@sjcrh/proteinpaint-types 2.98.0 → 2.98.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/chunk-DFSJACIQ.js +3373 -0
- package/dist/{chunk-SRDMLS6D.js → chunk-GQVW2DPA.js} +35 -73
- package/dist/chunk-X36QKCNU.js +3544 -0
- package/dist/{chunk-WCMW6A75.js → chunk-Y4KYTIK6.js} +2 -2
- package/dist/correlationVolcano.js +11 -0
- package/dist/index.js +32 -24
- package/dist/termdb.boxplot.js +1 -1
- package/dist/termdb.topVariablyExpressedGenes.js +1 -1
- package/dist/termdb.violin.js +1 -1
- package/package.json +1 -1
- package/src/dataset.ts +42 -16
- package/src/index.ts +1 -0
- package/src/routes/correlationVolcano.ts +44 -0
- package/src/routes/termdb.boxplot.ts +10 -8
- package/src/routes/termdb.violin.ts +3 -6
- package/src/termdb.matrix.ts +14 -13
- package/dist/chunk-OAO3UWUX.js +0 -311
package/dist/chunk-OAO3UWUX.js
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import {
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__toESM,
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require_lib
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} from "./chunk-Z6B6IQIY.js";
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// dist/termdb.boxplot.ts
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var import_typia = __toESM(require_lib(), 1);
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// src/routes/termdb.boxplot.ts
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var boxplotPayload = {
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request: {
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typeId: "BoxPlotRequest"
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},
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response: {
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typeId: "BoxPlotResponse"
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},
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examples: [
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{
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request: {
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body: {
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tw: {
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term: { id: "subcohort", type: "categorical" },
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values: [{ key: "ABC", label: "ABC" }]
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},
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genome: "hg38-test",
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dslabel: "TermdbTest",
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orderByMedian: true
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}
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},
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response: {
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body: {
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absMin: 0,
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absMax: 100,
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plots: [
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{
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boxplot: {
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label: "ABC",
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w1: 0,
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w2: 100,
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p05: 0,
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p25: 25,
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p50: 50,
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p75: 75,
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p95: 100,
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iqr: 50,
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out: [101, 102, 106]
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},
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color: "blue",
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descrStats: [
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{ id: "total", label: "Total", value: 100 },
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{ id: "min", label: "Min", value: 0 },
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{ id: "p25", label: "25%", value: 25 },
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{ id: "median", label: "Median", value: 50 },
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{ id: "mean", label: "Mean", value: 50 },
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{ id: "p75", label: "75%", value: 75 },
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{ id: "max", label: "Max", value: 100 },
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{ id: "sd", label: "SD", value: 0 },
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{ id: "variance", label: "Variance", value: 0 },
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{ id: "iqr", label: "IQR", value: 50 }
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],
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key: "ABC"
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}
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],
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uncomputableValues: [{ label: "uncomputable-test", value: 1 }]
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}
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}
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}
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]
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};
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// dist/termdb.boxplot.ts
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var validBoxPlotRequest = (input) => {
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const errors = [];
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const __is = (input2) => {
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const $io0 = (input3) => "string" === typeof input3.genome && "string" === typeof input3.dslabel && "boolean" === typeof input3.orderByMedian && true && true && true;
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return "object" === typeof input2 && null !== input2 && $io0(input2);
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};
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if (false === __is(input)) {
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const $report = import_typia.createValidate.report(errors);
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((input2, _path, _exceptionable = true) => {
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const $vo0 = (input3, _path2, _exceptionable2 = true) => [true, "string" === typeof input3.genome || $report(_exceptionable2, {
