@skaile/workspaces 0.29.0 → 0.30.1

package/dist/chunk-VGFYUD3T.js.map

@@ -0,0 +1 @@
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checkRepoStatus,\n  applyPatch as coreApplyPatch,\n  deployedBase,\n  deployedDir,\n  ensureRepo,\n  extractForPatch,\n  factoryAssetRoots,\n  generatePatch,\n  getGlobalCacheDir,\n  getRepoCommit,\n  isDeployed,\n  parseAssetRef,\n  readLinks,\n  readLock,\n  resolveAll,\n  resolveAsset,\n  resolveRuntimeAssets,\n  resolveSkWorkspaceConfig,\n  savePatch,\n  scanRepo,\n  verifyLock,\n  writeLock,\n} from \"@skaile/workspaces/core\";\nimport { parse as parseYaml, stringify as stringifyYaml } from \"yaml\";\nimport { commitChanges } from \"./contrib.js\";\nimport type { HistoryEntry } from \"./history.js\";\nimport { appendHistory, clearHistory, getRecentHistory } from \"./history.js\";\nimport type { DeployOptions } from \"./installer.js\";\nimport { createScaffold, deployAll, removeAsset } from \"./installer.js\";\n\n/** Derive a cache slug from a source git URL (`<host>/<owner>/<repo>` → `<repo>`). */\nfunction sourceSlug(url: string): string {\n  return (\n    url\n      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The lock key is now a canonical asset ref, so this delegates to the one\n * ref parser; `AssetRef.pin` is exposed as `version` so the callers' destructuring\n * is unchanged. Stays total — callers rely on `{}`-then-`continue`, but\n * `parseAssetRef` throws, so a malformed key is caught and returned as `{}`.\n *\n * @internal Exported for unit tests; not part of the stable public surface.\n */\nexport function parseCanonicalLockKey(key: string): {\n  publisher?: string;\n  kind?: string;\n  name?: string;\n  version?: string;\n} {\n  try {\n    const ref = parseAssetRef(key);\n    return {\n      publisher: ref.publisher,\n      kind: ref.kind,\n      name: ref.name,\n      version: ref.pin,\n    };\n  } catch {\n    return {};\n  }\n}\n\nexport type { HistoryEntry } from \"./history.js\";\nexport {\n  appendHistory,\n  clearHistory,\n  getRecentHistory,\n  loadHistory,\n} from \"./history.js\";\n// Re-export sub-modules\nexport type { DeployOptions } from \"./installer.js\";\nexport { createScaffold, deployAll, removeAsset } from \"./installer.js\";\nexport type { Log } from \"./renderers.js\";\nexport { renderAgentToFramework } from \"./renderers.js\";\n// Contrib helpers (commitChanges et al.) are still used internally by the\n// patch-submit flow but are no longer part of the public API surface — the\n// `skaile repo contrib *` command tree was removed on 2026-05-12.\n\n// ── Types ────────────────────────────────────────────────────────────────────\n\n/**\n * Metadata about a repository declared in `skaile.yaml`.\n *\n * @docLink packages/asset-manager/concepts#asset-manager\n */\nexport interface RepoInfo {\n  /** Repository name as declared in `skaile.yaml`. */\n  name: string;\n  /** How the repo is sourced: cloned from a URL, mounted from a local path, or symlinked via `skaile repo link`. */\n  kind: \"local\" | \"remote\" | \"linked\";\n  /** Remote URL (present when `kind === \"remote\"`). */\n  url?: string;\n  /** Filesystem path (present when `kind === \"local\"` or `kind === \"linked\"`). */\n  path?: string;\n  /** Git branch configured for this repository. */\n  branch: string;\n  /** Whether the repository has been cloned/resolved locally. */\n  cloned: boolean;\n}\n\n/**\n * Live sync status for a repository.\n *\n * @docLink packages/asset-manager/concepts#asset-manager\n */\nexport interface RepoStatusInfo {\n  /** Repository name as declared in `skaile.yaml`. */\n  name: string;\n  /** How the repo is sourced. */\n  kind: \"local\" | \"remote\" | \"linked\";\n  /** Number of commits the local clone is behind the remote. */\n  behind: number;\n  /** `true` when the local clone matches the remote HEAD. */\n  upToDate: boolean;\n  /** Error message when status check failed. */\n  error?: string;\n}\n\n/**\n * Result of a full `skaile install` or `skaile add` run.\n *\n * @docLink packages/asset-manager/concepts#asset-manager\n */\nexport interface InstallResult {\n  /** Asset refs (`kind:name`) successfully deployed in this run. */\n  deployed: string[];\n  /** Asset refs (`kind:name`) removed because they are no longer in the resolved set. */\n  removed: string[];\n  /** Asset refs that could not be resolved in any configured repository. */\n  missing: string[];\n  /** Whether `skaile.lock.yaml` was written or updated. */\n  lockWritten: boolean;\n  /**\n   * npm packages installed as a side effect of resolving runtime asset peer\n   * deps (connectors / mounts declared in skaile.yaml). Empty when nothing\n   * needed installing or when the runtime-deps step was skipped.\n   */\n  npmInstalled?: string[];\n  /**\n   * npm packages that the runtime-deps step tried but failed to install.\n   * Non-fatal — listed for telemetry and CLI reporting.\n   */\n  npmFailed?: string[];\n}\n\n/**\n * An installed asset whose source repository is behind the remote.\n *\n * @docLink packages/asset-manager/concepts#asset-manager\n */\nexport interface OutdatedEntry {\n  /** Asset kind (`skill`, `agent`, `prompt`, `flow`, `contract`). */\n  kind: string;\n  /** Asset name as registered in the catalog. */\n  name: string;\n  /** Repository that provides this asset. */\n  publisher: string;\n  /** Version string recorded in the lock file at install time. */\n  currentVersion: string;\n  /** Number of commits the local repository is behind the remote. */\n  behind: number;\n}\n\n/**\n * A node in the resolved dependency tree (returned by `AssetManager.tree()`).\n *\n * @docLink packages/asset-manager/concepts#asset-manager\n */\nexport interface DependencyNode {\n  /** Asset ref (`kind:name`) or `\"project\"` for the root node. */\n  ref: string;\n  /** Transitive dependencies resolved by this node. */\n  children: DependencyNode[];\n}\n\n/**\n * A missing dependency detected by `AssetManager.doctor()`.\n *\n * @docLink packages/asset-manager/concepts#asset-manager\n */\nexport interface DepIssue {\n  /** Kind of the asset that has the unsatisfied requirement. */\n  assetKind: string;\n  /** Name of the asset that has the unsatisfied requirement. */\n  assetName: string;\n  /** Kind of the missing dependency. */\n  depKind: string;\n  /** Name of the missing dependency. */\n  depName: string;\n  /** `true` when the missing dependency exists in a configured repository but has not been installed. */\n  inRepos: boolean;\n}\n\n/**\n * A single deployed asset shown in the workspace overview.\n *\n * @docLink packages/asset-manager/concepts#asset-manager\n */\nexport interface OverviewEntry {\n  /** Asset kind (`skill`, `agent`, `prompt`, `flow`, `contract`). */\n  kind: string;\n  /** Asset name. */\n  name: string;\n  /** Domain the asset belongs to (from the lock file; `\"unknown\"` when unresolvable). */\n  domain: string;\n  /** Repository that provides this asset. */\n  publisher: string;\n  /** Version string from the lock file. */\n  version: string;\n  /**\n   * Sync status relative to the source repository.\n   * - `\"synced\"` — local clone matches remote HEAD\n   * - `\"outdated\"` — local clone is behind the remote\n   * - `\"local\"` — sourced from a local path, no remote to compare\n   * - `\"error\"` — status check failed\n   * - `\"unknown\"` — repository not found or lock entry missing\n   */\n  syncStatus: string;\n}\n\n/**\n * Aggregated workspace overview returned by `AssetManager.overview()`.\n *\n * @docLink packages/asset-manager/concepts#asset-manager\n */\nexport interface OverviewResult {\n  /** Entries grouped by domain, sorted alphabetically. Each group is sorted by kind then name. */\n  byDomain: Map<string, OverviewEntry[]>;\n  /** Total number of deployed assets. */\n  total: number;\n  /** Sync status for each configured repository. */\n  repos: RepoStatusInfo[];\n}\n\n// ── AssetManager ─────────────────────────────────────────────────────────────\n\n/**\n * Options for constructing an {@link AssetManager}.\n *\n * @docLink packages/asset-manager/concepts#asset-manager\n */\nexport interface AssetManagerOptions {\n  /** Absolute or relative path to the workspace root (must contain `skaile.yaml`). */\n  projectDir: string;\n  /**\n   * Agent framework to target for asset deployment.\n   * Determines which framework directories (``.claude/``, ``.omp/``, etc.) are used.\n   * Defaults to `\"claude-code\"`.\n   */\n  driverTarget?: DriverTarget;\n  /**\n   * When `true`, assets are installed into the global Skaile cache rather than the\n   * project workspace. Skips `skaile.yaml` dependency updates.\n   */\n  global?: boolean;\n}\n\n/** Canonical git URL identity for the bundled factory source. Never fetched —\n * the bytes live inside the package (`factory-assets/`); the URL is only the\n * match key the provenance walker and `candidateToCatalogEntry` key off. */\nconst FACTORY_SOURCE_URL = \"https://github.com/skaile-ai/ai-assets\";\n\n/**\n * Locate the built-in first-party skills/bundles shipped inside the package.\n *\n * Resolves through the shared {@link factoryAssetRoots} helper — the\n * `SKAILE_FACTORY_ASSETS_DIR` override layer (when set) ahead of the bundled\n * tree (in-repo source during dev, `dist/factory-assets/` after install), so a\n * container's override is honoured here identically to `serve`. Returns the\n * highest-precedence root that carries a `skaile.manifest.yaml` (the publication\n * manifest that names the source's publisher), or `null` when none qualifies —\n * the factory source is then simply not injected rather than erroring.\n */\nfunction resolveFactoryAssetsDir(): string | null {\n  for (const dir of factoryAssetRoots()) {\n    if (existsSync(join(dir, \"skaile.manifest.yaml\"))) return dir;\n  }\n  return null;\n}\n\n/** Read the declared `publisher` from a source's root `skaile.manifest.yaml`. */\nfunction readDeclaredPublisher(sourceDir: string): string | undefined {\n  try {\n    const raw = parseYaml(readFileSync(join(sourceDir, \"skaile.manifest.yaml\"), \"utf8\")) as {\n      publisher?: unknown;\n    } | null;\n    return raw && typeof raw.publisher === \"string\" && raw.publisher.length > 0\n      ? raw.publisher\n      : undefined;\n  } catch {\n    return undefined;\n  }\n}\n\n/**\n * The bundled factory source `{ dir, publisher }`, or `null` when no usable\n * bundle is present. Resolved once per process — the package location and the\n * bundled `skaile.manifest.yaml` are immutable for the process lifetime, so the\n * `require.resolve` + `existsSync` probes + YAML parse run a single time rather\n * than on every `loadConfig()` call. `undefined` = not yet computed.\n */\nlet factorySourceCache: { dir: string; publisher: string } | null | undefined;\n\nfunction resolveFactorySource(): { dir: string; publisher: string } | null {\n  if (factorySourceCache !== undefined) return factorySourceCache;\n  const dir = resolveFactoryAssetsDir();\n  const publisher = dir ? readDeclaredPublisher(dir) : undefined;\n  factorySourceCache = dir && publisher ? { dir, publisher } : null;\n  return factorySourceCache;\n}\n\n/**\n * Programmatic API for managing AI assets in a Skaile workspace.\n *\n * `AssetManager` wraps repository management, catalog search, asset installation,\n * lock-file tracking, patch workflows, and workspace diagnostics. The CLI delegates\n * all `skaile catalog`, `skaile repo`, `skaile install`, `skaile add`, and\n * `skaile init` commands to this class.\n *\n * @example\n * ```typescript\n * import { AssetManager } from \"@skaile/workspaces/asset-manager\";\n *\n * const am = new AssetManager({ projectDir: \"/my-project\" });\n *\n * // Install all dependencies declared in skaile.yaml\n * const result = await am.install();\n * console.log(`Deployed: ${result.deployed.join(\", \")}`);\n *\n * // Add a single skill (resolves transitive deps, updates skaile.yaml)\n * const deployed = am.add(\"skill:my-skill\");\n *\n * // Search the catalog\n * const skills = am.search(\"code review\", \"skill\");\n * ```\n *\n * @docLink packages/asset-manager/concepts#asset-manager\n */\nexport class AssetManager {\n  /** Resolved absolute path to the workspace root. */\n  readonly projectDir: string;\n  /** Agent framework driver target used for all deploy operations. */\n  readonly driverTarget: DriverTarget;\n  /** Whether this instance operates in global-install mode. */\n  readonly global: boolean;\n\n  constructor(opts: AssetManagerOptions) {\n    this.projectDir = resolve(opts.projectDir);\n    this.driverTarget = opts.driverTarget ?? (\"claude-code\" as DriverTarget);\n    this.global = opts.global ?? false;\n  }\n\n  private get reposDir(): string {\n    return join(this.projectDir, \".skaile\", \"repos\");\n  }\n\n  private get lockPath(): string {\n    return join(this.projectDir, \"skaile.lock.yaml\");\n  }\n\n  private get patchDir(): string {\n    return join(this.projectDir, \".skaile\", \"patches\");\n  }\n\n  private get deployOpts(): DeployOptions {\n    return { driverTarget: this.driverTarget, global: this.global, cwd: this.projectDir };\n  }\n\n  private loadConfig(): {\n    repositories: Record<string, SourceDeclaration>;\n    sources: SourceEntry[];\n    stores: StoreEntry[];\n    dependencies: string[];\n    overrides: OverrideEntry[];\n    patches: Record<string, string>;\n    config: SkWorkspaceConfig;\n  } {\n    // resolveSkWorkspaceConfig runs the canonical normalizer and throws on\n    // legacy keys (`repositories:` / `ai_resources:`) — propagate to the caller.\n    const config = resolveSkWorkspaceConfig(this.projectDir);\n\n    const sources = config.sources ?? [];\n    const stores = config.stores ?? [];\n    const dependencies = config.dependencies ?? [];\n    const overrides = config.overrides ?? [];\n    const patches = config.patches ?? {};\n\n    // Internal install-pipeline map: slug (derived from the source URL) →\n    // SourceDeclaration pointing at the machine-cache clone under\n    // ~/.skaile/sources/<slug>/. The slug is also the cache key for ensureRepo.