@skaile/workspaces 0.22.0 → 0.24.0

package/dist/chunk-7HSXUKNB.js.map

@@ -1 +0,0 @@
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* @skaile/asset-manager — programmatic AI asset management API.\n *\n * Manages project-local repositories, dependency resolution, deployment,\n * lock files, patches, and contribution workflows.\n *\n * Usage:\n *   import { AssetManager } from \"@skaile/workspaces/asset-manager\"\n *   const am = new AssetManager({ projectDir: \"/path/to/project\" })\n *   await am.install()\n */\n\nimport { spawnSync } from \"node:child_process\";\nimport {\n  existsSync,\n  lstatSync,\n  readFileSync,\n  readdirSync,\n  rmSync,\n  unlinkSync,\n  writeFileSync,\n} from \"node:fs\";\nimport { homedir } from \"node:os\";\nimport { dirname, join, resolve } from \"node:path\";\nimport { parse as parseYaml, stringify as stringifyYaml } from \"yaml\";\nimport type {\n  AiComponent,\n  CatalogEntry,\n  LockFile,\n  OverrideEntry,\n  ProvenanceCandidate,\n  SkWorkspaceConfig,\n  SourceClone,\n  SourceDeclaration,\n  SourceEntry,\n  StoreEntry,\n  StoreFetcher,\n} from \"@skaile/workspaces/core\";\nimport type { DriverTarget } from \"@skaile/workspaces/core\";\nimport {\n  buildProvenanceIndex,\n  deployedBase,\n  deployedDir,\n  getRepoCommit,\n  isDeployed,\n  parseAssetRef,\n  resolveRuntimeAssets,\n  resolveSkWorkspaceConfig,\n} from \"@skaile/workspaces/core\";\nimport { buildLockFile, readLock, verifyLock, writeLock } from \"@skaile/workspaces/core\";\nimport {\n  checkRepoStatus,\n  ensureRepo,\n  getGlobalCacheDir,\n  readLinks,\n  resolveAll,\n  resolveAsset,\n  scanRepo,\n} from \"@skaile/workspaces/core\";\nimport {\n  extractForPatch,\n  generatePatch,\n  savePatch,\n  applyPatch as coreApplyPatch,\n} from \"@skaile/workspaces/core\";\nimport type { DeployOptions } from \"./installer.js\";\nimport { createScaffold, deployAll, removeAsset } from \"./installer.js\";\nimport type { HistoryEntry } from \"./history.js\";\nimport { appendHistory, clearHistory, getRecentHistory } from \"./history.js\";\nimport { commitChanges } from \"./contrib.js\";\n\n/** Derive a cache slug from a source git URL (`<host>/<owner>/<repo>` → `<repo>`). */\nfunction sourceSlug(url: string): string {\n  return (\n    url\n      .replace(/\\.git$/, \"\")\n      .split(/[/:]/)\n      .pop() ?? \"source\"\n  );\n}\n\n/**\n * Parse a v2 canonical lock key (`<publisher>/<kind>:<name>@<version>`) into its\n * parts. Returns empty fields when the key is malformed.\n */\nfunction parseCanonicalLockKey(key: string): {\n  publisher?: string;\n  kind?: string;\n  name?: string;\n  version?: string;\n} {\n  // <publisher>/<kind>:<name>@<version>\n  const slash = key.indexOf(\"/\");\n  const colon = key.indexOf(\":\", slash + 1);\n  const at = key.lastIndexOf(\"@\");\n  if (slash === -1 || colon === -1 || at === -1 || at < colon) return {};\n  return {\n    publisher: key.slice(0, slash),\n    kind: key.slice(slash + 1, colon),\n    name: key.slice(colon + 1, at),\n    version: key.slice(at + 1),\n  };\n}\n\n// Re-export sub-modules\nexport type { DeployOptions } from \"./installer.js\";\nexport type { Log } from \"./renderers.js\";\nexport type { HistoryEntry } from \"./history.js\";\nexport { createScaffold, deployAll, removeAsset } from \"./installer.js\";\nexport { renderAgentToFramework } from \"./renderers.js\";\nexport {\n  appendHistory,\n  clearHistory,\n  getRecentHistory,\n  loadHistory,\n} from \"./history.js\";\n// Contrib helpers (commitChanges et al.) are still used internally by the\n// patch-submit flow but are no longer part of the public API surface — the\n// `skaile repo contrib *` command tree was removed on 2026-05-12.\n\n// ── Types ────────────────────────────────────────────────────────────────────\n\n/**\n * Metadata about a repository declared in `skaile.yaml`.\n *\n * @docLink packages/asset-manager/concepts#asset-manager\n */\nexport interface RepoInfo {\n  /** Repository name as declared in `skaile.yaml`. */\n  name: string;\n  /** How the repo is sourced: cloned from a URL, mounted from a local path, or symlinked via `skaile repo link`. */\n  kind: \"local\" | \"remote\" | \"linked\";\n  /** Remote URL (present when `kind === \"remote\"`). */\n  url?: string;\n  /** Filesystem path (present when `kind === \"local\"` or `kind === \"linked\"`). */\n  path?: string;\n  /** Git branch configured for this repository. */\n  branch: string;\n  /** Whether the repository has been cloned/resolved locally. */\n  cloned: boolean;\n}\n\n/**\n * Live sync status for a repository.\n *\n * @docLink packages/asset-manager/concepts#asset-manager\n */\nexport interface RepoStatusInfo {\n  /** Repository name as declared in `skaile.yaml`. */\n  name: string;\n  /** How the repo is sourced. */\n  kind: \"local\" | \"remote\" | \"linked\";\n  /** Number of commits the local clone is behind the remote. */\n  behind: number;\n  /** `true` when the local clone matches the remote HEAD. */\n  upToDate: boolean;\n  /** Error message when status check failed. */\n  error?: string;\n}\n\n/**\n * Result of a full `skaile install` or `skaile add` run.\n *\n * @docLink packages/asset-manager/concepts#asset-manager\n */\nexport interface InstallResult {\n  /** Asset refs (`kind:name`) successfully deployed in this run. */\n  deployed: string[];\n  /** Asset refs (`kind:name`) removed because they are no longer in the resolved set. */\n  removed: string[];\n  /** Asset refs that could not be resolved in any configured repository. */\n  missing: string[];\n  /** Whether `skaile.lock.yaml` was written or updated. */\n  lockWritten: boolean;\n  /**\n   * npm packages installed as a side effect of resolving runtime asset peer\n   * deps (connectors / mounts declared in skaile.yaml). Empty when nothing\n   * needed installing or when the runtime-deps step was skipped.\n   */\n  npmInstalled?: string[];\n  /**\n   * npm packages that the runtime-deps step tried but failed to install.\n   * Non-fatal — listed for telemetry and CLI reporting.\n   */\n  npmFailed?: string[];\n}\n\n/**\n * An installed asset whose source repository is behind the remote.\n *\n * @docLink packages/asset-manager/concepts#asset-manager\n */\nexport interface OutdatedEntry {\n  /** Asset kind (`skill`, `agent`, `prompt`, `flow`, `contract`). */\n  kind: string;\n  /** Asset name as registered in the catalog. */\n  name: string;\n  /** Repository that provides this asset. */\n  publisher: string;\n  /** Version string recorded in the lock file at install time. */\n  currentVersion: string;\n  /** Number of commits the local repository is behind the remote. */\n  behind: number;\n}\n\n/**\n * A node in the resolved dependency tree (returned by `AssetManager.tree()`).\n *\n * @docLink packages/asset-manager/concepts#asset-manager\n */\nexport interface DependencyNode {\n  /** Asset ref (`kind:name`) or `\"project\"` for the root node. */\n  ref: string;\n  /** Transitive dependencies resolved by this node. */\n  children: DependencyNode[];\n}\n\n/**\n * A missing dependency detected by `AssetManager.doctor()`.\n *\n * @docLink packages/asset-manager/concepts#asset-manager\n */\nexport interface DepIssue {\n  /** Kind of the asset that has the unsatisfied requirement. */\n  assetKind: string;\n  /** Name of the asset that has the unsatisfied requirement. */\n  assetName: string;\n  /** Kind of the missing dependency. */\n  depKind: string;\n  /** Name of the missing dependency. */\n  depName: string;\n  /** `true` when the missing dependency exists in a configured repository but has not been installed. */\n  inRepos: boolean;\n}\n\n/**\n * A single deployed asset shown in the workspace overview.\n *\n * @docLink packages/asset-manager/concepts#asset-manager\n */\nexport interface OverviewEntry {\n  /** Asset kind (`skill`, `agent`, `prompt`, `flow`, `contract`). */\n  kind: string;\n  /** Asset name. */\n  name: string;\n  /** Domain the asset belongs to (from the lock file; `\"unknown\"` when unresolvable). */\n  domain: string;\n  /** Repository that provides this asset. */\n  publisher: string;\n  /** Version string from the lock file. */\n  version: string;\n  /**\n   * Sync status relative to the source repository.\n   * - `\"synced\"` — local clone matches remote HEAD\n   * - `\"outdated\"` — local clone is behind the remote\n   * - `\"local\"` — sourced from a local path, no remote to compare\n   * - `\"error\"` — status check failed\n   * - `\"unknown\"` — repository not found or lock entry missing\n   */\n  syncStatus: string;\n}\n\n/**\n * Aggregated workspace overview returned by `AssetManager.overview()`.\n *\n * @docLink packages/asset-manager/concepts#asset-manager\n */\nexport interface OverviewResult {\n  /** Entries grouped by domain, sorted alphabetically. Each group is sorted by kind then name. */\n  byDomain: Map<string, OverviewEntry[]>;\n  /** Total number of deployed assets. */\n  total: number;\n  /** Sync status for each configured repository. */\n  repos: RepoStatusInfo[];\n}\n\n// ── AssetManager ─────────────────────────────────────────────────────────────\n\n/**\n * Options for constructing an {@link AssetManager}.\n *\n * @docLink packages/asset-manager/concepts#asset-manager\n */\nexport interface AssetManagerOptions {\n  /** Absolute or relative path to the workspace root (must contain `skaile.yaml`). */\n  projectDir: string;\n  /**\n   * Agent framework to target for asset deployment.\n   * Determines which framework directories (``.claude/``, ``.omp/``, etc.) are used.\n   * Defaults to `\"claude-code\"`.\n   */\n  driverTarget?: DriverTarget;\n  /**\n   * When `true`, assets are installed into the global Skaile cache rather than the\n   * project workspace. Skips `skaile.yaml` dependency updates.\n   */\n  global?: boolean;\n}\n\n/**\n * Programmatic API for managing AI assets in a Skaile workspace.\n *\n * `AssetManager` wraps repository management, catalog search, asset installation,\n * lock-file tracking, patch workflows, and workspace diagnostics. The CLI delegates\n * all `skaile catalog`, `skaile repo`, `skaile install`, `skaile add`, and\n * `skaile init` commands to this class.\n *\n * @example\n * ```typescript\n * import { AssetManager } from \"@skaile/workspaces/asset-manager\";\n *\n * const am = new AssetManager({ projectDir: \"/my-project\" });\n *\n * // Install all dependencies declared in skaile.yaml\n * const result = await am.install();\n * console.log(`Deployed: ${result.deployed.join(\", \")}`);\n *\n * // Add a single skill (resolves transitive deps, updates skaile.yaml)\n * const deployed = am.add(\"skill:my-skill\");\n *\n * // Search the catalog\n * const skills = am.search(\"code review\", \"skill\");\n * ```\n *\n * @docLink packages/asset-manager/concepts#asset-manager\n */\nexport class AssetManager {\n  /** Resolved absolute path to the workspace root. */\n  readonly projectDir: string;\n  /** Agent framework driver target used for all deploy operations. */\n  readonly driverTarget: DriverTarget;\n  /** Whether this instance operates in global-install mode. */\n  readonly global: boolean;\n\n  constructor(opts: AssetManagerOptions) {\n    this.projectDir = resolve(opts.projectDir);\n    this.driverTarget = opts.driverTarget ?? (\"claude-code\" as DriverTarget);\n    this.global = opts.global ?? false;\n  }\n\n  private get reposDir(): string {\n    return join(this.projectDir, \".skaile\", \"repos\");\n  }\n\n  private get lockPath(): string {\n    return join(this.projectDir, \"skaile.lock.yaml\");\n  }\n\n  private get patchDir(): string {\n    return join(this.projectDir, \".skaile\", \"patches\");\n  }\n\n  private get deployOpts(): DeployOptions {\n    return { driverTarget: this.driverTarget, global: this.global, cwd: this.projectDir };\n  }\n\n  private loadConfig(): {\n    repositories: Record<string, SourceDeclaration>;\n    sources: SourceEntry[];\n    stores: StoreEntry[];\n    dependencies: string[];\n    overrides: OverrideEntry[];\n    patches: Record<string, string>;\n    config: SkWorkspaceConfig;\n  } {\n    // resolveSkWorkspaceConfig runs the canonical normalizer and throws on\n    // legacy keys (`repositories:` / `ai_resources:`) — propagate to the caller.\n    const config = resolveSkWorkspaceConfig(this.projectDir);\n\n    const sources = config.sources ?? [];\n    const stores = config.stores ?? [];\n    const dependencies = config.dependencies ?? [];\n    const overrides = config.overrides ?? [];\n    const patches = config.patches ?? {};\n\n    // Internal install-pipeline map: slug (derived from the source URL) →\n    // SourceDeclaration pointing at the machine-cache clone under\n    // ~/.skaile/sources/<slug>/. The slug is also the cache key for ensureRepo.\n    const skaileHome = process.env.SKAILE_HOME ?? join(homedir(), \".skaile\");\n    const sourcesDir = join(skaileHome, \"sources\");\n    const repositories: Record<string, SourceDeclaration> = {};\n    for (const s of sources) {\n      const slug = sourceSlug(s.url);\n      if (repositories[slug]) continue;\n      repositories[slug] = { path: join(sourcesDir, slug), url: s.url };\n    }\n\n    return { repositories, sources, stores, dependencies, overrides, patches, config };\n  }\n\n  /** Build provenance-index clones from the resolved source declarations. */\n  private buildClones(repositories: Record<string, SourceDeclaration>): SourceClone[] {\n    const clones: SourceClone[] = [];\n    for (const [slug, decl] of Object.entries(repositories)) {\n      const localPath = this.resolveRepoDir(decl, slug);\n      if (!localPath || !existsSync(localPath)) continue;\n      const commit = getRepoCommit(localPath) ?? \"0\".repeat(40);\n      clones.push({\n        localPath,\n        sourceUrl: decl.url ?? localPath,\n        commit,\n        tag: decl.branch,\n      });\n    }\n    return clones;\n  }\n\n  /**\n   * Bridge a resolved {@link ProvenanceCandidate} to a {@link CatalogEntry} for\n   * the deploy pipeline. `source` is the absolute path to the asset's primary\n   * manifest (or its directory) inside the clone; `publisher` is set to the\n   * clone slug so `deployAll`'s repositories lookup resolves local-vs-remote.\n   */\n  private candidateToCatalogEntry(\n    c: ProvenanceCandidate,\n    repositories: Record<string, SourceDeclaration>,\n  ): CatalogEntry | null {\n    // Find the clone slug whose declaration URL matches the candidate's source.\n    let slug: string | undefined;\n    let cloneDir: string | undefined;\n    for (const [s, decl] of Object.entries(repositories)) {\n      if (decl.url === c.sourceUrl) {\n        slug = s;\n        cloneDir = this.resolveRepoDir(decl, s) ?? undefined;\n        break;\n      }\n    }\n    if (!cloneDir) {\n      // Store-resolved or unknown source — fall back to the first source clone.