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path: _path2 + ".genome",
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expected: "string",
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value: input3.genome
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}), "string" === typeof input3.dslabel || $report(_exceptionable2, {
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path: _path2 + ".dslabel",
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expected: "string",
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value: input3.dslabel
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}), "boolean" === typeof input3.orderByMedian || $report(_exceptionable2, {
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path: _path2 + ".orderByMedian",
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expected: "boolean",
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value: input3.orderByMedian
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}), true, true, true].every((flag) => flag);
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return ("object" === typeof input2 && null !== input2 || $report(true, {
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path: _path + "",
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expected: "BoxPlotRequest",
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value: input2
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})) && $vo0(input2, _path + "", true) || $report(true, {
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path: _path + "",
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expected: "BoxPlotRequest",
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value: input2
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});
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})(input, "$input", true);
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}
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const success = 0 === errors.length;
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return {
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success,
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errors,
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data: success ? input : void 0
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};
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};
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var validBoxPlotResponse = (input) => {
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const errors = [];
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const __is = (input2) => {
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const $io0 = (input3) => (void 0 === input3.absMin || "number" === typeof input3.absMin) && (void 0 === input3.absMax || "number" === typeof input3.absMax) && (Array.isArray(input3.plots) && input3.plots.every((elem) => "object" === typeof elem && null !== elem && $io1(elem))) && (null === input3.uncomputableValues || Array.isArray(input3.uncomputableValues) && input3.uncomputableValues.every((elem) => "object" === typeof elem && null !== elem && $io5(elem)));
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const $io1 = (input3) => "object" === typeof input3.boxplot && null !== input3.boxplot && $io2(input3.boxplot) && (void 0 === input3.color || "string" === typeof input3.color) && (Array.isArray(input3.descrStats) && input3.descrStats.every((elem) => "object" === typeof elem && null !== elem && $io4(elem))) && (void 0 === input3.isHidden || "boolean" === typeof input3.isHidden) && "string" === typeof input3.key && true && (void 0 === input3.seriesId || "string" === typeof input3.seriesId);
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const $io2 = (input3) => (void 0 === input3.w1 || "number" === typeof input3.w1) && (void 0 === input3.w2 || "number" === typeof input3.w2) && "number" === typeof input3.p05 && "number" === typeof input3.p25 && "number" === typeof input3.p50 && "number" === typeof input3.p75 && "number" === typeof input3.p95 && "number" === typeof input3.iqr && (Array.isArray(input3.out) && input3.out.every((elem) => "object" === typeof elem && null !== elem && $io3(elem))) && "string" === typeof input3.label;
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const $io3 = (input3) => "number" === typeof input3.value;
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const $io4 = (input3) => "string" === typeof input3.id && "string" === typeof input3.label && "number" === typeof input3.value;
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const $io5 = (input3) => "string" === typeof input3.label && "number" === typeof input3.value;
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return "object" === typeof input2 && null !== input2 && $io0(input2);
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};
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if (false === __is(input)) {
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const $report = import_typia.createValidate.report(errors);
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((input2, _path, _exceptionable = true) => {
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const $vo0 = (input3, _path2, _exceptionable2 = true) => [void 0 === input3.absMin || "number" === typeof input3.absMin || $report(_exceptionable2, {
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path: _path2 + ".absMin",
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expected: "(number | undefined)",
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value: input3.absMin
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}), void 0 === input3.absMax || "number" === typeof input3.absMax || $report(_exceptionable2, {
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path: _path2 + ".absMax",
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expected: "(number | undefined)",
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value: input3.absMax
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}), (Array.isArray(input3.plots) || $report(_exceptionable2, {
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path: _path2 + ".plots",
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expected: "Array<BoxPlotEntry>",
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value: input3.plots
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})) && input3.plots.map((elem, _index1) => ("object" === typeof elem && null !== elem || $report(_exceptionable2, {
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path: _path2 + ".plots[" + _index1 + "]",