\n    const skaileHome = process.env.SKAILE_HOME ?? join(homedir(), \".skaile\");\n    const sourcesDir = join(skaileHome, \"sources\");\n    const repositories: Record<string, SourceDeclaration> = {};\n    for (const s of sources) {\n      const slug = sourceSlug(s.url);\n      if (repositories[slug]) continue;\n      repositories[slug] = { path: join(sourcesDir, slug), url: s.url };\n    }\n\n    // Implicit built-in source: the first-party assets shipped inside the\n    // package (`dist/factory-assets/`). Always available, zero config — keyed by\n    // its declared publisher so refs (`kind:@<publisher>/name`) and `info`\n    // resolve cleanly. Skipped when the user already declares the same source\n    // explicitly (avoids duplicate catalog entries) or when no bundle is present.\n    const factory = resolveFactorySource();\n    const factoryUrl = normalizeRepoUrl(FACTORY_SOURCE_URL);\n    const alreadyDeclared = Object.values(repositories).some(\n      (d) => d.url !== undefined && normalizeRepoUrl(d.url) === factoryUrl,\n    );\n    if (factory && !alreadyDeclared && !repositories[factory.publisher]) {\n      repositories[factory.publisher] = {\n        path: factory.dir,\n        url: FACTORY_SOURCE_URL,\n        factory: true,\n      };\n    }\n\n    return { repositories, sources, stores, dependencies, overrides, patches, config };\n  }\n\n  /** Build provenance-index clones from the resolved source declarations. */\n  private buildClones(repositories: Record<string, SourceDeclaration>): SourceClone[] {\n    const clones: SourceClone[] = [];\n    for (const [slug, decl] of Object.entries(repositories)) {\n      const localPath = this.resolveRepoDir(decl, slug);\n      if (!localPath || !existsSync(localPath)) continue;\n      const commit = getRepoCommit(localPath) ?? \"0\".repeat(40);\n      clones.push({\n        localPath,\n        sourceUrl: decl.url ?? localPath,\n        commit,\n        tag: decl.branch,\n      });\n    }\n    return clones;\n  }\n\n  /**\n   * Bridge a resolved {@link ProvenanceCandidate} to a {@link CatalogEntry} for\n   * the deploy pipeline. `source` is the absolute path to the asset's primary\n   * manifest (or its directory) inside the clone; `publisher` is set to the\n   * clone slug so `deployAll`'s repositories lookup resolves local-vs-remote.\n   */\n  private candidateToCatalogEntry(\n    c: ProvenanceCandidate,\n    repositories: Record<string, SourceDeclaration>,\n  ): CatalogEntry | null {\n    // Find the clone slug whose declaration URL matches the candidate's source.\n    let slug: string | undefined;\n    let cloneDir: string | undefined;\n    for (const [s, decl] of Object.entries(repositories)) {\n      if (decl.url === c.sourceUrl) {\n        slug = s;\n        cloneDir = this.resolveRepoDir(decl, s) ?? undefined;\n        break;\n      }\n    }\n    if (!cloneDir) {\n      // Store-resolved or unknown source — fall back to the first source clone.\n      const first = Object.entries(repositories)[0];\n      if (first) {\n        slug = first[0];\n        cloneDir = this.resolveRepoDir(first[1], first[0]) ?? undefined;\n      }\n    }\n    if (!cloneDir || !slug) return null;\n\n    const MD_BY_KIND: Record<string, string> = {\n      skill: \"SKILL.md\",\n      agent: \"AGENT.md\",\n      bundle: \"BUNDLE.md\",\n      \"mcp-server\": \"MCP.md\",\n      connector: \"CONNECTOR.md\",\n      prompt: \"PROMPT.md\",\n      contract: \"CONTRACT.md\",\n    };\n    const mdName = MD_BY_KIND[c.kind];\n    const mdRel = c.files.find((f) => (mdName ? f.path.endsWith(mdName) : false))?.path;\n    const source = mdRel ? join(cloneDir, mdRel) : cloneDir;\n\n    const entry: CatalogEntry = {\n      name: c.name,\n      kind: c.kind as CatalogEntry[\"kind\"],\n      description: c.description ?? \"\",\n      source,\n      publisher: slug,\n      version: c.version,\n      requires: [],\n      // Manifest-declared deps are authoritative for the candidate's deps.\n      dependencies: c.deps ?? [],\n      metadata: c.metadata,\n    };\n    if (c.category != null) entry.category = c.category;\n    if (c.keywords && c.keywords.length > 0) entry.keywords = c.keywords;\n    if (c.license != null) entry.license = c.license;\n    if (c.homepage != null) entry.homepage = c.homepage;\n    return entry;\n  }\n\n  // ── Install / resolve ──────────────────────────────────────────────────\n\n  /**\n   * Install all dependencies declared in `skaile.yaml`.\n   *\n   * Steps: clone/pull repositories → resolve transitive dependencies → reconcile\n   * (remove stale assets) → deploy new assets → write `skaile.lock.yaml` → record history.\n   *\n   * @param opts - Optional installation options.\n   * @param opts.locked - When `true`, restore the exact versions recorded in the existing\n   *   lock file instead of resolving from source. Throws if no lock file is found.\n   * @returns {@link InstallResult} summarising what was deployed, what was missing, and any collisions.\n   */\n  async install(opts?: { locked?: boolean }): Promise<InstallResult> {\n    const { repositories, sources, stores, dependencies, overrides, patches } = this.loadConfig();\n\n    if (opts?.locked) {\n      return this.installLocked(repositories, patches);\n    }\n\n    // 1. Ensure all source clones are present/up to date.\n    const cloneError = this.ensureSourceClones(repositories, sources);\n    if (cloneError) return cloneError;\n\n    // 2. Build the provenance index from the clones and resolve.\n    const provenanceIndex = buildProvenanceIndex(this.buildClones(repositories), {\n      projectDir: this.projectDir,\n    });\n    const { resolved, missing, overridesApplied } = await resolveAll(dependencies, {\n      provenanceIndex,\n      overrides,\n      stores,\n      storeFetcher: this.buildStoreFetcher(stores),\n      projectDir: this.projectDir,\n    });\n\n    // 3. Reconcile: remove stale assets (in old lock but not in new resolved set).\n    const removed = this.reconcileRemovedAssets(resolved);\n\n    // 4. Map candidates to catalog entries and deploy.\n    const entries = resolved\n      .map((c) => this.candidateToCatalogEntry(c, repositories))\n      .filter((e): e is CatalogEntry => e !== null);\n    const deployed = deployAll(entries, repositories, patches, this.deployOpts);\n\n    // 5. Write the v2 lock file.\n    writeLock(this.lockPath, buildLockFile(resolved, overridesApplied));\n\n    // 6. Record history.\n    this.recordInstallHistory(deployed, removed);\n\n    // 7. Install npm peer deps for any mount/connector declared in skaile.yaml.\n    const { npmInstalled, npmFailed } = await this.installRuntimeAssetDeps();\n\n    return { deployed, removed, missing, lockWritten: true, npmInstalled, npmFailed };\n  }\n\n  /**\n   * Ensure all source clones are present/up to date. Returns an early\n   * {@link InstallResult} describing the failed source on the first error, or\n   * `null` when every clone succeeds.\n   */\n  private ensureSourceClones(\n    repositories: Record<string, SourceDeclaration>,\n    sources: SourceEntry[],\n  ): InstallResult | null {\n    const pinBySlug = new Map(sources.map((s) => [sourceSlug(s.url), s.pin]));\n    for (const [name, decl] of Object.entries(repositories)) {\n      try {\n        ensureRepo(decl, name, this.reposDir, {\n          projectDir: this.projectDir,\n          pin: pinBySlug.get(name),\n        });\n      } catch (err) {\n        return {\n          deployed: [],\n          removed: [],\n          missing: [`source:${name} (${err instanceof Error ? err.message : String(err)})`],\n          lockWritten: false,\n        };\n      }\n    }\n    return null;\n  }\n\n  /**\n   * Remove stale assets — those recorded in the old lock but absent from the\n   * newly resolved set. Returns the list of removed refs.\n   */\n  private reconcileRemovedAssets(resolved: ProvenanceCandidate[]): string[] {\n    const oldLock = this.tryReadLock();\n    const resolvedRefs = new Set(\n      resolved.map((c) => `${c.publisher}/${c.kind}:${c.name}@${c.version}`),\n    );\n    const removed: string[] = [];\n    if (oldLock) {\n      for (const ref of Object.keys(oldLock.assets)) {\n        if (!resolvedRefs.has(ref)) {\n          const { kind, name } = parseCanonicalLockKey(ref);\n          if (kind && name) {\n            removeAsset(kind, name, this.deployOpts);\n            removed.push(ref);\n          }\n        }\n      }\n    }\n    return removed;\n  }\n\n  /** Append `add`/`remove` history entries for a completed install reconcile. */\n  private recordInstallHistory(deployed: string[], removed: string[]): void {\n    for (const ref of deployed) {\n      appendHistory(this.projectDir, {\n        ref,\n        action: \"add\",\n        timestamp: new Date().toISOString(),\n        context: this.global ? \"global\" : \"project\",\n      });\n    }\n    for (const ref of removed) {\n      appendHistory(this.projectDir, {\n        ref,\n        action: \"remove\",\n        timestamp: new Date().toISOString(),\n        context: this.global ? \"global\" : \"project\",\n      });\n    }\n  }\n\n  /** Read the lock, returning null on a legacy v1 lock instead of throwing. */\n  private tryReadLock(): LockFile | null {\n    try {\n      return readLock(this.lockPath);\n    } catch {\n      return null;\n    }\n  }\n\n  /** Build a store fetcher from the configured stores, or undefined when none. */\n  private buildStoreFetcher(stores: StoreEntry[]): StoreFetcher | undefined {\n    if (stores.length === 0) return undefined;\n    return {\n      getInstallManifest: async (storeUrl, ref) => {\n        const { RemoteCatalogSource, CatalogHttpError } = await import(\n          \"@skaile/workspaces/library\"\n        );\n        const src = new RemoteCatalogSource({ baseUrl: storeUrl });\n        try {\n          const m = await src.getInstallManifest(ref);\n          return {\n            sourceUrl: m.source.url,\n            commit: m.source.commitSha,\n            sha256: m.sha256,\n            files: m.files,\n          };\n        } catch (err) {\n          if (err instanceof CatalogHttpError && err.status === 404) return null;\n          throw err;\n        }\n      },\n      getCanonicalDigest: async (storeUrl, ref) => {\n        const { RemoteCatalogSource } = await import(\"@skaile/workspaces/library\");\n        const src = new RemoteCatalogSource({ baseUrl: storeUrl });\n        return src.getCanonicalDigest(ref);\n      },\n    };\n  }\n\n  /**\n   * Resolve runtime assets and install any missing npm peer deps.\n   *\n   * - Required deps: installed via `bun add --optional`. Failure is recorded\n   *   in `npmFailed` but does not throw — install() proceeds so users get a\n   *   useful error message rather than a hung command.\n   * - Optional deps: not installed automatically (would force every consumer\n   *   to pull every connector's deps). Future: add a flag to opt in.\n   */\n  private async installRuntimeAssetDeps(): Promise<{\n    npmInstalled: string[];\n    npmFailed: string[];\n  }> {\n    const npmInstalled: string[] = [];\n    const npmFailed: string[] = [];\n    let runtimeAssets: Awaited<ReturnType<typeof resolveRuntimeAssets>> | null = null;\n    try {\n      runtimeAssets = await resolveRuntimeAssets(this.projectDir);\n    } catch {\n      // Non-fatal — projects with no skaile.yaml or unresolvable factory-assets\n      // simply have no runtime deps to install.\n      return { npmInstalled, npmFailed };\n    }\n\n    const required = runtimeAssets.requiredNpmDeps.required;\n    if (required.length === 0) return { npmInstalled, npmFailed };\n\n    const { findMissingPackages, installNpmPackages } = await import(\n      \"@skaile/workspaces/connectors\"\n    );\n    const missing = findMissingPackages(required, this.projectDir);\n    if (missing.length === 0) return { npmInstalled, npmFailed };\n\n    const result = await installNpmPackages(missing, this.projectDir);\n    if (result.success) {\n      npmInstalled.push(...missing);\n    } else {\n      npmFailed.push(...missing);\n    }\n    return { npmInstalled, npmFailed };\n  }\n\n  private installLocked(\n    repositories: Record<string, SourceDeclaration>,\n    patches: Record<string, string>,\n  ): InstallResult {\n    const lock = this.tryReadLock();\n    if (!lock) {\n      throw new Error(\"No lock file found. Run `skaile install` first.\");\n    }\n\n    // Ensure every contributing source clone exists at its pinned commit. Sources\n    // are keyed by URL slug; the lock's `sources[]` carries the URL + commit.\n    const declBySlug = new Map(Object.entries(repositories));\n    for (const src of lock.sources) {\n      const slug = sourceSlug(src.url);\n      const decl = declBySlug.get(slug) ?? { url: src.url };\n      ensureRepo(decl, slug, this.reposDir, { projectDir: this.projectDir, pin: src.commit });\n    }\n\n    // Resolve a source URL to its on-disk clone for verification.\n    const resolveCloneDir = (sourceUrl: string): string | null => {\n      const slug = sourceSlug(sourceUrl);\n      const decl = declBySlug.get(slug) ?? { url: sourceUrl };\n      return this.resolveRepoDir(decl, slug);\n    };\n\n    // Verify integrity against the v2 lock.\n    const verification = verifyLock(lock, resolveCloneDir);\n    if (!verification.ok) {\n      const issues = [\n        ...verification.drifted.map((r) => `drifted: ${r}`),\n        ...verification.missing.map((r) => `missing: ${r}`),\n      ];\n      throw new Error(`Lock file verification failed:\\n  ${issues.join(\"\\n  \")}`);\n    }\n\n    // Rebuild catalog entries from the lock and deploy.\n    const resolved: CatalogEntry[] = [];\n    for (const [ref, entry] of Object.entries(lock.assets)) {\n      const { publisher, kind, name } = parseCanonicalLockKey(ref);\n      if (!publisher || !kind || !name) continue;\n      const slug = sourceSlug(entry.source.url);\n      const cloneDir = resolveCloneDir(entry.source.url) ?? join(this.reposDir, slug);\n      const mdRel =\n        entry.files.find((f) => /\\.