accepted by {@link scrubPoisonedTranscript}. Compatible\n * with the bridge `Logger`, but narrowed so the helper stays unit-testable\n * without a real logger instance.\n *\n * @category Transcript repair\n */\nexport interface ScrubLogger {\n  info(message: string, data?: Record<string, unknown>): void;\n  warn(message: string, data?: Record<string, unknown>): void;\n}\n\n/**\n * Options for {@link scrubPoisonedTranscript}.\n *\n * @category Transcript repair\n */\nexport interface ScrubTranscriptOptions {\n  /**\n   * Claude Code config directory — the parent of `projects/`. Resolve from\n   * `CLAUDE_CONFIG_DIR`, falling back to `~/.claude`.\n   */\n  configDir: string;\n  /** SDK session id whose transcript JSONL should be repaired. */\n  sessionId: string;\n  /** Optional logger for diagnostics. */\n  log?: ScrubLogger;\n  /**\n   * Where the transcript is read and written. Defaults to this process's own\n   * filesystem access ({@link localTranscriptStore}); with the agent uid split\n   * the transcript belongs to the agent uid and must be reached through it.\n   */\n  store?: TranscriptStore;\n}\n\n/**\n * Filesystem access to Claude Code transcripts. The CLI creates them 0600 in\n * 0700 dirs, so when it runs as a different uid than the runner, only that uid\n * can locate, read or rewrite them (see `agent-transcript.ts`).\n *\n * @category Transcript repair\n */\nexport interface TranscriptStore {\n  /** Path of `<sessionId>.jsonl` under `<configDir>/projects/`, or `null` when absent. */\n  locate(configDir: string, sessionId: string, timeoutMs?: number): Promise<string | null>;\n  /** The file's contents as UTF-8 chunks. */\n  read(filePath: string): AsyncIterable<string>;\n  /** Atomically replace the file with `chunks` via a `.scrub-tmp` sibling. */\n  replace(filePath: string, chunks: AsyncIterable<string>): Promise<void>;\n  /** Remove the sibling a failed or abandoned {@link replace} left (best effort). */\n  discardTemp(filePath: string): Promise<void>;\n}\n\n/**\n * Outcome of a {@link scrubPoisonedTranscript} pass.\n *\n * @category Transcript repair\n */\nexport interface ScrubTranscriptResult {\n  /** The located JSONL transcript path, or `null` when not found. */\n  filePath: string | null;\n  /** Image blocks whose `media_type` was corrected (or filled in) to match the bytes. */\n  corrected: number;\n  /**\n   * Image blocks replaced with a text stub — either unidentifiable bytes or a\n   * payload over the API's 5 MB per-image limit.\n   */\n  stubbed: number;\n  /** Empty text blocks from which a rejected `cache_control` marker was stripped. */\n  cacheStripped: number;\n  /**\n   * `true` when the transcript was located, contained at least one poisoned\n   * block, and was rewritten. `false` means nothing needed repair (or the\n   * file was not found) — the caller should not retry the resume.\n   */\n  changed: boolean;\n  /**\n   * The last valid `cost-state` entry of this session, read during the same\n   * pass. The CLI restores its run totals from it on `--resume`, so it is the\n   * baseline of the resumed spawn's first `total_cost_usd` and `modelUsage`.\n   * `null` when the transcript holds none (the CLI then starts from zero) or\n   * could not be read.\n   */\n  costState: TranscriptCostState | null;\n}\n\n/**\n * The run totals the Claude Code CLI saves into a transcript as a\n * `{\"type\":\"cost-state\"}` entry and restores on `--resume`.\n *\n * @category Transcript repair\n */\nexport interface TranscriptCostState {\n  /** The CLI's run-cumulative `total_cost_usd` at the time of the save. */\n  totalCostUSD: number;\n  /** The CLI's run-cumulative per-model usage, keyed by model id, in SDK field names. */\n  modelUsage: Record<string, Record<string, number>>;\n}\n\n/** Text inserted in place of an image block whose format cannot be identified. */\nconst STUB_TEXT = \"[image removed: unprocessable image data]\";\n\n/** Text inserted in place of an image block that exceeds the API size limit. */\nconst STUB_TEXT_OVERSIZED = \"[image removed: image too large]\";\n\n/**\n * The Anthropic Messages API rejects any single image whose decoded payload\n * exceeds 5 MB. An image at or under this is left alone; a larger one is\n * stubbed (its byte budget cannot be recovered).\n */\nconst MAX_IMAGE_BYTES = 5 * 1024 * 1024;\n\n/**\n * Identify an image's media type from the leading bytes of its base64 payload.