@skaile/workspaces 5.1.0 → 5.1.1

package/CHANGELOG.md

@@ -1,5 +1,11 @@
 # Changelog
 
+## 5.1.1
+
+### Patch Changes
+
+- [#999](https://github.com/skaile-ai/workspaces/pull/999) [`906bd21`](https://github.com/skaile-ai/workspaces/commit/906bd213672e45e94d8b7b204d6335a12bc1c2eb) Thanks [@Frozen666](https://github.com/Frozen666)! - A fresh session's first turn now has its runner-managed MCP servers (excel, word, Library remote MCP servers) when a broker wake delivers them after the session was built: the runner rebuilds the not-yet-started session once before that turn.
+
 ## 5.1.0
 
 ### Minor Changes

package/dist/{chunk-G4T7MYTA.js → chunk-2EOPGGLY.js}

@@ -516,5 +516,5 @@ function walkForSkill(dir, skillId) {
 }
 
 export { awaitAgentEnd, resolveFlowPath, resumeFlow, runFlow };
-//# sourceMappingURL=chunk-G4T7MYTA.js.map
-//# sourceMappingURL=chunk-G4T7MYTA.js.map
+//# sourceMappingURL=chunk-2EOPGGLY.js.map
+//# sourceMappingURL=chunk-2EOPGGLY.js.map

package/dist/{chunk-G4T7MYTA.js.map → chunk-2EOPGGLY.js.map}

@@ -1 +1 @@
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* runFlow / resumeFlow — CLI entry helpers for the flow connector.\n *\n * Moved from `runner/src/runner.ts` to `factory-assets/connectors/flow/run-flow.ts`\n * in Phase 3 of the flow-connector extraction (2026-05-08). Behaviour is\n * byte-identical to the previous runner-side implementation; only the log\n * source changes from `runner:flow:<runId>` to `flow-connector:run:<runId>`.\n *\n * The runner re-exports these symbols with a deprecation warning for one\n * release. CLI consumers should switch to\n * `import { runFlow, resumeFlow } from \"@skaile/workspaces/factory-assets/connectors/flow/run-flow\"`.\n *\n * Internal runner helpers (FlowOrchestrator, bootstrapRunnerLogStore,\n * createAgentSession, resolveDriverPaths, session helpers) are loaded lazily\n * via dynamic `await import(\"@skaile/workspaces/runner\")` inside\n * `loadRunnerModule()` below. The lazy load avoids a static package-level\n * cycle (runner → connectors → factory-assets → runner) — the cycle exists at\n * the workspace level but never resolves at module-load time because\n * factory-assets only ever calls `import` from inside an async function body.\n * The string-literal specifier preserves `bun --compile` and tsup static\n * analysis.\n */\n\nimport fs from \"node:fs\";\nimport path from \"node:path\";\nimport type { AgentEvent } from \"@skaile/workspaces/bridge\";\nimport {\n  findKindDirs,\n  isValidAssetName,\n  resolveAgentDir,\n  resolveSettings,\n  resolveSkWorkspaceConfig,\n} from \"@skaile/workspaces/core\";\nimport { createLogger } from \"@skaile/workspaces/core/logging\";\nimport { parseSkillFrontmatter, validateFlowVersions } from \"@skaile/workspaces/resolver\";\nimport { initTelemetry } from \"@skaile/workspaces/telemetry\";\nimport type { FlowExecution, FlowPromptEvent } from \"@skaile/workspaces/types\";\nimport * as z from \"zod\";\nimport { FlowAdapter } from \"./adapter.js\";\nimport {\n  findFlowFileInRoots,\n  FLOW_FILE_EXTENSIONS,\n  type FlowLookupMiss,\n  flowLookupRoots,\n  loadFlow,\n} from \"./engine/index.js\";\nimport { flowSkillVersionPins } from \"./engine/node-shape.js\";\nimport { SessionInlineSubFlowRunner } from \"./inline-sub-flow-host.js\";\nimport { SessionNodeExecutor } from \"./node-executor.js\";\nimport { driveOrchestratorTurn } from \"./orchestrator-turn.js\";\nimport { renderStimulusPrompt, type TurnStimulus } from \"./prompt-fragments.js\";\nimport { SessionSubpromptRunner } from \"./subprompt-runner.js\";\n\n/**\n * Lazy `import(\"@skaile/workspaces/runner\")` accessor. Cached on first call so\n * subsequent `runFlow` invocations don't re-evaluate the runner module.\n *\n * Dynamic ESM import is used (not `require`) so vitest and other ESM\n * bundlers honour their alias resolution — `require` would side-step the\n * configured aliases and pick up two distinct module instances when run\n * under vitest. The string-literal specifier ensures bun --compile keeps\n * the dependency (per the static-import-or-die rule in\n * connectors/CLAUDE.md).\n */\n// eslint-disable-next-line @typescript-eslint/no-explicit-any\nlet _runnerModule: any | undefined;\n// eslint-disable-next-line @typescript-eslint/no-explicit-any\nasync function loadRunnerModule(): Promise<any> {\n  if (_runnerModule) return _runnerModule;\n  _runnerModule = await import(\"@skaile/workspaces/runner\");\n  return _runnerModule;\n}\n\n/** Type-only re-export of SessionState so the runner tombstone shim still works. */\nexport type SessionState = import(\"@skaile/workspaces/runner\").SessionState;\n\n/** Maximum agent session duration (4 hours). Configurable via {@link RunOptions.sessionTimeoutMs}. */\nconst DEFAULT_SESSION_TIMEOUT_MS = 4 * 60 * 60 * 1000; // 4 hours\n\nconst FLOW_AGENT_OPERATION_NAMES = new Set([\n  \"get_available\",\n  \"get_state\",\n  \"get_globals\",\n  \"build_handoff\",\n  \"validate_node\",\n  \"start_node\",\n  \"request_approval\",\n  \"request_input\",\n  \"complete_node\",\n  \"skip_node\",\n  \"fail_node\",\n]);\n\n/**\n * Options for {@link runFlow}.\n *\n * Wraps `FlowOrchestrator` with autonomous mode turned on by default. First-class\n * gate nodes remain mandatory human decisions in every mode.\n *\n * @docLink packages/factory-assets/flow#run-flow\n */\nexport interface RunOptions {\n  /** The working directory for the project being orchestrated. */\n  projectDir: string;\n  /** Absolute path to the `.flow.yaml` or `.flow.json` definition file. */\n  flowPath: string;\n  /**\n   * Directory containing `agent.yaml`, `SOUL.md`, `RULES.md`, `knowledge/`.\n   * Resolved from `skaile.yaml` via `resolveAgentDir` when absent.\n   */\n  agentDir?: string;\n  /**\n   * Agent harness. Defaults to `settings.driver` (`\"omp\"` or `\"claude-sdk\"`).\n   */\n  driver?: string;\n  /**\n   */\n  /**\n   * Model name override. Falls back to `settings.model` when absent.\n   */\n  model?: string;\n  /**\n   * Path to a specific `settings.json` to load instead of the default\n   * layered resolution chain (project → parent → global → built-in defaults).\n   */\n  settingsFile?: string;\n  /**\n   * When `true`, prints the initial flow state without starting the agent\n   * and returns immediately.\n   */\n  dryRun?: boolean;\n  /**\n   * Per-session timeout in milliseconds. Defaults to\n   * {@link DEFAULT_SESSION_TIMEOUT_MS} (4 hours).\n   */\n  sessionTimeoutMs?: number;\n  /** Optional human-readable label shown in the session list. */\n  sessionLabel?: string;\n  /** Autonomous mode for CLI runs. Defaults to true; first-class gate nodes are never bypassed. */\n  autonomousMode?: boolean;\n  /**\n   * Called for each {@link AgentEvent} emitted during the run\n   * (e.g. `text`, `tool_call`, `state_changed`).\n   */\n  onEvent?: (event: AgentEvent) => void;\n  /**\n   * Called for each diagnostic log line. Defaults to `process.stdout`.\n   */\n  onLog?: (line: string) => void;\n}\n\n/**\n * Options for resuming an existing CLI session.\n *\n * Reconnects the driver's conversation thread (conversation history is\n * preserved via the stored `driverSessionId`) but restarts flow execution\n * from scratch — flow state is not persisted in CLI mode. For governed,\n * resumable flow runs use a host that persists flow state (e.g. the Skaile\n * platform).\n *\n * @docLink packages/factory-assets/flow#resume-flow\n */\nexport interface ResumeOptions {\n  /** The working directory for the project being orchestrated. */\n  projectDir: string;\n  /**\n   * Specific run ID to resume. When absent, the current session pointer\n   * at `<projectDir>/.skaile/current` is used.\n   */\n  sessionId?: string;\n  /**\n   * Agent definition directory override. Defaults to the directory stored\n   * in the session file.\n   */\n  agentDir?: string;\n  /**\n   * When `true`, prints the initial flow state without starting the agent\n   * and returns immediately.\n   */\n  dryRun?: boolean;\n  /**\n   * Per-session timeout in milliseconds. Defaults to\n   * {@link DEFAULT_SESSION_TIMEOUT_MS} (4 hours).\n   */\n  sessionTimeoutMs?: number;\n  /**\n   * Called for each {@link AgentEvent} emitted during the run.\n   */\n  onEvent?: RunOptions[\"onEvent\"];\n  /**\n   * Called for each diagnostic log line. Defaults to `process.stdout`.\n   */\n  onLog?: RunOptions[\"onLog\"];\n}\n\n// ---------------------------------------------------------------------------\n// Public API\n// ---------------------------------------------------------------------------\n\n/**\n * Start a new flow session from the CLI.\n *\n * Wraps `FlowOrchestrator` with autonomous mode turned on by default. The\n * runner remains idle between turns; first-class gates always park for a human\n * decision, including in autonomous mode. Non-CLI hosts (Skaile platform,\n * Pichi) use the orchestrator directly via the serve command surface and drive\n * gates through user actions.\n *\n * @docLink packages/factory-assets/flow#run-flow\n */\nexport async function runFlow(opts: RunOptions): Promise<void> {\n  const runner = await loadRunnerModule();\n  const {\n    bootstrapRunnerLogStore,\n    bootstrapCapabilityRegistry,\n    CapabilityRegistry,\n    createAgentSession,\n    createSessionStimulusBus,\n    defineCapability,\n    registerCompositionCapabilities,\n    resolveDriverPaths,\n    newSession,\n    saveSession,\n    touchSession,\n  } = runner;\n\n  const flow = loadFlow(opts.flowPath);\n  const agentDir = opts.agentDir ?? resolveAgentDir(opts.projectDir);\n  const settings = await resolveSettings(opts.projectDir, {\n    driver: opts.driver,\n    model: opts.model,\n  });\n\n  const session = newSession({\n    flowId: flow.id,\n    projectDir: opts.projectDir,\n    agentDir,\n    driver: settings.driver ?? \"omp\",\n    model: settings.model,\n    label: opts.sessionLabel,\n  });\n\n  await saveSession(opts.projectDir, session);\n\n  // Bootstrap structured logging — registers a process-singleton LogStore.