(md|yaml)$/i.test(f.path))?.path ?? entry.files[0]?.path ?? \"\";\n      resolved.push({\n        name,\n        kind: kind as CatalogEntry[\"kind\"],\n        description: \"\",\n        source: mdRel ? join(cloneDir, mdRel) : cloneDir,\n        publisher: slug,\n        version: entry.source.commit,\n        requires: [],\n        dependencies: [],\n      });\n      // Ensure the repositories map has an entry for deployAll's local/remote check.\n      if (!repositories[slug]) repositories[slug] = { url: entry.source.url, path: cloneDir };\n    }\n\n    const deployed = deployAll(resolved, repositories, patches, this.deployOpts);\n    return { deployed, removed: [], missing: [], lockWritten: false };\n  }\n\n  /**\n   * Add a single asset (and its transitive dependencies) to the workspace.\n   *\n   * Resolves `ref`, deploys the asset and all requirements, then records the ref\n   * in `skaile.yaml` `dependencies` so subsequent `skaile install` runs re-deploy it.\n   *\n   * @param ref - Asset ref in `kind:name` or `repo/kind:name` form (e.g. `skill:my-skill`).\n   * @returns Array of asset refs that were deployed in this call.\n   * @throws When the asset cannot be found in any configured repository.\n   */\n  async add(ref: string): Promise<string[]> {\n    const { repositories, stores, overrides, patches } = this.loadConfig();\n    const parsed = parseAssetRef(ref);\n\n    // Ensure clones.\n    for (const [name, decl] of Object.entries(repositories)) {\n      try {\n        ensureRepo(decl, name, this.reposDir, { projectDir: this.projectDir });\n      } catch {}\n    }\n\n    const provenanceIndex = buildProvenanceIndex(this.buildClones(repositories), {\n      projectDir: this.projectDir,\n    });\n    const { resolved, missing } = await resolveAll([ref], {\n      provenanceIndex,\n      overrides,\n      stores,\n      storeFetcher: this.buildStoreFetcher(stores),\n      projectDir: this.projectDir,\n    });\n    if (resolved.length === 0) {\n      throw new Error(\n        `Asset not found: ${ref}${missing.length ? ` (missing: ${missing.join(\", \")})` : \"\"}`,\n      );\n    }\n\n    const entries = resolved\n      .map((c) => this.candidateToCatalogEntry(c, repositories))\n      .filter((e): e is CatalogEntry => e !== null);\n    const deployed = deployAll(entries, repositories, patches, this.deployOpts);\n\n    // Add to skaile.yaml dependencies (canonical ref string).\n    this.addDependencyToConfig(ref);\n\n    for (const d of deployed) {\n      appendHistory(this.projectDir, {\n        ref: d,\n        action: \"add\",\n        timestamp: new Date().toISOString(),\n        context: this.global ? \"global\" : \"project\",\n      });\n    }\n\n    return deployed;\n  }\n\n  /**\n   * Remove a deployed asset and unregister it from `skaile.yaml`.\n   *\n   * @param ref - Asset ref in `kind:name` form (e.g. `skill:my-skill`).\n   * @returns `true` if the asset was found and removed, `false` if it was not deployed.\n   */\n  remove(ref: string): boolean {\n    const parsed = parseAssetRef(ref);\n    const ok = removeAsset(parsed.kind, parsed.name, this.deployOpts);\n    if (ok) {\n      const depRef = `${parsed.kind}:${parsed.name}`;\n      this.removeDependencyFromConfig(depRef);\n\n      appendHistory(this.projectDir, {\n        ref: depRef,\n        action: \"remove\",\n        timestamp: new Date().toISOString(),\n        context: this.global ? \"global\" : \"project\",\n      });\n    }\n    return ok;\n  }\n\n  // ── Query ──────────────────────────────────────────────────────────────\n\n  /**\n   * Search the catalog across all configured repositories.\n   *\n   * @param query - Substring to match against entry names and descriptions (case-insensitive).\n   *   Omit to return all entries.\n   * @param kind - Filter by asset kind (`\"skill\"`, `\"agent\"`, `\"prompt\"`, `\"flow\"`, `\"contract\"`).\n   *   Omit to return all kinds.\n   * @returns Array of matching {@link CatalogEntry} objects from all accessible repositories.\n   */\n  search(query?: string, kind?: string): CatalogEntry[] {\n    const { repositories } = this.loadConfig();\n    let all: CatalogEntry[] = [];\n\n    for (const [name, decl] of Object.entries(repositories)) {\n      const repoDir = this.resolveRepoDir(decl, name);\n      if (!repoDir) continue;\n      all = [...all, ...scanRepo(repoDir, name)];\n    }\n\n    if (kind) all = all.filter((e) => e.kind === kind);\n    if (query) {\n      const q = query.toLowerCase();\n      all = all.filter(\n        (e) => e.name.toLowerCase().includes(q) || e.description.toLowerCase().includes(q),\n      );\n    }\n    return all;\n  }\n\n  /**\n   * Look up a single asset's full catalog entry.\n   *\n   * @param ref - Asset ref in `kind:name` or `repo/kind:name` form.\n   * @returns The matching {@link CatalogEntry}, or `null` when not found.\n   */\n  info(ref: string): CatalogEntry | null {\n    const { repositories } = this.loadConfig();\n    const parsed = parseAssetRef(ref);\n\n    for (const [name, decl] of Object.entries(repositories)) {\n      const repoDir = this.resolveRepoDir(decl, name);\n      if (!repoDir) continue;\n      // Match on the entry's scanned (manifest) publisher, not the repo map key\n      // (= URL slug). The two are unrelated identities under canonical schema.\n      const entries = scanRepo(repoDir, name);\n      const match = entries.find(\n        (e) =>\n          e.kind === parsed.kind &&\n          e.name === parsed.name &&\n          (!parsed.publisher || e.publisher === parsed.publisher),\n      );\n      if (match) return match;\n    }\n    return null;\n  }\n\n  /**\n   * List all assets currently deployed in the workspace (or global cache).\n   *\n   * Scans the framework deploy directories rather than the lock file, so it\n   * also returns assets that were installed manually or outside of `skaile install`.\n   *\n   * @param kind - Filter by asset kind. Omit to return all kinds.\n   * @returns Shallow {@link CatalogEntry} objects (description and version will be empty).\n   */\n  listDeployed(kind?: string): CatalogEntry[] {\n    // Bundles are dependency groups, not deployed as files — exclude from scan\n    const kinds = (\n      kind ? [kind] : [\"skill\", \"agent\", \"prompt\", \"flow\", \"contract\"]\n    ) as AiComponent[];\n    const result: CatalogEntry[] = [];\n    const seen = new Set<string>();\n    for (const k of kinds) {\n      try {\n        const base = deployedBase(k, this.driverTarget, this.global, this.projectDir);\n        if (!existsSync(base)) continue;\n        for (const item of readdirSync(base, { withFileTypes: true })) {\n          // Directories and symlinks use the directory name directly (skills, omp agents, etc.)\n          // Files use the stem without extension (claude-code agents → .md, codex agents → .toml,\n          // prompts → .prompt.md, flows → .flow.yaml/.flow.json)\n          let name: string;\n          if (item.isDirectory() || item.isSymbolicLink()) {\n            name = item.name;\n          } else if (item.isFile()) {\n            name = item.name\n              .replace(/\\.prompt\\.md$/, \"\")\n              .replace(/\\.flow\\.(yaml|json)$/, \"\")\n              .replace(/\\.bundle\\.yaml$/, \"\")\n              .replace(/\\.(md|toml|yaml|json)$/, \"\");\n          } else {\n            continue;\n          }\n          const key = `${k}:${name}`;\n          if (seen.has(key)) continue;\n          seen.add(key);\n          result.push({\n            name,\n            kind: k as any,\n            description: \"\",\n            source: join(base, item.name),\n            version: \"\",\n            requires: [],\n            dependencies: [],\n          });\n        }\n      } catch {}\n    }\n    return result;\n  }\n\n  /**\n   * Build an aggregated workspace overview with domain grouping and sync status.\n   *\n   * Combines deployed assets, lock file metadata, and live repository status\n   * into a single structured result. Used by `skaile status`.\n   *\n   * @returns {@link OverviewResult} with entries grouped by domain and per-repo sync status.\n   */\n  overview(): OverviewResult {\n    const { repositories } = this.loadConfig();\n    const lock = this.tryReadLock();\n    const deployed = this.listDeployed();\n\n    const repoStatuses = this.buildRepoStatuses(repositories);\n    const lockByKindName = indexLockByKindName(lock);\n\n    // Build entries with publisher + sync info. Domain grouping is by publisher\n    // now that the lock no longer records a project-local domain.\n    const entries: OverviewEntry[] = [];\n    for (const d of deployed) {\n      const lockEntry = lockByKindName.get(`${d.kind}:${d.name}`);\n      const publisher = lockEntry?.publisher ?? \"\";\n      const version = lockEntry?.version ?? \"\";\n      const slug = lockEntry ? sourceSlug(lockEntry.url) : \"\";\n      const syncStatus = slug ? computeSyncStatus(repoStatuses.get(slug)) : \"unknown\";\n      const domain = publisher || \"unknown\";\n      entries.push({ kind: d.kind, name: d.name, domain, publisher, version, syncStatus });\n    }\n\n    return {\n      byDomain: groupAndSortByDomain(entries),\n      total: entries.length,\n      repos: [...repoStatuses.values()],\n    };\n  }\n\n  /** Collect live sync status for every configured repository, keyed by name. */\n  private buildRepoStatuses(\n    repositories: Record<string, SourceDeclaration>,\n  ): Map<string, RepoStatusInfo> {\n    const repoStatuses = new Map<string, RepoStatusInfo>();\n    for (const [name, decl] of Object.entries(repositories)) {\n      const status = checkRepoStatus(decl, name, this.reposDir);\n      repoStatuses.set(name, {\n        name,\n        kind: status.kind,\n        behind: status.behind,\n        upToDate: status.upToDate,\n        error: status.error,\n      });\n    }\n    return repoStatuses;\n  }\n\n  /**\n   * Build the resolved dependency tree from the lock file.\n   *\n   * @returns Root {@link DependencyNode} with `ref === \"project\"` whose children\n   *   are the directly-declared dependencies, each with their own transitive subtrees.\n   *   Returns a single node with `ref === \"(no lock file)\"` when no lock exists.\n   */\n  tree(): DependencyNode {\n    const lock = this.tryReadLock();\n    if (!lock) return { ref: \"(no lock file)\", children: [] };\n\n    // v2 lock no longer records per-asset parent provenance — every locked asset\n    // is shown as a direct child of the project (flat tree).\n    return {\n      ref: \"project\",\n      children: Object.keys(lock.assets).map((ref) => ({ ref, children: [] })),\n    };\n  }\n\n  /**\n   * Explain why an asset is installed by tracing its dependency chain in the lock file.\n   *\n   * @param ref - Asset ref in `kind:name` form.\n   * @returns Chain of refs from the asset back to `\"direct (skaile.yaml)\"`, or `[]` when\n   *   the asset is not in the lock file.\n   */\n  why(ref: string): string[] {\n    const lock = this.tryReadLock();\n    if (!lock) return [];\n    if (!lock.assets[ref]) return []; // not in lock file\n    // v2 lock no longer records a dep chain — every locked asset is reported as\n    // directly declared. (Transitive provenance reconstruction is out of scope.)\n    return [ref, \"direct (skaile.yaml)\"];\n  }\n\n  /**\n   * List installed assets whose source repository is behind the remote.\n   *\n   * Only remote repositories (not local paths) are checked for staleness.\n   *\n   * @returns Array of {@link OutdatedEntry} objects, one per asset in a repository\n   *   that has commits not yet pulled locally.\n   */\n  outdated(): OutdatedEntry[] {\n    const { repositories } = this.loadConfig();\n    const lock = this.tryReadLock();\n    if (!lock) return [];\n\n    const result: OutdatedEntry[] = [];\n    for (const src of lock.sources) {\n      const slug = sourceSlug(src.url);\n      const decl = repositories[slug];\n      if (!decl || decl.path) continue; // skip unknown / local sources\n      const status = checkRepoStatus(decl, slug, this.reposDir);\n      if (status.behind <= 0) continue;\n      for (const [ref, entry] of Object.entries(lock.assets)) {\n        if (entry.source.url !== src.url) continue;\n        const { publisher, kind, name, version } = parseCanonicalLockKey(ref);\n        if (!kind || !name) continue;\n        result.push({\n          kind,\n          name,\n          publisher: publisher ?? slug,\n          currentVersion: version ?? \"\",\n          behind: status.behind,\n        });\n      }\n    }\n    return result;\n  }\n\n  /**\n   * Produce a unified diff between the deployed asset and its catalog source.\n   *\n   * Useful for detecting manual edits to deployed files or verifying that a patch\n   * was applied correctly.\n   *\n   * @param ref - Asset ref in `kind:name` form.\n   * @returns Unified diff string, or `null` when there are no differences or the\n   *   asset is not deployed/resolvable.\n   */\n  diff(ref: string): string | null {\n    const parsed = parseAssetRef(ref);\n    const entry = this.info(ref);\n    if (!entry) return null;\n\n    const deployedPath = join(\n      deployedBase(parsed.kind as AiComponent, this.driverTarget, this.global, this.projectDir),\n      parsed.name,\n    );\n    if (!existsSync(deployedPath) || !existsSync(entry.source)) return null;\n\n    const r = spawnSync(\"diff\", [\"-ruN\", entry.source, deployedPath], { encoding: \"utf8\" });\n    return r.status === 1 ? r.stdout : null;\n  }\n\n  // ── Lock ───────────────────────────────────────────────────────────────\n\n  /**\n   * Resolve all declared dependencies and write (or overwrite) `skaile.lock.yaml`.\n   *\n   * Performs repository sync and full dependency resolution without deploying assets.\n   * Use this to regenerate the lock file after manually editing `skaile.yaml`.