\n      const first = Object.entries(repositories)[0];\n      if (first) {\n        slug = first[0];\n        cloneDir = this.resolveRepoDir(first[1], first[0]) ?? undefined;\n      }\n    }\n    if (!cloneDir || !slug) return null;\n\n    const MD_BY_KIND: Record<string, string> = {\n      skill: \"SKILL.md\",\n      agent: \"AGENT.md\",\n      bundle: \"BUNDLE.md\",\n      \"mcp-server\": \"MCP.md\",\n      connector: \"CONNECTOR.md\",\n      prompt: \"PROMPT.md\",\n      contract: \"CONTRACT.md\",\n    };\n    const mdName = MD_BY_KIND[c.kind];\n    const mdRel = c.files.find((f) => (mdName ? f.path.endsWith(mdName) : false))?.path;\n    const source = mdRel ? join(cloneDir, mdRel) : cloneDir;\n\n    return {\n      name: c.name,\n      kind: c.kind as CatalogEntry[\"kind\"],\n      description: \"\",\n      source,\n      publisher: slug,\n      version: c.version,\n      requires: [],\n      dependencies: [],\n      metadata: c.metadata,\n    };\n  }\n\n  // ── Install / resolve ──────────────────────────────────────────────────\n\n  /**\n   * Install all dependencies declared in `skaile.yaml`.\n   *\n   * Steps: clone/pull repositories → resolve transitive dependencies → reconcile\n   * (remove stale assets) → deploy new assets → write `skaile.lock.yaml` → record history.\n   *\n   * @param opts - Optional installation options.\n   * @param opts.locked - When `true`, restore the exact versions recorded in the existing\n   *   lock file instead of resolving from source. Throws if no lock file is found.\n   * @returns {@link InstallResult} summarising what was deployed, what was missing, and any collisions.\n   */\n  async install(opts?: { locked?: boolean }): Promise<InstallResult> {\n    const { repositories, sources, stores, dependencies, overrides, patches } = this.loadConfig();\n\n    if (opts?.locked) {\n      return this.installLocked(repositories, patches);\n    }\n\n    // 1. Ensure all source clones are present/up to date.\n    const pinBySlug = new Map(sources.map((s) => [sourceSlug(s.url), s.pin]));\n    for (const [name, decl] of Object.entries(repositories)) {\n      try {\n        ensureRepo(decl, name, this.reposDir, {\n          projectDir: this.projectDir,\n          pin: pinBySlug.get(name),\n        });\n      } catch (err) {\n        return {\n          deployed: [],\n          removed: [],\n          missing: [`source:${name} (${err instanceof Error ? err.message : String(err)})`],\n          lockWritten: false,\n        };\n      }\n    }\n\n    // 2. Build the provenance index from the clones and resolve.\n    const provenanceIndex = buildProvenanceIndex(this.buildClones(repositories), {\n      projectDir: this.projectDir,\n    });\n    const { resolved, missing, overridesApplied } = await resolveAll(dependencies, {\n      provenanceIndex,\n      overrides,\n      stores,\n      storeFetcher: this.buildStoreFetcher(stores),\n      projectDir: this.projectDir,\n    });\n\n    // 3. Reconcile: remove stale assets (in old lock but not in new resolved set).\n    const oldLock = this.tryReadLock();\n    const resolvedRefs = new Set(\n      resolved.map((c) => `${c.publisher}/${c.kind}:${c.name}@${c.version}`),\n    );\n    const removed: string[] = [];\n    if (oldLock) {\n      for (const ref of Object.keys(oldLock.assets)) {\n        if (!resolvedRefs.has(ref)) {\n          const { kind, name } = parseCanonicalLockKey(ref);\n          if (kind && name) {\n            removeAsset(kind, name, this.deployOpts);\n            removed.push(ref);\n          }\n        }\n      }\n    }\n\n    // 4. Map candidates to catalog entries and deploy.\n    const entries = resolved\n      .map((c) => this.candidateToCatalogEntry(c, repositories))\n      .filter((e): e is CatalogEntry => e !== null);\n    const deployed = deployAll(entries, repositories, patches, this.deployOpts);\n\n    // 5. Write the v2 lock file.\n    writeLock(this.lockPath, buildLockFile(resolved, overridesApplied));\n\n    // 6. Record history.\n    for (const ref of deployed) {\n      appendHistory(this.projectDir, {\n        ref,\n        action: \"add\",\n        timestamp: new Date().toISOString(),\n        context: this.global ? \"global\" : \"project\",\n      });\n    }\n    for (const ref of removed) {\n      appendHistory(this.projectDir, {\n        ref,\n        action: \"remove\",\n        timestamp: new Date().toISOString(),\n        context: this.global ? \"global\" : \"project\",\n      });\n    }\n\n    // 7. Install npm peer deps for any mount/connector declared in skaile.yaml.\n    const { npmInstalled, npmFailed } = await this.installRuntimeAssetDeps();\n\n    return { deployed, removed, missing, lockWritten: true, npmInstalled, npmFailed };\n  }\n\n  /** Read the lock, returning null on a legacy v1 lock instead of throwing. */\n  private tryReadLock(): LockFile | null {\n    try {\n      return readLock(this.lockPath);\n    } catch {\n      return null;\n    }\n  }\n\n  /** Build a store fetcher from the configured stores, or undefined when none. */\n  private buildStoreFetcher(stores: StoreEntry[]): StoreFetcher | undefined {\n    if (stores.length === 0) return undefined;\n    return {\n      getInstallManifest: async (storeUrl, ref) => {\n        const { RemoteCatalogSource, CatalogHttpError } = await import(\n          \"@skaile/workspaces/library\"\n        );\n        const src = new RemoteCatalogSource({ baseUrl: storeUrl });\n        try {\n          const m = await src.getInstallManifest(ref);\n          return {\n            sourceUrl: m.source.url,\n            commit: m.source.commitSha,\n            sha256: m.sha256,\n            files: m.files,\n          };\n        } catch (err) {\n          if (err instanceof CatalogHttpError && err.status === 404) return null;\n          throw err;\n        }\n      },\n      getCanonicalDigest: async (storeUrl, ref) => {\n        const { RemoteCatalogSource } = await import(\"@skaile/workspaces/library\");\n        const src = new RemoteCatalogSource({ baseUrl: storeUrl });\n        return src.getCanonicalDigest(ref);\n      },\n    };\n  }\n\n  /**\n   * Resolve runtime assets and install any missing npm peer deps.\n   *\n   * - Required deps: installed via `bun add --optional`. Failure is recorded\n   *   in `npmFailed` but does not throw — install() proceeds so users get a\n   *   useful error message rather than a hung command.\n   * - Optional deps: not installed automatically (would force every consumer\n   *   to pull every connector's deps). Future: add a flag to opt in.\n   */\n  private async installRuntimeAssetDeps(): Promise<{\n    npmInstalled: string[];\n    npmFailed: string[];\n  }> {\n    const npmInstalled: string[] = [];\n    const npmFailed: string[] = [];\n    let runtimeAssets: Awaited<ReturnType<typeof resolveRuntimeAssets>> | null = null;\n    try {\n      runtimeAssets = await resolveRuntimeAssets(this.projectDir);\n    } catch {\n      // Non-fatal — projects with no skaile.yaml or unresolvable base-assets\n      // simply have no runtime deps to install.\n      return { npmInstalled, npmFailed };\n    }\n\n    const required = runtimeAssets.requiredNpmDeps.required;\n    if (required.length === 0) return { npmInstalled, npmFailed };\n\n    const { findMissingPackages, installNpmPackages } = await import(\n      \"@skaile/workspaces/connectors\"\n    );\n    const missing = findMissingPackages(required, this.projectDir);\n    if (missing.length === 0) return { npmInstalled, npmFailed };\n\n    const result = await installNpmPackages(missing, this.projectDir);\n    if (result.success) {\n      npmInstalled.push(...missing);\n    } else {\n      npmFailed.push(...missing);\n    }\n    return { npmInstalled, npmFailed };\n  }\n\n  private installLocked(\n    repositories: Record<string, SourceDeclaration>,\n    patches: Record<string, string>,\n  ): InstallResult {\n    const lock = this.tryReadLock();\n    if (!lock) {\n      throw new Error(\"No lock file found. Run `skaile install` first.\");\n    }\n\n    // Ensure every contributing source clone exists at its pinned commit. Sources\n    // are keyed by URL slug; the lock's `sources[]` carries the URL + commit.\n    const declBySlug = new Map(Object.entries(repositories));\n    for (const src of lock.sources) {\n      const slug = sourceSlug(src.url);\n      const decl = declBySlug.get(slug) ?? { url: src.url };\n      ensureRepo(decl, slug, this.reposDir, { projectDir: this.projectDir, pin: src.commit });\n    }\n\n    // Resolve a source URL to its on-disk clone for verification.\n    const resolveCloneDir = (sourceUrl: string): string | null => {\n      const slug = sourceSlug(sourceUrl);\n      const decl = declBySlug.get(slug) ?? { url: sourceUrl };\n      return this.resolveRepoDir(decl, slug);\n    };\n\n    // Verify integrity against the v2 lock.\n    const verification = verifyLock(lock, resolveCloneDir);\n    if (!verification.ok) {\n      const issues = [\n        ...verification.drifted.map((r) => `drifted: ${r}`),\n        ...verification.missing.map((r) => `missing: ${r}`),\n      ];\n      throw new Error(`Lock file verification failed:\\n  ${issues.join(\"\\n  \")}`);\n    }\n\n    // Rebuild catalog entries from the lock and deploy.\n    const resolved: CatalogEntry[] = [];\n    for (const [ref, entry] of Object.entries(lock.assets)) {\n      const { publisher, kind, name } = parseCanonicalLockKey(ref);\n      if (!publisher || !kind || !name) continue;\n      const slug = sourceSlug(entry.source.url);\n      const cloneDir = resolveCloneDir(entry.source.url) ?? join(this.reposDir, slug);\n      const mdRel =\n        entry.files.find((f) => /\\.(md|yaml)$/i.test(f.path))?.path ?? entry.files[0]?.path ?? \"\";\n      resolved.push({\n        name,\n        kind: kind as CatalogEntry[\"kind\"],\n        description: \"\",\n        source: mdRel ? join(cloneDir, mdRel) : cloneDir,\n        publisher: slug,\n        version: entry.source.commit,\n        requires: [],\n        dependencies: [],\n      });\n      // Ensure the repositories map has an entry for deployAll's local/remote check.\n      if (!repositories[slug]) repositories[slug] = { url: entry.source.url, path: cloneDir };\n    }\n\n    const deployed = deployAll(resolved, repositories, patches, this.deployOpts);\n    return { deployed, removed: [], missing: [], lockWritten: false };\n  }\n\n  /**\n   * Add a single asset (and its transitive dependencies) to the workspace.\n   *\n   * Resolves `ref`, deploys the asset and all requirements, then records the ref\n   * in `skaile.yaml` `dependencies` so subsequent `skaile install` runs re-deploy it.\n   *\n   * @param ref - Asset ref in `kind:name` or `repo/kind:name` form (e.g. `skill:my-skill`).\n   * @returns Array of asset refs that were deployed in this call.\n   * @throws When the asset cannot be found in any configured repository.\n   */\n  async add(ref: string): Promise<string[]> {\n    const { repositories, stores, overrides, patches } = this.loadConfig();\n    const parsed = parseAssetRef(ref);\n\n    // Ensure clones.\n    for (const [name, decl] of Object.entries(repositories)) {\n      try {\n        ensureRepo(decl, name, this.reposDir, { projectDir: this.projectDir });\n      } catch {}\n    }\n\n    const provenanceIndex = buildProvenanceIndex(this.buildClones(repositories), {\n      projectDir: this.projectDir,\n    });\n    const { resolved, missing } = await resolveAll([ref], {\n      provenanceIndex,\n      overrides,\n      stores,\n      storeFetcher: this.buildStoreFetcher(stores),\n      projectDir: this.projectDir,\n    });\n    if (resolved.length === 0) {\n      throw new Error(\n        `Asset not found: ${ref}${missing.length ? ` (missing: ${missing.join(\", \")})` : \"\"}`,\n      );\n    }\n\n    const entries = resolved\n      .map((c) => this.candidateToCatalogEntry(c, repositories))\n      .filter((e): e is CatalogEntry => e !== null);\n    const deployed = deployAll(entries, repositories, patches, this.deployOpts);\n\n    // Add to skaile.yaml dependencies (canonical ref string).\n    this.addDependencyToConfig(ref);\n\n    for (const d of deployed) {\n      appendHistory(this.projectDir, {\n        ref: d,\n        action: \"add\",\n        timestamp: new Date().toISOString(),\n        context: this.global ? \"global\" : \"project\",\n      });\n    }\n\n    return deployed;\n  }\n\n  /**\n   * Remove a deployed asset and unregister it from `skaile.yaml`.\n   *\n   * @param ref - Asset ref in `kind:name` form (e.g. `skill:my-skill`).\n   * @returns `true` if the asset was found and removed, `false` if it was not deployed.\n   */\n  remove(ref: string): boolean {\n    const parsed = parseAssetRef(ref);\n    const ok = removeAsset(parsed.kind, parsed.name, this.deployOpts);\n    if (ok) {\n      const depRef = `${parsed.kind}:${parsed.name}`;\n      this.removeDependencyFromConfig(depRef);\n\n      appendHistory(this.projectDir, {\n        ref: depRef,\n        action: \"remove\",\n        timestamp: new Date().toISOString(),\n        context: this.global ? \"global\" : \"project\",\n      });\n    }\n    return ok;\n  }\n\n  // ── Query ──────────────────────────────────────────────────────────────\n\n  /**\n   * Search the catalog across all configured repositories.\n   *\n   * @param query - Substring to match against entry names and descriptions (case-insensitive).\n   *   Omit to return all entries.\n   * @param kind - Filter by asset kind (`\"skill\"`, `\"agent\"`, `\"prompt\"`, `\"flow\"`, `\"contract\"`).\n   *   Omit to return all kinds.\n   * @returns Array of matching {@link CatalogEntry} objects from all accessible repositories.\n   */\n  search(query?: string, kind?: string): CatalogEntry[] {\n    const { repositories } = this.loadConfig();\n    let all: CatalogEntry[] = [];\n\n    for (const [name, decl] of Object.entries(repositories)) {\n      const repoDir = this.resolveRepoDir(decl, name);\n      if (!repoDir) continue;\n      all = [...all, ...scanRepo(repoDir, name)];\n    }\n\n    if (kind) all = all.filter((e) => e.kind === kind);\n    if (query) {\n      const q = query.toLowerCase();\n      all = all.filter(\n        (e) => e.name.toLowerCase().includes(q) || e.description.toLowerCase().includes(q),\n      );\n    }\n    return all;\n  }\n\n  /**\n   * Look up a single asset's full catalog entry.\n   *\n   * @param ref - Asset ref in `kind:name` or `repo/kind:name` form.\n   * @returns The matching {@link CatalogEntry}, or `null` when not found.\n   */\n  info(ref: string): CatalogEntry | null {\n    const { repositories } = this.loadConfig();\n    const parsed = parseAssetRef(ref);\n\n    for (const [name, decl] of Object.entries(repositories)) {\n      const repoDir = this.resolveRepoDir(decl, name);\n      if (!repoDir) continue;\n      if (parsed.publisher && parsed.publisher !