@sjcrh/proteinpaint-types 2.147.1 → 2.147.2-0

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Files changed (13) hide show
  1. package/dist/{chunk-NQUMNEVO.js → chunk-5MGSKBUU.js} +12 -12
  2. package/dist/{chunk-2ZJS3NUY.js → chunk-KQNLROUN.js} +2 -2
  3. package/dist/{chunk-OOQIRLS5.js → chunk-TTUU5XQC.js} +2 -2
  4. package/dist/index.js +3 -3
  5. package/dist/termdb.cluster.js +1 -1
  6. package/dist/termdb.percentile.js +1 -1
  7. package/dist/termdb.topTermsByType.js +1 -1
  8. package/package.json +1 -1
  9. package/src/terms/date.ts +1 -1
  10. package/src/terms/geneExpression.ts +3 -1
  11. package/src/terms/metaboliteIntensity.ts +4 -2
  12. package/src/terms/numeric.ts +5 -1
  13. package/src/terms/ssGSEA.ts +5 -1
package/dist/{chunk-NQUMNEVO.js → chunk-5MGSKBUU.js} RENAMED
@@ -2800,11 +2800,11 @@ var validTermdbClusterRequest = (input) => {
2800
2800
  value: input3.type
2801
2801
  }), ("object" === typeof input3.term && null !== input3.term && false === Array.isArray(input3.term) || $report(_exceptionable2, {
2802
2802
  path: _path2 + ".term",
2803
- expected: '(BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { name: string; type: "metaboliteIntensity"; metabolite: string; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | never.o10 | never.o11 | never.o12 | never.o8 | never.o9)',
2803
+ expected: '(BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { id?: string | undefined; name: string; type: "metaboliteIntensity"; metabolite: string; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | never.o10 | never.o11 | never.o12 | never.o8 | never.o9)',
2804
2804
  value: input3.term
2805
2805
  })) && $vu13(input3.term, _path2 + ".term", _exceptionable2) || $report(_exceptionable2, {
2806
2806
  path: _path2 + ".term",
2807
- expected: '(BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { name: string; type: "metaboliteIntensity"; metabolite: string; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | never.o10 | never.o11 | never.o12 | never.o8 | never.o9)',
2807
+ expected: '(BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { id?: string | undefined; name: string; type: "metaboliteIntensity"; metabolite: string; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | never.o10 | never.o11 | never.o12 | never.o8 | never.o9)',
2808
2808
  value: input3.term
2809
2809
  }), ("object" === typeof input3.q && null !== input3.q || $report(_exceptionable2, {
2810
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  path: _path2 + ".q",
@@ -2931,11 +2931,11 @@ var validTermdbClusterRequest = (input) => {
2931
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  value: input3.type
2932
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  }), ("object" === typeof input3.term && null !== input3.term && false === Array.isArray(input3.term) || $report(_exceptionable2, {
2933
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  path: _path2 + ".term",
2934
- expected: '(BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { name: string; type: "metaboliteIntensity"; metabolite: string; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | never.o10 | never.o11 | never.o12 | never.o8 | never.o9)',
2934
+ expected: '(BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { id?: string | undefined; name: string; type: "metaboliteIntensity"; metabolite: string; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | never.o10 | never.o11 | never.o12 | never.o8 | never.o9)',
2935
2935
  value: input3.term
2936
2936
  })) && $vu13(input3.term, _path2 + ".term", _exceptionable2) || $report(_exceptionable2, {
2937
2937
  path: _path2 + ".term",
2938
- expected: '(BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { name: string; type: "metaboliteIntensity"; metabolite: string; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | never.o10 | never.o11 | never.o12 | never.o8 | never.o9)',
2938
+ expected: '(BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { id?: string | undefined; name: string; type: "metaboliteIntensity"; metabolite: string; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | never.o10 | never.o11 | never.o12 | never.o8 | never.o9)',
2939
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  value: input3.term
2940
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  }), ("object" === typeof input3.q && null !== input3.q || $report(_exceptionable2, {
2941
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  path: _path2 + ".q",
@@ -2976,11 +2976,11 @@ var validTermdbClusterRequest = (input) => {
2976
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  value: input3.type
2977
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  }), ("object" === typeof input3.term && null !== input3.term && false === Array.isArray(input3.term) || $report(_exceptionable2, {
2978
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  path: _path2 + ".term",
2979
- expected: '(BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { name: string; type: "metaboliteIntensity"; metabolite: string; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | never.o10 | never.o11 | never.o12 | never.o8 | never.o9)',
