@sjcrh/proteinpaint-types 2.85.0 → 2.87.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/README.md +22 -0
- package/dist/brainImaging.js +11 -0
- package/dist/brainImagingSamples.js +11 -0
- package/dist/burden.js +11 -0
- package/dist/chunk-37ZPCVP5.js +111 -0
- package/dist/chunk-5GG2FNAY.js +62 -0
- package/dist/chunk-5JWTIWVB.js +222 -0
- package/dist/chunk-5RZYB4M4.js +171 -0
- package/dist/chunk-6EFB6ZMB.js +62 -0
- package/dist/chunk-6LFMFM2C.js +122 -0
- package/dist/chunk-7PMGKVWQ.js +62 -0
- package/dist/chunk-7Z3IHB43.js +152 -0
- package/dist/chunk-B3D26X6X.js +337 -0
- package/dist/chunk-BY2JABTF.js +256 -0
- package/dist/chunk-CETMA2FU.js +144 -0
- package/dist/chunk-DCN75URO.js +1740 -0
- package/dist/chunk-DIDZMC3G.js +96 -0
- package/dist/chunk-DKSPASWZ.js +4058 -0
- package/dist/chunk-EWRK4PKZ.js +62 -0
- package/dist/chunk-FDTUTGQG.js +288 -0
- package/dist/chunk-FZ6QOTGM.js +205 -0
- package/dist/chunk-GU7LIGHN.js +174 -0
- package/dist/chunk-IL33L6MY.js +126 -0
- package/dist/chunk-INDBFC54.js +1538 -0
- package/dist/chunk-IT7IGDC4.js +1697 -0
- package/dist/chunk-IWG5IPXG.js +3409 -0
- package/dist/chunk-JEQ3TBVQ.js +1472 -0
- package/dist/chunk-JPW6LFDQ.js +1507 -0
- package/dist/chunk-K2KQTFQI.js +113 -0
- package/dist/chunk-M33KP65Z.js +3347 -0
- package/dist/chunk-MUJUKENL.js +62 -0
- package/dist/chunk-N45Z3JCY.js +62 -0
- package/dist/chunk-OMHEDUNA.js +62 -0
- package/dist/chunk-OY3EKV7F.js +130 -0
- package/dist/chunk-Q56YNQFK.js +3417 -0
- package/dist/chunk-QDIIM52V.js +165 -0
- package/dist/chunk-QX7QLUKY.js +228 -0
- package/dist/chunk-RLFGMVJZ.js +234 -0
- package/dist/chunk-SDOWCOGK.js +96 -0
- package/dist/chunk-UCG25D2C.js +109 -0
- package/dist/chunk-UIU3IQH4.js +62 -0
- package/dist/chunk-W3F2RMPU.js +3494 -0
- package/dist/chunk-W3QYIXXF.js +273 -0
- package/dist/chunk-XGAOGA3F.js +159 -0
- package/dist/chunk-XJCQEOPB.js +61 -0
- package/dist/chunk-XLBSZOMF.js +117 -0
- package/dist/chunk-XQQ5G6N6.js +109 -0
- package/dist/chunk-Z6B6IQIY.js +1785 -0
- package/dist/dataset.js +11 -0
- package/dist/dsdata.js +11 -0
- package/dist/dzimages.js +11 -0
- package/dist/gdc.maf.js +11 -0
- package/dist/gdc.mafBuild.js +11 -0
- package/dist/gdc.topMutatedGenes.js +11 -0
- package/dist/genelookup.js +11 -0
- package/dist/genesetEnrichment.js +11 -0
- package/dist/genesetOverrepresentation.js +11 -0
- package/dist/healthcheck.js +11 -0
- package/dist/hicdata.js +11 -0
- package/dist/hicgenome.js +11 -0
- package/dist/hicstat.js +11 -0
- package/dist/index.js +347 -0
- package/dist/isoformlst.js +11 -0
- package/dist/ntseq.js +11 -0
- package/dist/pdomain.js +11 -0
- package/dist/samplewsimages.js +11 -0
- package/dist/snp.js +11 -0
- package/dist/termdb.DE.js +11 -0
- package/dist/termdb.boxplot.js +11 -0
- package/dist/termdb.categories.js +11 -0
- package/dist/termdb.cluster.js +11 -0
- package/dist/termdb.cohort.summary.js +11 -0
- package/dist/termdb.cohorts.js +11 -0
- package/dist/termdb.descrstats.js +11 -0
- package/dist/termdb.numericcategories.js +11 -0
- package/dist/termdb.percentile.js +11 -0
- package/dist/termdb.rootterm.js +11 -0
- package/dist/termdb.sampleImages.js +11 -0
- package/dist/termdb.singleSampleMutation.js +11 -0
- package/dist/termdb.singlecellDEgenes.js +11 -0
- package/dist/termdb.singlecellData.js +11 -0
- package/dist/termdb.singlecellSamples.js +11 -0
- package/dist/termdb.termchildren.js +11 -0
- package/dist/termdb.termsbyids.js +11 -0
- package/dist/termdb.topTermsByType.js +11 -0
- package/dist/termdb.topVariablyExpressedGenes.js +11 -0
- package/dist/termdb.violin.js +11 -0
- package/dist/tileserver.js +11 -0
- package/dist/wsimages.js +11 -0
- package/package.json +19 -14
- package/src/Mclass.ts +8 -0
- package/src/dataset.ts +1578 -0
- package/src/docs.json +16417 -0
- package/src/fileOrUrl.ts +15 -0
- package/src/filter.ts +125 -0
- package/src/genome.ts +123 -0
- package/src/index.ts +67 -0
- package/src/routes/brainImaging.ts +47 -0
- package/src/routes/brainImagingSamples.ts +25 -0
- package/src/routes/burden.ts +111 -0
- package/src/routes/dataset.ts +14 -0
- package/src/routes/dsdata.ts +14 -0
- package/src/routes/dzimages.ts +25 -0
- package/src/routes/errorResponse.ts +6 -0
- package/src/routes/filter.gdc.ts +15 -0
- package/src/routes/gdc.maf.ts +52 -0
- package/src/routes/gdc.mafBuild.ts +20 -0
- package/src/routes/gdc.topMutatedGenes.ts +37 -0
- package/src/routes/genelookup.ts +22 -0
- package/src/routes/genesetEnrichment.ts +60 -0
- package/src/routes/genesetOverrepresentation.ts +48 -0
- package/src/routes/healthcheck.ts +79 -0
- package/src/routes/hicdata.ts +48 -0
- package/src/routes/hicgenome.ts +50 -0
- package/src/routes/hicstat.ts +57 -0
- package/src/routes/isoformlst.ts +14 -0
- package/src/routes/ntseq.ts +14 -0
- package/src/routes/pdomain.ts +14 -0
- package/src/routes/routeApi.ts +41 -0
- package/src/routes/samplewsimages.ts +27 -0
- package/src/routes/snp.ts +13 -0
- package/src/routes/termdb.DE.ts +57 -0
- package/src/routes/termdb.boxplot.ts +78 -0
- package/src/routes/termdb.categories.ts +73 -0
- package/src/routes/termdb.cluster.ts +103 -0
- package/src/routes/termdb.cohort.summary.ts +14 -0
- package/src/routes/termdb.cohorts.ts +14 -0
- package/src/routes/termdb.descrstats.ts +78 -0
- package/src/routes/termdb.numericcategories.ts +32 -0
- package/src/routes/termdb.percentile.ts +65 -0
- package/src/routes/termdb.rootterm.ts +49 -0
- package/src/routes/termdb.sampleImages.ts +26 -0
- package/src/routes/termdb.singleSampleMutation.ts +29 -0
- package/src/routes/termdb.singlecellDEgenes.ts +41 -0
- package/src/routes/termdb.singlecellData.ts +69 -0
- package/src/routes/termdb.singlecellSamples.ts +46 -0
- package/src/routes/termdb.termchildren.ts +49 -0
- package/src/routes/termdb.termsbyids.ts +26 -0
- package/src/routes/termdb.topTermsByType.ts +32 -0
- package/src/routes/termdb.topVariablyExpressedGenes.ts +56 -0
- package/src/routes/termdb.violin.ts +122 -0
- package/src/routes/tileserver.ts +14 -0
- package/src/routes/wsimages.ts +24 -0
- package/src/terms/categorical.ts +106 -0
- package/src/terms/condition.ts +55 -0
- package/src/terms/geneExpression.ts +32 -0
- package/src/terms/geneVariant.ts +51 -0
- package/src/terms/metaboliteIntensity.ts +31 -0
- package/src/terms/numeric.ts +253 -0
- package/src/terms/q.ts +38 -0
- package/src/terms/samplelst.ts +41 -0
