@sjcrh/proteinpaint-types 2.169.0 → 2.170.0

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Files changed (37) hide show
  1. package/dist/brainImaging.js +1 -1
  2. package/dist/{chunk-EBPGV76U.js → chunk-33FYSH3O.js} +130 -2
  3. package/dist/{chunk-GIPUG4HD.js → chunk-447IAMTQ.js} +130 -2
  4. package/dist/{chunk-ZXPLL3NT.js → chunk-53QZTLJK.js} +417 -185
  5. package/dist/{chunk-5F24QFE7.js → chunk-BPDR66LV.js} +385 -151
  6. package/dist/{chunk-C27KCAQH.js → chunk-CUU7POGC.js} +417 -185
  7. package/dist/{chunk-GZKTMVAU.js → chunk-HDED6K55.js} +515 -153
  8. package/dist/{chunk-PZHVYGSD.js → chunk-HRH4GGV2.js} +421 -189
  9. package/dist/{chunk-LXW2FSLR.js → chunk-MH3TDIL4.js} +439 -207
  10. package/dist/{chunk-OLWNM7QP.js → chunk-MJEQEGN4.js} +130 -2
  11. package/dist/{chunk-5OMJAZK4.js → chunk-QL6YSLN6.js} +171 -43
  12. package/dist/{chunk-OLXOQLZH.js → chunk-TVS2JEXL.js} +130 -2
  13. package/dist/{chunk-CC32XCET.js → chunk-UQNHLAZN.js} +660 -298
  14. package/dist/{chunk-VQOCGHP2.js → chunk-YCURJJSC.js} +5 -1
  15. package/dist/{chunk-MCL6EDOS.js → chunk-ZAMM6EMS.js} +421 -189
  16. package/dist/correlationVolcano.js +1 -1
  17. package/dist/grin2.js +1 -1
  18. package/dist/index.js +14 -14
  19. package/dist/termdb.boxplot.js +1 -1
  20. package/dist/termdb.categories.js +1 -1
  21. package/dist/termdb.chat.js +1 -1
  22. package/dist/termdb.cluster.js +1 -1
  23. package/dist/termdb.descrstats.js +1 -1
  24. package/dist/termdb.numericcategories.js +1 -1
  25. package/dist/termdb.percentile.js +1 -1
  26. package/dist/termdb.termsbyids.js +1 -1
  27. package/dist/termdb.topTermsByType.js +1 -1
  28. package/dist/termdb.topVariablyExpressedGenes.js +1 -1
  29. package/dist/termdb.violin.js +1 -1
  30. package/package.json +1 -1
  31. package/src/dataset.ts +8 -2
  32. package/src/filter.ts +7 -1
  33. package/src/index.ts +1 -0
  34. package/src/routes/grin2.ts +5 -0
  35. package/src/terms/term.ts +3 -1
  36. package/src/terms/termCollection.ts +52 -0
  37. package/src/terms/tw.ts +3 -2
package/dist/{chunk-VQOCGHP2.js → chunk-YCURJJSC.js} RENAMED
@@ -20,7 +20,7 @@ var GRIN2Payload = {
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  var validGRIN2Request = (input) => {
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  const errors = [];
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  const __is = (input2) => {
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- const $io0 = (input3) => "string" === typeof input3.genome && "string" === typeof input3.dslabel && (void 0 === input3.devicePixelRatio || "number" === typeof input3.devicePixelRatio) && (void 0 === input3.width || "number" === typeof input3.width) && (void 0 === input3.height || "number" === typeof input3.height) && (void 0 === input3.pngDotRadius || "number" === typeof input3.pngDotRadius) && true && (void 0 === input3.qValueThreshold || "number" === typeof input3.qValueThreshold) && true && (void 0 === input3.snvindelOptions || "object" === typeof input3.snvindelOptions && null !== input3.snvindelOptions && false === Array.isArray(input3.snvindelOptions) && $io1(input3.snvindelOptions)) && (void 0 === input3.cnvOptions || "object" === typeof input3.cnvOptions && null !== input3.cnvOptions && false === Array.isArray(input3.cnvOptions) && $io2(input3.cnvOptions)) && (void 0 === input3.fusionOptions || "object" === typeof input3.fusionOptions && null !== input3.fusionOptions && false === Array.isArray(input3.fusionOptions) && $io3(input3.fusionOptions)) && (void 0 === input3.svOptions || "object" === typeof input3.svOptions && null !== input3.svOptions && false === Array.isArray(input3.svOptions) && $io4(input3.svOptions)) && (void 0 === input3.maxGenesToShow || "number" === typeof input3.maxGenesToShow);