\n *\n * Recognises the four formats the Anthropic API accepts. Returns `null` when\n * the magic bytes match no known format — the caller treats that as a\n * genuinely corrupt block and stubs it.\n *\n * @param base64 - Base64-encoded image data (only the prefix is inspected).\n * @returns An `image/*` media type, or `null` when unrecognised.\n * @category Transcript repair\n */\nexport function sniffImageMediaType(base64: string): string | null {\n  let buf: Buffer;\n  try {\n    // 32 base64 chars decode to 24 bytes — enough for the WebP check at 12.\n    buf = Buffer.from(base64.slice(0, 32), \"base64\");\n  } catch {\n    return null;\n  }\n  if (buf.length < 4) {\n    return null;\n  }\n  // JPEG — SOI marker `FF D8`. Third byte varies (and may be corrupt), so a\n  // two-byte check is intentional: it still matches malformed JPEGs, which is\n  // exactly the poison case the API flags as \"appears to be image/jpeg\".\n  if (buf[0] === 0xff && buf[1] === 0xd8) {\n    return \"image/jpeg\";\n  }\n  // PNG — `89 50 4E 47`.\n  if (buf[0] === 0x89 && buf[1] === 0x50 && buf[2] === 0x4e && buf[3] === 0x47) {\n    return \"image/png\";\n  }\n  // GIF — `47 49 46 38` (\"GIF8\").\n  if (buf[0] === 0x47 && buf[1] === 0x49 && buf[2] === 0x46 && buf[3] === 0x38) {\n    return \"image/gif\";\n  }\n  // WebP — `RIFF` at 0..3 and `WEBP` at 8..11.\n  if (\n    buf.length >= 12 &&\n    buf[0] === 0x52 &&\n    buf[1] === 0x49 &&\n    buf[2] === 0x46 &&\n    buf[3] === 0x46 &&\n    buf[8] === 0x57 &&\n    buf[9] === 0x45 &&\n    buf[10] === 0x42 &&\n    buf[11] === 0x50\n  ) {\n    return \"image/webp\";\n  }\n  return null;\n}\n\n/** A base64 image source on a content block (shape is SDK-defined). */\ninterface Base64ImageSource {\n  type?: string;\n  media_type?: string;\n  data?: string;\n}\n\n/** Loosely-typed content block from a transcript message. */\ninterface ContentBlockLike {\n  type?: string;\n  source?: Base64ImageSource;\n  content?: unknown;\n  [k: string]: unknown;\n}\n\n/** Mutable counters threaded through one scrub pass. */\ninterface ScrubCounters {\n  corrected: number;\n  stubbed: number;\n  cacheStripped: number;\n}\n\n/** Total repairs recorded in a counter set — used to detect per-line changes. */\nfunction totalChanges(c: ScrubCounters): number {\n  return c.corrected + c.stubbed + c.cacheStripped;\n}\n\n/**\n * Repair a single content block. Returns the (possibly replaced) block.\n *\n * - A `tool_result` block recurses into its `content` array.\n * - A text block carrying a `cache_control` marker whose `text` is empty or\n *   whitespace has the marker stripped (the API rejects `cache_control` on\n *   empty text blocks).\n * - An image block whose decoded payload exceeds the API's 5 MB limit is\n *   replaced with a text stub.\n * - An image block whose bytes match no known format is replaced with a text\n *   stub (an image cannot simply be dropped — a `tool_result` must keep at\n *   least one content entry, and a bare `image` block is replaced 1:1).\n * - An image block whose declared `media_type` mismatches (or is missing for)\n *   the sniffed type is corrected in place.\n * - Every other block is returned untouched.\n */\nfunction scrubBlock(block: ContentBlockLike, counters: ScrubCounters): ContentBlockLike {\n  if (block.type === \"tool_result\" && Array.isArray(block.content)) {\n    return {\n      ...block,\n      content: (block.content as ContentBlockLike[]).map((inner) => scrubBlock(inner, counters)),\n    };\n  }\n\n  // A `cache_control` marker on a text block whose text is empty or whitespace\n  // is rejected by the API (\"cache_control cannot be set for empty text\n  // blocks\"). Strip the marker — the empty block itself is harmless.\n  if (block.type === \"text\" && block.cache_control != null) {\n    const text = typeof block.text === \"string\" ? block.text : \"\";\n    if (text.trim() === \"\") {\n      counters.cacheStripped++;\n      const clone = { ...block };\n      delete clone.cache_control;\n      return clone;\n    }\n  }\n\n  if (\n    block.type === \"image\" &&\n    block.source?.type === \"base64\" &&\n    typeof block.source.data === \"string\"\n  ) {\n    const data = block.source.data;\n    // The API rejects any image whose decoded payload exceeds 5 MB. The byte\n    // budget cannot be salvaged, so the whole block becomes a text stub.