- package/src/terms/singleCellCellType.ts +22 -0
- package/src/terms/singleCellGeneExpression.ts +28 -0
- package/src/terms/snp.ts +28 -0
- package/src/terms/snps.ts +110 -0
- package/src/terms/term.ts +184 -0
- package/src/terms/tw.ts +38 -0
- package/src/terms/updated-types.ts +9 -0
- package/src/termsetting.ts +197 -0
- package/src/test/numeric.type.spec.ts +275 -0
- package/src/vocab.ts +37 -0
- package/dist/routes.ts +0 -28847
- package/src/Mclass.js +0 -0
- package/src/checkers/routes.js +0 -167
- package/src/dataset.js +0 -0
- package/src/fileOrUrl.js +0 -0
- package/src/filter.js +0 -0
- package/src/genome.js +0 -0
- package/src/index.js +0 -66
- package/src/routes/brainImaging.js +0 -11
- package/src/routes/brainImagingSamples.js +0 -11
- package/src/routes/burden.js +0 -44
- package/src/routes/dataset.js +0 -12
- package/src/routes/dsdata.js +0 -12
- package/src/routes/dzimages.js +0 -12
- package/src/routes/errorResponse.js +0 -0
- package/src/routes/filter.gdc.js +0 -0
- package/src/routes/gdc.maf.js +0 -17
- package/src/routes/gdc.mafBuild.js +0 -12
- package/src/routes/gdc.topMutatedGenes.js +0 -12
- package/src/routes/genelookup.js +0 -12
- package/src/routes/genesetEnrichment.js +0 -12
- package/src/routes/genesetOverrepresentation.js +0 -12
- package/src/routes/healthcheck.js +0 -23
- package/src/routes/hicdata.js +0 -12
- package/src/routes/hicgenome.js +0 -29
- package/src/routes/hicstat.js +0 -12
- package/src/routes/isoformlst.js +0 -12
- package/src/routes/ntseq.js +0 -12
- package/src/routes/pdomain.js +0 -12
- package/src/routes/routeApi.js +0 -0
- package/src/routes/samplewsimages.js +0 -12
- package/src/routes/snp.js +0 -11
- package/src/routes/termdb.DE.js +0 -13
- package/src/routes/termdb.boxplot.js +0 -12
- package/src/routes/termdb.categories.js +0 -48
- package/src/routes/termdb.cluster.js +0 -12
- package/src/routes/termdb.cohort.summary.js +0 -12
- package/src/routes/termdb.cohorts.js +0 -12
- package/src/routes/termdb.descrstats.js +0 -48
- package/src/routes/termdb.numericcategories.js +0 -12
- package/src/routes/termdb.percentile.js +0 -49
- package/src/routes/termdb.rootterm.js +0 -27
- package/src/routes/termdb.sampleImages.js +0 -12
- package/src/routes/termdb.singleSampleMutation.js +0 -12
- package/src/routes/termdb.singlecellDEgenes.js +0 -12
- package/src/routes/termdb.singlecellData.js +0 -12
- package/src/routes/termdb.singlecellSamples.js +0 -12
- package/src/routes/termdb.termchildren.js +0 -28
- package/src/routes/termdb.termsbyids.js +0 -12
- package/src/routes/termdb.topTermsByType.js +0 -12
- package/src/routes/termdb.topVariablyExpressedGenes.js +0 -12
- package/src/routes/termdb.violin.js +0 -49
- package/src/routes/tileserver.js +0 -12
- package/src/routes/wsimages.js +0 -12
- package/src/terms/categorical.js +0 -0
- package/src/terms/condition.js +0 -0
- package/src/terms/geneExpression.js +0 -0
- package/src/terms/geneVariant.js +0 -0
- package/src/terms/metaboliteIntensity.js +0 -0
- package/src/terms/numeric.js +0 -0
- package/src/terms/q.js +0 -0
- package/src/terms/samplelst.js +0 -0
- package/src/terms/singleCellCellType.js +0 -0
- package/src/terms/singleCellGeneExpression.js +0 -0
- package/src/terms/snp.js +0 -0
- package/src/terms/snps.js +0 -0
- package/src/terms/term.js +0 -0
- package/src/terms/tw.js +0 -0
- package/src/terms/updated-types.js +0 -0
- package/src/termsetting.js +0 -0
- package/src/test/numeric.type.spec.js +0 -117
- package/src/vocab.js +0 -0
package/README.md
CHANGED
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@@ -10,6 +10,28 @@ Put type definitions that are used in client and server code in this workspace.
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Do NOT put here type definitions that are specific to one workspace,
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those should be saved in the applicable workspace.
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## Develop
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IMPORTANT: When changing source code that are used to generate runtime
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checker code, run `npm run generate` after saving changes. This package
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script will call `typia` to generate runtime code from typescript markup.
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If there are lots of iterations in editing type definitions that could
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affect run time code generation, you may call `npm run dev` which will
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watch changed `src` files and trigger a call to `typia` to regenerate `dist`
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runtime code.
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Consumer code can use type definitions from `@sjcrh/proteinpaint-types`,
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which maps to `src/index.ts`.
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Consumer code may also use runtime code from `@sjcrh/proteinpaint-types/checkers`,
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which maps to
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- `dist/index.js` for server code in nodejs env
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- `[public_dir]/dist/*.js` for client code in browser environment, requires symlinking
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from `@sjcrh/proteinpaint-types/dist` to somewhere under `public` dir.
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Note that in dev environment, `tsx` and `esbuild` are expected to directly transform
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`dist/*.ts` files for server and browser usage, respectively.
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## Test
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```sh
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import {
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brainImagingSamplesPayload,
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validBrainImagingSamplesRequest,
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validBrainImagingSamplesResponse
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} from "./chunk-OY3EKV7F.js";
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import "./chunk-Z6B6IQIY.js";