\n  // OnLogBridgeSink mirrors entries to opts.onLog when caller provides one,\n  // preserving back-compat with CLI hosts that consume plain text lines.\n  const wsConfigEarly = resolveSkWorkspaceConfig(opts.projectDir);\n  const { dispose: disposeLogStore } = bootstrapRunnerLogStore({\n    sessionId: session.runId,\n    projectDir: opts.projectDir,\n    yamlBlock: wsConfigEarly.logging,\n    onLog: opts.onLog,\n  });\n  const flowLog = createLogger({\n    kind: \"flow-connector\",\n    subkind: \"run\",\n    instance: session.runId,\n  });\n  const log = (line: string) => flowLog.info(line);\n  const capabilityRegistry = new CapabilityRegistry();\n  bootstrapCapabilityRegistry(capabilityRegistry);\n  const capabilityHooks = {\n    sessionId: session.runId,\n    composeTools: () => capabilityRegistry.composeLLMTools(),\n    resolve: (name: string) =>\n      capabilityRegistry.list().find((cap: { name: string }) => cap.name === name) ?? null,\n    invoke: (name: string, input: unknown, _signal?: AbortSignal, callId?: string) =>\n      capabilityRegistry.invoke(name, input, { sessionId: session.runId, callId }),\n  };\n\n  try {\n    // ── Dry run ────────────────────────────────────────────────────────────\n    if (opts.dryRun) {\n      const adapter = new FlowAdapter();\n      const handle = await adapter.connect(\n        {\n          id: \"flow\",\n          driver: \"flow\",\n          access: \"read-only\" as const,\n          options: { flow, seed: { runId: session.runId, startedBy: \"cli\" } },\n        },\n        {}, // flow needs no connect context\n      );\n      const state = adapter.getExecution(handle);\n      const available = Object.values(state.nodes)\n        .filter((n) => n.status === \"available\")\n        .map((n) => n.id);\n      log(`[dry-run] Flow: ${flow.name} (${flow.id})`);\n      log(`[dry-run] Available: ${available.join(\", \") || \"(none)\"}`);\n      await adapter.disconnect(handle);\n      return;\n    }\n\n    await validatePinnedVersions(flow, opts.projectDir, log);\n\n    // ── Telemetry initialization ────────────────────────────────────────────\n    const wsConfig = wsConfigEarly;\n    const telemetry = await initTelemetry(wsConfig.telemetry);\n    const flowTrace = telemetry.startTrace({\n      name: `flow:${flow.id}`,\n      kind: \"flow_run\",\n      attributes: {\n        \"skaile.flow.id\": flow.id,\n        \"skaile.flow.run_id\": session.runId,\n      },\n    });\n\n    // ── Agent session setup ─────────────────────────────────────────────────\n    const driverPaths = resolveDriverPaths(settings);\n    const agentSession = await createAgentSession({\n      projectDir: opts.projectDir,\n      agentDir: session.agentDir,\n      driver: session.driver,\n      model: session.model,\n      resumeSessionId: session.driverSessionId,\n      projectClaudeMd: path.join(opts.projectDir, \"CLAUDE.md\"),\n      promptsDir: path.join(opts.projectDir, driverPaths.promptsDir),\n      sessionId: session.runId,\n      onLog: log,\n      telemetry,\n      trace: flowTrace,\n      wsConfig,\n      capabilities: capabilityHooks,\n      capabilityRegistry,\n    });\n    if (agentSession.composition?.discoverableEntries.length) {\n      registerCompositionCapabilities(\n        capabilityRegistry,\n        agentSession.composition.discoverableEntries,\n      );\n    }\n    const { driver } = agentSession;\n    const nodeExecutor = new SessionNodeExecutor({ workspaceDir: opts.projectDir });\n    // Same endpoints and credentials the session driver used: the registry\n    // and the credential env `createAgentSession` already resolved — not a\n    // new resolution, not a new secret channel.\n    const subpromptRunner = new SessionSubpromptRunner({\n      driverType: agentSession.driverType,\n      sessionModel: agentSession.model,\n      workspaceDir: opts.projectDir,\n      registry: agentSession.registry,\n      credentialEnv: agentSession.credentialEnv,\n      ...(agentSession.modelRef ? { modelRef: agentSession.modelRef } : {}),\n    });\n    let driverStarted = false;\n    const updatedSession = { ...session };\n\n    // Track driver session ID so future resumes can reconnect the SDK thread.\n    driver.on(\"agent-event\", () => {\n      const runtimeSessionId = driver.runtimeSessionId;\n      if (!runtimeSessionId || runtimeSessionId === updatedSession.driverSessionId) return;\n      updatedSession.driverSessionId = runtimeSessionId;\n      void saveSession(opts.projectDir, updatedSession).catch(() => {});\n    });\n\n    // ── FlowAdapter + stimulus bus ─────────────────────────────────────────\n    //\n    // Phase 4 of the flow-connector extraction: SessionStimulusBus is the sole\n    // turn driver. The legacy FlowOrchestrator + onStateChange subscription\n    // are gone — every turn is initiated either by the bus (after an adapter\n    // mutation observed via `useBusForStimulus: true`) or by an explicit\n    // `bus.signal()` call from this function (the initial flow_started turn).\n    //\n    // The bus's `driveTurn` callback receives the stimulus paragraph the\n    // adapter rendered (not the full orchestrator prompt). It hands the turn to\n    // `driveOrchestratorTurn`, which rebuilds the five-section prompt so the\n    // agent sees the same flow context the legacy orchestrator produced — and\n    // announces it, so a CLI consumer's `onEvent` stream carries the prompt too.\n    const flowConnectorId = \"flow\";\n    const turnTimeoutMs = opts.sessionTimeoutMs ?? DEFAULT_SESSION_TIMEOUT_MS;\n\n    const ensureDriverStarted = async (): Promise<void> => {\n      if (driverStarted) return;\n      await driver.start();\n      driverStarted = true;\n    };\n\n    // Same widening the `state_changed` forwarder below performs: `onEvent` is\n    // typed against the bridge's driver-level union, which has no case for a\n    // runtime-level event.\n    const emitFlowPrompt = (event: FlowPromptEvent): void => {\n      opts.onEvent?.(event as unknown as AgentEvent);\n    };\n\n    const inlineSubFlowRunner = new SessionInlineSubFlowRunner({\n      resolveFlow: (flowId) => loadFlow(resolveFlowPath(flowId, opts.projectDir)),\n      nodeExecutor,\n      subpromptRunner,\n      driveAgentTurn: async ({ flow: childFlow, execution, stimulus }) => {\n        await ensureDriverStarted();\n        await driveOrchestratorTurn({\n          flow: childFlow,\n          execution,\n          stimulus,\n          emit: emitFlowPrompt,\n          deliver: (prompt) => awaitAgentEnd(driver, prompt, opts.onEvent, turnTimeoutMs),\n        });\n      },\n    });\n\n    // Forward declaration so `driveTurn` can read the live execution\n    // snapshot. Assigned just below, before the bus can fire.\n    let flowAdapterRef: FlowAdapter | null = null;\n    let flowHandleRef: import(\"@skaile/workspaces/connectors\").ConnectorHandle | null = null;\n\n    const stimulusBus = createSessionStimulusBus({\n      driveTurn: async (\n        promptFragment: string,\n        metas: Array<Record<string, unknown>>,\n      ): Promise<void> => {\n        // The adapter signal carries `meta.kind` per stimulus. Use that to\n        // reconstruct the typed `TurnStimulus`; for compound batches, fall\n        // back to `state_changed` (the union element that means \"look at\n        // current state and continue\").\n        const lastKind = metas[metas.length - 1]?.kind;\n        let stimulus: TurnStimulus;\n        if (lastKind === \"flow_started\") {\n          stimulus = { kind: \"flow_started\" };\n        } else if (\n          lastKind === \"user_message\" &&\n          typeof metas[metas.length - 1]?.text === \"string\"\n        ) {\n          const meta = metas[metas.length - 1] as Record<string, unknown>;\n          stimulus = {\n            kind: \"user_message\",\n            text: String(meta.text ?? \"\"),\n            senderId: String(meta.senderId ?? \"user\"),\n          };\n        } else {\n          stimulus = { kind: \"state_changed\" };\n        }\n        // The fragment passed in by the bus is the adapter's\n        // `renderStimulusPrompt(stim)` joined across coalesced signals. It is\n        // discarded in favour of the structured stimulus, which\n        // `driveOrchestratorTurn` rebuilds the full prompt from; that keeps the\n        // prompt shape stable and the structured form already contains\n        // everything the fragment encoded.\n        void promptFragment;\n        if (!flowAdapterRef || !flowHandleRef) {\n          throw new Error(\"driveTurn fired before FlowAdapter was wired\");\n        }\n        await flowAdapterRef.drainRuntimeNodes(flowHandleRef);\n        const execution = flowAdapterRef.getExecution(flowHandleRef);\n        if (execution.done || execution.status === \"failed\" || execution.status === \"cancelled\") {\n          return;\n        }\n        if (!flowAdapterRef.shouldDriveAgentTurn(flowHandleRef, stimulus)) return;\n        await ensureDriverStarted();\n        await driveOrchestratorTurn({\n          flow,\n          execution,\n          stimulus,\n          emit: emitFlowPrompt,\n          deliver: (prompt) => awaitAgentEnd(driver, prompt, opts.onEvent, turnTimeoutMs),\n        });\n      },\n      log: flowLog,\n    });\n\n    const flowAdapter = new FlowAdapter();\n    const flowHandle = await flowAdapter.connect(\n      {\n        id: flowConnectorId,\n        driver: \"flow\",\n        access: \"read-write\" as const,\n        options: {\n          flow,\n          seed: {\n            runId: session.runId,\n            startedBy: \"cli\",\n            autonomousMode: opts.autonomousMode ?? true,\n          },\n          stimulusBus,\n          useBusForStimulus: true,\n          nodeExecutor,\n          subpromptRunner,\n          inlineSubFlowRunner,\n        },\n      },\n      {}, // flow needs no connect context\n    );\n    flowAdapterRef = flowAdapter;\n    flowHandleRef = flowHandle;\n\n    // Flow operations retain the connector's published bare protocol names;\n    // this is the intentional exception to generic capability namespaces.