\n    // base64 encodes 3 bytes per 4 chars, so decoded length ≈ len * 3 / 4.\n    if (Math.floor((data.length * 3) / 4) > MAX_IMAGE_BYTES) {\n      counters.stubbed++;\n      return { type: \"text\", text: STUB_TEXT_OVERSIZED };\n    }\n    const sniffed = sniffImageMediaType(data);\n    if (sniffed === null) {\n      counters.stubbed++;\n      return { type: \"text\", text: STUB_TEXT };\n    }\n    if (sniffed !== block.source.media_type) {\n      counters.corrected++;\n      return { ...block, source: { ...block.source, media_type: sniffed } };\n    }\n  }\n\n  return block;\n}\n\n/**\n * Locate the JSONL transcript for `sessionId` under `<configDir>/projects/`.\n *\n * Claude Code encodes the project directory into the `projects/` subfolder\n * name; rather than reproduce that encoding, this scans every subfolder for\n * `<sessionId>.jsonl` (the session id is a UUID — globally unique).\n *\n * Async and deadline-bounded since #454. The `existsSync(projectsDir)` probe is\n * gone: `readdir` already fails on a missing directory, so the probe was a\n * second stat on the same path for no information.\n *\n * `timeoutMs` defaults to {@link fsDeadlineMs} so callers that only need the\n * path (the resume probe) can omit it.\n *\n * @category Transcript repair\n */\nexport async function locateTranscriptPath(\n  configDir: string,\n  sessionId: string,\n  timeoutMs: number = fsDeadlineMs(),\n): Promise<string | null> {\n  const projectsDir = join(configDir, \"projects\");\n  const entries = await tryWithFsDeadline(\n    `readdir ${projectsDir}`,\n    () => readdir(projectsDir),\n    null,\n    timeoutMs,\n  );\n  if (!entries) return null;\n  for (const entry of entries) {\n    const candidate = join(projectsDir, entry, `${sessionId}.jsonl`);\n    const found = await tryWithFsDeadline(\n      `stat ${candidate}`,\n      async () => (await stat(candidate)).isFile(),\n      false,\n      timeoutMs,\n    );\n    if (found) return candidate;\n  }\n  return null;\n}\n\n/**\n * Yield a file's contents line by line, reproducing `readFileSync(...).split(\"\\n\")`\n * exactly — including the final (possibly empty) segment, so a trailing newline\n * survives a rewrite byte for byte.\n *\n * Splits on `\\n` alone, so a line out of a CRLF transcript arrives with its\n * `\\r` still attached. That carrier byte is part of the line here, and\n * {@link repairLine} re-attaches it to a line it rewrites — the file keeps the\n * terminator style it arrived with. Deliberately not `node:readline`:\n * `crlfDelay` strips the `\\r` outright (rewriting a CRLF transcript to LF) and\n * the interface swallows the trailing-newline distinction, either of which\n * would make the \"clean transcript is left byte-for-byte untouched\" guarantee\n * false. Only one line is held in memory at a time, so a multi-MB transcript\n * never materialises as a single string.\n */\nasync function* streamLines(chunks: AsyncIterable<string>): AsyncGenerator<string> {\n  let pending = \"\";\n  for await (const chunk of chunks) {\n    pending += chunk;\n    let idx = pending.indexOf(\"\\n\");\n    while (idx !== -1) {\n      yield pending.slice(0, idx);\n      pending = pending.slice(idx + 1);\n      idx = pending.indexOf(\"\\n\");\n    }\n  }\n  yield pending;\n}\n\n/**\n * The runner's own filesystem access: the default {@link TranscriptStore}.\n *\n * @category Transcript repair\n */\nexport const localTranscriptStore: TranscriptStore = {\n  locate: (configDir, sessionId, timeoutMs) =>\n    locateTranscriptPath(configDir, sessionId, timeoutMs),\n  async *read(filePath) {\n    const stream = createReadStream(filePath, { encoding: \"utf8\" });\n    try {\n      for await (const chunk of stream) yield chunk as string;\n    } finally {\n      stream.destroy();\n    }\n  },\n  async replace(filePath, chunks) {\n    const tmpPath = `${filePath}.scrub-tmp`;\n    await pipeline(chunks, createWriteStream(tmpPath, { encoding: \"utf8\" }));\n    await rename(tmpPath, filePath);\n  },\n  async discardTemp(filePath) {\n    const tmpPath = `${filePath}.scrub-tmp`;\n    await tryWithFsDeadline(`unlink ${tmpPath}`, () => unlink(tmpPath), undefined, fsDeadlineMs());\n  },\n};\n\n/**\n * Per-model counters the CLI's `cost-state` schema requires (checked against\n * `@anthropic-ai/claude-agent-sdk` 0.3.289; `thinkingTokens` is optional there).