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export {
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brainImagingSamplesPayload,
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validBrainImagingSamplesRequest,
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validBrainImagingSamplesResponse
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};
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package/dist/burden.js
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import {
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__toESM,
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require_lib
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} from "./chunk-Z6B6IQIY.js";
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// dist/termdb.sampleImages.ts
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var import_typia = __toESM(require_lib(), 1);
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// src/routes/termdb.sampleImages.ts
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var termdbSampleImagesPayload = {
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request: {
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typeId: "TermdbSampleImagesRequest"
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},
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response: {
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typeId: "TermdbSampleImagesResponse"
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}
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//examples: []
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};
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// dist/termdb.sampleImages.ts
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var validTermdbSampleImagesRequest = (input) => {
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const errors = [];
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const __is = (input2) => {
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return "object" === typeof input2 && null !== input2 && ("string" === typeof input2.genome && "string" === typeof input2.dslabel && "number" === typeof input2.sampleId);
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};
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if (false === __is(input)) {
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const $report = import_typia.createValidate.report(errors);
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((input2, _path, _exceptionable = true) => {
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const $vo0 = (input3, _path2, _exceptionable2 = true) => ["string" === typeof input3.genome || $report(_exceptionable2, {
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path: _path2 + ".genome",
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expected: "string",
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value: input3.genome
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}), "string" === typeof input3.dslabel || $report(_exceptionable2, {
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path: _path2 + ".dslabel",
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expected: "string",
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value: input3.dslabel
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}), "number" === typeof input3.sampleId || $report(_exceptionable2, {
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path: _path2 + ".sampleId",
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expected: "number",
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value: input3.sampleId
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})].every((flag) => flag);
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return ("object" === typeof input2 && null !== input2 || $report(true, {
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path: _path + "",
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expected: "TermdbSampleImagesRequest",
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value: input2
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})) && $vo0(input2, _path + "", true) || $report(true, {
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path: _path + "",
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expected: "TermdbSampleImagesRequest",
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value: input2
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});
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})(input, "$input", true);
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}
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const success = 0 === errors.length;
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return {
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success,
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errors,
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data: success ? input : void 0
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};
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};
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var validTermdbSampleImagesResponse = (input) => {
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const errors = [];
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const __is = (input2) => {
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const $io0 = (input3) => Array.isArray(input3.images) && input3.images.every((elem) => "object" === typeof elem && null !== elem && $io1(elem));
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const $io1 = (input3) => true;
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return "object" === typeof input2 && null !== input2 && $io0(input2);
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};
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if (false === __is(input)) {
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const $report = import_typia.createValidate.report(errors);
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((input2, _path, _exceptionable = true) => {
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const $vo0 = (input3, _path2, _exceptionable2 = true) => [(Array.isArray(input3.images) || $report(_exceptionable2, {
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path: _path2 + ".images",