\n    for (const operation of flowAdapter.tools\n      .describeOperations(flowHandle)\n      .filter(({ name }) => FLOW_AGENT_OPERATION_NAMES.has(name))) {\n      const shape: Record<string, z.ZodType> = {};\n      for (const arg of operation.args) {\n        let schema: z.ZodType;\n        switch (arg.type) {\n          case \"boolean\":\n            schema = z.boolean();\n            break;\n          case \"number\":\n            schema = z.number();\n            break;\n          case \"json\":\n            schema = z.json();\n            break;\n          default:\n            schema = z.string();\n        }\n        shape[arg.name] = arg.required ? schema : schema.optional();\n      }\n      capabilityRegistry.register(\n        defineCapability({\n          name: operation.name,\n          displayName: operation.name,\n          description: operation.description,\n          input: z.object(shape),\n          side: \"agent\",\n          origin: { kind: \"flow\", flowId: flow.id },\n          scope: \"session\",\n          audience: [\"llm\"],\n          kind: operation.accessLevel === \"read\" ? \"query\" : \"effect\",\n          handler: async (args: Record<string, unknown>) =>\n            flowAdapter.executeOp(flowHandle, operation.name, args),\n        }),\n        \"agent\",\n      );\n    }\n\n    // Forward state_changed events to the caller. The bus computes a\n    // turn-kicking stimulus on each adapter mutation; the host-facing\n    // event stream still observes the full snapshot via onChange.\n    flowAdapter.onStateChange(flowHandle, (state: FlowExecution) => {\n      opts.onEvent?.({\n        type: \"state_changed\",\n        store: `flow:${state.runId}`,\n        state: state as unknown as Record<string, unknown>,\n      } as unknown as AgentEvent);\n    });\n\n    // ── Execute ────────────────────────────────────────────────────────────\n    flowLog.info(\"starting flow\", {\n      flowId: flow.id,\n      flowName: flow.name,\n      runId: session.runId,\n    });\n\n    try {\n      // Kick the initial flow_started turn explicitly. Subsequent turns are\n      // driven by the bus signaling whenever the adapter mutates.\n      const initialStimulus: TurnStimulus = { kind: \"flow_started\" };\n      await stimulusBus.signal(flowConnectorId, {\n        promptFragment: renderStimulusPrompt(initialStimulus),\n        meta: { kind: initialStimulus.kind },\n      });\n\n      const finalState = flowAdapter.getExecution(flowHandle);\n      if (finalState.done) {\n        flowLog.info(\"flow complete\", { flowId: flow.id, flowName: flow.name });\n      } else if (finalState.status === \"failed\") {\n        flowLog.error(\"flow failed\", undefined, { flowId: flow.id, flowName: flow.name });\n      } else {\n        flowLog.warn(\"flow paused awaiting further stimulus\", {\n          flowId: flow.id,\n          status: finalState.status,\n          note: \"CLI mode does not supply human approval/input decisions\",\n        });\n      }\n    } finally {\n      driver.kill();\n      const lastState = flowAdapter.getExecution(flowHandle);\n      await saveSession(\n        opts.projectDir,\n        touchSession({\n          ...updatedSession,\n          driverSessionId: driver.runtimeSessionId ?? updatedSession.driverSessionId,\n          status: lastState.status === \"complete\" ? \"complete\" : \"paused\",\n        }),\n      ).catch(() => {});\n      await flowAdapter.disconnect(flowHandle).catch(() => {});\n      await agentSession.dispose();\n      telemetry.endTrace(flowTrace, {\n        status: flowAdapter.getExecution(flowHandle).status === \"complete\" ? \"ok\" : \"error\",\n      });\n      await telemetry.flush().catch(() => {});\n    }\n  } finally {\n    disposeLogStore();\n  }\n}\n\n/**\n * Resume an existing session from the CLI.\n *\n * With the Phase 2 turn-based model, flow state is NOT persisted to\n * local session files — only the driver session ID is kept. The CLI\n * can resume the agent's conversation thread, but the flow execution\n * itself starts from scratch because the runner has no durable store\n * for per-run state.\n *\n * For a governed, resumable flow run, use a host that persists flow\n * state (e.g. the Skaile platform). CLI resume is retained as a\n * driver-level convenience only: we load the session, restart the\n * flow, and the SDK will reconnect to the prior conversation thread.\n *\n * @docLink packages/factory-assets/flow#resume-flow\n */\nexport async function resumeFlow(opts: ResumeOptions): Promise<void> {\n  const runner = await loadRunnerModule();\n  const { loadSession, loadSessionById, bootstrapRunnerLogStore } = runner;\n\n  const session = opts.sessionId\n    ? await loadSessionById(opts.projectDir, opts.sessionId)\n    : await loadSession(opts.projectDir);\n\n  if (!session) {\n    const hint = opts.sessionId\n      ? `session ${opts.sessionId}`\n      : `current session in ${opts.projectDir}/.skaile`;\n    throw new Error(`No session found (${hint}) — run 'start' first`);\n  }\n\n  const flowPath = resolveFlowPath(session.flowId, opts.projectDir);\n\n  // Bootstrap a transient logger for the resume diagnostics. The inner\n  // runFlow() call will register its own LogStore for the new run. Keep\n  // OnLogBridgeSink wiring so callers passing onLog still see this line.\n  const wsConfigEarly = resolveSkWorkspaceConfig(opts.projectDir);\n  const { dispose: disposeLogStore } = bootstrapRunnerLogStore({\n    sessionId: session.runId,\n    projectDir: opts.projectDir,\n    yamlBlock: wsConfigEarly.logging,\n    onLog: opts.onLog,\n  });\n  const flowLog = createLogger({\n    kind: \"flow-connector\",\n    subkind: \"run\",\n    instance: session.runId,\n  });\n  flowLog.info(\"resuming session\", {\n    runId: session.runId,\n    flowId: session.flowId,\n    note: \"CLI mode does not persist flow state — flow restarts from scratch; driver thread resumes\",\n  });\n\n  try {\n    await runFlow({\n      projectDir: opts.projectDir,\n      flowPath,\n      agentDir: opts.agentDir ?? session.agentDir,\n      driver: session.driver,\n      model: session.model,\n      sessionLabel: session.label,\n      dryRun: opts.dryRun,\n      sessionTimeoutMs: opts.sessionTimeoutMs,\n      onEvent: opts.onEvent,\n      onLog: opts.onLog,\n    });\n  } finally {\n    disposeLogStore();\n  }\n}\n\n// ---------------------------------------------------------------------------\n// Helpers\n// ---------------------------------------------------------------------------\n\nasync function validatePinnedVersions(\n  flow: Awaited<ReturnType<typeof loadFlow>>,\n  projectDir: string,\n  log: (line: string) => void,\n): Promise<void> {\n  const pinnedNodes = flowSkillVersionPins(flow);\n  if (pinnedNodes.length === 0) return;\n\n  const skillVersions = new Map<string, string>();\n  const aiResourcesDir = findAiResourcesDir(projectDir);\n  if (aiResourcesDir) {\n    for (const node of pinnedNodes) {\n      const skillId = node.skillId;\n      if (skillVersions.has(skillId)) continue;\n      const skillPath = findSkillMd(aiResourcesDir, skillId);\n      if (skillPath) {\n        const content = fs.readFileSync(skillPath, \"utf-8\");\n        const fm = parseSkillFrontmatter(content);\n        skillVersions.set(skillId, fm.metadata?.version ?? fm.version ?? \"\");\n      }\n    }\n  }\n\n  const checks = validateFlowVersions(pinnedNodes, skillVersions);\n  const failures = checks.filter((c) => !c.satisfied);\n  if (failures.length > 0) {\n    const lines = failures.map(\n      (f) => `  ${f.nodeId}: wants ${f.requested}, found ${f.actual || \"(none)\"}`,\n    );\n    throw new Error(`Skill version mismatch:\\n${lines.join(\"\\n\")}`);\n  }\n  for (const c of checks.filter((c) => c.satisfied)) {\n    log(`  Version OK: ${c.skillId} ${c.actual} satisfies ${c.requested}`);\n  }\n}\n\n/**\n * Assert `found` sits inside one of `roots`.\n *\n * A backstop, not the primary control: `isValidAssetName` already rejects every\n * id containing a separator, and `findFlowFileInRoots` skips any candidate that\n * escapes its search dir. So on today's code this cannot fire — it is here to\n * fail loudly rather than silently if a future lookup stops enforcing\n * containment itself. Widening the accepted extensions must never widen which\n * paths are reachable, and this is the line that keeps that honest.\n */\nfunction assertContainedInAnyRoot(found: string, roots: string[], flowId: string): void {\n  const resolved = path.resolve(found);\n  const inside = roots.some((root) => {\n    const relative = path.relative(path.resolve(root), resolved);\n    return !relative.startsWith(\"..\") && !path.isAbsolute(relative);\n  });\n  if (!inside) {\n    throw new Error(`Flow path escapes its lookup root: ${JSON.stringify(flowId)}`);\n  }\n}\n\n/** One line per near-miss: a file that is right there but was still rejected. */\nfunction describeMisses(misses: FlowLookupMiss[], heading: string): string {\n  const seen = new Set<string>();\n  const lines: string[] = [];\n  for (const miss of misses) {\n    if (seen.has(miss.path)) continue;\n    seen.add(miss.path);\n    lines.push(\n      miss.reason === \"id-mismatch\"\n        ? `  ${miss.path}: declares id ${JSON.stringify(miss.declaredId ?? \"\")}`\n        : `  ${miss.path}: could not be parsed (${miss.error ?? \"unknown error\"})`,\n    );\n  }\n  return lines.length > 0 ? `\\n${heading}\\n${lines.join(\"\\n\")}` : \"\";\n}\n\n/**\n * Resolve one flow identity through the CLI/serve host's normal lookup order —\n * the same roots and filenames `skaile run` and `flow list` use, via\n * {@link flowLookupRoots} / {@link findFlowFileInRoots}. Resolution is by the\n * **declared** `id`, not by filename.