@sjcrh/proteinpaint-types 2.189.0 → 2.190.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (245) hide show
  1. package/README.md +8 -20
  2. package/dist/index.js +422 -553
  3. package/dist/index.js.map +7 -0
  4. package/package.json +13 -25
  5. package/dist/aiProjectAdmin.js +0 -11
  6. package/dist/aiProjectSelectedWSImages.js +0 -11
  7. package/dist/aiProjectTrainModel.js +0 -11
  8. package/dist/alphaGenome.js +0 -11
  9. package/dist/alphaGenomeTypes.js +0 -11
  10. package/dist/brainImaging.js +0 -11
  11. package/dist/brainImagingSamples.js +0 -11
  12. package/dist/burden.js +0 -11
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  83. package/dist/clearwsisession.js +0 -78
  84. package/dist/clearwsisessions.js +0 -13
  85. package/dist/correlationVolcano.js +0 -11
  86. package/dist/dataset.js +0 -11
  87. package/dist/deleteWSITileSelection.js +0 -11
  88. package/dist/dsdata.js +0 -11
  89. package/dist/dzimages.js +0 -11
  90. package/dist/gdc.grin2.js +0 -17
  91. package/dist/gdc.maf.js +0 -11
  92. package/dist/gdc.mafBuild.js +0 -11
  93. package/dist/genelookup.js +0 -11
  94. package/dist/genesetEnrichment.js +0 -11
  95. package/dist/genesetOverrepresentation.js +0 -11
  96. package/dist/grin2.js +0 -11
  97. package/dist/healthcheck.js +0 -11
  98. package/dist/hicdata.js +0 -11
  99. package/dist/hicgenome.js +0 -11
  100. package/dist/hicstat.js +0 -11
  101. package/dist/img.js +0 -11
  102. package/dist/isoformlst.js +0 -11
  103. package/dist/ntseq.js +0 -11
  104. package/dist/pdomain.js +0 -11
  105. package/dist/samplewsimages.js +0 -13
  106. package/dist/saveWSIAnnotation.js +0 -11
  107. package/dist/snp.js +0 -11
  108. package/dist/termdb.DE.js +0 -11
  109. package/dist/termdb.categories.js +0 -11
  110. package/dist/termdb.chat.js +0 -3631
  111. package/dist/termdb.chat2.js +0 -15
  112. package/dist/termdb.cluster.js +0 -11
  113. package/dist/termdb.cohort.summary.js +0 -11
  114. package/dist/termdb.cohorts.js +0 -11
  115. package/dist/termdb.dapVolcano.js +0 -11
  116. package/dist/termdb.descrstats.js +0 -11
  117. package/dist/termdb.diffMeth.js +0 -11
  118. package/dist/termdb.dmr.js +0 -11
  119. package/dist/termdb.filterTermValues.js +0 -11
  120. package/dist/termdb.isoformAvailability.js +0 -11
  121. package/dist/termdb.numericcategories.js +0 -11
  122. package/dist/termdb.percentile.js +0 -11
  123. package/dist/termdb.profileFormScores.js +0 -11
  124. package/dist/termdb.profileForms2Scores.js +0 -11
  125. package/dist/termdb.profileScores.js +0 -11
  126. package/dist/termdb.proteome.js +0 -11
  127. package/dist/termdb.rootterm.js +0 -11
  128. package/dist/termdb.runChart.js +0 -13
  129. package/dist/termdb.sampleImages.js +0 -11
  130. package/dist/termdb.sampleScatter.js +0 -11
  131. package/dist/termdb.singleSampleMutation.js +0 -11
  132. package/dist/termdb.singlecellDEgenes.js +0 -11
  133. package/dist/termdb.singlecellData.js +0 -11
  134. package/dist/termdb.singlecellSamples.js +0 -11
  135. package/dist/termdb.termchildren.js +0 -11
  136. package/dist/termdb.termsbyids.js +0 -11
  137. package/dist/termdb.topMutatedGenes.js +0 -11
  138. package/dist/termdb.topTermsByType.js +0 -11
  139. package/dist/termdb.topVariablyExpressedGenes.js +0 -11
  140. package/dist/termdb.violinBox.js +0 -17
  141. package/dist/tileserver.js +0 -11
  142. package/dist/wsimages.js +0 -11
  143. package/dist/wsisamples.js +0 -11
  144. package/src/Mclass.ts +0 -8
  145. package/src/dataset.ts +0 -2188
  146. package/src/docs.json +0 -16417
  147. package/src/fileOrUrl.ts +0 -15
  148. package/src/filter.ts +0 -110
  149. package/src/genome.ts +0 -129
  150. package/src/index.ts +0 -94
  151. package/src/routes/aiProjectAdmin.ts +0 -37
  152. package/src/routes/aiProjectSelectedWSImages.ts +0 -47
  153. package/src/routes/aiProjectTrainModel.ts +0 -20
  154. package/src/routes/alphaGenome.ts +0 -27
  155. package/src/routes/alphaGenomeTypes.ts +0 -21
  156. package/src/routes/brainImaging.ts +0 -47
  157. package/src/routes/brainImagingSamples.ts +0 -25
  158. package/src/routes/burden.ts +0 -113
  159. package/src/routes/clearwsisessions.ts +0 -19
  160. package/src/routes/correlationVolcano.ts +0 -51
  161. package/src/routes/dataset.ts +0 -14