\n */\nconst COST_STATE_MODEL_FIELDS = [\n  \"inputTokens\",\n  \"outputTokens\",\n  \"cacheReadInputTokens\",\n  \"cacheCreationInputTokens\",\n  \"webSearchRequests\",\n  \"costUSD\",\n] as const;\n\nfunction isCount(value: unknown): value is number {\n  return typeof value === \"number\" && Number.isFinite(value) && value >= 0;\n}\n\n/**\n * Read a `cost-state` entry of `sessionId` off one JSONL line, or `null` when\n * the line is anything else. Mirrors the CLI, which skips an entry that fails\n * its schema and keeps the last valid one, so an entry with a bad total or a\n * per-model counter that is not a non-negative number is not a restorable\n * state. Leading NUL bytes (a torn append) are stripped, as the CLI does.\n */\nfunction readCostState(line: string, sessionId: string): TranscriptCostState | null {\n  if (!line.includes('\"cost-state\"')) return null;\n  let entry: { type?: unknown; sessionId?: unknown; totalCostUSD?: unknown; modelUsage?: unknown };\n  try {\n    entry = JSON.parse(line.replace(/^\\0+/, \"\"));\n  } catch {\n    return null;\n  }\n  if (entry.type !== \"cost-state\" || entry.sessionId !== sessionId) return null;\n  const total = entry.totalCostUSD;\n  if (!isCount(total)) return null;\n  const usage = entry.modelUsage;\n  if (!usage || typeof usage !== \"object\" || Array.isArray(usage)) return null;\n  for (const model of Object.values(usage)) {\n    if (!model || typeof model !== \"object\") return null;\n    const counters = model as Record<string, unknown>;\n    if (!COST_STATE_MODEL_FIELDS.every((field) => isCount(counters[field]))) return null;\n  }\n  return {\n    totalCostUSD: total,\n    modelUsage: usage as Record<string, Record<string, number>>,\n  };\n}\n\n/**\n * Repair one JSONL line, returning the (possibly rewritten) line and mutating\n * `counters`. A non-JSON, blank, or content-less line is returned untouched.\n *\n * The reader splits on `\\n` only, so a line from a CRLF transcript still carries\n * its trailing `\\r`. An untouched line is returned verbatim and keeps it; a\n * rewritten one is rebuilt by `JSON.stringify`, which would drop it — leaving a\n * repaired CRLF transcript with mixed line endings. So the terminator is split\n * off before the parse and re-appended to the rewritten line.\n */\nfunction repairLine(line: string, counters: ScrubCounters): string {\n  if (line.trim() === \"\") return line;\n  const eol = line.endsWith(\"\\r\") ? \"\\r\" : \"\";\n  const body = eol === \"\" ? line : line.slice(0, -1);\n  let entry: { message?: { content?: unknown } };\n  try {\n    entry = JSON.parse(body);\n  } catch {\n    return line; // Not JSON — leave untouched.\n  }\n  const content = entry.message?.content;\n  if (!Array.isArray(content)) return line;\n  const before = totalChanges(counters);\n  const scrubbed = (content as ContentBlockLike[]).map((block) => scrubBlock(block, counters));\n  if (totalChanges(counters) === before) return line; // Nothing changed on this line.\n  return `${JSON.stringify({ ...entry, message: { ...entry.message, content: scrubbed } })}${eol}`;\n}\n\n/**\n * Scan a Claude Code SDK transcript for image content blocks whose declared\n * `media_type` does not match the actual bytes, repair them, and atomically\n * rewrite the file.\n *\n * Safe to call after a turn has failed: the SDK query is dead at that point,\n * and the next resume re-reads the transcript from disk.\n *\n * **Async since #454.** Two streaming passes rather than one whole-file read:\n * pass 1 counts repairs without writing anything, and pass 2 runs only when\n * pass 1 found something. The common case — the preventive scrub of a clean\n * transcript before every resume — is therefore one streaming read and zero\n * writes, and a clean transcript is still left byte-for-byte untouched.\n *\n * @param opts - Config directory, session id, and an optional logger.\n * @returns A {@link ScrubTranscriptResult}. When `changed` is `true` the\n *   caller may retry the resume with the same session id.