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expected: "Array<Image>",
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value: input3.images
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})) && input3.images.map((elem, _index1) => ("object" === typeof elem && null !== elem || $report(_exceptionable2, {
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path: _path2 + ".images[" + _index1 + "]",
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expected: "Image",
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value: elem
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})) && $vo1(elem, _path2 + ".images[" + _index1 + "]", _exceptionable2) || $report(_exceptionable2, {
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path: _path2 + ".images[" + _index1 + "]",
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expected: "Image",
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value: elem
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})).every((flag) => flag) || $report(_exceptionable2, {
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path: _path2 + ".images",
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expected: "Array<Image>",
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value: input3.images
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})].every((flag) => flag);
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const $vo1 = (input3, _path2, _exceptionable2 = true) => [true].every((flag) => flag);
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return ("object" === typeof input2 && null !== input2 || $report(true, {
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path: _path + "",
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expected: "TermdbSampleImagesResponse",
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value: input2
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})) && $vo0(input2, _path + "", true) || $report(true, {
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path: _path + "",
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var import_typia = __toESM(require_lib(), 1);
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var validNtseqResponse = (input) => {
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export {
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validNtseqRequest,
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validNtseqResponse
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|
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};
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import {
|
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2
|
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__toESM,
|
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3
|
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require_lib
|
|
4
|
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} from "./chunk-Z6B6IQIY.js";
|
|
5
|
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|
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6
|
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// dist/hicdata.ts
|
|
7
|
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var import_typia = __toESM(require_lib(), 1);
|
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|
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|
|
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|
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// src/routes/hicdata.ts
|
|
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|
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var hicdataPayload = {
|
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request: {
|
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|
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typeId: "HicdataRequest"
|
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response: {
|
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typeId: "HicdataResponse"
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}
|
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|
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|
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var validHicdataRequest = (input) => {
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|
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|
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const __is = (input2) => {
|
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|
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const $io0 = (input3) => "string" === typeof input3.file && (null !== input3.url && void 0 === input3.url) && ("observed" === input3.matrixType || "expected" === input3.matrixType || "oe" === input3.matrixType || "log(oe)" === input3.matrixType) && "number" === typeof input3.resolution && "string" === typeof input3.nmeth && "string" === typeof input3.pos1 && "string" === typeof input3.pos2 && (void 0 === input3.isfrag || "boolean" === typeof input3.isfrag) && (void 0 === input3.mincutoff || "number" === typeof input3.mincutoff);
|
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|
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const $io1 = (input3) => null !== input3.file && void 0 === input3.file && "string" === typeof input3.url && ("observed" === input3.matrixType || "expected" === input3.matrixType || "oe" === input3.matrixType || "log(oe)" === input3.matrixType) && "number" === typeof input3.resolution && "string" === typeof input3.nmeth && "string" === typeof input3.pos1 && "string" === typeof input3.pos2 && (void 0 === input3.isfrag || "boolean" === typeof input3.isfrag) && (void 0 === input3.mincutoff || "number" === typeof input3.mincutoff);
|
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|
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|
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|
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|
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return "object" === typeof input2 && null !== input2 && $iu0(input2);
|
|
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|
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};
|
|
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|
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if (false === __is(input)) {
|
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|