\n   *\n   * @returns The written {@link LockFile} data.\n   */\n  async lock(): Promise<LockFile> {\n    const { repositories, stores, dependencies, overrides } = this.loadConfig();\n\n    for (const [name, decl] of Object.entries(repositories)) {\n      try {\n        ensureRepo(decl, name, this.reposDir, { projectDir: this.projectDir });\n      } catch {}\n    }\n\n    const provenanceIndex = buildProvenanceIndex(this.buildClones(repositories), {\n      projectDir: this.projectDir,\n    });\n    const { resolved, overridesApplied } = await resolveAll(dependencies, {\n      provenanceIndex,\n      overrides,\n      stores,\n      storeFetcher: this.buildStoreFetcher(stores),\n      projectDir: this.projectDir,\n    });\n    const lockData = buildLockFile(resolved, overridesApplied);\n    writeLock(this.lockPath, lockData);\n    return lockData;\n  }\n\n  // ── Patch workflow ─────────────────────────────────────────────────────\n\n  /**\n   * Extract a deployed asset into a patch working directory for editing.\n   *\n   * Copies the deployed asset to `.skaile/patches/<kind>-<name>/` so changes\n   * can be made there and then committed as a patch file via `patchCommit`.\n   *\n   * @param ref - Asset ref in `kind:name` form.\n   * @returns Absolute path to the patch working directory.\n   * @throws When the asset cannot be found in the catalog.\n   */\n  patch(ref: string): string {\n    const entry = this.info(ref);\n    if (!entry) throw new Error(`Asset not found: ${ref}`);\n    return extractForPatch(entry, this.patchDir);\n  }\n\n  /**\n   * Generate a `.patch` file from changes made in the patch working directory.\n   *\n   * Diffs the patch working directory against the original catalog source and\n   * writes the result to `.skaile/patches/<kind>-<name>.patch`.\n   *\n   * @param ref - Asset ref in `kind:name` form.\n   * @returns Absolute path to the generated `.patch` file.\n   * @throws When the patch working directory does not exist or no differences are found.\n   */\n  patchCommit(ref: string): string {\n    const parsed = parseAssetRef(ref);\n    const entry = this.info(ref);\n    if (!entry) throw new Error(`Asset not found: ${ref}`);\n\n    const patchedDir = join(this.patchDir, `${parsed.kind}-${parsed.name}`);\n    if (!existsSync(patchedDir)) {\n      throw new Error(`No patch working dir found. Run \\`skaile patch ${ref}\\` first.`);\n    }\n\n    const originalDir = dirname(entry.source);\n    const content = generatePatch(originalDir, patchedDir);\n    if (!content) throw new Error(\"No differences found.\");\n\n    const patchFile = join(this.patchDir, `${parsed.kind}-${parsed.name}.patch`);\n    savePatch(patchFile, content);\n    return patchFile;\n  }\n\n  /**\n   * Apply the committed patch file to the repository clone and open a contribution branch.\n   *\n   * Applies `.skaile/patches/<kind>-<name>.patch` to the repository clone, creates a\n   * `patch/<kind>-<name>` branch, and stages a commit — ready to push via `contribPush`.\n   *\n   * @param ref - Asset ref in `kind:name` form.\n   * @throws When the asset is not found, has no repository, or the patch file is missing.\n   */\n  patchSubmit(ref: string): void {\n    const parsed = parseAssetRef(ref);\n    const entry = this.info(ref);\n    if (!entry?.publisher) throw new Error(`Asset not found or no publisher: ${ref}`);\n\n    const { repositories } = this.loadConfig();\n    const decl = repositories[entry.publisher];\n    if (!decl?.url) throw new Error(\"Can only submit patches for remote sources.\");\n\n    // Resolve through the same helper search/info use so patch + read agree on the clone dir.\n    const repoDir = this.resolveRepoDir(decl, entry.publisher);\n    if (!repoDir) throw new Error(`Repository clone not found for ${entry.publisher}.`);\n    const branchName = `patch/${parsed.kind}-${parsed.name}`;\n\n    // Apply patch to repo clone\n    const patchFile = join(this.patchDir, `${parsed.kind}-${parsed.name}.patch`);\n    if (!existsSync(patchFile)) throw new Error(\"No patch file. Run `skaile patch-commit` first.\");\n\n    coreApplyPatch(repoDir, patchFile);\n    commitChanges(repoDir, `fix: improve ${parsed.kind} ${parsed.name}`, branchName);\n  }\n\n  /**\n   * Delete the patch working directory and patch file for an asset.\n   *\n   * @param ref - Asset ref in `kind:name` form.\n   */\n  patchRemove(ref: string): void {\n    const parsed = parseAssetRef(ref);\n    const patchFile = join(this.patchDir, `${parsed.kind}-${parsed.name}.patch`);\n    const patchedDir = join(this.patchDir, `${parsed.kind}-${parsed.name}`);\n    try {\n      rmSync(patchFile);\n    } catch {}\n    try {\n      rmSync(patchedDir, { recursive: true });\n    } catch {}\n  }\n\n  // ── Doctor ─────────────────────────────────────────────────────────────\n\n  /**\n   * Scan deployed assets for unsatisfied transitive dependencies.\n   *\n   * For each deployed asset, checks that all entries in its `requires` list are\n   * also deployed. Returns a list of issues with a flag indicating whether the\n   * missing dependency can be resolved from a configured repository.\n   *\n   * @returns Array of {@link DepIssue} objects. An empty array means the workspace is healthy.\n   */\n  doctor(): DepIssue[] {\n    const { repositories } = this.loadConfig();\n    const deployed = this.listDeployed();\n    const issues: DepIssue[] = [];\n\n    for (const entry of deployed) {\n      const full = this.info(`${entry.kind}:${entry.name}`);\n      if (!full) continue;\n      for (const req of full.requires) {\n        if (\n          !isDeployed(\n            req.kind as AiComponent,\n            req.name,\n            this.driverTarget,\n            this.global,\n            this.projectDir,\n          )\n        ) {\n          const inRepos =\n            resolveAsset({ kind: req.kind, name: req.name }, repositories, this.reposDir) !== null;\n          issues.push({\n            assetKind: entry.kind,\n            assetName: entry.name,\n            depKind: req.kind,\n            depName: req.name,\n            inRepos,\n          });\n        }\n      }\n    }\n    return issues;\n  }\n\n  // ── Scaffold ───────────────────────────────────────────────────────────\n\n  /**\n   * Create a minimal asset scaffold directory (delegates to {@link createScaffold}).\n   *\n   * @param name - Asset name (also used as the directory name).\n   * @param kind - Asset kind: `skill` | `agent` | `bundle` | `flow` | `prompt` | `contract`.\n   * @param destDir - Parent directory to create the asset in.\n   * @returns `{ ok: true, path }` on success, `{ ok: false, path: errorMessage }` if the\n   *   directory already exists.\n   */\n  create(name: string, kind: string, destDir: string): { ok: boolean; path: string } {\n    return createScaffold(name, kind, destDir);\n  }\n\n  // ── Contrib (REMOVED 2026-05-12) ───────────────────────────────────────\n  //\n  // The `contribChanges / contribDiff / contribCommit / contribPush /\n  // contribCompare` methods were retired alongside `skaile repo contrib *`.\n  // The refinement push-back workflow is being re-introduced in Phase 4 as\n  // `skaile publish` + `skaile preset push` against the Library Source model.\n\n  // ── History ────────────────────────────────────────────────────────────\n\n  /**\n   * Return recent asset action history entries, newest first.\n   *\n   * @param limit - Maximum number of entries to return. Defaults to `20`.\n   * @returns Array of {@link HistoryEntry} objects in reverse-chronological order.\n   */\n  history(limit = 20): HistoryEntry[] {\n    return getRecentHistory(this.projectDir, limit);\n  }\n\n  /**\n   * Erase all asset action history for this workspace.\n   */\n  clearHistory(): void {\n    clearHistory(this.projectDir);\n  }\n\n  // ── Clean ───────────────────────────────────────────────────────────────\n\n  /**\n   * Remove deployed assets tracked by the lock file and report unmanaged ones.\n   *\n   * With `opts.all`, also deletes `.skaile/history.yaml`, `.skaile/patches/`,\n   * `.skaile/repos/`, and `skaile.lock.yaml` — effectively resetting the workspace\n   * to a pre-install state.\n   *\n   * @param opts - Optional cleanup options.\n   * @param opts.all - When `true`, remove all Skaile-managed state in addition to deployed assets.\n   * @returns Object with `removed` (successfully cleaned refs), `skipped` (with reasons),\n   *   and `unmanaged` (deployed assets not in the lock file).\n   */\n  clean(opts?: { all?: boolean }): {\n    removed: string[];\n    skipped: Array<{ ref: string; reason: string }>;\n    unmanaged: string[];\n  } {\n    const lock = this.tryReadLock();\n    const skipped: Array<{ ref: string; reason: string }> = [];\n\n    const removed = this.cleanLockedDeployedAssets(lock);\n    const unmanaged = this.collectUnmanagedAssets(lock);\n\n    if (opts?.all) this.removeAllManagedState();\n\n    return { removed, skipped, unmanaged };\n  }\n\n  /**\n   * Remove the deployed dir of every asset tracked by the lock; missing dirs\n   * still count as removed. Returns the list of cleaned refs.\n   */\n  private cleanLockedDeployedAssets(lock: LockFile | null): string[] {\n    const removed: string[] = [];\n    if (!lock) return removed;\n    for (const ref of Object.keys(lock.assets)) {\n      const { kind, name } = parseCanonicalLockKey(ref);\n      if (!kind || !name) continue;\n      const dest = deployedDir(\n        kind as AiComponent,\n        name,\n        this.driverTarget,\n        this.global,\n        this.projectDir,\n      );\n\n      try {\n        const stat = lstatSync(dest);\n        if (stat.isSymbolicLink()) unlinkSync(dest);\n        else rmSync(dest, { recursive: true, force: true });\n        removed.push(ref);\n      } catch {\n        // Already gone — count as removed\n        removed.push(ref);\n      }\n    }\n    return removed;\n  }\n\n  /**\n   * Report deployed assets not tracked by the lock file. Deployed assets are\n   * keyed by <kind>:<name>; lock canonical refs are mapped to that shape.\n   */\n  private collectUnmanagedAssets(lock: LockFile | null): string[] {\n    const lockRefs = lock\n      ? new Set(\n          Object.keys(lock.assets).map((r) => {\n            const p = parseCanonicalLockKey(r);\n            return p.kind && p.name ? `${p.kind}:${p.name}` : r;\n          }),\n        )\n      : new Set<string>();\n    const unmanaged: string[] = [];\n    const allDeployed = this.listDeployed();\n    for (const d of allDeployed) {\n      const ref = `${d.kind}:${d.name}`;\n      if (!lockRefs.has(ref)) {\n        unmanaged.push(ref);\n      }\n    }\n    return unmanaged;\n  }\n\n  /** Delete all Skaile-managed state: history file, patches/, repos/, lock. */\n  private removeAllManagedState(): void {\n    // Delete history file\n    const historyFile = join(this.projectDir, \".skaile\", \"history.yaml\");\n    try {\n      unlinkSync(historyFile);\n    } catch {}\n\n    // Remove patches dir\n    try {\n      rmSync(this.patchDir, { recursive: true, force: true });\n    } catch {}\n\n    // Remove repos dir\n    try {\n      rmSync(this.reposDir, { recursive: true, force: true });\n    } catch {}\n\n    // Remove lock file\n    try {\n      unlinkSync(this.lockPath);\n    } catch {}\n  }\n\n  // ── Helpers ────────────────────────────────────────────────────────────\n\n  /** Add a dependency ref to skaile.yaml if not already present. */\n  private addDependencyToConfig(ref: string): void {\n    if (this.global) return; // global installs don't modify skaile.yaml\n    const configPath = join(this.projectDir, \"skaile.yaml\");\n    if (!existsSync(configPath)) return;\n    const raw = parseYaml(readFileSync(configPath, \"utf8\")) ?? {};\n    if (!raw.dependencies) raw.dependencies = [];\n    if (!raw.dependencies.includes(ref)) {\n      raw.dependencies.push(ref);\n      writeFileSync(configPath, stringifyYaml(raw, { lineWidth: 120 }));\n    }\n  }\n\n  /** Remove a dependency ref from skaile.yaml. */\n  private removeDependencyFromConfig(ref: string): void {\n    if (this.global) return;\n    const configPath = join(this.projectDir, \"skaile.yaml\");\n    if (!existsSync(configPath)) return;\n    const raw = parseYaml(readFileSync(configPath, \"utf8\")) ?? {};\n    if (!raw.dependencies) return;\n    const idx = raw.dependencies.indexOf(ref);\n    if (idx !== -1) {\n      raw.dependencies.splice(idx, 1);\n      writeFileSync(configPath, stringifyYaml(raw, { lineWidth: 120 }));\n    }\n  }\n\n  private resolveRepoDir(decl: SourceDeclaration, name: string): string | null {\n    // Check links first\n    const links = readLinks(this.projectDir);\n    if (links[name]) {\n      return existsSync(links[name]) ? links[name] : null;\n    }\n\n    if (decl.path) {\n      const resolved = resolve(this.projectDir, decl.path);\n      return existsSync(resolved) ? resolved : null;\n    }\n\n    // Check project-local symlink, then global cache\n    const dest = join(this.reposDir, name);\n    if (existsSync(dest)) return dest;\n\n    const globalDest = join(getGlobalCacheDir(), name);\n    if (existsSync(join(globalDest, \".git\"))) return globalDest;\n\n    return null;\n  }\n}\n\n// ── Agent install (renders GitAgent packages to framework-native files) ──\n\nexport { installAgent } from \"./install-agent.js\";\n\n// ── Renderers ─────────────────────────────────────────────────────────────\n\nexport type { AgentRenderer, AgentRenderInput, AgentRenderResult } from \"./renderers.js\";\nexport {\n  AGENT_RENDERERS,\n  claudeCodeRenderer,\n  codexRenderer,\n  driverTargetSupportsAgents,\n  ompRenderer,\n} from \"./renderers.js\";\n\n// ── Fragments ─────────────────────────────────────────────────────────────\n\nexport type {\n  AbilityRef,\n  ConnectorRef,\n  ContractRef,\n  FragmentContext,\n  FragmentId,\n} from \"./fragments.js\";\nexport { BUILT_IN_FRAGMENTS, loadPromptExtensions, resolveFragments } from \"./fragments.js\";\n"]}