\n *\n * @throws {Error} When `flowId` is not a canonical asset name, when no file\n *   declares it, or when a match somehow resolves outside every lookup root.\n */\nexport function resolveFlowPath(flowId: string, projectDir: string): string {\n  // Sub-flow targets and resumed session records are the two callers, so an\n  // identity that is not canonical is a bug in the caller, not a missing file.\n  if (!isValidAssetName(flowId)) {\n    throw new Error(`Invalid canonical flow identity: ${JSON.stringify(flowId)}`);\n  }\n\n  const roots = flowLookupRoots(projectDir);\n  const misses: FlowLookupMiss[] = [];\n  const found = findFlowFileInRoots(flowId, roots, { onMiss: (m) => misses.push(m) });\n  if (found) {\n    assertContainedInAnyRoot(found, roots, flowId);\n    return found;\n  }\n\n  // A file that is present but unparseable is a different problem from a missing\n  // one, and \"not found\" is the wrong headline for it — that exact misdirection\n  // is what this change exists to remove, so don't reintroduce it here.\n  if (misses.length > 0 && misses.every((m) => m.reason === \"unparseable\")) {\n    throw new Error(\n      `Flow ${flowId} was found but could not be loaded.` + describeMisses(misses, \"Candidates:\"),\n    );\n  }\n\n  const shown = roots.slice(0, 3).join(\", \");\n  const more = roots.length > 3 ? \", …\" : \"\";\n  // Spelled from FLOW_FILE_EXTENSIONS so the message cannot drift from the\n  // candidate list the lookup actually probes.\n  const accepted = FLOW_FILE_EXTENSIONS.map((ext) => `${flowId}${ext}`).join(\" | \");\n  throw new Error(\n    `Flow not found: ${flowId}. Searched ${roots.length} root(s) (${shown || \"none\"}${more}) ` +\n      `for ${accepted} — flat, or inside a ${flowId}/ directory.` +\n      describeMisses(misses, \"Near misses:\"),\n  );\n}\n\n/** Walk up from projectDir to find ai-assets/ */\nfunction findAiResourcesDir(projectDir: string): string | null {\n  let dir = projectDir;\n  for (let i = 0; i < 6; i++) {\n    const candidate = path.join(dir, \"ai-assets\");\n    if (fs.existsSync(candidate)) return candidate;\n    const parent = path.dirname(dir);\n    if (parent === dir) break;\n    dir = parent;\n  }\n  return null;\n}\n\n/** Find SKILL.md for a given skill ID in any `skills/` directory under ai-assets */\nfunction findSkillMd(aiResourcesDir: string, skillId: string): string | null {\n  for (const skillsDir of findKindDirs(aiResourcesDir, \"skills\")) {\n    const found = walkForSkill(skillsDir, skillId);\n    if (found) return found;\n  }\n  return null;\n}\n\n// ---------------------------------------------------------------------------\n// Turn-wait helper\n// ---------------------------------------------------------------------------\n\n/**\n * Minimal driver surface needed by the bus's `driveTurn` callback. Mirrors\n * the slice the legacy `FlowOrchestrator` consumed (`prompt` + `on` +\n * `removeAllListeners`) so we can keep the wait helper private to this\n * module without pulling in a runtime dep on `@skaile/workspaces/bridge`.\n */\ninterface TurnDriverSurface {\n  prompt(message: string): Promise<void>;\n  on(event: \"agent-event\", handler: (event: AgentEvent) => void): void;\n  removeAllListeners(event: \"agent-event\"): void;\n}\n\n/**\n * Send a prompt to the driver and resolve when the agent emits\n * `agent_end` (or reject on an `error` that is not an in-place retry).\n * Identical contract to the legacy `awaitAgentEnd` helper from\n * `flow-orchestrator.ts`. Phase 4 lifts the helper into `run-flow.ts` because\n * the bus now owns turn driving. Exported for tests only.\n */\nexport function awaitAgentEnd(\n  driver: TurnDriverSurface,\n  prompt: string,\n  onEvent: ((event: AgentEvent) => void) | undefined,\n  timeoutMs: number,\n): Promise<void> {\n  return new Promise<void>((resolve, reject) => {\n    let settled = false;\n\n    const done = (err?: Error) => {\n      if (settled) return;\n      settled = true;\n      clearTimeout(timer);\n      driver.removeAllListeners(\"agent-event\");\n      if (err) reject(err);\n      else resolve();\n    };\n\n    const timer = setTimeout(\n      () => done(new Error(`Flow turn timed out after ${timeoutMs / 1000}s`)),\n      timeoutMs,\n    );\n\n    driver.on(\"agent-event\", (event: AgentEvent) => {\n      onEvent?.(event);\n      if (event.type === \"agent_end\") done();\n      // An in-place retry replays this same turn; its own end settles it.\n      else if (event.type === \"error\" && event.retrying !== true) {\n        const msg =\n          (event as { error?: string; message?: string }).error ??\n          (event as { message?: string }).message ??\n          \"Agent error\";\n        done(new Error(msg));\n      }\n    });\n\n    driver.prompt(prompt).catch(done);\n  });\n}\n\nfunction walkForSkill(dir: string, skillId: string): string | null {\n  for (const entry of fs.readdirSync(dir, { withFileTypes: true })) {\n    if (!entry.isDirectory()) continue;\n    const full = path.join(dir, entry.name);\n    const skillMd = path.join(full, \"SKILL.md\");\n    if (fs.existsSync(skillMd)) {\n      if (entry.name === skillId) return skillMd;\n    } else {\n      const found = walkForSkill(full, skillId);\n      if (found) return found;\n    }\n  }\n  return null;\n}\n"]}
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* runFlow / resumeFlow — CLI entry helpers for the flow connector.\n *\n * Moved from `runner/src/runner.ts` to `factory-assets/connectors/flow/run-flow.ts`\n * in Phase 3 of the flow-connector extraction (2026-05-08). Behaviour is\n * byte-identical to the previous runner-side implementation; only the log\n * source changes from `runner:flow:<runId>` to `flow-connector:run:<runId>`.\n *\n * The runner re-exports these symbols with a deprecation warning for one\n * release. CLI consumers should switch to\n * `import { runFlow, resumeFlow } from \"@skaile/workspaces/factory-assets/connectors/flow/run-flow\"`.\n *\n * Internal runner helpers (FlowOrchestrator, bootstrapRunnerLogStore,\n * createAgentSession, resolveDriverPaths, session helpers) are loaded lazily\n * via dynamic `await import(\"@skaile/workspaces/runner\")` inside\n * `loadRunnerModule()` below. The lazy load avoids a static package-level\n * cycle (runner → connectors → factory-assets → runner) — the cycle exists at\n * the workspace level but never resolves at module-load time because\n * factory-assets only ever calls `import` from inside an async function body.\n * The string-literal specifier preserves `bun --compile` and tsup static\n * analysis.\n */\n\nimport fs from \"node:fs\";\nimport path from \"node:path\";\nimport type { AgentEvent } from \"@skaile/workspaces/bridge\";\nimport {\n  findKindDirs,\n  isValidAssetName,\n  resolveAgentDir,\n  resolveSettings,\n  resolveSkWorkspaceConfig,\n} from \"@skaile/workspaces/core\";\nimport { createLogger } from \"@skaile/workspaces/core/logging\";\nimport { parseSkillFrontmatter, validateFlowVersions } from \"@skaile/workspaces/resolver\";\nimport { initTelemetry } from \"@skaile/workspaces/telemetry\";\nimport type { FlowExecution, FlowPromptEvent } from \"@skaile/workspaces/types\";\nimport * as z from \"zod\";\nimport { FlowAdapter } from \"./adapter.js\";\nimport {\n  findFlowFileInRoots,\n  FLOW_FILE_EXTENSIONS,\n  type FlowLookupMiss,\n  flowLookupRoots,\n  loadFlow,\n} from \"./engine/index.js\";\nimport { flowSkillVersionPins } from \"./engine/node-shape.js\";\nimport { SessionInlineSubFlowRunner } from \"./inline-sub-flow-host.js\";\nimport { SessionNodeExecutor } from \"./node-executor.js\";\nimport { driveOrchestratorTurn } from \"./orchestrator-turn.js\";\nimport { renderStimulusPrompt, type TurnStimulus } from \"./prompt-fragments.js\";\nimport { SessionSubpromptRunner } from \"./subprompt-runner.js\";\n\n/**\n * Lazy `import(\"@skaile/workspaces/runner\")` accessor. Cached on first call so\n * subsequent `runFlow` invocations don't re-evaluate the runner module.\n *\n * Dynamic ESM import is used (not `require`) so vitest and other ESM\n * bundlers honour their alias resolution — `require` would side-step the\n * configured aliases and pick up two distinct module instances when run\n * under vitest. The string-literal specifier ensures bun --compile keeps\n * the dependency (per the static-import-or-die rule in\n * connectors/CLAUDE.md).\n */\n// eslint-disable-next-line @typescript-eslint/no-explicit-any\nlet _runnerModule: any | undefined;\n// eslint-disable-next-line @typescript-eslint/no-explicit-any\nasync function loadRunnerModule(): Promise<any> {\n  if (_runnerModule) return _runnerModule;\n  _runnerModule = await import(\"@skaile/workspaces/runner\");\n  return _runnerModule;\n}\n\n/** Type-only re-export of SessionState so the runner tombstone shim still works. */\nexport type SessionState = import(\"@skaile/workspaces/runner\").SessionState;\n\n/** Maximum agent session duration (4 hours). Configurable via {@link RunOptions.sessionTimeoutMs}. */\nconst DEFAULT_SESSION_TIMEOUT_MS = 4 * 60 * 60 * 1000; // 4 hours\n\nconst FLOW_AGENT_OPERATION_NAMES = new Set([\n  \"get_available\",\n  \"get_state\",\n  \"get_globals\",\n  \"build_handoff\",\n  \"validate_node\",\n  \"start_node\",\n  \"request_approval\",\n  \"request_input\",\n  \"complete_node\",\n  \"skip_node\",\n  \"fail_node\",\n]);\n\n/**\n * Options for {@link runFlow}.\n *\n * Wraps `FlowOrchestrator` with autonomous mode turned on by default. First-class\n * gate nodes remain mandatory human decisions in every mode.\n *\n * @docLink packages/factory-assets/flow#run-flow\n */\nexport interface RunOptions {\n  /** The working directory for the project being orchestrated. */\n  projectDir: string;\n  /** Absolute path to the `.flow.yaml` or `.flow.json` definition file. */\n  flowPath: string;\n  /**\n   * Directory containing `agent.yaml`, `SOUL.md`, `RULES.md`, `knowledge/`.\n   * Resolved from `skaile.yaml` via `resolveAgentDir` when absent.