\n * @category Transcript repair\n */\nexport async function scrubPoisonedTranscript(\n  opts: ScrubTranscriptOptions,\n): Promise<ScrubTranscriptResult> {\n  const { configDir, sessionId, log } = opts;\n  const store = opts.store ?? localTranscriptStore;\n  const timeoutMs = fsDeadlineMs();\n  const result: ScrubTranscriptResult = {\n    filePath: null,\n    corrected: 0,\n    stubbed: 0,\n    cacheStripped: 0,\n    changed: false,\n    costState: null,\n  };\n\n  let filePath: string | null;\n  try {\n    filePath = await store.locate(configDir, sessionId, timeoutMs);\n  } catch (err) {\n    log?.warn(\"scrub-transcript: failed to locate transcript\", {\n      configDir,\n      sessionId,\n      error: err instanceof Error ? err.message : String(err),\n    });\n    return result;\n  }\n  if (!filePath) {\n    log?.warn(\"scrub-transcript: no transcript found\", { configDir, sessionId });\n    return result;\n  }\n  result.filePath = filePath;\n\n  // ── Pass 1: detect. Streams the transcript, counting repairs, writing nothing.\n  const counters: ScrubCounters = { corrected: 0, stubbed: 0, cacheStripped: 0 };\n  let costState: TranscriptCostState | null = null;\n  try {\n    await withFsDeadline(\n      `scan transcript ${filePath}`,\n      async () => {\n        for await (const line of streamLines(store.read(filePath))) {\n          repairLine(line, counters);\n          costState = readCostState(line, sessionId) ?? costState;\n        }\n      },\n      timeoutMs,\n    );\n  } catch (err) {\n    log?.warn(\"scrub-transcript: failed to read transcript\", {\n      filePath,\n      error: err instanceof Error ? err.message : String(err),\n    });\n    return result;\n  }\n\n  result.corrected = counters.corrected;\n  result.stubbed = counters.stubbed;\n  result.cacheStripped = counters.cacheStripped;\n  result.costState = costState;\n\n  if (totalChanges(counters) === 0) {\n    return result;\n  }\n\n  // ── Pass 2: rewrite. Atomic: stream a sibling temp file, then rename over the\n  // original. Line separators are re-emitted exactly as pass 1 split them, so a\n  // trailing newline and any blank lines survive verbatim.\n  const source = filePath;\n  try {\n    await withFsDeadline(\n      `rewrite transcript ${source}`,\n      async () => {\n        const discard: ScrubCounters = { corrected: 0, stubbed: 0, cacheStripped: 0 };\n        await store.replace(\n          source,\n          (async function* () {\n            let first = true;\n            for await (const line of streamLines(store.read(source))) {\n              yield first ? repairLine(line, discard) : `\\n${repairLine(line, discard)}`;\n              first = false;\n            }\n          })(),\n        );\n      },\n      timeoutMs,\n    );\n  } catch (err) {\n    log?.warn(\"scrub-transcript: failed to rewrite transcript\", {\n      filePath,\n      error: err instanceof Error ? err.message : String(err),\n    });\n    // Never leave a half-written `.scrub-tmp` in the SDK's projects dir, also\n    // when the deadline abandoned the replace mid-write.\n    await store.discardTemp(source).catch(() => {});\n    return result;\n  }\n\n  result.changed = true;\n  log?.info(\"scrub-transcript: repaired poisoned transcript\", {\n    filePath,\n    corrected: result.corrected,\n    stubbed: result.stubbed,\n    cacheStripped: result.cacheStripped,\n  });\n  return result;\n}\n","/**\n * Pre-first-turn resume probe for the Claude Agent SDK harness.\n *\n * A tier-1 native resume only hands its session id to the SDK inside the first\n * real turn, so the `jsonl_lost` outcome (\"No conversation found\") is invisible\n * until a turn is consumed. The runner shares the container filesystem with the\n * SDK, so a cheap `stat` of the on-disk JSONL transcript is an authoritative,\n * side-effect-free signal of whether the resume will find its history — no\n * probe query, no spurious model turn.\n *\n * @module\n */\n\nimport { homedir } from \"node:os\";\nimport { join } from \"node:path\";\nimport { withFsDeadline } from \"@skaile/workspaces/core\";\nimport { locateTranscriptPath } from \"./scrub-transcript.js\";\n\n/**\n * Overall wall-clock budget for the probe. Deliberately a small fraction of the\n * platform's `session_init_ack` timeout (`DEFAULT_INIT_ACK_TIMEOUT_MS`, 15s):\n * the probe runs synchronously on the pre-ack path, so a wedged\n * `CLAUDE_CONFIG_DIR` mount must never push the ack past its deadline.\n */\nconst RESUME_PROBE_TIMEOUT_MS = 2_000;\n\n/**\n * Outcome of {@link probeResumeTranscript}: whether the SDK transcript for a\n * requested tier-1 resume exists on disk.\n *\n * @category Resume probe\n */\nexport type ResumeProbeOutcome = \"transcript_found\" | \"jsonl_lost\";\n\n/**\n * Resolve the Claude Code config directory — the parent of `projects/` — from\n * an explicit env map, the process environment, or the `~/.claude` default.