== name) continue;\n      const entries = scanRepo(repoDir, name);\n      const match = entries.find((e) => e.kind === parsed.kind && e.name === parsed.name);\n      if (match) return match;\n    }\n    return null;\n  }\n\n  /**\n   * List all assets currently deployed in the workspace (or global cache).\n   *\n   * Scans the framework deploy directories rather than the lock file, so it\n   * also returns assets that were installed manually or outside of `skaile install`.\n   *\n   * @param kind - Filter by asset kind. Omit to return all kinds.\n   * @returns Shallow {@link CatalogEntry} objects (description and version will be empty).\n   */\n  listDeployed(kind?: string): CatalogEntry[] {\n    // Bundles are dependency groups, not deployed as files — exclude from scan\n    const kinds = (\n      kind ? [kind] : [\"skill\", \"agent\", \"prompt\", \"flow\", \"contract\"]\n    ) as AiComponent[];\n    const result: CatalogEntry[] = [];\n    const seen = new Set<string>();\n    for (const k of kinds) {\n      try {\n        const base = deployedBase(k, this.driverTarget, this.global, this.projectDir);\n        if (!existsSync(base)) continue;\n        for (const item of readdirSync(base, { withFileTypes: true })) {\n          // Directories and symlinks use the directory name directly (skills, omp agents, etc.)\n          // Files use the stem without extension (claude-code agents → .md, codex agents → .toml,\n          // prompts → .prompt.md, flows → .flow.yaml/.flow.json)\n          let name: string;\n          if (item.isDirectory() || item.isSymbolicLink()) {\n            name = item.name;\n          } else if (item.isFile()) {\n            name = item.name\n              .replace(/\\.prompt\\.md$/, \"\")\n              .replace(/\\.flow\\.(yaml|json)$/, \"\")\n              .replace(/\\.bundle\\.yaml$/, \"\")\n              .replace(/\\.(md|toml|yaml|json)$/, \"\");\n          } else {\n            continue;\n          }\n          const key = `${k}:${name}`;\n          if (seen.has(key)) continue;\n          seen.add(key);\n          result.push({\n            name,\n            kind: k as any,\n            description: \"\",\n            source: join(base, item.name),\n            version: \"\",\n            requires: [],\n            dependencies: [],\n          });\n        }\n      } catch {}\n    }\n    return result;\n  }\n\n  /**\n   * Build an aggregated workspace overview with domain grouping and sync status.\n   *\n   * Combines deployed assets, lock file metadata, and live repository status\n   * into a single structured result. Used by `skaile status`.\n   *\n   * @returns {@link OverviewResult} with entries grouped by domain and per-repo sync status.\n   */\n  overview(): OverviewResult {\n    const { repositories } = this.loadConfig();\n    const lock = this.tryReadLock();\n    const deployed = this.listDeployed();\n\n    // Get repo sync status\n    const repoStatuses = new Map<string, RepoStatusInfo>();\n    for (const [name, decl] of Object.entries(repositories)) {\n      const status = checkRepoStatus(decl, name, this.reposDir);\n      repoStatuses.set(name, {\n        name,\n        kind: status.kind,\n        behind: status.behind,\n        upToDate: status.upToDate,\n        error: status.error,\n      });\n    }\n\n    // Index lock entries by their <kind>:<name> suffix for deployed-asset lookup.\n    const lockByKindName = new Map<string, { publisher: string; version: string; url: string }>();\n    for (const [key] of Object.entries(lock?.assets ?? {})) {\n      const parsed = parseCanonicalLockKey(key);\n      if (parsed.kind && parsed.name && parsed.publisher && parsed.version) {\n        lockByKindName.set(`${parsed.kind}:${parsed.name}`, {\n          publisher: parsed.publisher,\n          version: parsed.version,\n          url: lock!.assets[key]!.source.url,\n        });\n      }\n    }\n\n    // Build entries with publisher + sync info. Domain grouping is by publisher\n    // now that the lock no longer records a project-local domain.\n    const entries: OverviewEntry[] = [];\n    for (const d of deployed) {\n      const lockEntry = lockByKindName.get(`${d.kind}:${d.name}`);\n      const publisher = lockEntry?.publisher ?? \"\";\n      const version = lockEntry?.version ?? \"\";\n      const slug = lockEntry ? sourceSlug(lockEntry.url) : \"\";\n      let syncStatus = \"unknown\";\n      if (slug) {\n        const repoStatus = repoStatuses.get(slug);\n        if (!repoStatus) syncStatus = \"unknown\";\n        else if (repoStatus.kind === \"local\") syncStatus = \"local\";\n        else if (repoStatus.error) syncStatus = \"error\";\n        else if (repoStatus.upToDate) syncStatus = \"synced\";\n        else syncStatus = \"outdated\";\n      }\n      const domain = publisher || \"unknown\";\n      entries.push({ kind: d.kind, name: d.name, domain, publisher, version, syncStatus });\n    }\n\n    // Group by domain (= publisher)\n    const byDomain = new Map<string, OverviewEntry[]>();\n    for (const e of entries) {\n      if (!byDomain.has(e.domain)) byDomain.set(e.domain, []);\n      byDomain.get(e.domain)!.push(e);\n    }\n\n    // Sort domains alphabetically, entries within domain by kind then name\n    const sorted = new Map<string, OverviewEntry[]>();\n    for (const key of [...byDomain.keys()].sort()) {\n      sorted.set(\n        key,\n        byDomain\n          .get(key)!\n          .sort((a, b) =>\n            a.kind !== b.kind ? a.kind.localeCompare(b.kind) : a.name.localeCompare(b.name),\n          ),\n      );\n    }\n\n    return {\n      byDomain: sorted,\n      total: entries.length,\n      repos: [...repoStatuses.values()],\n    };\n  }\n\n  /**\n   * Build the resolved dependency tree from the lock file.\n   *\n   * @returns Root {@link DependencyNode} with `ref === \"project\"` whose children\n   *   are the directly-declared dependencies, each with their own transitive subtrees.\n   *   Returns a single node with `ref === \"(no lock file)\"` when no lock exists.\n   */\n  tree(): DependencyNode {\n    const lock = this.tryReadLock();\n    if (!lock) return { ref: \"(no lock file)\", children: [] };\n\n    // v2 lock no longer records per-asset parent provenance — every locked asset\n    // is shown as a direct child of the project (flat tree).\n    return {\n      ref: \"project\",\n      children: Object.keys(lock.assets).map((ref) => ({ ref, children: [] })),\n    };\n  }\n\n  /**\n   * Explain why an asset is installed by tracing its dependency chain in the lock file.\n   *\n   * @param ref - Asset ref in `kind:name` form.\n   * @returns Chain of refs from the asset back to `\"direct (skaile.yaml)\"`, or `[]` when\n   *   the asset is not in the lock file.\n   */\n  why(ref: string): string[] {\n    const lock = this.tryReadLock();\n    if (!lock) return [];\n    if (!lock.assets[ref]) return []; // not in lock file\n    // v2 lock no longer records a dep chain — every locked asset is reported as\n    // directly declared. (Transitive provenance reconstruction is out of scope.)\n    return [ref, \"direct (skaile.yaml)\"];\n  }\n\n  /**\n   * List installed assets whose source repository is behind the remote.\n   *\n   * Only remote repositories (not local paths) are checked for staleness.\n   *\n   * @returns Array of {@link OutdatedEntry} objects, one per asset in a repository\n   *   that has commits not yet pulled locally.\n   */\n  outdated(): OutdatedEntry[] {\n    const { repositories } = this.loadConfig();\n    const lock = this.tryReadLock();\n    if (!lock) return [];\n\n    const result: OutdatedEntry[] = [];\n    for (const src of lock.sources) {\n      const slug = sourceSlug(src.url);\n      const decl = repositories[slug];\n      if (!decl || decl.path) continue; // skip unknown / local sources\n      const status = checkRepoStatus(decl, slug, this.reposDir);\n      if (status.behind <= 0) continue;\n      for (const [ref, entry] of Object.entries(lock.assets)) {\n        if (entry.source.url !== src.url) continue;\n        const { publisher, kind, name, version } = parseCanonicalLockKey(ref);\n        if (!kind || !name) continue;\n        result.push({\n          kind,\n          name,\n          publisher: publisher ?? slug,\n          currentVersion: version ?? \"\",\n          behind: status.behind,\n        });\n      }\n    }\n    return result;\n  }\n\n  /**\n   * Produce a unified diff between the deployed asset and its catalog source.\n   *\n   * Useful for detecting manual edits to deployed files or verifying that a patch\n   * was applied correctly.\n   *\n   * @param ref - Asset ref in `kind:name` form.\n   * @returns Unified diff string, or `null` when there are no differences or the\n   *   asset is not deployed/resolvable.\n   */\n  diff(ref: string): string | null {\n    const parsed = parseAssetRef(ref);\n    const entry = this.info(ref);\n    if (!entry) return null;\n\n    const deployedPath = join(\n      deployedBase(parsed.kind as AiComponent, this.driverTarget, this.global, this.projectDir),\n      parsed.name,\n    );\n    if (!existsSync(deployedPath) || !existsSync(entry.source)) return null;\n\n    const r = spawnSync(\"diff\", [\"-ruN\", entry.source, deployedPath], { encoding: \"utf8\" });\n    return r.status === 1 ? r.stdout : null;\n  }\n\n  // ── Lock ───────────────────────────────────────────────────────────────\n\n  /**\n   * Resolve all declared dependencies and write (or overwrite) `skaile.lock.yaml`.\n   *\n   * Performs repository sync and full dependency resolution without deploying assets.\n   * Use this to regenerate the lock file after manually editing `skaile.yaml`.\n   *\n   * @returns The written {@link LockFile} data.\n   */\n  async lock(): Promise<LockFile> {\n    const { repositories, stores, dependencies, overrides } = this.loadConfig();\n\n    for (const [name, decl] of Object.entries(repositories)) {\n      try {\n        ensureRepo(decl, name, this.reposDir, { projectDir: this.projectDir });\n      } catch {}\n    }\n\n    const provenanceIndex = buildProvenanceIndex(this.buildClones(repositories), {\n      projectDir: this.projectDir,\n    });\n    const { resolved, overridesApplied } = await resolveAll(dependencies, {\n      provenanceIndex,\n      overrides,\n      stores,\n      storeFetcher: this.buildStoreFetcher(stores),\n      projectDir: this.projectDir,\n    });\n    const lockData = buildLockFile(resolved, overridesApplied);\n    writeLock(this.lockPath, lockData);\n    return lockData;\n  }\n\n  // ── Patch workflow ─────────────────────────────────────────────────────\n\n  /**\n   * Extract a deployed asset into a patch working directory for editing.\n   *\n   * Copies the deployed asset to `.skaile/patches/<kind>-<name>/` so changes\n   * can be made there and then committed as a patch file via `patchCommit`.\n   *\n   * @param ref - Asset ref in `kind:name` form.\n   * @returns Absolute path to the patch working directory.\n   * @throws When the asset cannot be found in the catalog.\n   */\n  patch(ref: string): string {\n    const entry = this.info(ref);\n    if (!entry) throw new Error(`Asset not found: ${ref}`);\n    return extractForPatch(entry, this.patchDir);\n  }\n\n  /**\n   * Generate a `.patch` file from changes made in the patch working directory.\n   *\n   * Diffs the patch working directory against the original catalog source and\n   * writes the result to `.skaile/patches/<kind>-<name>.patch`.\n   *\n   * @param ref - Asset ref in `kind:name` form.\n   * @returns Absolute path to the generated `.patch` file.\n   * @throws When the patch working directory does not exist or no differences are found.\n   */\n  patchCommit(ref: string): string {\n    const parsed = parseAssetRef(ref);\n    const entry = this.info(ref);\n    if (!entry) throw new Error(`Asset not found: ${ref}`);\n\n    const patchedDir = join(this.patchDir, `${parsed.kind}-${parsed.name}`);\n    if (!existsSync(patchedDir)) {\n      throw new Error(`No patch working dir found. Run \\`skaile patch ${ref}\\` first.`);\n    }\n\n    const originalDir = dirname(entry.source);\n    const content = generatePatch(originalDir, patchedDir);\n    if (!content) throw new Error(\"No differences found.\");\n\n    const patchFile = join(this.patchDir, `${parsed.kind}-${parsed.name}.patch`);\n    savePatch(patchFile, content);\n    return patchFile;\n  }\n\n  /**\n   * Apply the committed patch file to the repository clone and open a contribution branch.\n   *\n   * Applies `.skaile/patches/<kind>-<name>.patch` to the repository clone, creates a\n   * `patch/<kind>-<name>` branch, and stages a commit — ready to push via `contribPush`.\n   *\n   * @param ref - Asset ref in `kind:name` form.\n   * @throws When the asset is not found, has no repository, or the patch file is missing.\n   */\n  patchSubmit(ref: string): void {\n    const parsed = parseAssetRef(ref);\n    const entry = this.info(ref);\n    if (!entry?.publisher) throw new Error(`Asset not found or no publisher: ${ref}`);\n\n    const { repositories } = this.loadConfig();\n    const decl = repositories[entry.publisher];\n    if (!decl?.url) throw new Error(\"Can only submit patches for remote sources.\");\n\n    const repoDir = join(this.reposDir, entry.publisher);\n    const branchName = `patch/${parsed.kind}-${parsed.name}`;\n\n    // Apply patch to repo clone\n    const patchFile = join(this.patchDir, `${parsed.kind}-${parsed.name}.patch`);\n    if (!existsSync(patchFile)) throw new Error(\"No patch file. Run `skaile patch-commit` first.\");\n\n    coreApplyPatch(repoDir, patchFile);\n    commitChanges(repoDir, `fix: improve ${parsed.kind} ${parsed.name}`, branchName);\n  }\n\n  /**\n   * Delete the patch working directory and patch file for an asset.\n   *\n   * @param ref - Asset ref in `kind:name` form.\n   */\n  patchRemove(ref: string): void {\n    const parsed = parseAssetRef(ref);\n    const patchFile = join(this.patchDir, `${parsed.kind}-${parsed.name}.patch`);\n    const patchedDir = join(this.patchDir, `${parsed.kind}-${parsed.name}`);\n    try {\n      rmSync(patchFile);\n    } catch {}\n    try {\n      rmSync(patchedDir, { recursive: true });\n    } catch {}\n  }\n\n  // ── Doctor ─────────────────────────────────────────────────────────────\n\n  /**\n   * Scan deployed assets for unsatisfied transitive dependencies.\n   *\n   * For each deployed asset, checks that all entries in its `requires` list are\n   * also deployed. Returns a list of issues with a flag indicating whether the\n   * missing dependency can be resolved from a configured repository.\n   *\n   * @returns Array of {@link DepIssue} objects. An empty array means the workspace is healthy.