2979
+ expected: '(BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { id?: string | undefined; name: string; type: "metaboliteIntensity"; metabolite: string; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | never.o10 | never.o11 | never.o12 | never.o8 | never.o9)',
2980
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  value: input3.term
2981
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  })) && $vu13(input3.term, _path2 + ".term", _exceptionable2) || $report(_exceptionable2, {
2982
2982
  path: _path2 + ".term",
2983
- expected: '(BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { name: string; type: "metaboliteIntensity"; metabolite: string; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | never.o10 | never.o11 | never.o12 | never.o8 | never.o9)',
2983
+ expected: '(BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { id?: string | undefined; name: string; type: "metaboliteIntensity"; metabolite: string; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | never.o10 | never.o11 | never.o12 | never.o8 | never.o9)',
2984
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  value: input3.term
2985
2985
  }), ("object" === typeof input3.q && null !== input3.q || $report(_exceptionable2, {
2986
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  path: _path2 + ".q",
@@ -3021,11 +3021,11 @@ var validTermdbClusterRequest = (input) => {
3021
3021
  value: input3.type
3022
3022
  }), ("object" === typeof input3.term && null !== input3.term && false === Array.isArray(input3.term) || $report(_exceptionable2, {
3023
3023
  path: _path2 + ".term",
3024
- expected: '(BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { name: string; type: "metaboliteIntensity"; metabolite: string; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | never.o10 | never.o11 | never.o12 | never.o8 | never.o9)',
3024
+ expected: '(BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { id?: string | undefined; name: string; type: "metaboliteIntensity"; metabolite: string; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | never.o10 | never.o11 | never.o12 | never.o8 | never.o9)',
3025
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  value: input3.term
3026
3026
  })) && $vu13(input3.term, _path2 + ".term", _exceptionable2) || $report(_exceptionable2, {
3027
3027
  path: _path2 + ".term",
3028
- expected: '(BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { name: string; type: "metaboliteIntensity"; metabolite: string; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | never.o10 | never.o11 | never.o12 | never.o8 | never.o9)',
3028
+ expected: '(BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { id?: string | undefined; name: string; type: "metaboliteIntensity"; metabolite: string; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | never.o10 | never.o11 | never.o12 | never.o8 | never.o9)',
3029
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  value: input3.term
3030
3030
  }), ("object" === typeof input3.q && null !== input3.q && false === Array.isArray(input3.q) || $report(_exceptionable2, {
3031
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  path: _path2 + ".q",
@@ -3066,11 +3066,11 @@ var validTermdbClusterRequest = (input) => {
3066
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  value: input3.type
3067
3067
  }), ("object" === typeof input3.term && null !== input3.term && false === Array.isArray(input3.term) || $report(_exceptionable2, {
3068
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  path: _path2 + ".term",
3069
- expected: '(BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { name: string; type: "metaboliteIntensity"; metabolite: string; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | never.o10 | never.o11 | never.o12 | never.o8 | never.o9)',
3069
+ expected: '(BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { id?: string | undefined; name: string; type: "metaboliteIntensity"; metabolite: string; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | never.o10 | never.o11 | never.o12 | never.o8 | never.o9)',
3070
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  value: input3.term
3071
3071
  })) && $vu13(input3.term, _path2 + ".term", _exceptionable2) || $report(_exceptionable2, {
3072
3072
  path: _path2 + ".term",
3073
- expected: '(BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { name: string; type: "metaboliteIntensity"; metabolite: string; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | never.o10 | never.o11 | never.o12 | never.o8 | never.o9)',
3073
+ expected: '(BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { id?: string | undefined; name: string; type: "metaboliteIntensity"; metabolite: string; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | never.o10 | never.o11 | never.o12 | never.o8 | never.o9)',
3074
3074
  value: input3.term
3075
3075
  }), ("object" === typeof input3.q && null !== input3.q || $report(_exceptionable2, {
3076
3076
  path: _path2 + ".q",