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const $report = import_typia.createValidate.report(errors);
|
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|
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((input2, _path, _exceptionable = true) => {
|
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|
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const $vo0 = (input3, _path2, _exceptionable2 = true) => ["string" === typeof input3.file || $report(_exceptionable2, {
|
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|
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path: _path2 + ".file",
|
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|
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expected: "string",
|
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|
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value: input3.file
|
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|
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}), (null !== input3.url || $report(_exceptionable2, {
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|
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path: _path2 + ".url",
|
|
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|
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expected: "undefined",
|
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|
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value: input3.url
|
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|
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})) && (void 0 === input3.url || $report(_exceptionable2, {
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|
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path: _path2 + ".url",
|
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|
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expected: "undefined",
|
|
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|
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value: input3.url
|
|
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|
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})), "observed" === input3.matrixType || "expected" === input3.matrixType || "oe" === input3.matrixType || "log(oe)" === input3.matrixType || $report(_exceptionable2, {
|
|
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|
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path: _path2 + ".matrixType",
|
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|
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expected: '("expected" | "log(oe)" | "observed" | "oe")',
|
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|
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value: input3.matrixType
|
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|
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}), "number" === typeof input3.resolution || $report(_exceptionable2, {
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|
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path: _path2 + ".resolution",
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|
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expected: "number",
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value: input3.resolution
|
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}), "string" === typeof input3.nmeth || $report(_exceptionable2, {
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path: _path2 + ".nmeth",
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expected: "string",
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value: input3.nmeth
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|
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}), "string" === typeof input3.pos1 || $report(_exceptionable2, {
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|
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path: _path2 + ".pos1",
|
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|
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expected: "string",
|
|
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|
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value: input3.pos1
|
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|
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}), "string" === typeof input3.pos2 || $report(_exceptionable2, {
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|
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path: _path2 + ".pos2",
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|
+
expected: "string",
|
|
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|
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value: input3.pos2
|
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|
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}), void 0 === input3.isfrag || "boolean" === typeof input3.isfrag || $report(_exceptionable2, {
|
|
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|
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path: _path2 + ".isfrag",
|
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|
+
expected: "(boolean | undefined)",
|
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|
+
value: input3.isfrag
|
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|
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}), void 0 === input3.mincutoff || "number" === typeof input3.mincutoff || $report(_exceptionable2, {
|
|
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|
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path: _path2 + ".mincutoff",
|
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|
+
expected: "(number | undefined)",
|
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|
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value: input3.mincutoff
|
|
78
|
+
})].every((flag) => flag);
|
|
79
|
+
const $vo1 = (input3, _path2, _exceptionable2 = true) => [(null !== input3.file || $report(_exceptionable2, {
|
|
80
|
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path: _path2 + ".file",
|
|
81
|
+
expected: "undefined",
|
|
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|
+
value: input3.file
|
|
83
|
+
})) && (void 0 === input3.file || $report(_exceptionable2, {
|
|
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|
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path: _path2 + ".file",
|
|
85
|
+
expected: "undefined",