\n   */\n  doctor(): DepIssue[] {\n    const { repositories } = this.loadConfig();\n    const deployed = this.listDeployed();\n    const issues: DepIssue[] = [];\n\n    for (const entry of deployed) {\n      const full = this.info(`${entry.kind}:${entry.name}`);\n      if (!full) continue;\n      for (const req of full.requires) {\n        if (\n          !isDeployed(\n            req.kind as AiComponent,\n            req.name,\n            this.driverTarget,\n            this.global,\n            this.projectDir,\n          )\n        ) {\n          const inRepos =\n            resolveAsset({ kind: req.kind, name: req.name }, repositories, this.reposDir) !== null;\n          issues.push({\n            assetKind: entry.kind,\n            assetName: entry.name,\n            depKind: req.kind,\n            depName: req.name,\n            inRepos,\n          });\n        }\n      }\n    }\n    return issues;\n  }\n\n  // ── Scaffold ───────────────────────────────────────────────────────────\n\n  /**\n   * Create a minimal asset scaffold directory (delegates to {@link createScaffold}).\n   *\n   * @param name - Asset name (also used as the directory name).\n   * @param kind - Asset kind: `skill` | `agent` | `bundle` | `flow` | `prompt` | `contract`.\n   * @param destDir - Parent directory to create the asset in.\n   * @returns `{ ok: true, path }` on success, `{ ok: false, path: errorMessage }` if the\n   *   directory already exists.\n   */\n  create(name: string, kind: string, destDir: string): { ok: boolean; path: string } {\n    return createScaffold(name, kind, destDir);\n  }\n\n  // ── Contrib (REMOVED 2026-05-12) ───────────────────────────────────────\n  //\n  // The `contribChanges / contribDiff / contribCommit / contribPush /\n  // contribCompare` methods were retired alongside `skaile repo contrib *`.\n  // The refinement push-back workflow is being re-introduced in Phase 4 as\n  // `skaile publish` + `skaile preset push` against the Library Source model.\n\n  // ── History ────────────────────────────────────────────────────────────\n\n  /**\n   * Return recent asset action history entries, newest first.\n   *\n   * @param limit - Maximum number of entries to return. Defaults to `20`.\n   * @returns Array of {@link HistoryEntry} objects in reverse-chronological order.\n   */\n  history(limit = 20): HistoryEntry[] {\n    return getRecentHistory(this.projectDir, limit);\n  }\n\n  /**\n   * Erase all asset action history for this workspace.\n   */\n  clearHistory(): void {\n    clearHistory(this.projectDir);\n  }\n\n  // ── Clean ───────────────────────────────────────────────────────────────\n\n  /**\n   * Remove deployed assets tracked by the lock file and report unmanaged ones.\n   *\n   * With `opts.all`, also deletes `.skaile/history.yaml`, `.skaile/patches/`,\n   * `.skaile/repos/`, and `skaile.lock.yaml` — effectively resetting the workspace\n   * to a pre-install state.\n   *\n   * @param opts - Optional cleanup options.\n   * @param opts.all - When `true`, remove all Skaile-managed state in addition to deployed assets.\n   * @returns Object with `removed` (successfully cleaned refs), `skipped` (with reasons),\n   *   and `unmanaged` (deployed assets not in the lock file).\n   */\n  clean(opts?: { all?: boolean }): {\n    removed: string[];\n    skipped: Array<{ ref: string; reason: string }>;\n    unmanaged: string[];\n  } {\n    const lock = this.tryReadLock();\n    const removed: string[] = [];\n    const skipped: Array<{ ref: string; reason: string }> = [];\n\n    if (lock) {\n      for (const ref of Object.keys(lock.assets)) {\n        const { kind, name } = parseCanonicalLockKey(ref);\n        if (!kind || !name) continue;\n        const dest = deployedDir(\n          kind as AiComponent,\n          name,\n          this.driverTarget,\n          this.global,\n          this.projectDir,\n        );\n\n        try {\n          const stat = lstatSync(dest);\n          if (stat.isSymbolicLink()) unlinkSync(dest);\n          else rmSync(dest, { recursive: true, force: true });\n          removed.push(ref);\n        } catch {\n          // Already gone — count as removed\n          removed.push(ref);\n        }\n      }\n    }\n\n    // Collect unmanaged assets for reporting. Deployed assets are keyed by\n    // <kind>:<name>; map lock canonical refs to that shape for comparison.\n    const lockRefs = lock\n      ? new Set(\n          Object.keys(lock.assets).map((r) => {\n            const p = parseCanonicalLockKey(r);\n            return p.kind && p.name ? `${p.kind}:${p.name}` : r;\n          }),\n        )\n      : new Set<string>();\n    const unmanaged: string[] = [];\n    const allDeployed = this.listDeployed();\n    for (const d of allDeployed) {\n      const ref = `${d.kind}:${d.name}`;\n      if (!lockRefs.has(ref)) {\n        unmanaged.push(ref);\n      }\n    }\n\n    if (opts?.all) {\n      // Delete history file\n      const historyFile = join(this.projectDir, \".skaile\", \"history.yaml\");\n      try {\n        unlinkSync(historyFile);\n      } catch {}\n\n      // Remove patches dir\n      try {\n        rmSync(this.patchDir, { recursive: true, force: true });\n      } catch {}\n\n      // Remove repos dir\n      try {\n        rmSync(this.reposDir, { recursive: true, force: true });\n      } catch {}\n\n      // Remove lock file\n      try {\n        unlinkSync(this.lockPath);\n      } catch {}\n    }\n\n    return { removed, skipped, unmanaged };\n  }\n\n  // ── Helpers ────────────────────────────────────────────────────────────\n\n  /** Add a dependency ref to skaile.yaml if not already present. */\n  private addDependencyToConfig(ref: string): void {\n    if (this.global) return; // global installs don't modify skaile.yaml\n    const configPath = join(this.projectDir, \"skaile.yaml\");\n    if (!existsSync(configPath)) return;\n    const raw = parseYaml(readFileSync(configPath, \"utf8\")) ?? {};\n    if (!raw.dependencies) raw.dependencies = [];\n    if (!raw.dependencies.includes(ref)) {\n      raw.dependencies.push(ref);\n      writeFileSync(configPath, stringifyYaml(raw, { lineWidth: 120 }));\n    }\n  }\n\n  /** Remove a dependency ref from skaile.yaml. */\n  private removeDependencyFromConfig(ref: string): void {\n    if (this.global) return;\n    const configPath = join(this.projectDir, \"skaile.yaml\");\n    if (!existsSync(configPath)) return;\n    const raw = parseYaml(readFileSync(configPath, \"utf8\")) ?? {};\n    if (!raw.dependencies) return;\n    const idx = raw.dependencies.indexOf(ref);\n    if (idx !== -1) {\n      raw.dependencies.splice(idx, 1);\n      writeFileSync(configPath, stringifyYaml(raw, { lineWidth: 120 }));\n    }\n  }\n\n  private resolveRepoDir(decl: SourceDeclaration, name: string): string | null {\n    // Check links first\n    const links = readLinks(this.projectDir);\n    if (links[name]) {\n      return existsSync(links[name]) ? links[name] : null;\n    }\n\n    if (decl.path) {\n      const resolved = resolve(this.projectDir, decl.path);\n      return existsSync(resolved) ? resolved : null;\n    }\n\n    // Check project-local symlink, then global cache\n    const dest = join(this.reposDir, name);\n    if (existsSync(dest)) return dest;\n\n    const globalDest = join(getGlobalCacheDir(), name);\n    if (existsSync(join(globalDest, \".git\"))) return globalDest;\n\n    return null;\n  }\n}\n\n// ── Agent install (renders GitAgent packages to framework-native files) ──\n\nexport { installAgent } from \"./install-agent.js\";\n\n// ── Renderers ─────────────────────────────────────────────────────────────\n\nexport {\n  AGENT_RENDERERS,\n  claudeCodeRenderer,\n  codexRenderer,\n  driverTargetSupportsAgents,\n  ompRenderer,\n} from \"./renderers.js\";\nexport type { AgentRenderer, AgentRenderInput, AgentRenderResult } from \"./renderers.js\";\n\n// ── Fragments ─────────────────────────────────────────────────────────────\n\nexport type {\n  AbilityRef,\n  ConnectorRef,\n  ContractRef,\n  FragmentContext,\n  FragmentId,\n} from \"./fragments.js\";\nexport { BUILT_IN_FRAGMENTS, resolveFragments, loadPromptExtensions } from \"./fragments.js\";\n"]}

package/dist/chunk-ETMUGBHF.js.map

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* Lock file I/O and integrity verification (schema v2).\n *\n * The lock file (skaile.lock.yaml) captures the complete resolved state: every\n * asset keyed by its canonical ref `<publisher>/<kind>:<name>@<version>`, the\n * upstream source + commit it resolved from, a per-file + composite content\n * hash for drift detection, and whether an `overrides[]` entry pinned it. A\n * top-level `sources:` block records every contributing source URL at its\n * resolved commit.\n *\n * Old v1 lockfiles (`lockfile_version: 1`, `repositories:`) are rejected with a\n * clear regenerate-from-scratch error.\n */\n\nimport { createHash } from \"node:crypto\";\nimport { existsSync, readFileSync, writeFileSync } from \"node:fs\";\nimport { join } from \"node:path\";\nimport { parse, stringify } from \"yaml\";\nimport type {\n  LockEntry,\n  LockFile,\n  LockPluginEntry,\n  LockSourceEntry,\n} from \"./models.js\";\nimport type { ProvenanceCandidate } from \"./walker.js\";\n\n// ── Lock file I/O ────────────────────────────────────────────────────────────\n\n/**\n * Serialize a `LockFile` to YAML and write it to disk.\n *\n * @param lockPath - Absolute path to write the lock file (e.g. `skaile.lock.yaml`)\n * @param data - Lock file data to serialize\n * @docLink packages/core/api-reference#write-lock\n */\nexport function writeLock(lockPath: string, data: LockFile): void {\n  writeFileSync(lockPath, stringify(data, { lineWidth: 120 }));\n}\n\n/**\n * Read and parse a lock file from disk.\n *\n * @param lockPath - Absolute path to the lock file\n * @returns Parsed `LockFile`, or `null` if the file is missing or unparseable\n * @throws When the file is a legacy v1 lock — the shape changed and it must be regenerated.\n * @docLink packages/core/api-reference#read-lock\n */\nexport function readLock(lockPath: string): LockFile | null {\n  if (!existsSync(lockPath)) return null;\n  let raw: unknown;\n  try {\n    raw = parse(readFileSync(lockPath, \"utf8\"));\n  } catch {\n    return null;\n  }\n  if (!raw || typeof raw !== \"object\") return null;\n  const r = raw as Record<string, unknown>;\n  if (r.schema_version !== 2) {\n    throw new Error(\n      \"lockfile schema v1 detected. The lockfile shape changed in \" +\n        \"@skaile/workspaces 4.x. Regenerate: `rm skaile.lock.yaml && skaile install`.\",\n    );\n  }\n  return r as unknown as LockFile;\n}\n\n// ── Hashing ──────────────────────────────────────────────────────────────────\n\n/**\n * Compute the SHA-256 hash of a file's content (hex digest, no prefix).\n *\n * @param filePath - Absolute path to the file\n * @returns Hex-encoded SHA-256 hash string\n * @docLink packages/core/api-reference#compute-hash\n */\nexport function computeHash(filePath: string): string {\n  const content = readFileSync(filePath);\n  return createHash(\"sha256\").update(content).digest(\"hex\");\n}\n\n/**\n * Composite hash: SHA-256 (bare 64-hex) over `localeCompare`-sorted\n * `<path>:<sha256>\\n` rows. 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The plugin-store reconciler folds this into its reconcile-hash\n * so a lock edit invalidates the hash even without a manifest change.\n *\n * @param projectDir - Project root containing `skaile.lock.yaml`\n * @returns The `plugins` record, or `undefined` when absent\n */\nexport function readPluginsLockSlice(\n  projectDir: string,\n): Record<string, LockPluginEntry> | undefined {\n  try {\n    return readLock(lockPathFor(projectDir))?.plugins;\n  } catch {\n    // Legacy v1 lock — no usable plugins slice.\n    return undefined;\n  }\n}\n\n/**\n * Merge a `plugins` slice into a project's `skaile.lock.yaml`, preserving all\n * other fields. Creates a minimal v2 lock file when none exists (or the\n * existing one is a legacy v1 that can't be read).\n *\n * @param projectDir - Project root containing `skaile.lock.yaml`\n * @param slice - The `plugins` record to persist\n */\nexport function writePluginsLockSlice(\n  projectDir: string,\n  slice: Record<string, LockPluginEntry>,\n): void {\n  const lockPath = lockPathFor(projectDir);\n  let existing: LockFile | null = null;\n  try {\n    existing = readLock(lockPath);\n  } catch {\n    existing = null; // legacy v1 — overwrite with a fresh v2 shell\n  }\n  const next: LockFile = existing ?? {\n    schema_version: 2,\n    locked_at: new Date().toISOString(),\n    assets: {},\n    sources: [],\n  };\n  next.plugins = slice;\n  writeLock(lockPath, next);\n}\n\n// ── Verification ─────────────────────────────────────────────────────────────\n\n/**\n * Result of verifying a lock file against the current repository state.\n * @docLink packages/core/api-reference#verify-result\n */\nexport interface VerifyResult {\n  /** `true` when no drift or missing assets were found. */\n  ok: boolean;\n  /** Canonical refs whose content hash no longer matches. */\n  drifted: string[];\n  /** Canonical refs whose files cannot be found on disk. */\n  missing: string[];\n}\n\n/**\n * Verify a v2 lock file against the current on-disk source clones.\n *\n * For each locked asset, resolve its source clone directory via `resolveCloneDir`\n * (URL → on-disk path), re-hash the recorded files, and compare the recomputed\n * composite against the locked `sha256`. Reports assets whose hash changed\n * (`drifted`) and assets whose files are missing (`missing`).\n *\n * @param lock - Previously generated v2 `LockFile`.\n * @param resolveCloneDir - Maps a source URL to its on-disk clone root (or null).\n * @returns `VerifyResult` indicating drift and missing assets.\n * @docLink packages/core/api-reference#verify-lock\n */\nexport function verifyLock(\n  lock: LockFile,\n  resolveCloneDir: (sourceUrl: string) => string | null,\n): VerifyResult {\n  const drifted: string[] = [];\n  const missing: string[] = [];\n\n  for (const [ref, entry] of Object.entries(lock.assets)) {\n    const cloneDir = resolveCloneDir(entry.source.url);\n    if (!cloneDir) {\n      missing.push(ref);\n      continue;\n    }\n    let allPresent = true;\n    const recomputed: Array<{ path: string; sha256: string }> = [];\n    for (const f of entry.files) {\n      const abs = join(cloneDir, f.path);\n      if (!existsSync(abs)) {\n        allPresent = false;\n        break;\n      }\n      recomputed.push({ path: f.path, sha256: computeHash(abs) });\n    }\n    if (!allPresent) {\n      missing.push(ref);\n      continue;\n    }\n    if (compositeHash(recomputed) !== entry.sha256) {\n      drifted.push(ref);\n    }\n  }\n\n  return { ok: drifted.length === 0 && missing.length === 0, drifted, missing };\n}\n","/**\n * Patch operations — extract, generate, apply patches for skill improvement.\n *\n * Patches allow editing deployed assets from remote repos and contributing\n * changes back upstream via PR.\n */\n\nimport { spawnSync } from \"node:child_process\";\nimport { cpSync, existsSync, mkdirSync, readdirSync, readFileSync, writeFileSync } from \"node:fs\";\nimport { basename, dirname, join } from \"node:path\";\nimport type { CatalogEntry } from \"./models.js\";\n\n/**\n * Copy an asset's source directory into a patch working directory for editing.