package/dist/{chunk-Z3XXKR5E.js → chunk-WDMH4UMD.js}

@@ -1,4 +1,4 @@
-import { parseAssetRef } from './chunk-IEJ5IOC3.js';
+import { parseAssetRef } from './chunk-LFDZYCEO.js';
 import { createHash } from 'crypto';
 import { rm, mkdir, writeFile } from 'fs/promises';
 import { resolve, join, sep, dirname, isAbsolute } from 'path';
@@ -40,9 +40,7 @@ async function installFromManifest(opts) {
   const root = resolve(libraryRoot);
   const installPath = resolve(join(root, `@${publisher}`, name, version));
   if (installPath !== root && !installPath.startsWith(root + sep)) {
-    throw new Error(
-      `unsafe install path: ref '${manifest.ref}' resolves outside the library root`
-    );
+    throw new Error(`unsafe install path: ref '${manifest.ref}' resolves outside the library root`);
   }
   for (const f of manifest.files) {
     assertSafeManifestPath(installPath, f.path);
@@ -84,5 +82,5 @@ async function installFromManifest(opts) {
 }
 
 export { installFromManifest };
-//# sourceMappingURL=chunk-Z3XXKR5E.js.map
-//# sourceMappingURL=chunk-Z3XXKR5E.js.map
+//# sourceMappingURL=chunk-WDMH4UMD.js.map
+//# sourceMappingURL=chunk-WDMH4UMD.js.map