\n *\n * The runner's probe and the claude-sdk harness share this one resolver, so they\n * agree as long as they see the same `CLAUDE_CONFIG_DIR`. Today they do:\n * `CLAUDE_CONFIG_DIR` is container-scoped and neither side threads a per-session\n * override through `config.env`, so both fall through to `process.env`. If a\n * future change ever set the harness's `config.env.CLAUDE_CONFIG_DIR` to a\n * divergent path, the reactive `resume_failed { jsonl_lost }` turn remains the\n * safety net.\n *\n * @category Resume probe\n */\nexport function resolveClaudeConfigDir(env?: Record<string, string | undefined>): string {\n  return env?.CLAUDE_CONFIG_DIR || process.env.CLAUDE_CONFIG_DIR || join(homedir(), \".claude\");\n}\n\n/**\n * Probe whether the SDK JSONL transcript for `sessionId` exists on disk.\n *\n * Non-null locator result → `transcript_found`; null → `jsonl_lost`;\n * `undefined` → outcome unknown (the probe exceeded its budget or errored). The\n * caller leaves the ack field ABSENT on `undefined` so the reactive\n * `resume_failed { jsonl_lost }` turn stays the safety net — a timed-out probe\n * must never masquerade as a genuine `jsonl_lost` and force a needless downgrade.\n *\n * `opts.timeoutMs` overrides {@link RESUME_PROBE_TIMEOUT_MS}; `opts.locate`\n * overrides the transcript locator (used by tests / alternate stores).\n *\n * @category Resume probe\n */\nexport async function probeResumeTranscript(\n  sessionId: string,\n  opts?: {\n    env?: Record<string, string | undefined>;\n    timeoutMs?: number;\n    locate?: (configDir: string, sessionId: string) => Promise<string | null>;\n  },\n): Promise<ResumeProbeOutcome | undefined> {\n  const configDir = resolveClaudeConfigDir(opts?.env);\n  const timeoutMs = opts?.timeoutMs ?? RESUME_PROBE_TIMEOUT_MS;\n  const locate = opts?.locate ?? locateTranscriptPath;\n  try {\n    // Bound the whole probe on wall-clock and THROW on expiry: the inner per-op\n    // deadline swallows a timeout into a null path (a false `jsonl_lost`), so a\n    // wedged mount must yield \"unknown\" here rather than a spurious downgrade.\n    const filePath = await withFsDeadline(\n      `resume-probe ${sessionId}`,\n      () => locate(configDir, sessionId),\n      timeoutMs,\n    );\n    return filePath ? \"transcript_found\" : \"jsonl_lost\";\n  } catch {\n    return undefined;\n  }\n}\n","import { type ChildProcess, spawn } from \"node:child_process\";\nimport { join } from \"node:path\";\nimport { fsDeadlineMs, withFsDeadline } from \"@skaile/workspaces/core\";\nimport { resolveAgentExec } from \"./agent-exec.js\";\nimport { localTranscriptStore, type TranscriptStore } from \"./harnesses/scrub-transcript.js\";\n\n/**\n * Transcripts reached through the agent launch shim.\n *\n * With the uid split on, the Claude CLI runs as the agent uid and creates its\n * transcripts 0600 in 0700 dirs, so the runner can no longer list, read or\n * rewrite them itself. This store runs plain tools (`find`, `cat`, `sh`, `mv`)\n * as the agent uid through the shim instead. The child gets only `PATH` and\n * `LC_ALL`, never the runner's environment, and runs in `/` because the\n * runner's own cwd may not be enterable by the agent uid.\n */\nexport function agentTranscriptStore(shim: string): TranscriptStore {\n  // A replace the scrub's deadline abandoned keeps running; discardTemp stops\n  // it before removing its temp file.\n  const inFlight = new Map<string, ChildProcess>();\n  // Paths whose rewrite discardTemp gave up on: their rename must never run.\n  const cancelled = new Set<string>();\n  const track = (filePath: string, child: ChildProcess) => {\n    inFlight.set(filePath, child);\n    child.once(\"close\", () => {\n      if (inFlight.get(filePath) === child) inFlight.delete(filePath);\n    });\n  };\n  return {\n    async locate(configDir, sessionId, timeoutMs = 10_000) {\n      // A session id is a UUID; anything glob- or path-shaped is not ours.\n      if (!/^[A-Za-z0-9._-]+$/.test(sessionId)) return null;\n      const projectsDir = join(configDir, \"projects\");\n      // Markers on stdout, not exit codes, carry the answer: a shim or launcher\n      // failure has exit codes of its own and must never read as \"not found\".\n      const { stdout } = await collect(\n        runAsAgent(shim, [\n          \"sh\",\n          \"-c\",\n          '[ -d \"$1\" ] || { echo \"@@no-projects\"; exit 0; }; ' +\n            'find \"$1\" -mindepth 2 -maxdepth 2 -type f -name \"$2\" -print -quit; echo \"@@find:$?