\n *\n * @param entry - The catalog entry to extract\n * @param patchDir - Base directory where extracted copies are placed\n * @returns Absolute path to the extracted copy (`<patchDir>/<kind>-<name>`)\n * @docLink packages/core/api-reference#extract-for-patch\n */\nexport function extractForPatch(entry: CatalogEntry, patchDir: string): string {\n  const ref = `${entry.kind}-${entry.name}`;\n  const dest = join(patchDir, ref);\n  mkdirSync(dest, { recursive: true });\n\n  // Copy the asset's source directory (or file) to the patch dir\n  const sourceDir = dirname(entry.source);\n  const sourceName = basename(entry.source);\n\n  // If source is a file in a directory (e.g., skills/overview/SKILL.md), copy the whole dir\n  if (existsSync(sourceDir)) {\n    cpSync(sourceDir, dest, { recursive: true });\n  }\n\n  return dest;\n}\n\n/**\n * Generate a unified diff between an original and patched directory using `diff -ruN`.\n *\n * @param originalDir - Unmodified copy of the asset directory\n * @param patchedDir - Modified copy of the asset directory\n * @returns Patch content string, or `null` if there are no differences (or on error)\n * @docLink packages/core/api-reference#generate-patch\n */\nexport function generatePatch(originalDir: string, patchedDir: string): string | null {\n  const r = spawnSync(\"diff\", [\"-ruN\", originalDir, patchedDir], {\n    encoding: \"utf8\",\n    stdio: \"pipe\",\n  });\n\n  // diff returns 0 if no differences, 1 if differences, 2 on error\n  if (r.status === 0) return null; // no differences\n  if (r.status === 1) return r.stdout;\n  return null; // error\n}\n\n/**\n * Apply a unified diff patch file to a directory using `patch -p1`.\n *\n * @param targetDir - Directory to apply the patch to\n * @param patchFile - Path to the `.patch` file\n * @returns `true` on success, `false` if the patch file is missing or the command fails\n * @docLink packages/core/api-reference#apply-patch\n */\nexport function applyPatch(targetDir: string, patchFile: string): boolean {\n  if (!existsSync(patchFile)) return false;\n  const r = spawnSync(\"patch\", [\"-p1\", \"-d\", targetDir, \"-i\", patchFile], {\n    stdio: \"pipe\",\n  });\n  return r.status === 0;\n}\n\n/**\n * Return the paths of all `.patch` files in a directory.\n *\n * @param patchDir - Directory to scan for `.patch` files\n * @returns Array of absolute paths; empty array when `patchDir` does not exist\n * @docLink packages/core/api-reference#list-patches\n */\nexport function listPatches(patchDir: string): string[] {\n  if (!existsSync(patchDir)) return [];\n  return readdirSync(patchDir)\n    .filter((f) => f.endsWith(\".patch\"))\n    .map((f) => join(patchDir, f));\n}\n\n/**\n * Write patch content to a file, creating parent directories as needed.\n *\n * @param patchPath - Destination file path (including `.patch` extension)\n * @param content - Unified diff content to write\n * @docLink packages/core/api-reference#save-patch\n */\nexport function savePatch(patchPath: string, content: string): void {\n  mkdirSync(dirname(patchPath), { recursive: true });\n  writeFileSync(patchPath, content, \"utf8\");\n}\n\n/**\n * Read the content of a patch file.\n *\n * @param patchPath - Path to the `.patch` file\n * @returns File content as a string, or `null` if the file does not exist\n * @docLink packages/core/api-reference#read-patch\n */\nexport function readPatch(patchPath: string): string | null {\n  if (!existsSync(patchPath)) return null;\n  return readFileSync(patchPath, \"utf8\");\n}\n","/**\n * User-layer runtime settings.\n *\n * SkaileSettings represents the personal, machine-specific overrides stored in\n * .skaile/settings.json (gitignored). Project-level defaults (framework, agent\n * definition, resource connections, hooks) belong in skaile.yaml via SkWorkspaceConfig.\n *\n * Resolution order (highest priority first):\n *   1. CLI flags / API overrides\n *   2. Environment variables (API keys only)\n *   3. .skaile/settings.json  (project-local, walking upward)\n *   4. ~/.skaile/settings.json (user global)\n *   5. skaile.yaml defaults:  (via resolveSkWorkspaceConfig — no duplicate YAML parser)\n *   6. Built-in SETTINGS_DEFAULTS\n */\n\nimport fs from \"node:fs\";\nimport fsp from \"node:fs/promises\";\nimport os from \"node:os\";\nimport path from \"node:path\";\nimport { resolveSkWorkspaceConfig } from \"./workspace-config.js\";\n\n// ── Types ──────────────────────────────────────────────────────────────────\n\n/**\n * All supported LLM and voice provider identifiers.\n * @docLink packages/core/settings#all-providers\n */\nexport const ALL_PROVIDERS = [\n  \"anthropic\",\n  \"openai\",\n  \"google\",\n  \"mistral\",\n  \"groq\",\n  \"openrouter\",\n  \"deepseek\",\n  \"xai\",\n  \"together\",\n  \"fireworks\",\n  \"deepgram\",\n  \"elevenlabs\",\n] as const;\n\n/**\n * Union of supported LLM and voice provider identifiers.\n * @docLink packages/core/settings#provider\n */\nexport type Provider = (typeof ALL_PROVIDERS)[number];\n\n/**\n * Personal runtime settings — stored in .skaile/settings.json (gitignored).\n * Contains only user-specific overrides: credentials, preferred model/driver.\n *\n * Project-level config (framework, resources, hooks, agent definition) lives\n * in skaile.yaml as SkWorkspaceConfig. App-specific fields (voice, domains)\n * are added by forge-common-backend via AppSettings.\n * @docLink packages/core/settings#skaile-settings\n */\nexport interface SkaileSettings {\n  /** Active LLM provider identifier (e.g. \"anthropic\", \"openai\"). */\n  provider?: string;\n  /** Active model identifier (e.g. \"claude-sonnet-4-6\"). */\n  model?: string;\n  /** Bridge driver to use: \"omp\", \"claude-sdk\", or \"codex\". */\n  driver?: string;\n  /** API keys keyed by provider identifier. Merged with env-var keys at resolution time. */\n  apiKeys?: Record<string, string>;\n  /** Framework install path overrides. Normally derived from skaile.yaml defaults. */\n  skillsDir?: string;\n  /** Override for the agents directory. Normally derived from skaile.yaml defaults. */\n  agentsDir?: string;\n  /** Override for the prompts directory. Normally derived from skaile.yaml defaults. */\n  promptsDir?: string;\n  /** AI Asset Store API URL (default: https://store.skaile.ai) */\n  storeUrl?: string;\n  /** JWT access token for the AI Asset Store */\n  storeJwt?: string;\n  /** Refresh token for JWT renewal */\n  storeRefreshToken?: string;\n}\n\n/**\n * Built-in default settings. Lowest-priority layer in resolveSettings().\n * Override via .skaile/settings.json, ~/.skaile/settings.json, or env vars.\n * @docLink packages/core/settings#settings-defaults\n */\nexport const SETTINGS_DEFAULTS: SkaileSettings = {\n  apiKeys: {},\n  driver: \"omp\",\n  provider: \"anthropic\",\n  model: \"claude-sonnet-4-6\",\n};\n\n// ── Legacy field mapping ───────────────────────────────────────────────────\n\nconst LEGACY_FIELD_MAP: Record<string, keyof SkaileSettings> = {\n  defaultProvider: \"provider\",\n  defaultModel: \"model\",\n  defaultAgentType: \"driver\",\n};\n\n/**\n * Rename legacy field names in a raw parsed settings object to their current equivalents.\n * Maps `defaultProvider` → `provider`, `defaultModel` → `model`, `defaultAgentType` → `driver`.\n *\n * @param raw - Raw object from JSON.parse of a settings file\n * @returns Settings with legacy keys renamed to current ones\n * @docLink packages/core/settings#map-legacy-fields\n */\nexport function mapLegacyFields(raw: Record<string, unknown>): SkaileSettings {\n  const result: Record<string, unknown> = {};\n  for (const [key, value] of Object.entries(raw)) {\n    const mapped = LEGACY_FIELD_MAP[key];\n    if (mapped) {\n      if (!(mapped in result) || result[mapped] == null) result[mapped] = value;\n    } else {\n      result[key] = value;\n    }\n  }\n  return result as SkaileSettings;\n}\n\n// ── Paths ──────────────────────────────────────────────────────────────────\n\nconst SKAILE_DIR = \".skaile\";\nconst SETTINGS_FILE = \"settings.json\";\n\n/**\n * Return the path to the user-global settings file: `~/.skaile/settings.json`.\n * @docLink packages/core/settings#global-settings-path\n */\nexport function globalSettingsPath(): string {\n  return path.join(os.homedir(), SKAILE_DIR, SETTINGS_FILE);\n}\n\n/**\n * Return the path to the project-local settings file: `<projectDir>/.skaile/settings.json`.\n *\n * @param projectDir - Absolute path to the project root\n * @returns Absolute path to the project settings file\n * @docLink packages/core/settings#project-settings-path\n */\nexport function projectSettingsPath(projectDir: string): string {\n  return path.join(projectDir, SKAILE_DIR, SETTINGS_FILE);\n}\n\n// ── I/O ────────────────────────────────────────────────────────────────────\n\n/**\n * Load and parse a settings JSON file, merging over SETTINGS_DEFAULTS.\n * Returns defaults if the file does not exist or cannot be parsed.\n *\n * @param filePath - Absolute path to a settings.json file\n * @returns Parsed settings merged with built-in defaults\n * @docLink packages/core/settings#load-settings\n */\nexport async function loadSettings(filePath: string): Promise<SkaileSettings> {\n  try {\n    const raw = await fsp.readFile(filePath, \"utf-8\");\n    return { ...SETTINGS_DEFAULTS, ...mapLegacyFields(JSON.parse(raw)) };\n  } catch {\n    return { ...SETTINGS_DEFAULTS };\n  }\n}\n\n/**\n * Persist settings to a JSON file, creating parent directories as needed.\n *\n * @param settings - Settings object to serialize\n * @param filePath - Absolute path to write the settings.json file\n * @docLink packages/core/settings#save-settings\n */\nexport async function saveSettings(settings: SkaileSettings, filePath: string): Promise<void> {\n  await fsp.mkdir(path.dirname(filePath), { recursive: true });\n  await fsp.writeFile(filePath, JSON.stringify(settings, null, 2), \"utf-8\");\n}\n\n/**\n * Walk upward from `projectDir` (max 10 levels) and collect all\n * `.skaile/settings.json` paths found along the way.\n * Results are ordered nearest-to-root first.\n *\n * @param projectDir - Starting directory for the upward walk\n * @returns Array of absolute paths to settings files found\n * @docLink packages/core/settings#walk-for-settings\n */\nexport function walkForSettings(projectDir: string): string[] {\n  const found: string[] = [];\n  let dir = path.resolve(projectDir);\n  const root = path.parse(dir).root;\n  for (let i = 0; i < 10; i++) {\n    const candidate = path.join(dir, SKAILE_DIR, SETTINGS_FILE);\n    if (fs.existsSync(candidate)) found.push(candidate);\n    const parent = path.dirname(dir);\n    if (parent === dir || parent === root) break;\n    dir = parent;\n  }\n  return found;\n}\n\n// ── Resolution ─────────────────────────────────────────────────────────────\n\nfunction mergeSettings(base: SkaileSettings, source: Partial<SkaileSettings>): SkaileSettings {\n  const result = { ...base };\n  for (const [key, value] of Object.entries(source)) {\n    if (value !== undefined && value !== null && value !== \"\") {\n      if (key === \"apiKeys\" && typeof value === \"object\") {\n        result.apiKeys = { ...result.apiKeys, ...(value as Record<string, string>) };\n      } else {\n        (result as any)[key] = value;\n      }\n    }\n  }\n  return result;\n}\n\n/** Derive a SkaileSettings-compatible layer from SkWorkspaceConfig agent_config.default. */\nfunction settingsFromWorkspaceConfig(projectDir: string): SkaileSettings {\n  try {\n    const ws = resolveSkWorkspaceConfig(projectDir);\n    // Read agent_config.default\n    const p = ws.agent_config?.default;\n    if (!p) return {};\n    const result: SkaileSettings = {};\n    if (p.driver) result.driver = p.driver;\n    if (p.provider) result.provider = p.provider;\n    if (p.model) result.model = p.model;\n    if (p.skills_dir) result.skillsDir = p.skills_dir;\n    if (p.agents_dir) result.agentsDir = p.agents_dir;\n    if (p.prompts_dir) result.promptsDir = p.prompts_dir;\n    return result;\n  } catch {\n    return {};\n  }\n}\n\n// ── Migration ──────────────────────────────────────────────────────────────\n\nconst _migrated = new Set<string>();\n\n/**\n * One-time migration from old config locations to .skaile/settings.json.\n * Does not delete old files — user can do that manually.\n * @docLink packages/core/settings#migrate-settings\n */\nexport async function migrateSettings(projectDir: string): Promise<void> {\n  const resolved = path.resolve(projectDir);\n  if (_migrated.has(resolved)) return;\n\n  const targetPath = projectSettingsPath(resolved);\n  if (fs.existsSync(targetPath)) {\n    _migrated.add(resolved);\n    return;\n  }\n\n  const sources: Record<string, unknown>[] = [];\n\n  // Old location 1: data/settings.json (forge-project)\n  const dataSettings = path.join(resolved, \"data\", \"settings.json\");\n  if (fs.existsSync(dataSettings)) {\n    try {\n      sources.push(JSON.parse(fs.readFileSync(dataSettings, \"utf-8\")));\n    } catch {}\n  }\n\n  // Old location 2: .cf/settings.json (forge-concept)\n  const cfSettings = path.join(resolved, \".cf\", \"settings.json\");\n  if (fs.existsSync(cfSettings)) {\n    try {\n      sources.push(JSON.parse(fs.readFileSync(cfSettings, \"utf-8\")));\n    } catch {}\n  }\n\n  // Old location 3: .skaile/config.json (old SkailConfig)\n  const oldConfig = path.join(resolved, \".skaile\", \"config.json\");\n  if (fs.existsSync(oldConfig)) {\n    try {\n      sources.push(JSON.parse(fs.readFileSync(oldConfig, \"utf-8\")));\n    } catch {}\n  }\n\n  if (sources.length > 0) {\n    let merged: SkaileSettings = {};\n    for (const source of sources) {\n      merged = mergeSettings(merged, mapLegacyFields(source as Record<string, unknown>));\n    }\n    await saveSettings(merged, targetPath);\n  }\n\n  _migrated.add(resolved);\n}\n\n/**\n * Resolve effective settings through the 6-layer priority chain:\n * overrides > env vars (PREFERRED_PROVIDER, PREFERRED_MODEL, *_API_KEY) >\n * .skaile/settings.json (walks upward) > ~/.skaile/settings.json >\n * skaile.yaml agent_config defaults > SETTINGS_DEFAULTS.