package/dist/chunk-WDMH4UMD.js.map

@@ -0,0 +1 @@
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* Pointer-only install path.\n *\n * Given an {@link InstallManifest} (the Pointer Triple the Catalog hands\n * clients), this:\n *\n *   1. fetches the asset bytes directly from the upstream repo at the pinned\n *      commit (via an injectable fetcher, default {@link fetchAssetFilesFromGitHub});\n *   2. verifies EVERY per-file SHA256 against `manifest.files[].sha256`;\n *   3. verifies the composite SHA256 rollup over the sorted\n *      `<path>:<sha256>\\n` lines against `manifest.sha256`;\n *   4. writes the verified bytes under `<libraryRoot>/@<publisher>/<name>/<version>`.\n *\n * Any hash mismatch is a hard failure — bytes are not written if per-file\n * verification fails, and the composite check is the second gate.\n *\n * @docLink packages/library/concepts#install\n */\n\nimport { createHash } from \"node:crypto\";\nimport { mkdir, rm, writeFile } from \"node:fs/promises\";\nimport { dirname, isAbsolute, join, resolve, sep } from \"node:path\";\nimport { parseAssetRef } from \"@skaile/workspaces/core\";\nimport type { InstallManifest } from \"@skaile/workspaces/types\";\n\n/**\n * Validate a single manifest-supplied file path against path traversal.\n *\n * `manifest.files[].path` comes off the network — the attacker controls the\n * entire manifest (and therefore every hash in it), so hash verification can\n * NEVER mitigate a malicious *destination*. A path like\n * `../../../../home/user/.bashrc` or an absolute path would escape\n * `installPath` and yield an arbitrary file write. Every path is checked\n * BEFORE any fetch or write happens; the first bad path aborts the entire\n * install with a hard throw.\n *\n * A path is rejected if ANY of:\n *   - it is empty;\n *   - it is absolute (`path.isAbsolute`) or has a leading slash;\n *   - it contains a `..` segment;\n *   - `path.resolve(installPath, p)` is not `installPath` itself and does not\n *     start with `installPath + path.sep` (escapes the install dir).\n *\n * @throws An error matching `/unsafe path in manifest/` on the first bad path.\n */\nfunction assertSafeManifestPath(installPath: string, p: string): void {\n  const bad = (): never => {\n    throw new Error(`unsafe path in manifest: ${p}`);\n  };\n  if (!p || p.length === 0) bad();\n  if (isAbsolute(p) || p.startsWith(\"/\") || p.startsWith(\"\\\\\")) bad();\n  const segments = p.split(/[/\\\\]/);\n  if (segments.some((s) => s === \"..\")) bad();\n  const resolved = resolve(installPath, p);\n  if (resolved !== installPath && !resolved.startsWith(installPath + sep)) bad();\n}\n\n/**\n * Validate one component (publisher / name / version) of the attacker-controlled\n * `manifest.ref`.\n *\n * `installPath` is built by joining these components onto `libraryRoot`. A\n * component containing a path separator or a `..` / leading-dot segment would\n * let `installPath` itself escape `libraryRoot` — yielding an arbitrary file\n * write AND, via the pre-write `rm(installPath, { recursive })`, an arbitrary\n * recursive delete. The per-file `assertSafeManifestPath` guard cannot catch\n * this: it only validates each `f.path` *relative to* `installPath`, never\n * `installPath` itself. Components must be plain identifier-like strings.\n *\n * @throws An error matching `/unsafe ref/` on a bad component.\n */\nfunction assertSafeRefComponent(kind: string, value: string): void {\n  // Reject empty, leading-dot (covers `.` and `..`), path separators, and\n  // ASCII control characters (NUL et al.) — fails a malformed segment fast\n  // with a domain-specific error rather than a raw EINVAL deeper in.\n  const hasControlChar = [...value].some((c) => c.charCodeAt(0) < 0x20);\n  if (!value || value.startsWith(\".\") || /[/\\\\]/.test(value) || hasControlChar) {\n    throw new Error(`unsafe ref ${kind} component in manifest: '${value}'`);\n  }\n}\n\n/**\n * Fetcher signature — fetches `{ path → Buffer }` for the requested paths at\n * a pinned upstream commit. {@link fetchAssetFilesFromGitHub} is the default\n * production implementation; tests inject a mock.\n */\nexport type AssetFetcher = (opts: {\n  url: string;\n  commitSha: string;\n  paths: string[];\n}) => Promise<Record<string, Buffer>>;\n\n/**\n * Options for {@link installFromManifest}.\n */\nexport interface InstallOpts {\n  /** The pointer-only install manifest from the Catalog. */\n  manifest: InstallManifest;\n  /** Filesystem root the asset is installed under. */\n  libraryRoot: string;\n  /**\n   * Pluggable fetcher so tests can inject mock data. Defaults to\n   * {@link fetchAssetFilesFromGitHub} in production.\n   */\n  fetcher?: AssetFetcher;\n}\n\n/**\n * Result of a successful {@link installFromManifest} call.\n */\nexport interface InstallResult {\n  /** Absolute path the asset files were written to. */\n  installPath: string;\n}\n\n/**\n * Fetch, verify, and write an asset's files per its {@link InstallManifest}.\n *\n * @throws An error matching `/hash mismatch/i` if any per-file SHA256 differs.\n * @throws An error matching `/composite hash mismatch/i` if the rollup differs.\n * @throws An error if the ref is malformed or the fetcher omits a file.\n */\nexport async function installFromManifest(opts: InstallOpts): Promise<InstallResult> {\n  const { manifest, libraryRoot } = opts;\n  const fetcher =\n    opts.fetcher ?? (await import(\"./source-fetch-github.js\")).fetchAssetFilesFromGitHub;\n\n  // 1. Parse ref into install path: `skill:@x/git#1.0.0` → `<root>/@x/git/1.0.0`.\n  // Done first so the C1 path-traversal guard can resolve against installPath\n  // BEFORE any network fetch happens. The ref is attacker-controlled, so each\n  // segment is further validated as a safe path component (H1) after parsing.\n  // `parseAssetRef` is the single canonical grammar (`kind:@publisher/name#version`);\n  // the legacy trailing-`@version` shape was removed in core and is rejected here.\n  let parsed: ReturnType<typeof parseAssetRef>;\n  try {\n    parsed = parseAssetRef(manifest.ref);\n  } catch (e) {\n    throw new Error(`invalid ref: ${manifest.ref}: ${e instanceof Error ? e.message : String(e)}`);\n  }\n  const publisher = parsed.publisher;\n  const name = parsed.name;\n  const version = parsed.pin;\n  if (!publisher) throw new Error(`invalid ref: ${manifest.ref} (missing publisher)`);\n  if (!version) throw new Error(`invalid ref: ${manifest.ref} (missing version pin)`);\n  assertSafeRefComponent(\"publisher\", publisher);\n  assertSafeRefComponent(\"name\", name);\n  assertSafeRefComponent(\"version\", version);\n  const root = resolve(libraryRoot);\n  const installPath = resolve(join(root, `@${publisher}`, name, version));\n  // Defense in depth: even with the segment guards above, assert the built\n  // installPath stays strictly inside libraryRoot before any write or `rm`.\n  if (installPath !== root && !installPath.startsWith(root + sep)) {\n    throw new Error(`unsafe install path: ref '${manifest.ref}' resolves outside the library root`);\n  }\n\n  // 2. [C1] Validate EVERY manifest path against traversal BEFORE fetching.\n  // The attacker controls the manifest (and thus all hashes) — hashes verify\n  // content, never destination. Reject the whole install on the first bad path.\n  for (const f of manifest.files) {\n    assertSafeManifestPath(installPath, f.path);\n  }\n\n  // 3. Fetch all files at the pinned commit.\n  const paths = manifest.files.map((f) => f.path);\n  const bytes = await fetcher({\n    url: manifest.source.url,\n    commitSha: manifest.source.commitSha,\n    paths,\n  });\n\n  // 4. Verify per-file SHA256 — hard fail before writing anything. The path\n  // key used to read from the fetcher result is re-guarded as defense in depth.\n  for (const f of manifest.files) {\n    assertSafeManifestPath(installPath, f.path);\n    const buf = bytes[f.path];\n    if (!buf) throw new Error(`fetcher returned no bytes for ${f.path}`);\n    const actual = createHash(\"sha256\").update(buf).digest(\"hex\");\n    if (actual !== f.sha256) {\n      throw new Error(`hash mismatch for ${f.path}: expected ${f.sha256}, got ${actual}`);\n    }\n  }\n\n  // 5. Verify composite SHA256 over the sorted `<path>:<sha256>\\n` lines.\n  const sortedLines = manifest.files\n    .slice()\n    .sort((a, b) => a.path.localeCompare(b.path))\n    .map((e) => `${e.path}:${e.sha256}\\n`)\n    .join(\"\");\n  const actualComposite = createHash(\"sha256\").update(sortedLines, \"utf-8\").digest(\"hex\");\n  if (actualComposite !== manifest.sha256) {\n    throw new Error(`composite hash mismatch: expected ${manifest.sha256}, got ${actualComposite}`);\n  }\n\n  // 6. [M1] Write all verified files. A failed install must leave NO partial\n  // directory: any prior `installPath` is removed first (clean overwrite), and\n  // a mid-loop write failure removes the partially-written tree before\n  // rethrowing.\n  await rm(installPath, { recursive: true, force: true });\n  try {\n    for (const f of manifest.files) {\n      const target = join(installPath, f.path);\n      await mkdir(dirname(target), { recursive: true });\n      await writeFile(target, bytes[f.path]!);\n    }\n  } catch (e) {\n    await rm(installPath, { recursive: true, force: true }).catch(() => {});\n    throw e;\n  }\n\n  return { installPath };\n}\n"]}

package/dist/{chunk-W7W66MDZ.js → chunk-X46FY45B.js}

@@ -1,9 +1,9 @@
 import { assetSearchDirs } from './chunk-ZAP2BDHG.js';
-import fs from 'fs';
 import * as path from 'path';
 import path__default from 'path';
-import { parse } from 'yaml';
 import * as z from 'zod';
+import fs from 'fs';
+import { parse } from 'yaml';
 
 // factory-assets/connectors/flow/engine/engine.ts
 function skillNodes(flow) {
@@ -162,44 +162,6 @@ function computeSkippable(flow, completedIds) {
     });
   }).map((n) => n.id);
 }
-function loadFlow(filePath) {
-  const raw = fs.readFileSync(filePath, "utf-8");
-  const ext = path__default.extname(filePath).toLowerCase();
-  if (ext === ".yaml" || ext === ".yml") {
-    return parse(raw);
-  }
-  return JSON.parse(raw);
-}
-function loadFlowsFromDir(dirPath) {
-  if (!fs.existsSync(dirPath)) return [];
-  const files = fs.readdirSync(dirPath).filter((f) => {
-    if (f.startsWith("_")) return false;
-    return f.endsWith(".flow.yaml") || f.endsWith(".flow.json") || f.endsWith(".json");
-  });
-  const flows = [];
-  for (const file of files) {
-    try {
-      const def = loadFlow(path__default.join(dirPath, file));
-      if (def.id && def.nodes && def.edges) {
-        flows.push(def);
-      }
-    } catch (err) {
-      process.stderr.write(`[agent-flow-engine] skipping ${file}: ${err.message}
-`);
-    }
-  }
-  return flows;
-}
-function loadAllFlows(aiResourcesRoot) {
-  if (!fs.existsSync(aiResourcesRoot)) return [];
-  const byId = /* @__PURE__ */ new Map();
-  for (const { dir } of assetSearchDirs(aiResourcesRoot, "flows")) {
-    for (const flow of loadFlowsFromDir(dir)) {
-      if (!byId.has(flow.id)) byId.set(flow.id, flow);
-    }
-  }
-  return [...byId.values()];
-}
 var FlowNodeSchema = z.looseObject({
   id: z.string().min(1),
   skill: z.string().optional(),
@@ -246,6 +208,8 @@ function validateFlow(data) {
     }))
   };
 }
+
+// factory-assets/connectors/flow/engine/flow-kind-provider.ts
 var flowKindProvider = {
   kind: "flow",
   displayName: "Flow",
@@ -280,7 +244,45 @@ var flowKindProvider = {
     return edges;
   }
 };
+function loadFlow(filePath) {
+  const raw = fs.readFileSync(filePath, "utf-8");
+  const ext = path__default.extname(filePath).toLowerCase();
+  if (ext === ".yaml" || ext === ".yml") {
+    return parse(raw);
+  }
+  return JSON.parse(raw);
+}
+function loadFlowsFromDir(dirPath) {
+  if (!fs.existsSync(dirPath)) return [];
+  const files = fs.readdirSync(dirPath).filter((f) => {
+    if (f.startsWith("_")) return false;
+    return f.endsWith(".flow.yaml") || f.endsWith(".flow.json") || f.endsWith(".json");
+  });
+  const flows = [];
+  for (const file of files) {
+    try {
+      const def = loadFlow(path__default.join(dirPath, file));
+      if (def.id && def.nodes && def.edges) {
+        flows.push(def);
+      }
+    } catch (err) {
+      process.stderr.write(`[agent-flow-engine] skipping ${file}: ${err.message}
+`);
+    }
+  }
+  return flows;
+}
+function loadAllFlows(aiResourcesRoot) {
+  if (!fs.existsSync(aiResourcesRoot)) return [];
+  const byId = /* @__PURE__ */ new Map();
+  for (const { dir } of assetSearchDirs(aiResourcesRoot, "flows")) {
+    for (const flow of loadFlowsFromDir(dir)) {
+      if (!byId.has(flow.id)) byId.set(flow.id, flow);
+    }
+  }
+  return [...byId.values()];
+}
 