\"',\n          \"sh\",\n          projectsDir,\n          `${sessionId}.jsonl`,\n        ]),\n        timeoutMs,\n      );\n      const lines = stdout.split(\"\\n\").map((l) => l.trim());\n      // A missing projects/ is the same \"not found\" as a failed readdir locally.\n      if (lines.includes(\"@@no-projects\")) return null;\n      const status = lines.find((l) => l.startsWith(\"@@find:\"));\n      if (status === undefined)\n        throw new Error(\"locating a transcript as the agent uid failed (no answer from the shim)\");\n      // A path find printed counts even if it later hit an unreadable sibling.\n      const found = lines.find((l) => l.startsWith(\"/\"));\n      if (found) return found;\n      if (status !== \"@@find:0\")\n        throw new Error(`locating a transcript as the agent uid failed (${status.slice(2)})`);\n      return null;\n    },\n\n    async *read(filePath) {\n      const child = runAsAgent(shim, [\"cat\", \"--\", filePath]);\n      const exited = exitOf(child);\n      exited.catch(() => {}); // awaited below; this only stops an unhandled rejection\n      const stderr = drain(child);\n      child.stdout?.setEncoding(\"utf8\");\n      for await (const chunk of child.stdout as AsyncIterable<string>) yield chunk;\n      const code = await exited;\n      if (code !== 0)\n        throw new Error(`reading ${filePath} as the agent uid failed: ${await stderr}`);\n    },\n\n    async replace(filePath, chunks) {\n      const child = runAsAgent(shim, [\n        \"sh\",\n        \"-c\",\n        // 0600 like the CLI's own files. Only writes the temp file: the rename\n        // is a separate step below, run only after the input was fully sent,\n        // so a killed or starved writer can never commit a partial transcript.\n        'umask 077; cat > \"$1.scrub-tmp\"',\n        \"sh\",\n        filePath,\n      ]);\n      cancelled.delete(filePath);\n      track(filePath, child);\n      const exited = exitOf(child);\n      exited.catch(() => {}); // awaited below; this only stops an unhandled rejection\n      const stderr = drain(child);\n      const stdin = child.stdin;\n      if (!stdin) throw new Error(\"agent shim has no stdin\");\n      // A child that dies early surfaces through its exit code, not an EPIPE crash.\n      stdin.on(\"error\", () => {});\n      const gone = exited.then(\n        () => undefined,\n        () => undefined,\n      );\n      // Stop pulling input as soon as the child is gone (killed by discardTemp,\n      // or failed), instead of waiting on a producer that may never resume.\n      const input = chunks[Symbol.asyncIterator]();\n      let drained = false;\n      try {\n        for (;;) {\n          const next = await Promise.race([\n            input.next(),\n            gone.then(() => ({ dead: true as const })),\n          ]);\n          if (\"dead\" in next || stdin.destroyed) break;\n          if (next.done) {\n            drained = true;\n            break;\n          }\n          if (!stdin.write(next.value)) {\n            await Promise.race([new Promise((resolve) => stdin.once(\"drain\", resolve)), gone]);\n          }\n        }\n      } finally {\n        stdin.end();\n        // Close the producer too, so the reader feeding it (a `cat` through\n        // the shim) is torn down rather than left blocked on a full pipe.\n        if (!drained) void input.return?.()?.catch(() => {});\n      }\n      const code = await exited;\n      if (code !== 0 || !drained)\n        throw new Error(`rewriting ${filePath} as the agent uid failed: ${await stderr}`);\n      if (cancelled.has(filePath)) throw new Error(`rewrite of ${filePath} was abandoned`);\n      const mover = runAsAgent(shim, [\"mv\", \"-f\", \"--\", `${filePath}.scrub-tmp`, filePath]);\n      track(filePath, mover);\n      const moved = await collect(mover, 10_000);\n      if (moved.code !== 0) throw new Error(`renaming the rewritten ${filePath} failed`);\n    },\n\n    async discardTemp(filePath) {\n      // Before anything else, so a writer that is just finishing never renames.\n      cancelled.add(filePath);\n      const pending = inFlight.get(filePath);\n      if (pending && pending.exitCode === null && pending.signalCode === null) {\n        // The writer cannot commit (the rename is a separate step), so this only\n        // stops it; bounded, since a writer stuck on a hung mount may never die.