\n   */\n  agentDir?: string;\n  /**\n   * Agent harness. Defaults to `settings.driver` (`\"omp\"` or `\"claude-sdk\"`).\n   */\n  driver?: string;\n  /**\n   */\n  /**\n   * Model name override. Falls back to `settings.model` when absent.\n   */\n  model?: string;\n  /**\n   * Path to a specific `settings.json` to load instead of the default\n   * layered resolution chain (project → parent → global → built-in defaults).\n   */\n  settingsFile?: string;\n  /**\n   * When `true`, prints the initial flow state without starting the agent\n   * and returns immediately.\n   */\n  dryRun?: boolean;\n  /**\n   * Per-session timeout in milliseconds. Defaults to\n   * {@link DEFAULT_SESSION_TIMEOUT_MS} (4 hours).\n   */\n  sessionTimeoutMs?: number;\n  /** Optional human-readable label shown in the session list. */\n  sessionLabel?: string;\n  /** Autonomous mode for CLI runs. Defaults to true; first-class gate nodes are never bypassed. */\n  autonomousMode?: boolean;\n  /**\n   * Called for each {@link AgentEvent} emitted during the run\n   * (e.g. `text`, `tool_call`, `state_changed`).\n   */\n  onEvent?: (event: AgentEvent) => void;\n  /**\n   * Called for each diagnostic log line. Defaults to `process.stdout`.\n   */\n  onLog?: (line: string) => void;\n}\n\n/**\n * Options for resuming an existing CLI session.\n *\n * Reconnects the driver's conversation thread (conversation history is\n * preserved via the stored `driverSessionId`) but restarts flow execution\n * from scratch — flow state is not persisted in CLI mode. For governed,\n * resumable flow runs use a host that persists flow state (e.g. the Skaile\n * platform).\n *\n * @docLink packages/factory-assets/flow#resume-flow\n */\nexport interface ResumeOptions {\n  /** The working directory for the project being orchestrated. */\n  projectDir: string;\n  /**\n   * Specific run ID to resume. When absent, the current session pointer\n   * at `<projectDir>/.skaile/current` is used.\n   */\n  sessionId?: string;\n  /**\n   * Agent definition directory override. Defaults to the directory stored\n   * in the session file.\n   */\n  agentDir?: string;\n  /**\n   * When `true`, prints the initial flow state without starting the agent\n   * and returns immediately.\n   */\n  dryRun?: boolean;\n  /**\n   * Per-session timeout in milliseconds. Defaults to\n   * {@link DEFAULT_SESSION_TIMEOUT_MS} (4 hours).\n   */\n  sessionTimeoutMs?: number;\n  /**\n   * Called for each {@link AgentEvent} emitted during the run.\n   */\n  onEvent?: RunOptions[\"onEvent\"];\n  /**\n   * Called for each diagnostic log line. Defaults to `process.stdout`.\n   */\n  onLog?: RunOptions[\"onLog\"];\n}\n\n// ---------------------------------------------------------------------------\n// Public API\n// ---------------------------------------------------------------------------\n\n/**\n * Start a new flow session from the CLI.\n *\n * Wraps `FlowOrchestrator` with autonomous mode turned on by default. The\n * runner remains idle between turns; first-class gates always park for a human\n * decision, including in autonomous mode. Non-CLI hosts (Skaile platform,\n * Pichi) use the orchestrator directly via the serve command surface and drive\n * gates through user actions.\n *\n * @docLink packages/factory-assets/flow#run-flow\n */\nexport async function runFlow(opts: RunOptions): Promise<void> {\n  const runner = await loadRunnerModule();\n  const {\n    bootstrapRunnerLogStore,\n    bootstrapCapabilityRegistry,\n    CapabilityRegistry,\n    createAgentSession,\n    createSessionStimulusBus,\n    defineCapability,\n    registerCompositionCapabilities,\n    resolveDriverPaths,\n    newSession,\n    saveSession,\n    touchSession,\n  } = runner;\n\n  const flow = loadFlow(opts.flowPath);\n  const agentDir = opts.agentDir ?? resolveAgentDir(opts.projectDir);\n  const settings = await resolveSettings(opts.projectDir, {\n    driver: opts.driver,\n    model: opts.model,\n  });\n\n  const session = newSession({\n    flowId: flow.id,\n    projectDir: opts.projectDir,\n    agentDir,\n    driver: settings.driver ?? \"omp\",\n    model: settings.model,\n    label: opts.sessionLabel,\n  });\n\n  await saveSession(opts.projectDir, session);\n\n  // Bootstrap structured logging — registers a process-singleton LogStore.\n  // OnLogBridgeSink mirrors entries to opts.onLog when caller provides one,\n  // preserving back-compat with CLI hosts that consume plain text lines.\n  const wsConfigEarly = resolveSkWorkspaceConfig(opts.projectDir);\n  const { dispose: disposeLogStore } = bootstrapRunnerLogStore({\n    sessionId: session.runId,\n    projectDir: opts.projectDir,\n    yamlBlock: wsConfigEarly.logging,\n    onLog: opts.onLog,\n  });\n  const flowLog = createLogger({\n    kind: \"flow-connector\",\n    subkind: \"run\",\n    instance: session.runId,\n  });\n  const log = (line: string) => flowLog.info(line);\n  const capabilityRegistry = new CapabilityRegistry();\n  bootstrapCapabilityRegistry(capabilityRegistry);\n  const capabilityHooks = {\n    sessionId: session.runId,\n    composeTools: () => capabilityRegistry.composeLLMTools(),\n    resolve: (name: string) =>\n      capabilityRegistry.list().find((cap: { name: string }) => cap.name === name) ?? null,\n    invoke: (name: string, input: unknown, _signal?: AbortSignal, callId?: string) =>\n      capabilityRegistry.invoke(name, input, { sessionId: session.runId, callId }),\n  };\n\n  try {\n    // ── Dry run ────────────────────────────────────────────────────────────\n    if (opts.dryRun) {\n      const adapter = new FlowAdapter();\n      const handle = await adapter.connect(\n        {\n          id: \"flow\",\n          driver: \"flow\",\n          access: \"read-only\" as const,\n          options: { flow, seed: { runId: session.runId, startedBy: \"cli\" } },\n        },\n        {}, // flow needs no connect context\n      );\n      const state = adapter.getExecution(handle);\n      const available = Object.values(state.nodes)\n        .filter((n) => n.status === \"available\")\n        .map((n) => n.id);\n      log(`[dry-run] Flow: ${flow.name} (${flow.id})`);\n      log(`[dry-run] Available: ${available.join(\", \") || \"(none)\"}`);\n      await adapter.disconnect(handle);\n      return;\n    }\n\n    await validatePinnedVersions(flow, opts.projectDir, log);\n\n    // ── Telemetry initialization ────────────────────────────────────────────\n    const wsConfig = wsConfigEarly;\n    const telemetry = await initTelemetry(wsConfig.telemetry);\n    const flowTrace = telemetry.startTrace({\n      name: `flow:${flow.id}`,\n      kind: \"flow_run\",\n      attributes: {\n        \"skaile.flow.id\": flow.id,\n        \"skaile.flow.run_id\": session.runId,\n      },\n    });\n\n    // ── Agent session setup ─────────────────────────────────────────────────\n    const driverPaths = resolveDriverPaths(settings);\n    const agentSession = await createAgentSession({\n      projectDir: opts.projectDir,\n      agentDir: session.agentDir,\n      driver: session.driver,\n      model: session.model,\n      resumeSessionId: session.driverSessionId,\n      projectClaudeMd: path.join(opts.projectDir, \"CLAUDE.md\"),\n      promptsDir: path.join(opts.projectDir, driverPaths.promptsDir),\n      sessionId: session.runId,\n      onLog: log,\n      telemetry,\n      trace: flowTrace,\n      wsConfig,\n      capabilities: capabilityHooks,\n      capabilityRegistry,\n    });\n    if (agentSession.composition?.discoverableEntries.length) {\n      registerCompositionCapabilities(\n        capabilityRegistry,\n        agentSession.composition.discoverableEntries,\n      );\n    }\n    const { driver } = agentSession;\n    const nodeExecutor = new SessionNodeExecutor({ workspaceDir: opts.projectDir });\n    // Same endpoints and credentials the session driver used: the registry\n    // and the credential env `createAgentSession` already resolved — not a\n    // new resolution, not a new secret channel.\n    const subpromptRunner = new SessionSubpromptRunner({\n      driverType: agentSession.driverType,\n      sessionModel: agentSession.model,\n      workspaceDir: opts.projectDir,\n      registry: agentSession.registry,\n      credentialEnv: agentSession.credentialEnv,\n      ...(agentSession.modelRef ? { modelRef: agentSession.modelRef } : {}),\n    });\n    let driverStarted = false;\n    const updatedSession = { ...session };\n\n    // Track driver session ID so future resumes can reconnect the SDK thread.\n    driver.on(\"agent-event\", () => {\n      const runtimeSessionId = driver.runtimeSessionId;\n      if (!runtimeSessionId || runtimeSessionId === updatedSession.driverSessionId) return;\n      updatedSession.driverSessionId = runtimeSessionId;\n      void saveSession(opts.projectDir, updatedSession).catch(() => {});\n    });\n\n    // ── FlowAdapter + stimulus bus ─────────────────────────────────────────\n    //\n    // Phase 4 of the flow-connector extraction: SessionStimulusBus is the sole\n    // turn driver. The legacy FlowOrchestrator + onStateChange subscription\n    // are gone — every turn is initiated either by the bus (after an adapter\n    // mutation observed via `useBusForStimulus: true`) or by an explicit\n    // `bus.signal()` call from this function (the initial flow_started turn).\n    //\n    // The bus's `driveTurn` callback receives the stimulus paragraph the\n    // adapter rendered (not the full orchestrator prompt). It hands the turn to\n    // `driveOrchestratorTurn`, which rebuilds the five-section prompt so the\n    // agent sees the same flow context the legacy orchestrator produced — and\n    // announces it, so a CLI consumer's `onEvent` stream carries the prompt too.\n    const flowConnectorId = \"flow\";\n    const turnTimeoutMs = opts.sessionTimeoutMs ?? DEFAULT_SESSION_TIMEOUT_MS;\n\n    const ensureDriverStarted = async (): Promise<void> => {\n      if (driverStarted) return;\n      await driver.start();\n      driverStarted = true;\n    };\n\n    // Same widening the `state_changed` forwarder below performs: `onEvent` is\n    // typed against the bridge's driver-level union, which has no case for a\n    // runtime-level event.