 export { FlowManifestSchema, computeFlowState, computeFlowStateFromSnapshots, computeSkippable, flowKindProvider, isBlocking, loadAllFlows, loadFlow, loadFlowsFromDir, resolveNextNodes, validateFlow };
-//# sourceMappingURL=chunk-W7W66MDZ.js.map
-//# sourceMappingURL=chunk-W7W66MDZ.js.map
+//# sourceMappingURL=chunk-X46FY45B.js.map
+//# sourceMappingURL=chunk-X46FY45B.js.map

package/dist/chunk-X46FY45B.js.map

@@ -0,0 +1 @@
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type {\n  FlowDefinition,\n  FlowEdge,\n  FlowNode,\n  FlowState,\n  NodeExecutionSnapshot,\n  NodeState,\n  NodeStatus,\n} from \"./types.js\";\n\n// ---------------------------------------------------------------------------\n// Core engine — stateless, pure functions\n// ---------------------------------------------------------------------------\n\n/** Return only skill nodes (exclude groups) */\nfunction skillNodes(flow: FlowDefinition): FlowNode[] {\n  return flow.nodes.filter((n) => n.type === \"skill\");\n}\n\n/** Build adjacency: target → sources[] (incoming edges per node) */\nfunction buildIncoming(edges: FlowEdge[]): Map<string, FlowEdge[]> {\n  const map = new Map<string, FlowEdge[]>();\n  for (const edge of edges) {\n    if (!map.has(edge.target)) map.set(edge.target, []);\n    map.get(edge.target)!.push(edge);\n  }\n  return map;\n}\n\n/** Build adjacency: source → targets[] (outgoing edges per node) */\nfunction buildOutgoing(edges: FlowEdge[]): Map<string, FlowEdge[]> {\n  const map = new Map<string, FlowEdge[]>();\n  for (const edge of edges) {\n    if (!map.has(edge.source)) map.set(edge.source, []);\n    map.get(edge.source)!.push(edge);\n  }\n  return map;\n}\n\n/**\n * Compute the full {@link FlowState} from a flow definition and caller-supplied node ID sets.\n *\n * This is the primary engine function. It is stateless and side-effect-free — calling it\n * twice with the same arguments always returns an equivalent result.\n *\n * Edge semantics applied during computation:\n * - `'flow'`     — hard dependency: target cannot start until source is `complete` or `skipped`.\n * - `'parallel'` — soft dependency: target may run while source is still running.\n * - `'optional'` — advisory: target can start regardless of source state.\n *\n * A node is `available` when every incoming `'flow'`-type edge has a complete or skipped source.\n * A node is `not_started` when at least one hard predecessor is still pending.\n * The flow is `done` when every non-optional node is `complete` or `skipped`.\n *\n * Prefer {@link computeFlowStateFromSnapshots} for callers that track full `NodeExecution`\n * state (interaction statuses such as `awaiting_approval`, `awaiting_input`, `failed`).\n *\n * @param flow - The parsed flow definition.\n * @param completedIds - Set of node IDs that have finished successfully.\n * @param runningIds - Set of node IDs currently executing. Defaults to an empty set.\n * @param skippedIds - Set of node IDs that were explicitly skipped. Skipped nodes count\n *   as satisfied for downstream dependency checks. Defaults to an empty set.\n * @returns A {@link FlowState} describing the current status of every skill node.\n * @docLink packages/flow-engine/concepts#compute-flow-state\n */\nexport function computeFlowState(\n  flow: FlowDefinition,\n  completedIds: Set<string>,\n  runningIds: Set<string> = new Set(),\n  skippedIds: Set<string> = new Set(),\n): FlowState {\n  const nodes = skillNodes(flow);\n  const incoming = buildIncoming(flow.edges);\n\n  const nodeStates: NodeState[] = nodes.map((node) => {\n    const optional = node.data?.optional ?? false;\n    const skillId = node.data?.skill ?? node.id;\n    const label = node.data?.label ?? skillId;\n\n    if (completedIds.has(node.id)) {\n      return {\n        nodeId: node.id,\n        skillId,\n        label,\n        status: \"complete\",\n        optional,\n        canRun: false,\n        blockers: [],\n      };\n    }\n    if (runningIds.has(node.id)) {\n      return {\n        nodeId: node.id,\n        skillId,\n        label,\n        status: \"running\",\n        optional,\n        canRun: false,\n        blockers: [],\n      };\n    }\n    if (skippedIds.has(node.id)) {\n      return {\n        nodeId: node.id,\n        skillId,\n        label,\n        status: \"skipped\",\n        optional,\n        canRun: false,\n        blockers: [],\n      };\n    }\n\n    const edges = incoming.get(node.id) ?? [];\n\n    // Hard blockers: flow-type edges whose source is neither complete nor skipped\n    const hardBlockers = edges\n      .filter((e) => e.type === \"flow\")\n      .filter((e) => !completedIds.has(e.source) && !skippedIds.has(e.source))\n      .map((e) => e.source);\n\n    const canRun = hardBlockers.length === 0;\n\n    let status: NodeStatus;\n    if (!canRun) {\n      status = \"not_started\";\n    } else {\n      status = \"available\";\n    }\n\n    return { nodeId: node.id, skillId, label, status, optional, canRun, blockers: hardBlockers };\n  });\n\n  const _stateMap = new Map(nodeStates.map((s) => [s.nodeId, s]));\n\n  const available = nodeStates.filter((s) => s.status === \"available\").map((s) => s.nodeId);\n  const completed = nodeStates.filter((s) => s.status === \"complete\").map((s) => s.nodeId);\n  const focus = nodeStates\n    .filter(\n      (s) =>\n        s.status === \"running\" || s.status === \"awaiting_approval\" || s.status === \"awaiting_input\",\n    )\n    .map((s) => s.nodeId);\n\n  // Flow is done when all required nodes are complete or skipped\n  const requiredNodes = nodes.filter((n) => !(n.data?.optional ?? false));\n  const done = requiredNodes.every((n) => completedIds.has(n.id) || skippedIds.has(n.id));\n\n  return { flowId: flow.id, nodes: nodeStates, available, completed, focus, done };\n}\n\n/**\n * Snapshot-based variant of {@link computeFlowState}.\n *\n * Accepts a map of `NodeExecutionSnapshot` values carrying the current status and\n * interaction metadata for every node the caller knows about. Nodes absent from the\n * map are treated as `not_started`.\n *\n * This is the preferred API for the turn-based runner, which has a full `FlowExecution`\n * and needs to convey richer statuses (`awaiting_approval`, `awaiting_input`, `failed`)\n * back to the engine so downstream availability is computed correctly.\n *\n * Engine semantics:\n * - A node is `available` when all its incoming `'flow'`-type predecessors are `complete`\n *   or `skipped`. Any other upstream status — including `awaiting_approval`,\n *   `awaiting_input`, and `failed` — is treated as blocking.\n * - A `failed` optional node does **not** block its dependents.\n * - The flow is `done` when every non-optional node is `complete` or `skipped`. A single\n *   required node stuck in `failed` keeps `done` false.\n *\n * @param flow - The parsed flow definition.\n * @param snapshots - Map from node ID to its current {@link NodeExecutionSnapshot}.\n *   Missing entries default to `not_started` with no interaction metadata.\n * @returns A {@link FlowState} describing the current status of every skill node,\n *   including interaction fields (`approval`, `input`, `output`, `error`) copied\n *   from the matching snapshot.\n * @docLink packages/flow-engine/concepts#compute-flow-state-from-snapshots\n */\nexport function computeFlowStateFromSnapshots(\n  flow: FlowDefinition,\n  snapshots: Map<string, NodeExecutionSnapshot>,\n): FlowState {\n  const nodes = skillNodes(flow);\n  const incoming = buildIncoming(flow.edges);\n\n  /** Resolve the effective status for a node — defaulting to `not_started`. */\n  const statusFor = (nodeId: string): NodeStatus => snapshots.get(nodeId)?.status ?? \"not_started\";\n\n  /** A predecessor \"passes\" when it is complete or skipped. */\n  const passed = (nodeId: string): boolean => {\n    const s = statusFor(nodeId);\n    return s === \"complete\" || s === \"skipped\";\n  };\n\n  const nodeStates: NodeState[] = nodes.map((node) => {\n    const snapshot = snapshots.get(node.id);\n    const optional = node.data?.optional ?? false;\n    const skillId = node.data?.skill ?? node.id;\n    const label = node.data?.label ?? skillId;\n    const status = snapshot?.status ?? \"not_started\";\n\n    const edges = incoming.get(node.id) ?? [];\n    const flowPreds = edges.filter((e) => e.type === \"flow\");\n    const hardBlockers = flowPreds.filter((e) => !passed(e.source)).map((e) => e.source);\n\n    // For `not_started` nodes, elevate to `available` once blockers clear.\n    let effectiveStatus: NodeStatus = status;\n    if (status === \"not_started\" && hardBlockers.length === 0) {\n      effectiveStatus = \"available\";\n    }\n\n    return {\n      nodeId: node.id,\n      skillId,\n      label,\n      status: effectiveStatus,\n      optional,\n      canRun: hardBlockers.length === 0 && effectiveStatus === \"available\",\n      blockers: hardBlockers,\n      approval: snapshot?.approval,\n      input: snapshot?.input,\n      output: snapshot?.output,\n      error: snapshot?.error,\n    };\n  });\n\n  const available = nodeStates.filter((s) => s.status === \"available\").map((s) => s.nodeId);\n  const completed = nodeStates.filter((s) => s.status === \"complete\").map((s) => s.nodeId);\n  const focus = nodeStates\n    .filter(\n      (s) =>\n        s.status === \"running\" || s.status === \"awaiting_approval\" || s.status === \"awaiting_input\",\n    )\n    .map((s) => s.nodeId);\n\n  const requiredNodes = nodes.filter((n) => !(n.data?.optional ?? false));\n  const done = requiredNodes.every((n) => {\n    const s = statusFor(n.id);\n    return s === \"complete\" || s === \"skipped\";\n  });\n\n  return { flowId: flow.id, nodes: nodeStates, available, completed, focus, done };\n}\n\n/**\n * Returns `true` when the given status prevents downstream nodes from starting.\n *\n * Only `'complete'` and `'skipped'` satisfy a hard (`'flow'`-type) edge dependency.\n * All other statuses — including `'awaiting_approval'`, `'awaiting_input'`, and\n * `'failed'` — are considered blocking.\n *\n * Use this helper in the FlowAdapter and the turn-based orchestrator instead of\n * hard-coding the two-value whitelist inline.\n *\n * @param status - The {@link NodeStatus} to evaluate.\n * @returns `true` if the status prevents dependents from becoming `available`.\n * @docLink packages/flow-engine/concepts#is-blocking\n */\nexport function isBlocking(status: NodeStatus): boolean {\n  return status !== \"complete\" && status !== \"skipped\";\n}\n\n/**\n * Returns the IDs of nodes that become newly `available` after a specific node completes.\n *\n * More efficient than recomputing the full {@link FlowState} when only the downstream\n * impact of a single completion is needed. Only the direct successors of `justCompleted`\n * are evaluated — the rest of the graph is untouched.\n *\n * @param flow - The parsed flow definition.\n * @param justCompleted - ID of the node that just finished (will be added to the\n *   effective completed set before evaluating successors).\n * @param completedIds - Set of node IDs already known to be complete before this call.\n * @param skippedIds - Set of node IDs that were explicitly skipped. Defaults to an empty set.\n * @returns Array of node IDs whose hard dependencies are now fully satisfied and that\n *   were not already available before `justCompleted` finished.