\n        const closed = new Promise((resolve) => pending.once(\"close\", resolve));\n        pending.kill(\"SIGKILL\");\n        await withFsDeadline(`stop the rewrite of ${filePath}`, () => closed, fsDeadlineMs());\n      }\n      await collect(runAsAgent(shim, [\"rm\", \"-f\", \"--\", `${filePath}.scrub-tmp`]), 10_000);\n    },\n  };\n}\n\n/**\n * The transcript store for this runner: through the agent shim when\n * `SKAILE_AGENT_EXEC` is set, the runner's own filesystem otherwise.\n */\nexport function transcriptStoreForRuntime(\n  env: Record<string, string | undefined> = process.env,\n): TranscriptStore {\n  const shim = resolveAgentExec(env);\n  return shim ? agentTranscriptStore(shim) : localTranscriptStore;\n}\n\nfunction runAsAgent(shim: string, argv: string[]): ChildProcess {\n  return spawn(shim, [\"--\", ...argv], {\n    cwd: \"/\",\n    env: { PATH: process.env.PATH ?? \"/usr/bin:/bin\", LC_ALL: \"C\" },\n    stdio: [\"pipe\", \"pipe\", \"pipe\"],\n  });\n}\n\nfunction exitOf(child: ChildProcess): Promise<number> {\n  return new Promise((resolve, reject) => {\n    child.once(\"error\", reject);\n    child.once(\"close\", (code) => resolve(code ?? 1));\n  });\n}\n\n/** Keep the last 1 KiB of stderr for the error message, and keep the pipe drained. */\nfunction drain(child: ChildProcess): Promise<string> {\n  return new Promise((resolve) => {\n    let tail = \"\";\n    child.stderr?.setEncoding(\"utf8\");\n    child.stderr?.on(\"data\", (c: string) => {\n      tail = (tail + c).slice(-1024);\n    });\n    child.stderr?.once(\"close\", () => resolve(tail.trim()));\n  });\n}\n\nasync function collect(\n  child: ChildProcess,\n  timeoutMs: number,\n): Promise<{ code: number; stdout: string }> {\n  let stdout = \"\";\n  child.stdout?.setEncoding(\"utf8\");\n  child.stdout?.on(\"data\", (c: string) => {\n    stdout += c;\n  });\n  void drain(child);\n  child.stdin?.end();\n  let timer: NodeJS.Timeout | undefined;\n  try {\n    const code = await Promise.race([\n      exitOf(child),\n      new Promise<never>((_, reject) => {\n        timer = setTimeout(() => {\n          child.kill(\"SIGKILL\");\n          reject(new Error(`agent shim did not answer within ${timeoutMs} ms`));\n        }, timeoutMs);\n      }),\n    ]);\n    return { code, stdout };\n  } finally {\n    clearTimeout(timer);\n  }\n}\n","import {\n  type AIProviderEntry,\n  type AIProviderRegistry,\n  type MergedAIProviderRegistry,\n  parseModelRef,\n  registryEntries,\n} from \"@skaile/workspaces/core/provider-registry\";\nimport { BUILTIN_HARNESS_CATALOG } from \"./registry.js\";\n\n/**\n * The line for a selected provider entry whose surface the Claude Agent SDK cannot speak, or\n * `undefined` when there is none. `skaile run` and `skaile repl` print it as one `!` line (runner\n * `credential-notice.ts`), so the harness logs the same text at `info`, which reaches the log\n * database but not the terminal (p1475).\n *\n * @param providerId - The entry the run selected.\n * @param entry - That registry entry.\n */\nexport function unsupportedSurfaceNotice(\n  providerId: string,\n  entry: AIProviderEntry,\n): string | undefined {\n  const supported = BUILTIN_HARNESS_CATALOG[\"claude-sdk\"].surfaces;\n  const surface = \"surface\" in entry ? entry.surface : undefined;\n  if (!surface || !supported || supported.includes(surface)) return undefined;\n  return `provider '${providerId}' uses the '${surface}' surface, which the Claude Agent SDK cannot speak (it speaks: ${supported.join(\", \")})`;\n}\n\n/**\n * {@link unsupportedSurfaceNotice} for a session: the entry its model selector names (an entry id,\n * or the head of `<providerId>/<modelId>`). `undefined` with no selector, or an entry it speaks.\n */\nexport function sessionSurfaceNotice(\n  registry: AIProviderRegistry | MergedAIProviderRegistry,\n  modelRef: string | undefined,\n): string | undefined {\n  const named = modelRef?.trim();\n  if (!named) return undefined;\n  const entries = registryEntries(registry);\n  const providerId = entries.some(([id]) => id === named)\n    ? named\n    : parseModelRef(named, registry)?.providerId;\n  const entry = entries.find(([id]) => id === providerId)?.[1];\n  return providerId && entry ? unsupportedSurfaceNotice(providerId, entry) : undefined;\n}\n"]}