\n *\n * @param projectDir - Root directory of the project being operated on\n * @param overrides - Optional top-priority overrides (CLI flags, API body)\n * @returns Merged effective settings\n * @docLink packages/core/settings#resolve-settings\n */\nexport async function resolveSettings(\n  projectDir: string,\n  overrides?: Partial<SkaileSettings>,\n): Promise<SkaileSettings> {\n  await migrateSettings(projectDir);\n\n  // Base: built-in defaults\n  let merged: SkaileSettings = { ...SETTINGS_DEFAULTS };\n\n  // Layer: workspace config defaults (skaile.yaml via resolveSkWorkspaceConfig)\n  merged = mergeSettings(merged, settingsFromWorkspaceConfig(projectDir));\n\n  // Layer: user global settings\n  const globalPath = globalSettingsPath();\n  if (fs.existsSync(globalPath)) {\n    try {\n      const raw = JSON.parse(fs.readFileSync(globalPath, \"utf-8\"));\n      merged = mergeSettings(merged, mapLegacyFields(raw));\n    } catch {}\n  }\n\n  // Layer: project-local .skaile/settings.json (walking upward, farthest first)\n  const settingsFiles = walkForSettings(projectDir);\n  for (const filePath of settingsFiles.reverse()) {\n    if (path.resolve(filePath) === path.resolve(globalPath)) continue;\n    try {\n      const raw = JSON.parse(fs.readFileSync(filePath, \"utf-8\"));\n      merged = mergeSettings(merged, mapLegacyFields(raw));\n    } catch {}\n  }\n\n  // Layer: environment variables (API keys + preferred provider/model)\n  const envKeys = detectEnvApiKeys();\n  if (Object.keys(envKeys).length > 0) {\n    merged.apiKeys = { ...merged.apiKeys, ...envKeys };\n  }\n  if (process.env.PREFERRED_PROVIDER) merged.provider = process.env.PREFERRED_PROVIDER;\n  if (process.env.PREFERRED_MODEL) merged.model = process.env.PREFERRED_MODEL;\n\n  // Layer: explicit overrides\n  if (overrides) merged = mergeSettings(merged, overrides);\n\n  return merged;\n}\n\n// ── Provider / API key helpers ─────────────────────────────────────────────\n\n/**\n * Return the environment variable name for a provider's API key.\n * e.g. `providerEnvKey('anthropic')` → `'ANTHROPIC_API_KEY'`\n *\n * @param provider - Provider identifier (e.g. \"anthropic\", \"openai\")\n * @returns Environment variable name for that provider's API key\n * @docLink packages/core/settings#provider-env-key\n */\nexport function providerEnvKey(provider: string): string {\n  return `${provider.toUpperCase().replace(/[^A-Z0-9]/g, \"_\")}_API_KEY`;\n}\n\n/**\n * Return the active API key for the given provider.\n * The matching environment variable (`*_API_KEY`) takes priority over\n * the value stored in `settings.apiKeys`.\n *\n * @param provider - Provider identifier (e.g. \"anthropic\")\n * @param settings - Current effective settings\n * @returns API key string, or undefined if not configured\n * @docLink packages/core/settings#resolve-api-key\n */\nexport function resolveApiKey(provider: string, settings: SkaileSettings): string | undefined {\n  return process.env[providerEnvKey(provider)] || settings.apiKeys?.[provider];\n}\n\n/**\n * Return a masked version of an API key for safe logging.\n * Shows only the last four characters (e.g. `'****abc1'`).\n *\n * @param key - Raw API key to mask\n * @returns Masked key string, or empty string if key is falsy\n * @docLink packages/core/settings#mask-api-key\n */\nexport function maskApiKey(key: string): string {\n  return key ? `****${key.slice(-4)}` : \"\";\n}\n\n/**\n * An API key resolved with information about where it came from.\n * @docLink packages/core/settings#resolved-key\n */\nexport interface ResolvedKey {\n  /** Masked API key value (last 4 chars visible). */\n  key: string;\n  /** Whether the key came from an environment variable or stored settings. */\n  source: \"env\" | \"stored\";\n}\n\n/**\n * Scan process.env (plus any `extraEnv` overrides) for recognized API key\n * variables and return them as a partial `apiKeys` record keyed by provider id.\n *\n * @param extraEnv - Additional environment entries to merge over process.env\n * @returns Partial apiKeys record containing only providers whose key was found\n * @docLink packages/core/settings#detect-env-api-keys\n */\nexport function detectEnvApiKeys(extraEnv?: Record<string, string>): Record<string, string> {\n  const env = { ...process.env, ...extraEnv };\n  const detected: Record<string, string> = {};\n  for (const provider of ALL_PROVIDERS) {\n    const val = env[providerEnvKey(provider)];\n    if (val) detected[provider] = val;\n  }\n  return detected;\n}\n\n/**\n * Build a resolved key map for all known providers with source info and masked values.\n * Env-var keys take priority over stored keys when both exist.\n *\n * @param settings - Current effective settings (provides stored apiKeys)\n * @param envKeys - Keys detected from environment (e.g. from detectEnvApiKeys())\n * @returns Map from provider id to resolved key info; omits providers with no key\n * @docLink packages/core/settings#resolve-all-keys\n */\nexport function resolveAllKeys(\n  settings: SkaileSettings,\n  envKeys: Record<string, string>,\n): Record<string, ResolvedKey> {\n  const result: Record<string, ResolvedKey> = {};\n  for (const provider of ALL_PROVIDERS) {\n    const envVal = envKeys[provider];\n    const storedVal = settings.apiKeys?.[provider];\n    if (envVal) {\n      result[provider] = { key: maskApiKey(envVal), source: \"env\" };\n    } else if (storedVal) {\n      result[provider] = { key: maskApiKey(storedVal), source: \"stored\" };\n    }\n  }\n  return result;\n}\n","/**\n * Runtime-portable subprocess spawning.\n *\n * `node:child_process` is implemented by both Node and Bun, so it is the\n * portable choice — no runtime detection needed (unlike embedded SQLite,\n * which has no shared API; see `logging/sinks/sqlite-runtime.ts`).\n *\n * These helpers wrap `node:child_process` to present a `Bun.Subprocess`-shaped\n * result — web `ReadableStream` stdio plus an `exited` promise — so call sites\n * migrated off `Bun.spawn` keep their stream-reading code unchanged.\n */\nimport { spawn, spawnSync } from \"node:child_process\";\nimport { Readable } from \"node:stream\";\n\nexport interface PortableSpawnOptions {\n  cwd?: string;\n  env?: Record<string, string | undefined>;\n  detached?: boolean;\n}\n\n/** A spawned process with stdout/stderr piped. Mirrors the shape of `Bun.Subprocess`. */\nexport interface PortableSubprocess {\n  /** OS process id, or -1 if the process failed to spawn. */\n  readonly pid: number;\n  readonly stdout: ReadableStream<Uint8Array>;\n  readonly stderr: ReadableStream<Uint8Array>;\n  /** Resolves with the exit code once the process closes (-1 on spawn error). */\n  readonly exited: Promise<number>;\n  kill(signal?: number | NodeJS.Signals): void;\n}\n\nexport interface PortableSpawnSyncResult {\n  /** Exit code; -1 when the process did not exit cleanly. */\n  exitCode: number;\n  stdout: string;\n  stderr: string;\n}\n\n/**\n * Spawn a subprocess with stdout/stderr piped. Works under Node and Bun.\n *\n * @param cmd - Command and arguments, e.g. `[\"docker\", \"ps\"]`.\n */\nexport function portableSpawn(cmd: string[], opts: PortableSpawnOptions = {}): PortableSubprocess {\n  const [bin, ...args] = cmd;\n  if (!bin) throw new Error(\"portableSpawn: empty command\");\n  const child = spawn(bin, args, {\n    cwd: opts.cwd,\n    env: opts.env ?? process.env,\n    stdio: [\"ignore\", \"pipe\", \"pipe\"],\n    detached: opts.detached,\n  });\n  const exited = new Promise<number>((resolve) => {\n    child.on(\"close\", (code) => resolve(code ?? 0));\n    child.on(\"error\", () => resolve(-1));\n  });\n  return {\n    pid: child.pid ?? -1,\n    stdout: Readable.toWeb(child.stdout as Readable) as unknown as ReadableStream<Uint8Array>,\n    stderr: Readable.toWeb(child.stderr as Readable) as unknown as ReadableStream<Uint8Array>,\n    exited,\n    kill: (signal) => {\n      if (opts.detached && child.pid) {\n        try {\n          process.kill(-child.pid, signal);\n          return;\n        } catch {\n          /* fall back to killing the direct child */\n        }\n      }\n      child.kill(signal);\n    },\n  };\n}\n\n/**\n * Run a subprocess to completion synchronously, capturing stdout/stderr as\n * UTF-8 strings. Works under Node and Bun.\n *\n * @param cmd - Command and arguments, e.g. `[\"docker\", \"info\"]`.\n */\nexport function portableSpawnSync(\n  cmd: string[],\n  opts: PortableSpawnOptions = {},\n): PortableSpawnSyncResult {\n  const [bin, ...args] = cmd;\n  if (!bin) throw new Error(\"portableSpawnSync: empty command\");\n  const result = spawnSync(bin, args, {\n    cwd: opts.cwd,\n    env: opts.env ?? process.env,\n    encoding: \"utf8\",\n  });\n  return {\n    exitCode: result.status ?? -1,\n    stdout: result.stdout ?? \"\",\n    stderr: result.stderr ?? \"\",\n  };\n}\n","/**\n * Comment-preserving editor for skaile.yaml files.\n *\n * Uses the `yaml` library's Document API to parse into an AST that retains\n * comments, blank lines, and formatting. Mutations are applied to the AST\n * and serialized back — untouched sections remain byte-identical.\n *\n * Usage:\n *\n *   import { WorkspaceYamlEditor } from '@skaile/workspaces/core'\n *\n *   const editor = WorkspaceYamlEditor.load('/project/skaile.yaml')\n *   editor.setAgentConfig('default', { driver: 'claude-sdk', model: 'claude-sonnet-4-6' })\n *   editor.setSource({ url: 'https://github.com/skaile-ai/ai-assets' })\n *   editor.save()\n */\n\nimport { existsSync, readFileSync, writeFileSync } from \"node:fs\";\nimport { Document, isMap, isSeq, parseDocument, type YAMLMap } from \"yaml\";\nimport type {\n  AgentConfigProfile,\n  AssetEntry,\n  ConnectorDeclaration,\n  OverrideEntry,\n  SourceEntry,\n  StoreEntry,\n} from \"./workspace-config.js\";\n\n/**\n * Comment-preserving editor for `skaile.yaml` files.\n * Uses the `yaml` library's Document AST so untouched sections remain byte-identical.\n * Create with `WorkspaceYamlEditor.load(filePath)` or `WorkspaceYamlEditor.create(filePath)`.\n * @docLink packages/core/workspace-config#workspace-yaml-editor\n */\nexport class WorkspaceYamlEditor {\n  readonly path: string;\n  private doc: Document;\n\n  private constructor(path: string, doc: Document) {\n    this.path = path;\n    this.doc = doc;\n  }\n\n  /** Load an existing skaile.yaml file. */\n  static load(filePath: string): WorkspaceYamlEditor {\n    if (!existsSync(filePath)) {\n      throw new Error(`File not found: ${filePath}`);\n    }\n    const raw = readFileSync(filePath, \"utf-8\");\n    const doc = parseDocument(raw);\n    return new WorkspaceYamlEditor(filePath, doc);\n  }\n\n  /** Create a new empty document (for use when no file exists yet). */\n  static create(filePath: string): WorkspaceYamlEditor {\n    const doc = new Document({});\n    return new WorkspaceYamlEditor(filePath, doc);\n  }\n\n  /** Write the document back to disk, preserving comments and formatting. */\n  save(): void {\n    writeFileSync(this.path, this.doc.toString());\n  }\n\n  /** Return the serialized YAML string without writing to disk. */\n  toString(): string {\n    return this.doc.toString();\n  }\n\n  // ── Scalar fields ──────────────────────────────────────────────────────────\n\n  /** Get a top-level scalar field (name, description). */\n  get(key: \"name\" | \"description\"): string | undefined {\n    const val = this.doc.get(key);\n    return val != null ? String(val) : undefined;\n  }\n\n  /** Set a top-level scalar field. */\n  set(key: \"name\" | \"description\", value: string): void {\n    this.doc.set(key, value);\n  }\n\n  // ── Agent config ──────────────────────────────────────────────────────────\n\n  /**\n   * Get an agent config profile by name (usually \"default\").\n   * Reads from `agent-config` (canonical YAML key).\n   */\n  getAgentConfig(profile = \"default\"): AgentConfigProfile | undefined {\n    const section = this._getAgentConfigSection();\n    if (!section) return undefined;\n    const val = section.get(profile);\n    return val && typeof val === \"object\" ? (val as unknown as AgentConfigProfile) : undefined;\n  }\n\n  /**\n   * Set fields on an agent config profile. Merges with existing values —\n   * only the provided fields are overwritten.\n   */\n  setAgentConfig(profile: string, values: Partial<AgentConfigProfile>): void {\n    let section = this._getAgentConfigSection();\n    if (!section) {\n      // Create the section. Use 'agent-config' as the canonical YAML key.\n      this.doc.set(\"agent-config\", { [profile]: {} });\n      section = this._getAgentConfigSection()!;\n    }\n\n    const existing = section.get(profile, true);\n    if (!existing || !isMap(existing)) {\n      section.set(profile, { ...values });\n      return;\n    }\n\n    for (const [k, v] of Object.entries(values)) {\n      if (v === undefined) continue;\n      existing.set(k, v);\n    }\n  }\n\n  /**\n   * Delete a field from an agent config profile.\n   */\n  deleteAgentConfigField(profile: string, field: string): void {\n    const section = this._getAgentConfigSection();\n    if (!section) return;\n    const profileNode = section.get(profile, true);\n    if (isMap(profileNode)) {\n      profileNode.delete(field);\n    }\n  }\n\n  private _getAgentConfigSection(): YAMLMap | undefined {\n    // Try canonical 'agent-config' first, then 'agent_config'\n    const node = this.doc.get(\"agent-config\", true) ?? this.doc.get(\"agent_config\", true);\n    return isMap(node) ? (node as YAMLMap) : undefined;\n  }\n\n  // ── Publisher / version (publication half) ──────────────────────────────────\n\n  /** Get the publication-half `publisher:` field. */\n  getPublisher(): string | undefined {\n    const v = this.doc.get(\"publisher\");\n    return v != null ? String(v) : undefined;\n  }\n\n  /** Set the publication-half `publisher:` field. */\n  setPublisher(p: string): void {\n    this.doc.set(\"publisher\", p);\n  }\n\n  /** Get the publication-half `version:` field. */\n  getVersion(): string | undefined {\n    const v = this.doc.get(\"version\");\n    return v != null ? String(v) : undefined;\n  }\n\n  /** Set the publication-half `version:` field. */\n  setVersion(v: string): void {\n    this.doc.set(\"version\", v);\n  }\n\n  // ── Connectors ─────────────────────────────────────────────────────────────\n\n  /** Get all connectors. */\n  getConnectors(): ConnectorDeclaration[] {\n    const val = this.doc.get(\"connectors\") ?? this.doc.get(\"data_resources\");\n    if (!Array.isArray(val)) return [];\n    return val as ConnectorDeclaration[];\n  }\n\n  /** Add or update a connector by id. */\n  setConnector(connector: ConnectorDeclaration): void {\n    const key = \"connectors\";\n    const node = this.doc.get(key, true);\n\n    if (!node || !isSeq(node)) {\n      this.doc.set(key, this.doc.createNode([connector]));\n      return;\n    }\n\n    let found = false;\n    for (let i = 0; i < node.items.length; i++) {\n      const item = node.items[i];\n      if (isMap(item) && (item as YAMLMap).get(\"id\") === connector.id) {\n        node.set(i, this.doc.createNode(connector));\n        found = true;\n        break;\n      }\n    }\n\n    if (!found) {\n      node.add(this.doc.createNode(connector));\n    }\n  }\n\n  /** Remove a connector by id. */\n  removeConnector(id: string): boolean {\n    const key = this.doc.has(\"connectors\") ? \"connectors\" : \"data_resources\";\n    const node = this.doc.get(key, true);\n    if (!node || !isSeq(node)) return false;\n\n    for (let i = 0; i < node.items.length; i++) {\n      const item = node.items[i];\n      if (isMap(item) && (item as YAMLMap).get(\"id\") === id) {\n        node.delete(i);\n        return true;\n      }\n    }\n    return false;\n  }\n\n  // ── Plugins ────────────────────────────────────────────────────────────────\n\n  /** Get all `plugins:` specifiers. */\n  getPlugins(): string[] {\n    const node = this.doc.get(\"plugins\", true);\n    if (!isSeq(node)) return [];\n    const out: string[] = [];\n    for (const item of node.items) {\n      const cur = item != null && typeof item === \"object\" && \"value\" in item ? item.value : item;\n      if (typeof cur === \"string\") out.push(cur);\n    }\n    return out;\n  }\n\n  /**\n   * Add a plugin specifier to `plugins:`, deduped by package name.