\n    const emitFlowPrompt = (event: FlowPromptEvent): void => {\n      opts.onEvent?.(event as unknown as AgentEvent);\n    };\n\n    const inlineSubFlowRunner = new SessionInlineSubFlowRunner({\n      resolveFlow: (flowId) => loadFlow(resolveFlowPath(flowId, opts.projectDir)),\n      nodeExecutor,\n      subpromptRunner,\n      driveAgentTurn: async ({ flow: childFlow, execution, stimulus }) => {\n        await ensureDriverStarted();\n        await driveOrchestratorTurn({\n          flow: childFlow,\n          execution,\n          stimulus,\n          emit: emitFlowPrompt,\n          deliver: (prompt) => awaitAgentEnd(driver, prompt, opts.onEvent, turnTimeoutMs),\n        });\n      },\n    });\n\n    // Forward declaration so `driveTurn` can read the live execution\n    // snapshot. Assigned just below, before the bus can fire.\n    let flowAdapterRef: FlowAdapter | null = null;\n    let flowHandleRef: import(\"@skaile/workspaces/connectors\").ConnectorHandle | null = null;\n\n    const stimulusBus = createSessionStimulusBus({\n      driveTurn: async (\n        promptFragment: string,\n        metas: Array<Record<string, unknown>>,\n      ): Promise<void> => {\n        // The adapter signal carries `meta.kind` per stimulus. Use that to\n        // reconstruct the typed `TurnStimulus`; for compound batches, fall\n        // back to `state_changed` (the union element that means \"look at\n        // current state and continue\").\n        const lastKind = metas[metas.length - 1]?.kind;\n        let stimulus: TurnStimulus;\n        if (lastKind === \"flow_started\") {\n          stimulus = { kind: \"flow_started\" };\n        } else if (\n          lastKind === \"user_message\" &&\n          typeof metas[metas.length - 1]?.text === \"string\"\n        ) {\n          const meta = metas[metas.length - 1] as Record<string, unknown>;\n          stimulus = {\n            kind: \"user_message\",\n            text: String(meta.text ?? \"\"),\n            senderId: String(meta.senderId ?? \"user\"),\n          };\n        } else {\n          stimulus = { kind: \"state_changed\" };\n        }\n        // The fragment passed in by the bus is the adapter's\n        // `renderStimulusPrompt(stim)` joined across coalesced signals. It is\n        // discarded in favour of the structured stimulus, which\n        // `driveOrchestratorTurn` rebuilds the full prompt from; that keeps the\n        // prompt shape stable and the structured form already contains\n        // everything the fragment encoded.\n        void promptFragment;\n        if (!flowAdapterRef || !flowHandleRef) {\n          throw new Error(\"driveTurn fired before FlowAdapter was wired\");\n        }\n        await flowAdapterRef.drainRuntimeNodes(flowHandleRef);\n        const execution = flowAdapterRef.getExecution(flowHandleRef);\n        if (execution.done || execution.status === \"failed\" || execution.status === \"cancelled\") {\n          return;\n        }\n        if (!flowAdapterRef.shouldDriveAgentTurn(flowHandleRef, stimulus)) return;\n        await ensureDriverStarted();\n        await driveOrchestratorTurn({\n          flow,\n          execution,\n          stimulus,\n          emit: emitFlowPrompt,\n          deliver: (prompt) => awaitAgentEnd(driver, prompt, opts.onEvent, turnTimeoutMs),\n        });\n      },\n      log: flowLog,\n    });\n\n    const flowAdapter = new FlowAdapter();\n    const flowHandle = await flowAdapter.connect(\n      {\n        id: flowConnectorId,\n        driver: \"flow\",\n        access: \"read-write\" as const,\n        options: {\n          flow,\n          seed: {\n            runId: session.runId,\n            startedBy: \"cli\",\n            autonomousMode: opts.autonomousMode ?? true,\n          },\n          stimulusBus,\n          useBusForStimulus: true,\n          nodeExecutor,\n          subpromptRunner,\n          inlineSubFlowRunner,\n        },\n      },\n      {}, // flow needs no connect context\n    );\n    flowAdapterRef = flowAdapter;\n    flowHandleRef = flowHandle;\n\n    // Flow operations retain the connector's published bare protocol names;\n    // this is the intentional exception to generic capability namespaces.\n    for (const operation of flowAdapter.tools\n      .describeOperations(flowHandle)\n      .filter(({ name }) => FLOW_AGENT_OPERATION_NAMES.has(name))) {\n      const shape: Record<string, z.ZodType> = {};\n      for (const arg of operation.args) {\n        let schema: z.ZodType;\n        switch (arg.type) {\n          case \"boolean\":\n            schema = z.boolean();\n            break;\n          case \"number\":\n            schema = z.number();\n            break;\n          case \"json\":\n            schema = z.json();\n            break;\n          default:\n            schema = z.string();\n        }\n        shape[arg.name] = arg.required ? schema : schema.optional();\n      }\n      capabilityRegistry.register(\n        defineCapability({\n          name: operation.name,\n          displayName: operation.name,\n          description: operation.description,\n          input: z.object(shape),\n          side: \"agent\",\n          origin: { kind: \"flow\", flowId: flow.id },\n          scope: \"session\",\n          audience: [\"llm\"],\n          kind: operation.accessLevel === \"read\" ? \"query\" : \"effect\",\n          handler: async (args: Record<string, unknown>) =>\n            flowAdapter.executeOp(flowHandle, operation.name, args),\n        }),\n        \"agent\",\n      );\n    }\n\n    // Forward state_changed events to the caller. The bus computes a\n    // turn-kicking stimulus on each adapter mutation; the host-facing\n    // event stream still observes the full snapshot via onChange.\n    flowAdapter.onStateChange(flowHandle, (state: FlowExecution) => {\n      opts.onEvent?.({\n        type: \"state_changed\",\n        store: `flow:${state.runId}`,\n        state: state as unknown as Record<string, unknown>,\n      } as unknown as AgentEvent);\n    });\n\n    // ── Execute ────────────────────────────────────────────────────────────\n    flowLog.info(\"starting flow\", {\n      flowId: flow.id,\n      flowName: flow.name,\n      runId: session.runId,\n    });\n\n    try {\n      // Kick the initial flow_started turn explicitly. Subsequent turns are\n      // driven by the bus signaling whenever the adapter mutates.\n      const initialStimulus: TurnStimulus = { kind: \"flow_started\" };\n      await stimulusBus.signal(flowConnectorId, {\n        promptFragment: renderStimulusPrompt(initialStimulus),\n        meta: { kind: initialStimulus.kind },\n      });\n\n      const finalState = flowAdapter.getExecution(flowHandle);\n      if (finalState.done) {\n        flowLog.info(\"flow complete\", { flowId: flow.id, flowName: flow.name });\n      } else if (finalState.status === \"failed\") {\n        flowLog.error(\"flow failed\", undefined, { flowId: flow.id, flowName: flow.name });\n      } else {\n        flowLog.warn(\"flow paused awaiting further stimulus\", {\n          flowId: flow.id,\n          status: finalState.status,\n          note: \"CLI mode does not supply human approval/input decisions\",\n        });\n      }\n    } finally {\n      driver.kill();\n      const lastState = flowAdapter.getExecution(flowHandle);\n      await saveSession(\n        opts.projectDir,\n        touchSession({\n          ...updatedSession,\n          driverSessionId: driver.runtimeSessionId ?? updatedSession.driverSessionId,\n          status: lastState.status === \"complete\" ? \"complete\" : \"paused\",\n        }),\n      ).catch(() => {});\n      await flowAdapter.disconnect(flowHandle).catch(() => {});\n      await agentSession.dispose();\n      telemetry.endTrace(flowTrace, {\n        status: flowAdapter.getExecution(flowHandle).status === \"complete\" ? \"ok\" : \"error\",\n      });\n      await telemetry.flush().catch(() => {});\n    }\n  } finally {\n    disposeLogStore();\n  }\n}\n\n/**\n * Resume an existing session from the CLI.\n *\n * With the Phase 2 turn-based model, flow state is NOT persisted to\n * local session files — only the driver session ID is kept. The CLI\n * can resume the agent's conversation thread, but the flow execution\n * itself starts from scratch because the runner has no durable store\n * for per-run state.\n *\n * For a governed, resumable flow run, use a host that persists flow\n * state (e.g. the Skaile platform). CLI resume is retained as a\n * driver-level convenience only: we load the session, restart the\n * flow, and the SDK will reconnect to the prior conversation thread.\n *\n * @docLink packages/factory-assets/flow#resume-flow\n */\nexport async function resumeFlow(opts: ResumeOptions): Promise<void> {\n  const runner = await loadRunnerModule();\n  const { loadSession, loadSessionById, bootstrapRunnerLogStore } = runner;\n\n  const session = opts.sessionId\n    ? await loadSessionById(opts.projectDir, opts.sessionId)\n    : await loadSession(opts.projectDir);\n\n  if (!session) {\n    const hint = opts.sessionId\n      ? `session ${opts.sessionId}`\n      : `current session in ${opts.projectDir}/.skaile`;\n    throw new Error(`No session found (${hint}) — run 'start' first`);\n  }\n\n  const flowPath = resolveFlowPath(session.flowId, opts.projectDir);\n\n  // Bootstrap a transient logger for the resume diagnostics. The inner\n  // runFlow() call will register its own LogStore for the new run. Keep\n  // OnLogBridgeSink wiring so callers passing onLog still see this line.