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expected: "BoxPlotEntry",
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value: elem
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})) && $vo1(elem, _path2 + ".plots[" + _index1 + "]", _exceptionable2) || $report(_exceptionable2, {
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path: _path2 + ".plots[" + _index1 + "]",
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expected: "BoxPlotEntry",
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value: elem
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})).every((flag) => flag) || $report(_exceptionable2, {
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path: _path2 + ".plots",
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expected: "Array<BoxPlotEntry>",
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value: input3.plots
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}), null === input3.uncomputableValues || (Array.isArray(input3.uncomputableValues) || $report(_exceptionable2, {
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path: _path2 + ".uncomputableValues",
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expected: "(Array<__type>.o1 | null)",
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value: input3.uncomputableValues
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})) && input3.uncomputableValues.map((elem, _index2) => ("object" === typeof elem && null !== elem || $report(_exceptionable2, {
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path: _path2 + ".uncomputableValues[" + _index2 + "]",
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expected: "__type.o1",
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value: elem
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})) && $vo5(elem, _path2 + ".uncomputableValues[" + _index2 + "]", _exceptionable2) || $report(_exceptionable2, {
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path: _path2 + ".uncomputableValues[" + _index2 + "]",
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expected: "__type.o1",
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value: elem
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})).every((flag) => flag) || $report(_exceptionable2, {
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path: _path2 + ".uncomputableValues",
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expected: "(Array<__type>.o1 | null)",
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value: input3.uncomputableValues
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})].every((flag) => flag);
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const $vo1 = (input3, _path2, _exceptionable2 = true) => [("object" === typeof input3.boxplot && null !== input3.boxplot || $report(_exceptionable2, {
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path: _path2 + ".boxplot",
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expected: "BoxPlotData & { label: string; }",
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value: input3.boxplot
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})) && $vo2(input3.boxplot, _path2 + ".boxplot", _exceptionable2) || $report(_exceptionable2, {
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path: _path2 + ".boxplot",
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expected: "BoxPlotData & { label: string; }",
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value: input3.boxplot
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}), void 0 === input3.color || "string" === typeof input3.color || $report(_exceptionable2, {
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path: _path2 + ".color",
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expected: "(string | undefined)",
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value: input3.color
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}), (Array.isArray(input3.descrStats) || $report(_exceptionable2, {
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path: _path2 + ".descrStats",
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expected: "Array<BoxPlotDescrStatsEntry>",
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value: input3.descrStats
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})) && input3.descrStats.map((elem, _index3) => ("object" === typeof elem && null !== elem || $report(_exceptionable2, {
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path: _path2 + ".descrStats[" + _index3 + "]",
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expected: "BoxPlotDescrStatsEntry",
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value: elem
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})) && $vo4(elem, _path2 + ".descrStats[" + _index3 + "]", _exceptionable2) || $report(_exceptionable2, {
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path: _path2 + ".descrStats[" + _index3 + "]",
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expected: "BoxPlotDescrStatsEntry",
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value: elem
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})).every((flag) => flag) || $report(_exceptionable2, {
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path: _path2 + ".descrStats",
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value: input3.descrStats
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}), void 0 === input3.isHidden || "boolean" === typeof input3.isHidden || $report(_exceptionable2, {
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path: _path2 + ".isHidden",
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expected: "(boolean | undefined)",
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value: input3.isHidden
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}), "string" === typeof input3.key || $report(_exceptionable2, {
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path: _path2 + ".key",
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expected: "string",
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value: input3.key
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}), true, void 0 === input3.seriesId || "string" === typeof input3.seriesId || $report(_exceptionable2, {
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path: _path2 + ".seriesId",
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expected: "(string | undefined)",
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value: input3.seriesId
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})].every((flag) => flag);