\n   * If an entry with the same package name exists it is replaced (so a version\n   * bump re-pins in place); otherwise the spec is appended.\n   *\n   * @param spec - npm specifier, e.g. `\"@skaile/provider-fly@^0.1.0\"`.\n   * @param nameOf - Extracts the package name from a spec (caller passes `parseSpec`-derived names).\n   * @returns `true` when an existing entry was replaced, `false` when appended.\n   */\n  addPlugin(spec: string, nameOf: (s: string) => string): boolean {\n    const node = this.doc.get(\"plugins\", true);\n    if (!node || !isSeq(node)) {\n      this.doc.set(\"plugins\", this.doc.createNode([spec]));\n      return false;\n    }\n\n    const wantName = nameOf(spec);\n    for (let i = 0; i < node.items.length; i++) {\n      const item = node.items[i];\n      const cur = item != null && typeof item === \"object\" && \"value\" in item ? item.value : item;\n      if (typeof cur === \"string\" && nameOf(cur) === wantName) {\n        node.set(i, this.doc.createNode(spec));\n        return true;\n      }\n    }\n    node.add(this.doc.createNode(spec));\n    return false;\n  }\n\n  /**\n   * Remove the `plugins:` entry whose package name matches `name`.\n   *\n   * @param name - Package name to remove (e.g. `\"@skaile/provider-fly\"`).\n   * @param nameOf - Extracts the package name from a spec.\n   * @returns `true` when an entry was removed.\n   */\n  removePlugin(name: string, nameOf: (s: string) => string): boolean {\n    const node = this.doc.get(\"plugins\", true);\n    if (!node || !isSeq(node)) return false;\n\n    for (let i = 0; i < node.items.length; i++) {\n      const item = node.items[i];\n      const cur = item != null && typeof item === \"object\" && \"value\" in item ? item.value : item;\n      if (typeof cur === \"string\" && nameOf(cur) === name) {\n        node.delete(i);\n        return true;\n      }\n    }\n    return false;\n  }\n\n  // ── Sources ────────────────────────────────────────────────────────────────\n\n  /** Get all source entries (`{url, pin?}`). */\n  getSources(): SourceEntry[] {\n    const val = this.doc.get(\"sources\");\n    if (!Array.isArray(val)) return [];\n    return val as SourceEntry[];\n  }\n\n  /**\n   * Add or update a source entry, matched by `url`.\n   * If an entry with the same url exists, it is replaced.\n   */\n  setSource(entry: SourceEntry): void {\n    const node = this.doc.get(\"sources\", true);\n    if (!node || !isSeq(node)) {\n      this.doc.set(\"sources\", this.doc.createNode([entry]));\n      return;\n    }\n    let found = false;\n    for (let i = 0; i < node.items.length; i++) {\n      const item = node.items[i];\n      if (isMap(item) && (item as YAMLMap).get(\"url\") === entry.url) {\n        node.set(i, this.doc.createNode(entry));\n        found = true;\n        break;\n      }\n    }\n    if (!found) node.add(this.doc.createNode(entry));\n  }\n\n  /** Remove a source entry by url. Returns true when an entry was removed. */\n  removeSource(url: string): boolean {\n    const node = this.doc.get(\"sources\", true);\n    if (!node || !isSeq(node)) return false;\n    for (let i = 0; i < node.items.length; i++) {\n      const item = node.items[i];\n      if (isMap(item) && (item as YAMLMap).get(\"url\") === url) {\n        node.delete(i);\n        return true;\n      }\n    }\n    return false;\n  }\n\n  // ── Stores ─────────────────────────────────────────────────────────────────\n\n  /** Get all store entries (`{url}`). */\n  getStores(): StoreEntry[] {\n    const val = this.doc.get(\"stores\");\n    if (!Array.isArray(val)) return [];\n    return val as StoreEntry[];\n  }\n\n  /** Add or update a store entry, matched by `url`. */\n  setStore(entry: StoreEntry): void {\n    const node = this.doc.get(\"stores\", true);\n    if (!node || !isSeq(node)) {\n      this.doc.set(\"stores\", this.doc.createNode([entry]));\n      return;\n    }\n    let found = false;\n    for (let i = 0; i < node.items.length; i++) {\n      const item = node.items[i];\n      if (isMap(item) && (item as YAMLMap).get(\"url\") === entry.url) {\n        node.set(i, this.doc.createNode(entry));\n        found = true;\n        break;\n      }\n    }\n    if (!found) node.add(this.doc.createNode(entry));\n  }\n\n  /** Remove a store entry by url. Returns true when an entry was removed. */\n  removeStore(url: string): boolean {\n    const node = this.doc.get(\"stores\", true);\n    if (!node || !isSeq(node)) return false;\n    for (let i = 0; i < node.items.length; i++) {\n      const item = node.items[i];\n      if (isMap(item) && (item as YAMLMap).get(\"url\") === url) {\n        node.delete(i);\n        return true;\n      }\n    }\n    return false;\n  }\n\n  // ── Overrides ────────────────────────────────────────────────────────────────\n\n  /** Get all override entries (`{ref, source, reason}`). */\n  getOverrides(): OverrideEntry[] {\n    const val = this.doc.get(\"overrides\");\n    if (!Array.isArray(val)) return [];\n    return val as OverrideEntry[];\n  }\n\n  /** Add or update an override entry, matched by `ref`. */\n  setOverride(entry: OverrideEntry): void {\n    const node = this.doc.get(\"overrides\", true);\n    if (!node || !isSeq(node)) {\n      this.doc.set(\"overrides\", this.doc.createNode([entry]));\n      return;\n    }\n    let found = false;\n    for (let i = 0; i < node.items.length; i++) {\n      const item = node.items[i];\n      if (isMap(item) && (item as YAMLMap).get(\"ref\") === entry.ref) {\n        node.set(i, this.doc.createNode(entry));\n        found = true;\n        break;\n      }\n    }\n    if (!found) node.add(this.doc.createNode(entry));\n  }\n\n  /** Remove an override entry by ref. Returns true when an entry was removed. */\n  removeOverride(ref: string): boolean {\n    const node = this.doc.get(\"overrides\", true);\n    if (!node || !isSeq(node)) return false;\n    for (let i = 0; i < node.items.length; i++) {\n      const item = node.items[i];\n      if (isMap(item) && (item as YAMLMap).get(\"ref\") === ref) {\n        node.delete(i);\n        return true;\n      }\n    }\n    return false;\n  }\n\n  // ── Publication assets ───────────────────────────────────────────────────────\n\n  /** Get all publication-half `assets:` entries. */\n  getPublicationAssets(): AssetEntry[] {\n    const val = this.doc.get(\"assets\");\n    if (!Array.isArray(val)) return [];\n    return val as AssetEntry[];\n  }\n\n  /** Add or update a publication asset entry, matched by `kind` + `name`. */\n  setPublicationAsset(entry: AssetEntry): void {\n    const node = this.doc.get(\"assets\", true);\n    if (!node || !isSeq(node)) {\n      this.doc.set(\"assets\", this.doc.createNode([entry]));\n      return;\n    }\n    let found = false;\n    for (let i = 0; i < node.items.length; i++) {\n      const item = node.items[i];\n      if (\n        isMap(item) &&\n        (item as YAMLMap).get(\"kind\") === entry.kind &&\n        (item as YAMLMap).get(\"name\") === entry.name\n      ) {\n        node.set(i, this.doc.createNode(entry));\n        found = true;\n        break;\n      }\n    }\n    if (!found) node.add(this.doc.createNode(entry));\n  }\n\n  /** Remove a publication asset entry by kind + name. Returns true when removed. */\n  removePublicationAsset(kind: string, name: string): boolean {\n    const node = this.doc.get(\"assets\", true);\n    if (!node || !isSeq(node)) return false;\n    for (let i = 0; i < node.items.length; i++) {\n      const item = node.items[i];\n      if (\n        isMap(item) &&\n        (item as YAMLMap).get(\"kind\") === kind &&\n        (item as YAMLMap).get(\"name\") === name\n      ) {\n        node.delete(i);\n        return true;\n      }\n    }\n    return false;\n  }\n\n  // ── Raw access (escape hatch) ─────────────────────────────────────────────\n\n  /** Get the underlying yaml Document for advanced manipulation. */\n  get document(): Document {\n    return this.doc;\n  }\n}\n"]}

package/dist/chunk-K7WPR77X.js.map

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(meta.metadata as Record<string, unknown> | undefined)?.requires;\n  if (!raw) return [];\n  const list =\n    typeof raw === \"string\"\n      ? raw.split(\",\").map((s) => s.trim())\n      : Array.isArray(raw)\n        ? (raw as string[])\n        : [];\n  return list.filter(Boolean).map(parseDep);\n}\n\n// ── Manifest parsers ──────────────────────────────────────────────────────────\n\n/**\n * Parse a `SKILL.md` file into a `CatalogEntry`.\n * The `kind` field defaults to `\"skill\"` but can be overridden to `\"agent\"` or `\"prompt\"`\n * via the `type:` frontmatter key. Falls back to the parent directory name when `name:` is absent.\n *\n * @param filePath - Absolute path to the `SKILL.md` file\n * @param repoName - Repository name used as the `repository` field of the entry\n * @returns Populated `CatalogEntry` with kind, name, description, version, and requires\n * @docLink packages/core/concepts#from-skill-md\n */\nexport function fromSkillMd(filePath: string, repoName: string): CatalogEntry {\n  const { data: meta } = parseFrontmatter(readFileSync(filePath, \"utf8\"));\n  let kind = String(meta.type ?? \"skill\") as AssetKind;\n  if (![\"skill\", \"agent\", \"prompt\", \"persona\", \"ruleset\", \"knowledge\"].includes(kind))\n    kind = \"skill\";\n  return {\n    name: String(meta.name ?? basename(dirname(filePath))),\n    kind,\n    description: String(meta.description ?? \"\"),\n    source: filePath,\n    publisher: repoName,\n    version: extractVersion(meta),\n    requires: parseRequires(meta),\n    dependencies: [],\n  };\n}\n\n/**\n * Parse an `AGENT.md` file into a `CatalogEntry` with `kind: \"agent\"`.\n * Falls back to the parent directory name when `name:` is absent.\n *\n * @param filePath - Absolute path to the `AGENT.md` file\n * @param repoName - Repository name used as the `repository` field of the entry\n * @returns Populated `CatalogEntry` with kind `\"agent\"`\n * @docLink packages/core/concepts#from-agent-md\n */\nexport function fromAgentMd(filePath: string, repoName: string): CatalogEntry {\n  const { data: meta } = parseFrontmatter(readFileSync(filePath, \"utf8\"));\n  return {\n    name: String(meta.name ?? basename(dirname(filePath))),\n    kind: \"agent\",\n    description: String(meta.description ?? \"\"),\n    source: filePath,\n    publisher: repoName,\n    version: extractVersion(meta),\n    requires: parseRequires(meta),\n    dependencies: [],\n  };\n}\n\n/**\n * Parse an `agent.yaml` file into a `CatalogEntry` with `kind: \"agent\"`.\n * Collects sub-agent dependencies from `requires[]` (new format) and `dependencies[]`\n * (legacy format), skill abilities from `abilities[]`, and contracts from `contracts[]`.\n *\n * @param filePath - Absolute path to the `agent.yaml` file\n * @param repoName - Repository name used as the `repository` field of the entry\n * @returns Populated `CatalogEntry` with kind `\"agent\"` and full dependency graph\n * @docLink packages/core/concepts#from-agent-yaml\n */\nexport function fromAgentYaml(filePath: string, repoName: string): CatalogEntry {\n  let meta: Record<string, unknown> = {};\n  try {\n    meta = (parse(readFileSync(filePath, \"utf8\")) as Record<string, unknown>) ?? {};\n  } catch {}\n\n  const requires: Dependency[] = [];\n\n  // Sub-agent dependencies from requires[] (new format: {name, source, ...})\n  const agentRequires = meta.requires;\n  if (Array.isArray(agentRequires)) {\n    for (const d of agentRequires) {\n      if (typeof d === \"object\" && d !== null && \"name\" in d) {\n        requires.push({\n          kind: \"agent\",\n          name: String((d as Record<string, unknown>).name),\n        });\n      }\n    }\n  }\n\n  // Legacy sub-agent dependencies from dependencies[] (old format: {name, ...})\n  const deps = meta.dependencies;\n  if (Array.isArray(deps)) {\n    for (const d of deps) {\n      if (typeof d === \"object\" && d !== null && \"name\" in d) {\n        requires.push({\n          kind: \"agent\",\n          name: String((d as Record<string, unknown>).name),\n        });\n      }\n    }\n  }\n\n  // Skill abilities referenced in the system prompt\n  const abilities = meta.abilities;\n  if (Array.isArray(abilities)) {\n    for (const a of abilities) {\n      if (typeof a === \"string\" && a) {\n        requires.push({ kind: \"skill\", name: a });\n      }\n    }\n  }\n\n  // Contracts referenced in the system prompt (co-located in skills dir)\n  const contracts = meta.contracts;\n  if (Array.isArray(contracts)) {\n    for (const c of contracts) {\n      if (typeof c === \"string\" && c) {\n        requires.push({ kind: \"contract\", name: c });\n      }\n    }\n  }\n\n  // Mixin composition fields — track catalog refs as requires so `skaile install`\n  // automatically pulls them. Local paths (. or /) are skipped — not catalog assets.\n  for (const [field, defaultKind] of [\n    [\"persona\", \"persona\"],\n    [\"rules\", \"ruleset\"],\n    [\"knowledge\", \"knowledge\"],\n  ] as const) {\n    const refs = meta[field];\n    if (!Array.isArray(refs)) continue;\n    for (const r of refs) {\n      if (typeof r !== \"string\" || !r) continue;\n      if (r.startsWith(\".\") || r.startsWith(\"/\")) continue; // local path — skip\n      // Normalize: if no kind: prefix, inject the default kind\n      const normalized = r.includes(\":\") ? r : `${defaultKind}:${r}`;\n      // Strip @repo and #pin — only kind:name matters for requires\n      const colonIdx = normalized.indexOf(\":\");\n      const kind = normalized.slice(0, colonIdx).trim();\n      let name = normalized.slice(colonIdx + 1).trim();\n      const atIdx = name.indexOf(\"@\");\n      if (atIdx !== -1) name = name.slice(0, atIdx).trim();\n      const hashIdx = name.indexOf(\"#\");\n      if (hashIdx !== -1) name = name.slice(0, hashIdx).trim();\n      if (name) requires.push({ kind, name });\n    }\n  }\n\n  return {\n    name: String(meta.name ?? basename(dirname(filePath))),\n    kind: \"agent\",\n    description: String(meta.description ?? \"\"),\n    source: filePath,\n    publisher: repoName,\n    version: String(meta.version ?? \"\"),\n    requires,\n    dependencies: [],\n  };\n}\n\n/**\n * Parse a `*.prompt.md` file into a `CatalogEntry` with `kind: \"prompt\"`.