|
|
86
|
+
value: input3.file
|
|
87
|
+
})), "string" === typeof input3.url || $report(_exceptionable2, {
|
|
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|
+
path: _path2 + ".url",
|
|
89
|
+
expected: "string",
|
|
90
|
+
value: input3.url
|
|
91
|
+
}), "observed" === input3.matrixType || "expected" === input3.matrixType || "oe" === input3.matrixType || "log(oe)" === input3.matrixType || $report(_exceptionable2, {
|
|
92
|
+
path: _path2 + ".matrixType",
|
|
93
|
+
expected: '("expected" | "log(oe)" | "observed" | "oe")',
|
|
94
|
+
value: input3.matrixType
|
|
95
|
+
}), "number" === typeof input3.resolution || $report(_exceptionable2, {
|
|
96
|
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path: _path2 + ".resolution",
|
|
97
|
+
expected: "number",
|
|
98
|
+
value: input3.resolution
|
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|
+
}), "string" === typeof input3.nmeth || $report(_exceptionable2, {
|
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|
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path: _path2 + ".nmeth",
|
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|
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expected: "string",
|
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|
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value: input3.nmeth
|
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|
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}), "string" === typeof input3.pos1 || $report(_exceptionable2, {
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|
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path: _path2 + ".pos1",
|
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105
|
+
expected: "string",
|
|
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|
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value: input3.pos1
|
|
107
|
+
}), "string" === typeof input3.pos2 || $report(_exceptionable2, {
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|
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path: _path2 + ".pos2",
|
|
109
|
+
expected: "string",
|
|
110
|
+
value: input3.pos2
|
|
111
|
+
}), void 0 === input3.isfrag || "boolean" === typeof input3.isfrag || $report(_exceptionable2, {
|
|
112
|
+
path: _path2 + ".isfrag",
|
|
113
|
+
expected: "(boolean | undefined)",
|
|
114
|
+
value: input3.isfrag
|
|
115
|
+
}), void 0 === input3.mincutoff || "number" === typeof input3.mincutoff || $report(_exceptionable2, {
|
|
116
|
+
path: _path2 + ".mincutoff",
|
|
117
|
+
expected: "(number | undefined)",
|
|
118
|
+
value: input3.mincutoff
|
|
119
|
+
})].every((flag) => flag);
|
|
120
|
+
const $vu0 = (input3, _path2, _exceptionable2 = true) => (() => {
|
|
121
|
+
if ("string" === typeof input3.url)
|
|
122
|
+
return $vo1(input3, _path2, _exceptionable2);
|
|
123
|
+
if ("string" === typeof input3.file)
|
|
124
|
+
return $vo0(input3, _path2, _exceptionable2);
|
|
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|
+
return $report(_exceptionable2, {
|
|
126
|
+
path: _path2,
|
|
127
|
+
expected: '(URLNotFile & { matrixType: "observed" | "expected" | "oe" | "log(oe)"; resolution: number; nmeth: string; } & { pos1: string; pos2: string; isfrag?: boolean | undefined; mincutoff?: number | undefined; } | FileNotURL & { matrixType: "observed" | "expected" | "oe" | "log(oe)"; resolution: number; nmeth: string; } & { pos1: string; pos2: string; isfrag?: boolean | undefined; mincutoff?: number | undefined; })',
|
|
128
|
+
value: input3
|
|
129
|
+
});
|
|
130
|
+
})();
|
|
131
|
+
return ("object" === typeof input2 && null !== input2 || $report(true, {
|
|
132
|
+
path: _path + "",
|
|
133
|
+
expected: '(FileNotURL & { matrixType: "observed" | "expected" | "oe" | "log(oe)"; resolution: number; nmeth: string; } & { pos1: string; pos2: string; isfrag?: boolean | undefined; mincutoff?: number | undefined; } | URLNotFile & { matrixType: "observed" | "expected" | "oe" | "log(oe)"; resolution: number; nmeth: string; } & { pos1: string; pos2: string; isfrag?: boolean | undefined; mincutoff?: number | undefined; })',
|
|
134
|
+
value: input2
|
|
135
|
+
})) && $vu0(input2, _path + "", true) || $report(true, {
|
|
136
|
+
path: _path + "",
|
|
137
|
+
expected: '(FileNotURL & { matrixType: "observed" | "expected" | "oe" | "log(oe)"; resolution: number; nmeth: string; } & { pos1: string; pos2: string; isfrag?: boolean | undefined; mincutoff?: number | undefined; } | URLNotFile & { matrixType: "observed" | "expected" | "oe" | "log(oe)"; resolution: number; nmeth: string; } & { pos1: string; pos2: string; isfrag?: boolean | undefined; mincutoff?: number | undefined; })',
|
|
138
|
+
value: input2
|
|
139
|
+
});
|
|
140
|
+
})(input, "$input", true);
|
|
141
|
+
}
|
|
142
|
+
const success = 0 === errors.length;
|
|
143
|
+
return {
|
|
144
|
+
success,
|
|
145
|
+
errors,
|
|
146
|
+
data: success ? input : void 0
|
|
147
|
+
};
|
|
148
|
+
};
|
|
149
|
+
var validHicdataResponse = (input) => {
|
|
150
|
+
const errors = [];
|
|
151
|
+
const __is = (input2) => {
|
|
152
|
+
const $io0 = (input3) => (void 0 === input3.error || "string" === typeof input3.error) && (Array.isArray(input3.items) && input3.items.every((elem) => Array.isArray(elem) && (elem.length === 3 && "number" === typeof elem[0] && "number" === typeof elem[1] && "number" === typeof elem[2])));
|
|
153
|
+
return "object" === typeof input2 && null !== input2 && $io0(input2);
|
|
154
|
+
};
|
|
155
|
+
if (false === __is(input)) {
|
|
156
|
+
const $report = import_typia.createValidate.report(errors);
|
|
157
|
+
((input2, _path, _exceptionable = true) => {
|
|
158
|
+
const $vo0 = (input3, _path2, _exceptionable2 = true) => [void 0 === input3.error || "string" === typeof input3.error || $report(_exceptionable2, {
|
|
159
|
+
path: _path2 + ".error",
|
|
160
|
+
expected: "(string | undefined)",
|
|
161
|
+
value: input3.error
|
|
162
|
+
}), (Array.isArray(input3.items) || $report(_exceptionable2, {
|
|
163
|
+
path: _path2 + ".items",
|
|
164
|
+
expected: "Array<XYZCoord>",
|
|
165
|
+
value: input3.items
|
|
166
|
+
})) && input3.items.map((elem, _index1) => (Array.isArray(elem) || $report(_exceptionable2, {
|
|
167
|
+
path: _path2 + ".items[" + _index1 + "]",
|
|
168
|
+
expected: "XYZCoord",
|
|
169
|
+
value: elem
|
|
170
|
+
})) && ((elem.length === 3 || $report(_exceptionable2, {
|
|