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const $vo2 = (input3, _path2, _exceptionable2 = true) => [void 0 === input3.w1 || "number" === typeof input3.w1 || $report(_exceptionable2, {
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path: _path2 + ".w1",
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expected: "(number | undefined)",
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value: input3.w1
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}), void 0 === input3.w2 || "number" === typeof input3.w2 || $report(_exceptionable2, {
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path: _path2 + ".w2",
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expected: "(number | undefined)",
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value: input3.w2
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}), "number" === typeof input3.p05 || $report(_exceptionable2, {
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path: _path2 + ".p05",
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expected: "number",
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value: input3.p05
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}), "number" === typeof input3.p25 || $report(_exceptionable2, {
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path: _path2 + ".p25",
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expected: "number",
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value: input3.p25
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}), "number" === typeof input3.p50 || $report(_exceptionable2, {
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path: _path2 + ".p50",
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expected: "number",
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value: input3.p50
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}), "number" === typeof input3.p75 || $report(_exceptionable2, {
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path: _path2 + ".p75",
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value: input3.p75
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}), "number" === typeof input3.p95 || $report(_exceptionable2, {
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path: _path2 + ".p95",
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expected: "number",
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value: input3.p95
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}), "number" === typeof input3.iqr || $report(_exceptionable2, {
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path: _path2 + ".iqr",
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expected: "number",
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value: input3.iqr
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}), (Array.isArray(input3.out) || $report(_exceptionable2, {
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path: _path2 + ".out",
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expected: "Array<__type>",
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value: input3.out
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})) && input3.out.map((elem, _index4) => ("object" === typeof elem && null !== elem || $report(_exceptionable2, {
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path: _path2 + ".out[" + _index4 + "]",
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expected: "__type",
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value: elem
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})) && $vo3(elem, _path2 + ".out[" + _index4 + "]", _exceptionable2) || $report(_exceptionable2, {
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path: _path2 + ".out[" + _index4 + "]",
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value: elem
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})).every((flag) => flag) || $report(_exceptionable2, {
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path: _path2 + ".out",
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expected: "Array<__type>",
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value: input3.out
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}), "string" === typeof input3.label || $report(_exceptionable2, {
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path: _path2 + ".label",
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expected: "string",
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value: input3.label
|
|
260
|
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})].every((flag) => flag);
|
|
261
|
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const $vo3 = (input3, _path2, _exceptionable2 = true) => ["number" === typeof input3.value || $report(_exceptionable2, {
|
|
262
|
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path: _path2 + ".value",
|
|
263
|
-
expected: "number",
|
|
264
|
-
value: input3.value
|
|
265
|
-
})].every((flag) => flag);
|
|
266
|
-
const $vo4 = (input3, _path2, _exceptionable2 = true) => ["string" === typeof input3.id || $report(_exceptionable2, {
|
|
267
|
-
path: _path2 + ".id",
|
|
268
|
-
expected: "string",
|
|
269
|
-
value: input3.id
|
|
270
|
-
}), "string" === typeof input3.label || $report(_exceptionable2, {
|
|
271
|
-
path: _path2 + ".label",
|
|
272
|
-
expected: "string",
|
|
273
|
-
value: input3.label
|
|
274
|
-
}), "number" === typeof input3.value || $report(_exceptionable2, {
|
|
275
|
-
path: _path2 + ".value",
|
|
276
|
-
expected: "number",
|
|
277
|
-
value: input3.value
|
|
278
|
-
})].every((flag) => flag);
|
|
279
|
-
const $vo5 = (input3, _path2, _exceptionable2 = true) => ["string" === typeof input3.label || $report(_exceptionable2, {
|
|
280
|
-
path: _path2 + ".label",
|
|
281
|
-
expected: "string",
|
|
282
|
-
value: input3.label
|
|
283
|
-
}), "number" === typeof input3.value || $report(_exceptionable2, {
|
|
284
|
-
path: _path2 + ".value",
|
|
285
|
-
expected: "number",
|
|
286
|
-
value: input3.value
|
|
287
|
-
})].every((flag) => flag);
|
|
288
|
-
return ("object" === typeof input2 && null !== input2 || $report(true, {
|
|
289
|
-
path: _path + "",
|
|
290
|
-
expected: "BoxPlotResponse",
|
|
291
|
-
value: input2
|
|
292
|
-
})) && $vo0(input2, _path + "", true) || $report(true, {
|
|
293
|
-
path: _path + "",
|
|
294
|
-
expected: "BoxPlotResponse",
|
|
295
|
-
value: input2
|
|
296
|
-
});
|
|
297
|
-
})(input, "$input", true);
|
|
298
|
-
}
|
|
299
|
-
const success = 0 === errors.length;
|
|
300
|
-
return {
|
|
301
|
-
success,
|
|
302
|
-
errors,
|
|
303
|
-
data: success ? input : void 0
|
|
304
|
-
};
|
|
305
|
-
};
|
|
306
|
-
|
|
307
|
-
export {
|
|
308
|
-
boxplotPayload,
|
|
309
|
-
validBoxPlotRequest,
|
|
310
|
-
validBoxPlotResponse
|
|
311
|
-
};
|