\n * The name defaults to the filename stem (without the `.prompt.md` suffix)\n * when no `name:` frontmatter key is present.\n *\n * @param filePath - Absolute path to the `.prompt.md` file\n * @param repoName - Repository name used as the `repository` field of the entry\n * @returns Populated `CatalogEntry` with kind `\"prompt\"`\n * @docLink packages/core/concepts#from-prompt-md\n */\nexport function fromPromptMd(filePath: string, repoName: string): CatalogEntry {\n  const { data: meta } = parseFrontmatter(readFileSync(filePath, \"utf8\"));\n  const name = String(meta.name ?? basename(filePath).replace(/\\.prompt\\.md$/, \"\"));\n  return {\n    name,\n    kind: \"prompt\",\n    description: String(meta.description ?? \"\"),\n    source: filePath,\n    publisher: repoName,\n    version: extractVersion(meta),\n    requires: parseRequires(meta),\n    dependencies: [],\n  };\n}\n\n/**\n * Parse a `*.flow.yaml` or `*.flow.json` file into a `CatalogEntry` with `kind: \"flow\"`.\n * The name resolves from `name:` or `id:` frontmatter, falling back to the filename stem.\n *\n * @param filePath - Absolute path to the flow definition file\n * @param repoName - Repository name used as the `repository` field of the entry\n * @returns Populated `CatalogEntry` with kind `\"flow\"`\n * @docLink packages/core/concepts#from-flow-yaml\n */\nexport function fromFlowYaml(filePath: string, repoName: string): CatalogEntry {\n  let meta: Record<string, unknown> = {};\n  try {\n    meta = (parse(readFileSync(filePath, \"utf8\")) as Record<string, unknown>) ?? {};\n  } catch {}\n\n  const stem = basename(filePath)\n    .replace(/\\.flow\\.yaml$/, \"\")\n    .replace(/\\.flow\\.json$/, \"\");\n  return {\n    name: String(meta.name ?? meta.id ?? stem),\n    kind: \"flow\",\n    description: String(meta.description ?? \"\"),\n    source: filePath,\n    publisher: repoName,\n    version: String(meta.version ?? \"\"),\n    requires: parseRequires(meta),\n    dependencies: [],\n  };\n}\n\n/**\n * Parse a `*.bundle.yaml` file into a `CatalogEntry` with `kind: \"bundle\"`.\n * Bundles declare a flat list of string `dependencies` (asset refs) rather than\n * typed `Dependency` objects; both `requires` and `dependencies` are populated.\n *\n * @param filePath - Absolute path to the bundle YAML file\n * @param repoName - Repository name used as the `repository` field of the entry\n * @returns Populated `CatalogEntry` with kind `\"bundle\"`\n * @docLink packages/core/concepts#from-bundle-yaml\n */\nexport function fromBundleYaml(filePath: string, repoName: string): CatalogEntry {\n  let meta: Record<string, unknown> = {};\n  try {\n    meta = (parse(readFileSync(filePath, \"utf8\")) as Record<string, unknown>) ?? {};\n  } catch {}\n\n  const name = String(meta.name ?? basename(filePath).replace(/\\.bundle\\.yaml$/, \"\"));\n\n  const deps = meta.dependencies;\n  const dependencies = Array.isArray(deps) ? (deps as string[]).filter(Boolean) : [];\n\n  return {\n    name,\n    kind: \"bundle\",\n    description: String(meta.description ?? \"\"),\n    source: filePath,\n    publisher: repoName,\n    version: String(meta.version ?? \"\"),\n    requires: parseRequires(meta),\n    dependencies,\n  };\n}\n\n/**\n * Extract a bundle's raw transitive dependency ref strings from its manifest\n * file — the union of its `requires` and `dependencies` lists, kept verbatim\n * (publisher/pin qualifiers preserved, comments dropped by the parser).\n *\n * Supports both `*.bundle.yaml` (top-level `requires`/`dependencies`) and the\n * `BUNDLE.md` frontmatter layout (`requires`/`dependencies`, incl. nested under\n * `metadata`). Unlike {@link parseRequires}, refs are returned as-is — the\n * resolver needs the full `kind:name@<publisher>[#pin]` form, not a\n * publisher-stripped {@link Dependency}.\n *\n * @param filePath - Absolute path to the bundle's `.bundle.yaml` or `BUNDLE.md`.\n * @returns Deduped list of ref strings; `[]` on parse failure or no deps.\n * @docLink packages/core/concepts#bundle-dep-refs\n */\nexport function bundleDepRefs(filePath: string): string[] {\n  let meta: Record<string, unknown> = {};\n  try {\n    meta = filePath.endsWith(\".bundle.yaml\")\n      ? ((parse(readFileSync(filePath, \"utf8\")) as Record<string, unknown>) ?? {})\n      : parseFrontmatter(readFileSync(filePath, \"utf8\")).data;\n  } catch {\n    return [];\n  }\n  const out: string[] = [];\n  const collect = (v: unknown) => {\n    if (Array.isArray(v))\n      for (const x of v) if (typeof x === \"string\" && x.trim()) out.push(x.trim());\n  };\n  collect(meta.requires);\n  collect((meta.metadata as Record<string, unknown> | undefined)?.requires);\n  collect(meta.dependencies);\n  return [...new Set(out)];\n}\n\n/**\n * Parse a `CONTRACT.md` file into a `CatalogEntry` with `kind: \"contract\"`.\n * Falls back to the parent directory name when `name:` is absent.\n *\n * @param filePath - Absolute path to the `CONTRACT.md` file\n * @param repoName - Repository name used as the `repository` field of the entry\n * @returns Populated `CatalogEntry` with kind `\"contract\"`\n * @docLink packages/core/concepts#from-contract-md\n */\nexport function fromContractMd(filePath: string, repoName: string): CatalogEntry {\n  const { data: meta } = parseFrontmatter(readFileSync(filePath, \"utf8\"));\n  return {\n    name: String(meta.name ?? basename(dirname(filePath))),\n    kind: \"contract\",\n    description: String(meta.description ?? \"\"),\n    source: filePath,\n    publisher: repoName,\n    version: extractVersion(meta),\n    requires: parseRequires(meta),\n    dependencies: [],\n  };\n}\n\n/**\n * Parse an `MCP.md` file into a `CatalogEntry` with `kind: \"mcp-server\"`.\n * Falls back to the parent directory name when `name:` is absent.\n *\n * Frontmatter fields (catalog identity):\n *   - `name`        — server name (default: parent dir name)\n *   - `description` — short description\n *   - `version`     — semver\n *   - `keywords`    — array of discovery tags\n *\n * Frontmatter fields (runtime defaults, stored in `metadata`):\n *   - `transport`   — \"stdio\" | \"sse\" | \"http\" (default: \"stdio\")\n *   - `command`     — command to execute (stdio)\n *   - `args`        — command arguments (stdio)\n *   - `env`         — environment variables (stdio)\n *   - `url`         — server URL (sse/http)\n *   - `headers`     — HTTP headers (sse/http)\n *\n * When `mcp:name` appears in `skaile.yaml` `dependencies`, the runner reads\n * these defaults from `metadata` to build a `McpServerDeclaration` without\n * requiring verbose inline config.\n *\n * @param filePath - Absolute path to the `MCP.md` file\n * @param repoName - Repository name used as the `repository` field of the entry\n * @returns Populated `CatalogEntry` with kind `\"mcp-server\"`\n * @docLink packages/core/concepts#from-mcp-server-md\n */\nexport function fromMcpServerMd(filePath: string, repoName: string): CatalogEntry {\n  const { data: meta } = parseFrontmatter(readFileSync(filePath, \"utf8\"));\n\n  // Extract runtime defaults into metadata\n  const metadata: Record<string, unknown> = {};\n  if (meta.transport) metadata.transport = String(meta.transport);\n  if (meta.command) metadata.command = String(meta.command);\n  if (Array.isArray(meta.args)) metadata.args = meta.args.map(String);\n  if (meta.env && typeof meta.env === \"object\" && !Array.isArray(meta.env)) {\n    metadata.env = meta.env as Record<string, string>;\n  }\n  if (meta.url) metadata.url = String(meta.url);\n  if (meta.headers && typeof meta.headers === \"object\" && !Array.isArray(meta.headers)) {\n    metadata.headers = meta.headers as Record<string, string>;\n  }\n  if (meta.recipe && typeof meta.recipe === \"object\" && !Array.isArray(meta.recipe)) {\n    metadata.recipe = meta.recipe;\n  }\n\n  return {\n    name: String(meta.name ?? basename(dirname(filePath))),\n    kind: \"mcp-server\",\n    description: String(meta.description ?? \"\"),\n    source: filePath,\n    publisher: repoName,\n    version: extractVersion(meta),\n    requires: parseRequires(meta),\n    dependencies: [],\n    metadata: Object.keys(metadata).length > 0 ? metadata : undefined,\n  };\n}\n\n/**\n * Parse a `knowledge.yaml` file into a `CatalogEntry` with `kind: \"knowledge\"`.\n * Falls back to the parent directory name when `name:` is absent.\n *\n * @param filePath - Absolute path to the `knowledge.yaml` file\n * @param repoName - Repository name used as the `repository` field of the entry\n * @returns Populated `CatalogEntry` with kind `\"knowledge\"`\n * @docLink packages/core/concepts#from-knowledge-yaml\n */\nexport function fromKnowledgeYaml(filePath: string, repoName: string): CatalogEntry {\n  let meta: Record<string, unknown> = {};\n  try {\n    meta = (parse(readFileSync(filePath, \"utf8\")) as Record<string, unknown>) ?? {};\n  } catch {}\n  return {\n    name: String(meta.name ?? basename(dirname(filePath))),\n    kind: \"knowledge\",\n    description: String(meta.description ?? \"\"),\n    source: filePath,\n    publisher: repoName,\n    version: String(meta.version ?? \"\"),\n    requires: parseRequires(meta),\n    dependencies: [],\n  };\n}\n\n/**\n * Parse a `CONNECTOR.md` file into a `CatalogEntry` with `kind: \"connector\"`.\n * Falls back to the parent directory name when `name:` is absent.\n *\n * Frontmatter fields (catalog identity):\n *   - `name`        — connector name (default: parent dir name)\n *   - `description` — short description\n *   - `version`     — semver\n *\n * Frontmatter fields (runtime defaults, stored in `metadata`):\n *   - `entry`        — adapter entry point (default: \"./adapter.ts\")\n *   - `npm_deps`     — npm dependencies required by the adapter\n *   - `fields`       — configuration fields the adapter expects\n *   - `health_check` — whether to run a health check on connect\n *\n * The markdown body (below the frontmatter) is stored in `metadata.body`\n * so the runner can inject the connector's skill description into the\n * system prompt when `expose_as_skill` is enabled.\n *\n * @param filePath - Absolute path to the `CONNECTOR.md` file\n * @param repoName - Repository name used as the `repository` field of the entry\n * @returns Populated `CatalogEntry` with kind `\"connector\"`\n * @docLink packages/core/concepts#from-connector-md\n */\nexport function fromConnectorMd(filePath: string, repoName: string): CatalogEntry {\n  const text = readFileSync(filePath, \"utf-8\");\n  const { data: meta, body } = parseFrontmatter(text);\n  const name = String(meta.name ?? basename(dirname(filePath)));\n  return {\n    name,\n    kind: \"connector\" as AssetKind,\n    description: String(meta.description ?? \"\"),\n    source: filePath,\n    publisher: repoName,\n    version: extractVersion(meta),\n    requires: parseRequires(meta),\n    dependencies: [],\n    metadata: {\n      entry: meta.entry ?? \"./adapter.ts\",\n      npm_deps: meta.npm_deps ?? {},\n      fields: meta.fields ?? [],\n      health_check: meta.health_check ?? null,\n      body,\n    },\n  };\n}\n\n// ── Recursive walker ──────────────────────────────────────────────────────────\n\ninterface WalkEntry {\n  path: string;\n  name: string;\n}\n\n/**\n * Recursively yield every file entry under `dir`, sorted alphabetically at each level.\n * Skips `.git` and `node_modules` directories and follows symlinks (resolving to\n * the stat target). `node_modules` is excluded because Bun's `node_modules/.bun/...`\n * layout contains symlink farms that form cycles when packages reference each other\n * transitively — entering them causes unbounded recursion in this walker.\n *\n * @param dir - Absolute path to the directory to walk\n * @docLink packages/core/concepts#walk-dir\n */\nexport function* walkDir(dir: string): Generator<WalkEntry> {\n  let dirEntries: import(\"node:fs\").Dirent<string>[];\n  try {\n    dirEntries = readdirSync(dir, { withFileTypes: true, encoding: \"utf8\" });\n  } catch {\n    return;\n  }\n  for (const e of dirEntries.sort((a, b) => (a.name < b.name ? -1 : 1))) {\n    const full = join(dir, e.name);\n    if (e.isSymbolicLink()) {\n      try {\n        if (statSync(full).isDirectory()) yield* walkDir(full);\n        else yield { path: full, name: e.name };\n      } catch {}\n    } else if (e.isDirectory()) {\n      if (e.name !== \".git\" && e.name !== \"node_modules\") yield* walkDir(full);\n    } else if (e.isFile()) {\n      yield { path: full, name: e.name };\n    }\n  }\n}\n\n// ── Public scanner ────────────────────────────────────────────────────────────\n\n/**\n * Walk `root` recursively and return a `CatalogEntry` for every recognized asset manifest found.\n *\n * Recognized filenames: `SKILL.md`, `AGENT.md`, `agent.yaml`, `CONTRACT.md`, `MCP.md`,\n * `CONNECTOR.md`, `*.prompt.md`, `*.bundle.yaml`, `*.flow.yaml`, `*.flow.json`.\n *\n * When two entries share the same `kind:name` key, the one with the alphabetically\n * later source path wins (consistent with catalog precedence rules).\n *\n * @param root - Absolute path to the directory tree to scan\n * @param repoName - Repository name attached to every produced entry\n * @returns Array of deduplicated `CatalogEntry` objects, one per manifest file\n * @docLink packages/core/concepts#scan-directory\n */\nexport function scanDirectory(root: string, repoName: string): CatalogEntry[] {\n  const entries = new Map<string, CatalogEntry>();\n\n  function add(e: CatalogEntry): void {\n    const key = `${e.kind}:${e.name}`;\n    const existing = entries.get(key);\n    if (!existing) {\n      entries.set(key, e);\n      return;\n    }\n    // Among duplicates, alphabetically later source path wins\n    if (e.source > existing.source) entries.set(key, e);\n  }\n\n  for (const { path: filePath, name } of walkDir(root)) {\n    try {\n      if (name === \"SKILL.md\") add(fromSkillMd(filePath, repoName));\n      else if (name === \"AGENT.md\") add(fromAgentMd(filePath, repoName));\n      else if (name === \"agent.yaml\") add(fromAgentYaml(filePath, repoName));\n      else if (name === \"CONTRACT.md\") add(fromContractMd(filePath, repoName));\n      else if (name === \"MCP.md\") add(fromMcpServerMd(filePath, repoName));\n      else if (name === \"CONNECTOR.md\") add(fromConnectorMd(filePath, repoName));\n      else if (name === \"knowledge.yaml\") add(fromKnowledgeYaml(filePath, repoName));\n      else if (name.endsWith(\".prompt.md\")) add(fromPromptMd(filePath, repoName));\n      else if (name.endsWith(\".bundle.yaml\")) add(fromBundleYaml(filePath, repoName));\n      else if (name.endsWith(\".flow.yaml\") || name.endsWith(\".flow.json\"))\n        add(fromFlowYaml(filePath, repoName));\n    } catch {}\n  }\n\n  return [...entries.values()];\n}\n"]}