@@ -3794,11 +3794,11 @@ var validTermdbClusterResponse = (input) => {
3794
3794
  })].every((flag) => flag);
3795
3795
  const $vo10 = (input3, _path2, _exceptionable2 = true) => [("object" === typeof input3.term && null !== input3.term || $report(_exceptionable2, {
3796
3796
  path: _path2 + ".term",
3797
- expected: '(BaseTerm & Coord & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & Gene & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { genes?: string[] | undefined; name?: string | undefined; type: "ssGSEA"; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { id?: string | undefined; type: "integer" | "float"; bins: PresetNumericBins; values?: TermValues | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { name: string; type: "date"; bins?: PresetNumericBins | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { name: string; type: "metaboliteIntensity"; metabolite: string; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { type: "geneExpression"; bins?: PresetNumericBins | undefined; } & Coord | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { type: "geneExpression"; bins?: PresetNumericBins | undefined; } & Gene | BaseTerm & { id: string; name?: string | undefined; type: "categorical"; values: TermValues; groupsetting: TermGroupSetting; } | BaseTerm & { id: string; reachedVariantLimit?: boolean | undefined; snps?: SnpsEntry[] | undefined; } | BaseTerm & { type: "condition"; values: TermValues; } | BaseTerm & { type: "singleCellCellType"; sample: string; plot: string; groupsetting: TermGroupSetting; values: TermValues; } | BaseTerm & { type: "snp"; id: string; name: string; chr: string; start: number; stop: number; ref: string; alt: string[]; groupsetting: TermGroupSetting; values: TermValues; } | BaseTerm & { values: SampleLstTermValues; })',
3797
+ expected: '(BaseTerm & Coord & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & Gene & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { genes?: string[] | undefined; name: string; type: "ssGSEA"; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { id: string; type: "integer" | "float"; bins: PresetNumericBins; values?: TermValues | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { id?: string | undefined; name: string; type: "metaboliteIntensity"; metabolite: string; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { name: string; type: "date"; bins?: PresetNumericBins | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { type: "geneExpression"; bins?: PresetNumericBins | undefined; } & Coord | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { type: "geneExpression"; bins?: PresetNumericBins | undefined; } & Gene | BaseTerm & { id: string; name?: string | undefined; type: "categorical"; values: TermValues; groupsetting: TermGroupSetting; } | BaseTerm & { id: string; reachedVariantLimit?: boolean | undefined; snps?: SnpsEntry[] | undefined; } | BaseTerm & { type: "condition"; values: TermValues; } | BaseTerm & { type: "singleCellCellType"; sample: string; plot: string; groupsetting: TermGroupSetting; values: TermValues; } | BaseTerm & { type: "snp"; id: string; name: string; chr: string; start: number; stop: number; ref: string; alt: string[]; groupsetting: TermGroupSetting; values: TermValues; } | BaseTerm & { values: SampleLstTermValues; })',
3798
3798
  value: input3.term
3799
3799
  })) && $vu4(input3.term, _path2 + ".term", _exceptionable2) || $report(_exceptionable2, {
3800
3800
  path: _path2 + ".term",
3801
- expected: '(BaseTerm & Coord & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & Gene & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { genes?: string[] | undefined; name?: string | undefined; type: "ssGSEA"; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { id?: string | undefined; type: "integer" | "float"; bins: PresetNumericBins; values?: TermValues | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { name: string; type: "date"; bins?: PresetNumericBins | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { name: string; type: "metaboliteIntensity"; metabolite: string; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { type: "geneExpression"; bins?: PresetNumericBins | undefined; } & Coord | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { type: "geneExpression"; bins?: PresetNumericBins | undefined; } & Gene | BaseTerm & { id: string; name?: string | undefined; type: "categorical"; values: TermValues; groupsetting: TermGroupSetting; } | BaseTerm & { id: string; reachedVariantLimit?: boolean | undefined; snps?: SnpsEntry[] | undefined; } | BaseTerm & { type: "condition"; values: TermValues; } | BaseTerm & { type: "singleCellCellType"; sample: string; plot: string; groupsetting: TermGroupSetting; values: TermValues; } | BaseTerm & { type: "snp"; id: string; name: string; chr: string; start: number; stop: number; ref: string; alt: string[]; groupsetting: TermGroupSetting; values: TermValues; } | BaseTerm & { values: SampleLstTermValues; })',
3801