  162. package/src/routes/deleteWSITileSelection.ts +0 -25
  163. package/src/routes/dsdata.ts +0 -14
  164. package/src/routes/dzimages.ts +0 -25
  165. package/src/routes/errorResponse.ts +0 -6
  166. package/src/routes/filter.gdc.ts +0 -15
  167. package/src/routes/gdc.grin2.ts +0 -246
  168. package/src/routes/gdc.maf.ts +0 -52
  169. package/src/routes/gdc.mafBuild.ts +0 -20
  170. package/src/routes/genelookup.ts +0 -22
  171. package/src/routes/genesetEnrichment.ts +0 -116
  172. package/src/routes/genesetOverrepresentation.ts +0 -48
  173. package/src/routes/grin2.ts +0 -173
  174. package/src/routes/healthcheck.ts +0 -80
  175. package/src/routes/hicdata.ts +0 -48
  176. package/src/routes/hicgenome.ts +0 -50
  177. package/src/routes/hicstat.ts +0 -57
  178. package/src/routes/img.ts +0 -23
  179. package/src/routes/isoformlst.ts +0 -14
  180. package/src/routes/ntseq.ts +0 -14
  181. package/src/routes/pdomain.ts +0 -14
  182. package/src/routes/routeApi.ts +0 -47
  183. package/src/routes/samplewsimages.ts +0 -44
  184. package/src/routes/saveWSIAnnotation.ts +0 -25
  185. package/src/routes/snp.ts +0 -13
  186. package/src/routes/termdb.DE.ts +0 -226
  187. package/src/routes/termdb.categories.ts +0 -74
  188. package/src/routes/termdb.chat2.ts +0 -190
  189. package/src/routes/termdb.cluster.ts +0 -134
  190. package/src/routes/termdb.cohort.summary.ts +0 -14
  191. package/src/routes/termdb.cohorts.ts +0 -14
  192. package/src/routes/termdb.dapVolcano.ts +0 -35
  193. package/src/routes/termdb.descrstats.ts +0 -75
  194. package/src/routes/termdb.diffMeth.ts +0 -63
  195. package/src/routes/termdb.dmr.ts +0 -121
  196. package/src/routes/termdb.filterTermValues.ts +0 -23
  197. package/src/routes/termdb.isoformAvailability.ts +0 -22
  198. package/src/routes/termdb.numericcategories.ts +0 -32
  199. package/src/routes/termdb.percentile.ts +0 -67
  200. package/src/routes/termdb.profileFormScores.ts +0 -26
  201. package/src/routes/termdb.profileForms2Scores.ts +0 -25
  202. package/src/routes/termdb.profileScores.ts +0 -27
  203. package/src/routes/termdb.proteome.ts +0 -13
  204. package/src/routes/termdb.rootterm.ts +0 -49
  205. package/src/routes/termdb.runChart.ts +0 -66
  206. package/src/routes/termdb.sampleImages.ts +0 -26
  207. package/src/routes/termdb.sampleScatter.ts +0 -60
  208. package/src/routes/termdb.singleSampleMutation.ts +0 -51
  209. package/src/routes/termdb.singlecellDEgenes.ts +0 -50
  210. package/src/routes/termdb.singlecellData.ts +0 -75
  211. package/src/routes/termdb.singlecellSamples.ts +0 -50
  212. package/src/routes/termdb.termchildren.ts +0 -49
  213. package/src/routes/termdb.termsbyids.ts +0 -26
  214. package/src/routes/termdb.topMutatedGenes.ts +0 -51
  215. package/src/routes/termdb.topTermsByType.ts +0 -32
  216. package/src/routes/termdb.topVariablyExpressedGenes.ts +0 -54
  217. package/src/routes/termdb.violinBox.ts +0 -230
  218. package/src/routes/tileserver.ts +0 -14
  219. package/src/routes/wsimages.ts +0 -34
  220. package/src/routes/wsisamples.ts +0 -25
  221. package/src/termdb.matrix.ts +0 -57
  222. package/src/terms/categorical.ts +0 -18
  223. package/src/terms/condition.ts +0 -73
  224. package/src/terms/date.ts +0 -20
  225. package/src/terms/dnaMethylation.ts +0 -28
  226. package/src/terms/geneExpression.ts +0 -38
  227. package/src/terms/geneVariant.ts +0 -132
  228. package/src/terms/isoformExpression.ts +0 -36
  229. package/src/terms/metaboliteIntensity.ts +0 -30
  230. package/src/terms/numeric.ts +0 -278
  231. package/src/terms/proteomeAbundance.ts +0 -38
  232. package/src/terms/q.ts +0 -105
  233. package/src/terms/qualitative.ts +0 -73
  234. package/src/terms/samplelst.ts +0 -34
  235. package/src/terms/singleCellCellType.ts +0 -18
  236. package/src/terms/singleCellGeneExpression.ts +0 -32
  237. package/src/terms/snp.ts +0 -24
  238. package/src/terms/snps.ts +0 -111
  239. package/src/terms/ssGSEA.ts +0 -26
  240. package/src/terms/term.ts +0 -60
  241. package/src/terms/termCollection.ts +0 -139
  242. package/src/terms/tw.ts +0 -64
  243. package/src/termsetting.ts +0 -201
  244. package/src/test/numeric.type.spec.ts +0 -275
  245. package/src/vocab.ts +0 -37

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