\n * @docLink packages/flow-engine/concepts#resolve-next-nodes\n */\nexport function resolveNextNodes(\n  flow: FlowDefinition,\n  justCompleted: string,\n  completedIds: Set<string>,\n  skippedIds: Set<string> = new Set(),\n): string[] {\n  const outgoing = buildOutgoing(flow.edges);\n  const incoming = buildIncoming(flow.edges);\n  const candidates = (outgoing.get(justCompleted) ?? []).map((e) => e.target);\n\n  const nextCompleted = new Set([...completedIds, justCompleted]);\n  const result: string[] = [];\n\n  for (const candidateId of candidates) {\n    const edges = incoming.get(candidateId) ?? [];\n    const hardBlockers = edges\n      .filter((e) => e.type === \"flow\")\n      .filter((e) => !nextCompleted.has(e.source) && !skippedIds.has(e.source));\n    if (hardBlockers.length === 0) {\n      result.push(candidateId);\n    }\n  }\n\n  return result;\n}\n\n/**\n * Returns the IDs of optional nodes that have not yet started and can be safely skipped.\n *\n * A node is skippable when it is:\n * 1. Not yet complete (absent from `completedIds`).\n * 2. Marked `optional` (`FlowNode.data.optional === true`).\n * 3. Not connected via a `'flow'`-type edge to any non-optional downstream node\n *    (i.e. skipping it cannot starve a required node of a hard dependency).\n *\n * The runner may call this to present the user with a list of nodes they can bypass\n * without breaking the flow's required path.\n *\n * @param flow - The parsed flow definition.\n * @param completedIds - Set of node IDs that have already completed (excluded from results).\n * @returns Array of node IDs that are safe to skip at this point in the execution.\n * @docLink packages/flow-engine/concepts#compute-skippable\n */\nexport function computeSkippable(flow: FlowDefinition, completedIds: Set<string>): string[] {\n  const nodes = skillNodes(flow);\n  const outgoing = buildOutgoing(flow.edges);\n\n  return nodes\n    .filter((n) => !completedIds.has(n.id))\n    .filter((n) => n.data?.optional ?? false)\n    .filter((n) => {\n      // A node is skippable if none of its outgoing flow-type edges go to a required node\n      const deps = (outgoing.get(n.id) ?? []).filter((e) => e.type === \"flow\");\n      return deps.every((e) => {\n        const target = flow.nodes.find((t) => t.id === e.target);\n        return target?.data?.optional ?? false;\n      });\n    })\n    .map((n) => n.id);\n}\n","/**\n * Flow manifest schema and validation.\n *\n * Moved from @skaile/workspaces/types/manifests/flow.ts in Phase 1.7.3.\n * This is now the canonical location for flow manifest validation.\n */\n\nimport * as z from \"zod\";\n\n// ---------------------------------------------------------------------------\n// Validation result (inline — avoids importing from types/manifests/_shared)\n// ---------------------------------------------------------------------------\n\nexport interface ManifestValidationSuccess<T> {\n  ok: true;\n  data: T;\n}\n\nexport interface ManifestValidationFailure {\n  ok: false;\n  errors: Array<{ path: string; message: string }>;\n}\n\nexport type ManifestValidationResult<T> = ManifestValidationSuccess<T> | ManifestValidationFailure;\n\n// ---------------------------------------------------------------------------\n// Schema\n// ---------------------------------------------------------------------------\n\nconst FlowNodeSchema = z.looseObject({\n  id: z.string().min(1),\n  skill: z.string().optional(),\n  type: z.string().optional(),\n  label: z.string().optional(),\n  description: z.string().optional(),\n});\n\nconst FlowEdgeSchema = z.looseObject({\n  id: z.string().optional(),\n  source: z.string().min(1),\n  target: z.string().min(1),\n  condition: z.string().optional(),\n});\n\nexport const FlowManifestSchema = z.looseObject({\n  id: z.string().min(1),\n  version: z.string().optional(),\n  name: z.string().min(1),\n  description: z.string().optional(),\n  metadata: z\n    .looseObject({\n      tags: z.array(z.string()).optional(),\n      stage: z.string().optional(),\n      icon: z.string().optional(),\n      category: z.string().optional(),\n      onboarding: z.record(z.string(), z.unknown()).optional(),\n    })\n    .optional(),\n  globals: z.record(z.string(), z.unknown()).optional(),\n  modes: z.record(z.string(), z.unknown()).optional(),\n  tier_presets: z.record(z.string(), z.record(z.string(), z.unknown())).optional(),\n  artifact_handoff: z.unknown().optional(),\n  entry: z.string().optional(),\n  nodes: z.array(FlowNodeSchema).optional(),\n  edges: z.array(FlowEdgeSchema).optional(),\n});\n\nexport type FlowManifest = z.infer<typeof FlowManifestSchema>;\n\n// ---------------------------------------------------------------------------\n// Validation\n// ---------------------------------------------------------------------------\n\nexport function validateFlow(data: unknown): ManifestValidationResult<FlowManifest> {\n  const result = FlowManifestSchema.safeParse(data);\n  if (result.success) {\n    return { ok: true, data: result.data };\n  }\n  return {\n    ok: false,\n    errors: result.error.issues.map((issue) => ({\n      path: issue.path.join(\".\"),\n      message: issue.message,\n    })),\n  };\n}\n","/**\n * Flow asset kind provider.\n *\n * Exported from @skaile/workspaces/factory-assets/connectors/flow/engine for explicit registration\n * by the CLI at bootstrap. Discovery does NOT auto-include this provider\n * (discovery must stay a leaf — no flow-engine imports).\n *\n * Implements IAssetKindProvider with flow-specific:\n * - Discovery patterns: *.flow.yaml, *.flow.json\n * - Manifest validation via FlowManifestSchema\n * - Requires extraction: nodes[].skill references\n * - File filter: just the manifest file (flows are single-file)\n */\n\nimport * as path from \"node:path\";\nimport type {\n  AssetKindFileFilter,\n  AssetKindRequiresEdge,\n  IAssetKindProvider,\n} from \"@skaile/workspaces/plugins\";\nimport { validateFlow } from \"./flow-manifest.js\";\n\n// ---------------------------------------------------------------------------\n// Provider\n// ---------------------------------------------------------------------------\n\nexport const flowKindProvider: IAssetKindProvider = {\n  kind: \"flow\",\n  displayName: \"Flow\",\n  providerVersion: \"1.0.0\",\n  discoveryPatterns: [\"**/*.flow.yaml\", \"**/*.flow.json\"],\n\n  matchesPath(relativePath: string): boolean {\n    return relativePath.endsWith(\".flow.yaml\") || relativePath.endsWith(\".flow.json\");\n  },\n\n  validateManifest(data: unknown) {\n    return validateFlow(data);\n  },\n\n  defaultFileFilter(manifestPath: string): AssetKindFileFilter {\n    return {\n      assetRoot: path.dirname(manifestPath),\n      files: [path.basename(manifestPath)],\n    };\n  },\n\n  extractRequires(assetRef: string, manifest: Record<string, unknown>): AssetKindRequiresEdge[] {\n    const edges: AssetKindRequiresEdge[] = [];\n\n    // Extract skill references from nodes[].skill\n    const nodes = manifest.nodes;\n    if (Array.isArray(nodes)) {\n      for (const node of nodes) {\n        if (\n          typeof node === \"object\" &&\n          node !== null &&\n          \"skill\" in node &&\n          typeof (node as Record<string, unknown>).skill === \"string\"\n        ) {\n          edges.push({\n            from: assetRef,\n            to: (node as Record<string, unknown>).skill as string,\n            field: \"nodes[].skill\",\n          });\n        }\n      }\n    }\n\n    return edges;\n  },\n};\n","import fs from \"node:fs\";\nimport path from \"node:path\";\nimport { assetSearchDirs } from \"@skaile/workspaces/core\";\nimport { parse as parseYaml } from \"yaml\";\nimport type { FlowDefinition } from \"./types.js\";\n\n/**\n * Load a single {@link FlowDefinition} from a YAML or JSON file on disk.\n *\n * Format detection is based on file extension:\n * - `.yaml` / `.yml` — parsed with the `yaml` library.\n * - Everything else  — parsed as JSON.\n *\n * @param filePath - Absolute path to the flow file.\n * @returns The parsed {@link FlowDefinition}.\n * @throws {Error} If the file does not exist, cannot be read, or fails to parse.\n * @docLink packages/flow-engine/concepts#flow-loading\n */\nexport function loadFlow(filePath: string): FlowDefinition {\n  const raw = fs.readFileSync(filePath, \"utf-8\");\n  const ext = path.extname(filePath).toLowerCase();\n  if (ext === \".yaml\" || ext === \".yml\") {\n    return parseYaml(raw) as FlowDefinition;\n  }\n  return JSON.parse(raw) as FlowDefinition;\n}\n\n/**\n * Load all `*.flow.yaml` and legacy `*.flow.json` / `*.json` flow files from a directory.\n *\n * Files that fail to parse are skipped with a warning written to `stderr` — they do not\n * cause the function to throw. Files whose name starts with `_` are skipped entirely\n * (treated as drafts or disabled flows). Files missing the required `id`, `nodes`, or\n * `edges` fields are also discarded silently.\n *\n * @param dirPath - Absolute path to the directory to scan.\n * @returns Array of successfully parsed {@link FlowDefinition} objects. Empty if the\n *   directory does not exist or contains no valid flow files.\n * @docLink packages/flow-engine/concepts#flow-loading\n */\nexport function loadFlowsFromDir(dirPath: string): FlowDefinition[] {\n  if (!fs.existsSync(dirPath)) return [];\n\n  const files = fs.readdirSync(dirPath).filter((f) => {\n    if (f.startsWith(\"_\")) return false;\n    return f.endsWith(\".flow.yaml\") || f.endsWith(\".flow.json\") || f.endsWith(\".json\");\n  });\n\n  const flows: FlowDefinition[] = [];\n\n  for (const file of files) {\n    try {\n      const def = loadFlow(path.join(dirPath, file));\n      if (def.id && def.nodes && def.edges) {\n        flows.push(def);\n      }\n    } catch (err) {\n      process.stderr.write(`[agent-flow-engine] skipping ${file}: ${(err as Error).message}\\n`);\n    }\n  }\n\n  return flows;\n}\n\n/**\n * Discover and load all flow definitions from every domain under an `ai-assets` root.\n *\n * Walks the top-level subdirectories of `aiResourcesRoot`, looks for a `flows/`\n * subdirectory inside each domain, and delegates to {@link loadFlowsFromDir} for\n * each one found. Files prefixed with `_` are skipped (draft/disabled).\n *\n * @param aiResourcesRoot - Absolute path to the `ai-assets/` directory (or equivalent\n *   resource root). Typically the `ai-assets/` folder at the monorepo root.\n * @returns Flat array of all successfully parsed {@link FlowDefinition} objects across\n *   all domains. Empty if the root directory does not exist.\n * @docLink packages/flow-engine/concepts#flow-loading\n */\nexport function loadAllFlows(aiResourcesRoot: string): FlowDefinition[] {\n  if (!fs.existsSync(aiResourcesRoot)) return [];\n\n  // `assetSearchDirs` covers both the flat (`<root>/flows/`) and domain-nested\n  // (`<root>/<domain>/flows/`) layouts via the one shared layout primitive.\n  // De-dupe by id (first dir wins) so a root that happens to define a flow in\n  // both layouts surfaces it once.\n  const byId = new Map<string, FlowDefinition>();\n  for (const { dir } of assetSearchDirs(aiResourcesRoot, \"flows\")) {\n    for (const flow of loadFlowsFromDir(dir)) {\n      if (!byId.has(flow.id)) byId.set(flow.id, flow);\n    }\n  }\n  return [...byId.values()];\n}\n"]}

package/dist/{chunk-JKNWJ64A.js → chunk-XGCXFX7X.js}

@@ -27,5 +27,5 @@ function isDeployed(kind, name, target, globalInstall, cwd) {
 }
 
 export { deployedBase, deployedDir, isDeployed };
-//# sourceMappingURL=chunk-JKNWJ64A.js.map
-//# sourceMappingURL=chunk-JKNWJ64A.js.map
+//# sourceMappingURL=chunk-XGCXFX7X.js.map
+//# sourceMappingURL=chunk-XGCXFX7X.js.map

package/dist/{chunk-JKNWJ64A.js.map → chunk-XGCXFX7X.js.map}

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