171
|
+
path: _path2 + ".items[" + _index1 + "]",
|
|
172
|
+
expected: "[number, number, number]",
|
|
173
|
+
value: elem
|
|
174
|
+
})) && [
|
|
175
|
+
"number" === typeof elem[0] || $report(_exceptionable2, {
|
|
176
|
+
path: _path2 + ".items[" + _index1 + "][0]",
|
|
177
|
+
expected: "number",
|
|
178
|
+
value: elem[0]
|
|
179
|
+
}),
|
|
180
|
+
"number" === typeof elem[1] || $report(_exceptionable2, {
|
|
181
|
+
path: _path2 + ".items[" + _index1 + "][1]",
|
|
182
|
+
expected: "number",
|
|
183
|
+
value: elem[1]
|
|
184
|
+
}),
|
|
185
|
+
"number" === typeof elem[2] || $report(_exceptionable2, {
|
|
186
|
+
path: _path2 + ".items[" + _index1 + "][2]",
|
|
187
|
+
expected: "number",
|
|
188
|
+
value: elem[2]
|
|
189
|
+
})
|
|
190
|
+
].every((flag) => flag)) || $report(_exceptionable2, {
|
|
191
|
+
path: _path2 + ".items[" + _index1 + "]",
|
|
192
|
+
expected: "XYZCoord",
|
|
193
|
+
value: elem
|
|
194
|
+
})).every((flag) => flag) || $report(_exceptionable2, {
|
|
195
|
+
path: _path2 + ".items",
|
|
196
|
+
expected: "Array<XYZCoord>",
|
|
197
|
+
value: input3.items
|
|
198
|
+
})].every((flag) => flag);
|
|
199
|
+
return ("object" === typeof input2 && null !== input2 || $report(true, {
|
|
200
|
+
path: _path + "",
|
|
201
|
+
expected: "HicdataResponse",
|
|
202
|
+
value: input2
|
|
203
|
+
})) && $vo0(input2, _path + "", true) || $report(true, {
|
|
204
|
+
path: _path + "",
|
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expected: "HicdataResponse",
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value: input2
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});
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})(input, "$input", true);
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}
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const success = 0 === errors.length;
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return {
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success,
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errors,
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data: success ? input : void 0
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};
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};
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export {
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hicdataPayload,
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validHicdataRequest,
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validHicdataResponse
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};
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@@ -0,0 +1,171 @@
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1
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import {
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2
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+
__toESM,
|
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3
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+
require_lib
|
|
4
|
+
} from "./chunk-Z6B6IQIY.js";
|
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5
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+
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6
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+
// dist/termdb.termchildren.ts
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7
|
+
var import_typia = __toESM(require_lib(), 1);
|
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8
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+
|
|
9
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+
// src/routes/termdb.termchildren.ts
|
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10
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+
var termChildrenPayload = {
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11
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request: {
|
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12
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+
typeId: "TermChildrenRequest"
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13
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+
},
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14
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response: {
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15
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+
typeId: "TermChildrenResponse"
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16
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},
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17
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+
examples: [
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{
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request: {
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body: {
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21
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genome: "hg38-test",
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22
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dslabel: "TermdbTest",
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23
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embedder: "localhost",
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24
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get_children: 1,
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25
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cohortValues: "ABC",
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26
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tid: "GO:0000001"
|
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}
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28
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+
},
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response: {
|
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30
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+
header: { status: 200 }
|
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31
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+
}
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32
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+
}
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33
|
+
]
|
|
34
|
+
};
|
|
35
|
+
|
|
36
|
+
// dist/termdb.termchildren.ts
|
|
37
|
+
var validTermChildrenRequest = (input) => {
|
|
38
|
+