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+ const $io0 = (input3) => "string" === typeof input3.genome && "string" === typeof input3.dslabel && (void 0 === input3.devicePixelRatio || "number" === typeof input3.devicePixelRatio) && (void 0 === input3.width || "number" === typeof input3.width) && (void 0 === input3.height || "number" === typeof input3.height) && (void 0 === input3.pngDotRadius || "number" === typeof input3.pngDotRadius) && true && (void 0 === input3.qValueThreshold || "number" === typeof input3.qValueThreshold) && (void 0 === input3.logCutoff || "number" === typeof input3.logCutoff) && true && (void 0 === input3.snvindelOptions || "object" === typeof input3.snvindelOptions && null !== input3.snvindelOptions && false === Array.isArray(input3.snvindelOptions) && $io1(input3.snvindelOptions)) && (void 0 === input3.cnvOptions || "object" === typeof input3.cnvOptions && null !== input3.cnvOptions && false === Array.isArray(input3.cnvOptions) && $io2(input3.cnvOptions)) && (void 0 === input3.fusionOptions || "object" === typeof input3.fusionOptions && null !== input3.fusionOptions && false === Array.isArray(input3.fusionOptions) && $io3(input3.fusionOptions)) && (void 0 === input3.svOptions || "object" === typeof input3.svOptions && null !== input3.svOptions && false === Array.isArray(input3.svOptions) && $io4(input3.svOptions)) && (void 0 === input3.maxGenesToShow || "number" === typeof input3.maxGenesToShow);
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  const $io1 = (input3) => (void 0 === input3.minTotalDepth || "number" === typeof input3.minTotalDepth) && (void 0 === input3.minAltAlleleCount || "number" === typeof input3.minAltAlleleCount) && (void 0 === input3.consequences || Array.isArray(input3.consequences) && input3.consequences.every((elem) => "string" === typeof elem)) && (void 0 === input3.hyperMutator || "number" === typeof input3.hyperMutator) && (void 0 === input3.fivePrimeFlankSize || "number" === typeof input3.fivePrimeFlankSize) && (void 0 === input3.threePrimeFlankSize || "number" === typeof input3.threePrimeFlankSize);
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  const $io2 = (input3) => (void 0 === input3.lossThreshold || "number" === typeof input3.lossThreshold) && (void 0 === input3.gainThreshold || "number" === typeof input3.gainThreshold) && (void 0 === input3.maxSegLength || "number" === typeof input3.maxSegLength) && (void 0 === input3.hyperMutator || "number" === typeof input3.hyperMutator) && (void 0 === input3.fivePrimeFlankSize || "number" === typeof input3.fivePrimeFlankSize) && (void 0 === input3.threePrimeFlankSize || "number" === typeof input3.threePrimeFlankSize);
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  const $io3 = (input3) => (void 0 === input3.fivePrimeFlankSize || "number" === typeof input3.fivePrimeFlankSize) && (void 0 === input3.threePrimeFlankSize || "number" === typeof input3.threePrimeFlankSize);
@@ -58,6 +58,10 @@ var validGRIN2Request = (input) => {
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  path: _path2 + ".qValueThreshold",
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  expected: "(number | undefined)",
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  value: input3.qValueThreshold
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+ }), void 0 === input3.logCutoff || "number" === typeof input3.logCutoff || $report(_exceptionable2, {
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+ path: _path2 + ".logCutoff",
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+ expected: "(number | undefined)",
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+ value: input3.logCutoff
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  }), true, void 0 === input3.snvindelOptions || ("object" === typeof input3.snvindelOptions && null !== input3.snvindelOptions && false === Array.isArray(input3.snvindelOptions) || $report(_exceptionable2, {
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  path: _path2 + ".snvindelOptions",
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  expected: "(__type | undefined)",