\n  const wsConfigEarly = resolveSkWorkspaceConfig(opts.projectDir);\n  const { dispose: disposeLogStore } = bootstrapRunnerLogStore({\n    sessionId: session.runId,\n    projectDir: opts.projectDir,\n    yamlBlock: wsConfigEarly.logging,\n    onLog: opts.onLog,\n  });\n  const flowLog = createLogger({\n    kind: \"flow-connector\",\n    subkind: \"run\",\n    instance: session.runId,\n  });\n  flowLog.info(\"resuming session\", {\n    runId: session.runId,\n    flowId: session.flowId,\n    note: \"CLI mode does not persist flow state — flow restarts from scratch; driver thread resumes\",\n  });\n\n  try {\n    await runFlow({\n      projectDir: opts.projectDir,\n      flowPath,\n      agentDir: opts.agentDir ?? session.agentDir,\n      driver: session.driver,\n      model: session.model,\n      sessionLabel: session.label,\n      dryRun: opts.dryRun,\n      sessionTimeoutMs: opts.sessionTimeoutMs,\n      onEvent: opts.onEvent,\n      onLog: opts.onLog,\n    });\n  } finally {\n    disposeLogStore();\n  }\n}\n\n// ---------------------------------------------------------------------------\n// Helpers\n// ---------------------------------------------------------------------------\n\nasync function validatePinnedVersions(\n  flow: Awaited<ReturnType<typeof loadFlow>>,\n  projectDir: string,\n  log: (line: string) => void,\n): Promise<void> {\n  const pinnedNodes = flowSkillVersionPins(flow);\n  if (pinnedNodes.length === 0) return;\n\n  const skillVersions = new Map<string, string>();\n  const aiResourcesDir = findAiResourcesDir(projectDir);\n  if (aiResourcesDir) {\n    for (const node of pinnedNodes) {\n      const skillId = node.skillId;\n      if (skillVersions.has(skillId)) continue;\n      const skillPath = findSkillMd(aiResourcesDir, skillId);\n      if (skillPath) {\n        const content = fs.readFileSync(skillPath, \"utf-8\");\n        const fm = parseSkillFrontmatter(content);\n        skillVersions.set(skillId, fm.metadata?.version ?? fm.version ?? \"\");\n      }\n    }\n  }\n\n  const checks = validateFlowVersions(pinnedNodes, skillVersions);\n  const failures = checks.filter((c) => !c.satisfied);\n  if (failures.length > 0) {\n    const lines = failures.map(\n      (f) => `  ${f.nodeId}: wants ${f.requested}, found ${f.actual || \"(none)\"}`,\n    );\n    throw new Error(`Skill version mismatch:\\n${lines.join(\"\\n\")}`);\n  }\n  for (const c of checks.filter((c) => c.satisfied)) {\n    log(`  Version OK: ${c.skillId} ${c.actual} satisfies ${c.requested}`);\n  }\n}\n\n/**\n * Assert `found` sits inside one of `roots`.\n *\n * A backstop, not the primary control: `isValidAssetName` already rejects every\n * id containing a separator, and `findFlowFileInRoots` skips any candidate that\n * escapes its search dir. So on today's code this cannot fire — it is here to\n * fail loudly rather than silently if a future lookup stops enforcing\n * containment itself. Widening the accepted extensions must never widen which\n * paths are reachable, and this is the line that keeps that honest.\n */\nfunction assertContainedInAnyRoot(found: string, roots: string[], flowId: string): void {\n  const resolved = path.resolve(found);\n  const inside = roots.some((root) => {\n    const relative = path.relative(path.resolve(root), resolved);\n    return !relative.startsWith(\"..\") && !path.isAbsolute(relative);\n  });\n  if (!inside) {\n    throw new Error(`Flow path escapes its lookup root: ${JSON.stringify(flowId)}`);\n  }\n}\n\n/** One line per near-miss: a file that is right there but was still rejected. */\nfunction describeMisses(misses: FlowLookupMiss[], heading: string): string {\n  const seen = new Set<string>();\n  const lines: string[] = [];\n  for (const miss of misses) {\n    if (seen.has(miss.path)) continue;\n    seen.add(miss.path);\n    lines.push(\n      miss.reason === \"id-mismatch\"\n        ? `  ${miss.path}: declares id ${JSON.stringify(miss.declaredId ?? \"\")}`\n        : `  ${miss.path}: could not be parsed (${miss.error ?? \"unknown error\"})`,\n    );\n  }\n  return lines.length > 0 ? `\\n${heading}\\n${lines.join(\"\\n\")}` : \"\";\n}\n\n/**\n * Resolve one flow identity through the CLI/serve host's normal lookup order —\n * the same roots and filenames `skaile run` and `flow list` use, via\n * {@link flowLookupRoots} / {@link findFlowFileInRoots}. Resolution is by the\n * **declared** `id`, not by filename.\n *\n * @throws {Error} When `flowId` is not a canonical asset name, when no file\n *   declares it, or when a match somehow resolves outside every lookup root.\n */\nexport function resolveFlowPath(flowId: string, projectDir: string): string {\n  // Sub-flow targets and resumed session records are the two callers, so an\n  // identity that is not canonical is a bug in the caller, not a missing file.\n  if (!isValidAssetName(flowId)) {\n    throw new Error(`Invalid canonical flow identity: ${JSON.stringify(flowId)}`);\n  }\n\n  const roots = flowLookupRoots(projectDir);\n  const misses: FlowLookupMiss[] = [];\n  const found = findFlowFileInRoots(flowId, roots, { onMiss: (m) => misses.push(m) });\n  if (found) {\n    assertContainedInAnyRoot(found, roots, flowId);\n    return found;\n  }\n\n  // A file that is present but unparseable is a different problem from a missing\n  // one, and \"not found\" is the wrong headline for it — that exact misdirection\n  // is what this change exists to remove, so don't reintroduce it here.\n  if (misses.length > 0 && misses.every((m) => m.reason === \"unparseable\")) {\n    throw new Error(\n      `Flow ${flowId} was found but could not be loaded.` + describeMisses(misses, \"Candidates:\"),\n    );\n  }\n\n  const shown = roots.slice(0, 3).join(\", \");\n  const more = roots.length > 3 ? \", …\" : \"\";\n  // Spelled from FLOW_FILE_EXTENSIONS so the message cannot drift from the\n  // candidate list the lookup actually probes.\n  const accepted = FLOW_FILE_EXTENSIONS.map((ext) => `${flowId}${ext}`).join(\" | \");\n  throw new Error(\n    `Flow not found: ${flowId}. Searched ${roots.length} root(s) (${shown || \"none\"}${more}) ` +\n      `for ${accepted} — flat, or inside a ${flowId}/ directory.` +\n      describeMisses(misses, \"Near misses:\"),\n  );\n}\n\n/** Walk up from projectDir to find ai-assets/ */\nfunction findAiResourcesDir(projectDir: string): string | null {\n  let dir = projectDir;\n  for (let i = 0; i < 6; i++) {\n    const candidate = path.join(dir, \"ai-assets\");\n    if (fs.existsSync(candidate)) return candidate;\n    const parent = path.dirname(dir);\n    if (parent === dir) break;\n    dir = parent;\n  }\n  return null;\n}\n\n/** Find SKILL.md for a given skill ID in any `skills/` directory under ai-assets */\nfunction findSkillMd(aiResourcesDir: string, skillId: string): string | null {\n  for (const skillsDir of findKindDirs(aiResourcesDir, \"skills\")) {\n    const found = walkForSkill(skillsDir, skillId);\n    if (found) return found;\n  }\n  return null;\n}\n\n// ---------------------------------------------------------------------------\n// Turn-wait helper\n// ---------------------------------------------------------------------------\n\n/**\n * Minimal driver surface needed by the bus's `driveTurn` callback. Mirrors\n * the slice the legacy `FlowOrchestrator` consumed (`prompt` + `on` +\n * `removeAllListeners`) so we can keep the wait helper private to this\n * module without pulling in a runtime dep on `@skaile/workspaces/bridge`.\n */\ninterface TurnDriverSurface {\n  prompt(message: string): Promise<void>;\n  on(event: \"agent-event\", handler: (event: AgentEvent) => void): void;\n  removeAllListeners(event: \"agent-event\"): void;\n}\n\n/**\n * Send a prompt to the driver and resolve when the agent emits\n * `agent_end` (or reject on an `error` that is not an in-place retry).\n * Identical contract to the legacy `awaitAgentEnd` helper from\n * `flow-orchestrator.ts`. Phase 4 lifts the helper into `run-flow.ts` because\n * the bus now owns turn driving. Exported for tests only.\n */\nexport function awaitAgentEnd(\n  driver: TurnDriverSurface,\n  prompt: string,\n  onEvent: ((event: AgentEvent) => void) | undefined,\n  timeoutMs: number,\n): Promise<void> {\n  return new Promise<void>((resolve, reject) => {\n    let settled = false;\n\n    const done = (err?: Error) => {\n      if (settled) return;\n      settled = true;\n      clearTimeout(timer);\n      driver.removeAllListeners(\"agent-event\");\n      if (err) reject(err);\n      else resolve();\n    };\n\n    const timer = setTimeout(\n      () => done(new Error(`Flow turn timed out after ${timeoutMs / 1000}s`)),\n      timeoutMs,\n    );\n\n    driver.on(\"agent-event\", (event: AgentEvent) => {\n      onEvent?.(event);\n      if (event.type === \"agent_end\") done();\n      // An in-place retry replays this same turn; its own end settles it.\n      else if (event.type === \"error\" && event.retrying !== true) {\n        const msg =\n          (event as { error?: string; message?: string }).error ??\n          (event as { message?: string }).message ??\n          \"Agent error\";\n        done(new Error(msg));\n      }\n    });\n\n    driver.prompt(prompt).catch(done);\n  });\n}\n\nfunction walkForSkill(dir: string, skillId: string): string | null {\n  for (const entry of fs.readdirSync(dir, { withFileTypes: true })) {\n    if (!entry.isDirectory()) continue;\n    const full = path.join(dir, entry.name);\n    const skillMd = path.join(full, \"SKILL.md\");\n    if (fs.existsSync(skillMd)) {\n      if (entry.name === skillId) return skillMd;\n    } else {\n      const found = walkForSkill(full, skillId);\n      if (found) return found;\n    }\n  }\n  return null;\n}\n"]}

package/dist/{chunk-55RMUF4G.js → chunk-57DVX53V.js}

@@ -4,7 +4,7 @@ import { findAiAssetsRoot } from './chunk-TYUJB336.js';
 import { WebSocketServerTransport } from './chunk-5LKOAX7I.js';
 import { assembleSystemPrompt, buildCapabilitiesPromptSection } from './chunk-W3UDISS2.js';
 import { prepareNativePolicy, codexInstanceEnvironment, parseCodexCredential, parseCodexRefreshInput, parseCodexRefreshResult } from './chunk-HCYS7GFP.js';
-import { resolveFlowPath } from './chunk-G4T7MYTA.js';