const errors = [];
|
|
39
|
+
const __is = (input2) => {
|
|
40
|
+
return "object" === typeof input2 && null !== input2 && ("string" === typeof input2.genome && "string" === typeof input2.dslabel && "string" === typeof input2.embedder && "number" === typeof input2.get_children && "string" === typeof input2.tid);
|
|
41
|
+
};
|
|
42
|
+
if (false === __is(input)) {
|
|
43
|
+
const $report = import_typia.createValidate.report(errors);
|
|
44
|
+
((input2, _path, _exceptionable = true) => {
|
|
45
|
+
const $vo0 = (input3, _path2, _exceptionable2 = true) => ["string" === typeof input3.genome || $report(_exceptionable2, {
|
|
46
|
+
path: _path2 + ".genome",
|
|
47
|
+
expected: "string",
|
|
48
|
+
value: input3.genome
|
|
49
|
+
}), "string" === typeof input3.dslabel || $report(_exceptionable2, {
|
|
50
|
+
path: _path2 + ".dslabel",
|
|
51
|
+
expected: "string",
|
|
52
|
+
value: input3.dslabel
|
|
53
|
+
}), "string" === typeof input3.embedder || $report(_exceptionable2, {
|
|
54
|
+
path: _path2 + ".embedder",
|
|
55
|
+
expected: "string",
|
|
56
|
+
value: input3.embedder
|
|
57
|
+
}), "number" === typeof input3.get_children || $report(_exceptionable2, {
|
|
58
|
+
path: _path2 + ".get_children",
|
|
59
|
+
expected: "number",
|
|
60
|
+
value: input3.get_children
|
|
61
|
+
}), "string" === typeof input3.tid || $report(_exceptionable2, {
|
|
62
|
+
path: _path2 + ".tid",
|
|
63
|
+
expected: "string",
|
|
64
|
+
value: input3.tid
|
|
65
|
+
})].every((flag) => flag);
|
|
66
|
+
return ("object" === typeof input2 && null !== input2 || $report(true, {
|
|
67
|
+
path: _path + "",
|
|
68
|
+
expected: "TermChildrenRequest",
|
|
69
|
+
value: input2
|
|
70
|
+
})) && $vo0(input2, _path + "", true) || $report(true, {
|
|
71
|
+
path: _path + "",
|
|
72
|
+
expected: "TermChildrenRequest",
|
|
73
|
+
value: input2
|
|
74
|
+
});
|
|
75
|
+
})(input, "$input", true);
|
|
76
|
+
}
|
|
77
|
+
const success = 0 === errors.length;
|
|
78
|
+
return {
|
|
79
|
+
success,
|
|
80
|
+
errors,
|
|
81
|
+
data: success ? input : void 0
|
|
82
|
+
};
|
|
83
|
+
};
|
|
84
|
+
var validTermChildrenResponse = (input) => {
|
|
85
|
+
const errors = [];
|
|
86
|
+
const __is = (input2) => {
|
|
87
|
+
const $io0 = (input3) => Array.isArray(input3.lst) && input3.lst.every((elem) => "object" === typeof elem && null !== elem && $io1(elem));
|
|
88
|
+
const $io1 = (input3) => "string" === typeof input3.name && "string" === typeof input3.id && "boolean" === typeof input3.isleaf && (Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem));
|
|
89
|
+
return "object" === typeof input2 && null !== input2 && $io0(input2);
|
|
90
|
+
};
|
|
91
|
+
if (false === __is(input)) {
|
|
92
|
+
const $report = import_typia.createValidate.report(errors);
|
|
93
|
+
((input2, _path, _exceptionable = true) => {
|
|
94
|
+
const $vo0 = (input3, _path2, _exceptionable2 = true) => [(Array.isArray(input3.lst) || $report(_exceptionable2, {
|
|
95
|
+
path: _path2 + ".lst",
|
|
96
|
+
expected: "Array<Entries>",
|
|
97
|
+
value: input3.lst
|
|
98
|
+
})) && input3.lst.map((elem, _index1) => ("object" === typeof elem && null !== elem || $report(_exceptionable2, {
|
|
99
|
+
path: _path2 + ".lst[" + _index1 + "]",
|
|
100
|
+
expected: "Entries",
|
|
101
|
+
value: elem
|
|
102
|
+
})) && $vo1(elem, _path2 + ".lst[" + _index1 + "]", _exceptionable2) || $report(_exceptionable2, {
|
|
103
|
+
path: _path2 + ".lst[" + _index1 + "]",
|
|
104
|
+
expected: "Entries",
|
|
105
|
+
value: elem
|
|
106
|
+
})).every((flag) => flag) || $report(_exceptionable2, {
|
|
107
|
+
path: _path2 + ".lst",
|
|
108
|
+
expected: "Array<Entries>",
|
|
109
|
+
value: input3.lst
|
|
110
|
+
})].every((flag) => flag);
|
|
111
|
+
const $vo1 = (input3, _path2, _exceptionable2 = true) => ["string" === typeof input3.name || $report(_exceptionable2, {
|
|
112
|
+
path: _path2 + ".name",
|
|
113
|
+
expected: "string",
|
|
114
|
+
value: input3.name
|
|
115
|
+
}), "string" === typeof input3.id || $report(_exceptionable2, {
|
|
116
|
+
path: _path2 + ".id",
|
|
117
|
+
expected: "string",
|
|
118
|
+
value: input3.id
|
|
119
|
+
}), "boolean" === typeof input3.isleaf || $report(_exceptionable2, {
|
|
120
|
+
path: _path2 + ".isleaf",
|
|
121
|
+
expected: "boolean",
|
|
122
|
+
value: input3.isleaf
|
|
123
|
+
}), (Array.isArray(input3.included_types) || $report(_exceptionable2, {
|
|
124
|
+
path: _path2 + ".included_types",
|
|
125
|
+
expected: "Array<string>",
|
|
126
|
+
value: input3.included_types
|
|
127
|
+
})) && input3.included_types.map((elem, _index2) => "string" === typeof elem || $report(_exceptionable2, {
|
|
128
|
+
path: _path2 + ".included_types[" + _index2 + "]",
|
|
129
|
+
expected: "string",
|
|
130
|
+
value: elem
|
|
131
|
+
})).every((flag) => flag) || $report(_exceptionable2, {
|
|
132
|
+
path: _path2 + ".included_types",
|
|
133
|
+
expected: "Array<string>",
|
|
134
|
+
value: input3.included_types
|
|
135
|
+
}), (Array.isArray(input3.child_types) || $report(_exceptionable2, {
|
|
136
|
+
path: _path2 + ".child_types",
|
|
137
|
+
expected: "Array<string>",
|
|
138
|
+
value: input3.child_types
|
|
139
|
+
})) && input3.child_types.map((elem, _index3) => "string" === typeof elem || $report(_exceptionable2, {
|
|
140
|
+
path: _path2 + ".child_types[" + _index3 + "]",
|
|
141
|
+
expected: "string",
|
|
142
|
+
value: elem
|
|
143
|
+
})).every((flag) => flag) || $report(_exceptionable2, {
|
|
144
|
+
path: _path2 + ".child_types",
|
|
145
|
+
expected: "Array<string>",
|
|
146
|
+
value: input3.child_types
|
|
147
|
+
})].every((flag) => flag);
|
|
148
|
+
return ("object" === typeof input2 && null !== input2 || $report(true, {
|
|
149
|
+
path: _path + "",
|
|
150
|
+
expected: "TermChildrenResponse",
|
|
151
|
+
value: input2
|
|
152
|
+
})) && $vo0(input2, _path + "", true) || $report(true, {
|
|
153
|
+
path: _path + "",
|
|
154
|
+
expected: "TermChildrenResponse",
|
|
155
|
+
value: input2
|
|
156
|
+
});
|
|
157
|
+
})(input, "$input", true);
|
|
158
|
+
}
|
|
159
|
+
const success = 0 === errors.length;
|
|
160
|
+
return {
|
|
161
|
+
success,
|
|
162
|
+
errors,
|
|
163
|
+
data: success ? input : void 0
|
|
164
|
+
};
|
|
165
|
+
};
|
|
166
|
+
|
|
167
|
+
export {
|
|
168
|
+
termChildrenPayload,
|
|
169
|
+
validTermChildrenRequest,
|
|
170
|
+
validTermChildrenResponse
|
|
171
|
+
};
|