+import { resolveFlowPath } from './chunk-2EOPGGLY.js';
 import { findAiAssetsRoot as findAiAssetsRoot$1, deployCatalogEntry, undeployCatalogEntry } from './chunk-VDJKWKH2.js';
 import { ConnectFailureCarryOver, registerBuiltinConnectors, buildConnectorPromptSection, findMissingPackages, installNpmPackages, ConnectorManager, buildSdkConnectorTools, buildLazySdkFlowTools, describeFlowOperations, buildConnectorToolDefs, buildFlowToolDefs, SessionNodeExecutor, SessionSubpromptRunner, ClassifierSubpromptRunner, SessionInlineSubFlowRunner, driveOrchestratorTurn, buildSdkFlowTools } from './chunk-QFZFZXQW.js';
 import { loadYamlConnectorDeclarations, withMaterializedConnectorDeclarations, SecretProviderChain, ConnectorStartupError, isKnownSecretRef, EnvSecretProvider, PreMintedSecretProvider, InMemorySecretProvider, resolvedConfigToDeclarations, deriveSingleMaterializedConnectorDeclaration } from './chunk-WKIOWDLQ.js';
@@ -1828,13 +1828,14 @@ var RESERVED_MCP_SERVER_IDS = /* @__PURE__ */ new Set([
   "skaile-workspace",
   "skaile-capabilities"
 ]);
-async function resolveExternalMcpDeclarations(projectDir, sessionId, managedCodex = false) {
+async function resolveExternalMcpDeclarations(projectDir, sessionId, managedCodex = false, loadedIds) {
   const mcpLog = createLogger({
     kind: "mcp",
     subkind: "wiring",
     instance: sessionId ?? "no-session"
   });
   const mcpDeclarations = await loadMcpServerDeclarations(projectDir);
+  for (const decl of mcpDeclarations) loadedIds?.add(decl.id);
   if (managedCodex && mcpDeclarations.length > 0)
     throw new Error("CODEX_MANAGED_PROJECT_MCP_UNSUPPORTED");
   mcpLog.debug("loaded MCP declarations", { count: mcpDeclarations.length });
@@ -1867,6 +1868,10 @@ async function resolveExternalMcpDeclarations(projectDir, sessionId, managedCode
     env: substituteWorkspaceTokenMap(decl.env, projectDir)
   }));
 }
+async function findUnknownMcpDeclarationIds(projectDir, known) {
+  const declared = await loadMcpServerDeclarations(projectDir);
+  return declared.map((decl) => decl.id).filter((id) => !RESERVED_MCP_SERVER_IDS.has(id) && !known.has(id));
+}
 async function resolveRecipeDeclaration(decl, nixFlakeRef, recipeCache) {
   const recipe = decl.recipe;
   const recipeLogKey = recipe.flake ? { flake: recipe.flake } : { attr: recipe.attr };
@@ -2345,7 +2350,8 @@ async function buildAgentResources(projectDir, driverType, _onLog, watch, secret
       throw new Error("external MCP manager unavailable \u2014 no capability registry (CLI/flow mode)");
     },
     getExternalMcpManager: () => null,
-    mcpPromptSection: ""
+    mcpPromptSection: "",
+    unloadedMcpDeclarationIds: async () => []
   };
   try {
     registerBuiltinConnectors();
@@ -2388,6 +2394,7 @@ async function buildAgentResources(projectDir, driverType, _onLog, watch, secret
     let workspacePluginToShutdown = null;
     let externalMcpManager = null;
     let externalMcpDeclarations;
+    const loadedMcpIds = /* @__PURE__ */ new Set();
     const mcpSecretChain = preMintedSecrets ? new SecretProviderChain(
       [preMintedSecrets, secretProvider].filter(
         Boolean
@@ -2420,9 +2427,15 @@ async function buildAgentResources(projectDir, driverType, _onLog, watch, secret
     }
     if (capabilityRegistry) {
       externalMcpDeclarations = mergeExtraMcpDeclarations(
-        managedProjectMcp ?? await resolveExternalMcpDeclarations(projectDir, sessionMeta?.sessionId),
+        managedProjectMcp ?? await resolveExternalMcpDeclarations(
+          projectDir,
+          sessionMeta?.sessionId,
+          false,
+          loadedMcpIds
+        ),
         extraMcpDeclarations
       );
+      for (const decl of externalMcpDeclarations) loadedMcpIds.add(decl.id);
       externalMcpManager = await startExternalMcpServers(
         capabilityRegistry,
         externalMcpDeclarations,
@@ -2499,7 +2512,13 @@ async function buildAgentResources(projectDir, driverType, _onLog, watch, secret
       startWatching,
       getOrCreateExternalMcpManager,
       getExternalMcpManager: () => externalMcpManager,
-      mcpPromptSection
+      mcpPromptSection,
+      unloadedMcpDeclarationIds: async () => {
+        if (!capabilityRegistry || sessionMeta?.managedCodex) return [];
+        const known = new Set(loadedMcpIds);
+        for (const server of externalMcpManager?.listServers() ?? []) known.add(server.id);
+        return findUnknownMcpDeclarationIds(projectDir, known);
+      }
     };
   } catch {
     return noopResult;
@@ -2759,7 +2778,8 @@ async function createAgentSession(config) {
     startWatching,
     getOrCreateExternalMcpManager,
     getExternalMcpManager,
-    mcpPromptSection
+    mcpPromptSection,
+    unloadedMcpDeclarationIds
   } = await buildAgentResources(
     projectDir,
     driverType,
@@ -2895,6 +2915,8 @@ async function createAgentSession(config) {
     startWatching,
     getOrCreateExternalMcpManager,
     getExternalMcpManager,
+    unloadedMcpDeclarationIds,
+    resumeSessionId,
     telemetry,
     systemPromptSections
   };
@@ -6519,6 +6541,28 @@ function rewriteFileChangedPath(event, cwd, mounts) {
   return event;
 }
 
+// runner/src/late-mcp-rebuild.ts
+async function rebuildForLateMcpDeclarations(deps) {
+  if (deps.driverStarted()) return false;
+  let late;
+  try {
+    late = await deps.unloadedMcpDeclarationIds();
+  } catch (err) {
+    deps.warn(
+      `[serve] late MCP declaration check failed (non-fatal): ${err instanceof Error ? err.message : String(err)}`
+    );
+    return false;
+  }
+  if (late.length === 0) return false;
+  return deps.recreate(() => {
+    if (deps.driverStarted()) return null;
+    deps.log(
+      `[serve] rebuilding the session before the first turn for MCP server(s) declared after the build: ${late.join(", ")}`
+    );
+    return { resumeSessionId: deps.resumeSessionId() };
+  });
+}
+
 // runner/src/process-safety-net.ts
 var BROKEN_PIPE_EXIT_CODE = 141;
 function resolveOptions(opts) {
@@ -11231,6 +11275,21 @@ async function startAgentServer(opts) {
     await driverSwapGate.awaitSwap();
     if (!await awaitCompactionIdle("prompt")) return;
     await restageMaterializedSkills(true);
+    try {
+      await rebuildForLateMcpDeclarations({
+        driverStarted: () => driverStarted,
+        unloadedMcpDeclarationIds: () => agentSession.unloadedMcpDeclarationIds(),
+        resumeSessionId: () => agentSession.resumeSessionId,
+        recreate: (overrides) => recreateAgentSession(overrides),
+        log,
+        warn: (line) => serverLog.warn(line)
+      });
+    } catch (err) {
+      const errMsg = err instanceof Error ? err.message : String(err);
+      serverLog.warn(`[serve] session rebuild for late MCP servers failed: ${errMsg}`);
+      sendEvent({ type: "error", message: `Session rebuild failed: ${errMsg}`, fatal: true });
+      return;
+    }
     const activeFlow = pickChatFlowTarget(activeFlows.values());
     if (activeFlow) {
       leaveQueue();
@@ -11936,5 +11995,5 @@ function touchSession(state) {
 }
 
 export { CLAUDE_CODE_CREDENTIALS_KEY, COMPILE_MANIFEST_FILENAME, CONNECTOR_MUTATE_NOT_READY, CapabilityRegistry, DEFAULT_CAPABILITY_CALL_TIMEOUT_MS, DEFAULT_COALESCE_MS, DEFAULT_FLOW_MUTATE_CONNECTOR_WAIT_MS, MOUNT_LIST_MAX_DEPTH, MOUNT_LIST_MAX_ENTRIES, MOUNT_READ_DEADLINE_FACTOR, MOUNT_READ_MAX_CHUNK_BYTES, MOUNT_STAT_BUDGET_MS, MOUNT_STAT_MAX_ENTRIES, MOUNT_TREE_OP_DEADLINE_FACTOR, MOUNT_WRITE_MAX_CHUNK_BYTES, MarkdownStreamer, PreInitRingSink, ResourceOperationError, SESSION_ROOT_WRITABLE_DIRS, SESSION_ROOT_WRITABLE_FILES, WRITE_RANGE_PARTIAL_TTL_MS, WS_AUTH_TOKEN_ENV, WS_AUTH_TOKEN_FILE_ENV, agentDefinitionExists, bootstrapCapabilityRegistry, bootstrapRunnerLogStore, buildAgentResources, buildClientCapabilityHandler, buildConnectorTokenMediator, buildContextSection, buildEnvironmentSection, buildResourcesAvailablePayload, buildStoreSnapshotReplay, builtinCapabilities, capabilityLogInstance, capabilitySignatureInputs, clearPreInitRingSink, clearSession, compileComposition, computeCapabilitySignature, computeDirectoryTotals, connectorRefreshKind, createAgentSession, createFlowConnectorReadiness, createManagedCodexSubpromptDriver, createSessionStimulusBus, defineCapability, deleteSession, dispatchResourceRequest, dispatchRunnerCapabilityInvocation, driverActiveAfterTurnEnd, emitSystemPromptComposed, ensureClaudeSettingsDisablesConnectors, ensureGitConfigInclude, executeConnectorMutate, extractClaudeAiOauthExpiresAt, flowRunDrivesTurns, flowStartNeedsDriverRestart, getPreInitRingSink, handleMountResourceRequest, handleResourceRequest, handleSessionRootResourceRequest, hasNonTerminalFlow, hostOpResumeStimulus, installPreInitRingSink, isSessionRootPathAllowed, isTerminalFlowStatus, listSessions, loadAgentManifest, loadCompileManifest, loadCompileManifestFromDir, loadManagedCodexHostConfig, loadSession, loadSessionById, mcpAuthSecretKey, newSession, nulTailPaddingLength, pickChatFlowTarget, pickFlowToolTarget, pickRepointedManager, planFlowMutate, prepareCodexTools, reconcilePendingDecisions, reconnectedRunNeedsAgentTurn, recreateKeepingLiveFlows, registerActiveFlow, registerCompositionCapabilities, rejectCapabilityOnApprovalDeny, rejectPendingCapabilityCallsOnDisconnect, resetRunnerLogStore, resolveAgentComposition, resolveAgentMixins, resolveBinding, resolveCapabilityCallTimeoutMs, resolveCapabilityResult, resolveComposition, resolveFlowMutateConnectorWaitMs, resolveMixin, restoredRunHasWorkToResume, runAgentChat, saveSession, setCurrentSession, setUpFlowConnector, startAgentServer, stimulusFromMetas, supportsLiveToolUpdates, takeRunnerWsAuthToken, toActiveFlowTarget, touchSession, validateInputResponse, writeClaudeCodeCredentialsFile, writeRangeChunk, writeRangePartialPath };
-//# sourceMappingURL=chunk-55RMUF4G.js.map
-//# sourceMappingURL=chunk-55RMUF4G.js.map
+//# sourceMappingURL=chunk-57DVX53V.js.map
+//# sourceMappingURL=chunk-57DVX53V.js.map