+ expected: '(BaseTerm & Coord & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & Gene & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { genes?: string[] | undefined; name: string; type: "ssGSEA"; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { id: string; type: "integer" | "float"; bins: PresetNumericBins; values?: TermValues | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { id?: string | undefined; name: string; type: "metaboliteIntensity"; metabolite: string; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { name: string; type: "date"; bins?: PresetNumericBins | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { type: "geneExpression"; bins?: PresetNumericBins | undefined; } & Coord | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { type: "geneExpression"; bins?: PresetNumericBins | undefined; } & Gene | BaseTerm & { id: string; name?: string | undefined; type: "categorical"; values: TermValues; groupsetting: TermGroupSetting; } | BaseTerm & { id: string; reachedVariantLimit?: boolean | undefined; snps?: SnpsEntry[] | undefined; } | BaseTerm & { type: "condition"; values: TermValues; } | BaseTerm & { type: "singleCellCellType"; sample: string; plot: string; groupsetting: TermGroupSetting; values: TermValues; } | BaseTerm & { type: "snp"; id: string; name: string; chr: string; start: number; stop: number; ref: string; alt: string[]; groupsetting: TermGroupSetting; values: TermValues; } | BaseTerm & { values: SampleLstTermValues; })',
3802
3802
  value: input3.term
3803
3803
  }), true].every((flag) => flag);
3804
3804
  const $vo11 = (input3, _path2, _exceptionable2 = true) => ["string" === typeof input3.id || $report(_exceptionable2, {
package/dist/{chunk-2ZJS3NUY.js → chunk-KQNLROUN.js} RENAMED
@@ -2298,11 +2298,11 @@ var validTermdbTopTermsByTypeResponse = (input) => {
2298
2298
  value: input3.terms
2299
2299
  })) && input3.terms.map((elem, _index1) => ("object" === typeof elem && null !== elem || $report(_exceptionable2, {
2300
2300
  path: _path2 + ".terms[" + _index1 + "]",
2301
- expected: '(BaseTerm & Coord & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & Gene & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { genes?: string[] | undefined; name?: string | undefined; type: "ssGSEA"; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { id?: string | undefined; type: "integer" | "float"; bins: PresetNumericBins; values?: TermValues | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { name: string; type: "date"; bins?: PresetNumericBins | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { name: string; type: "metaboliteIntensity"; metabolite: string; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { type: "geneExpression"; bins?: PresetNumericBins | undefined; } & Coord | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { type: "geneExpression"; bins?: PresetNumericBins | undefined; } & Gene | BaseTerm & { id: string; name?: string | undefined; type: "categorical"; values: TermValues; groupsetting: TermGroupSetting; } | BaseTerm & { id: string; reachedVariantLimit?: boolean | undefined; snps?: SnpsEntry[] | undefined; } | BaseTerm & { type: "condition"; values: TermValues; } | BaseTerm & { type: "singleCellCellType"; sample: string; plot: string; groupsetting: TermGroupSetting; values: TermValues; } | BaseTerm & { type: "snp"; id: string; name: string; chr: string; start: number; stop: number; ref: string; alt: string[]; groupsetting: TermGroupSetting; values: TermValues; } | BaseTerm & { values: SampleLstTermValues; })',
2301
+ expected: '(BaseTerm & Coord & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & Gene & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { genes?: string[] | undefined; name: string; type: "ssGSEA"; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { id: string; type: "integer" | "float"; bins: PresetNumericBins; values?: TermValues | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { id?: string | undefined; name: string; type: "metaboliteIntensity"; metabolite: string; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { name: string; type: "date"; bins?: PresetNumericBins | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { type: "geneExpression"; bins?: PresetNumericBins | undefined; } & Coord | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { type: "geneExpression"; bins?: PresetNumericBins | undefined; } & Gene | BaseTerm & { id: string; name?: string | undefined; type: "categorical"; values: TermValues; groupsetting: TermGroupSetting; } | BaseTerm & { id: string; reachedVariantLimit?: boolean | undefined; snps?: SnpsEntry[] | undefined; } | BaseTerm & { type: "condition"; values: TermValues; } | BaseTerm & { type: "singleCellCellType"; sample: string; plot: string; groupsetting: TermGroupSetting; values: TermValues; } | BaseTerm & { type: "snp"; id: string; name: string; chr: string; start: number; stop: number; ref: string; alt: string[]; groupsetting: TermGroupSetting; values: TermValues; } | BaseTerm & { values: SampleLstTermValues; })',
2302
2302
  value: elem
2303
2303
  })) && $vu0(elem, _path2 + ".terms[" + _index1 + "]", _exceptionable2) || $report(_exceptionable2, {
2304
2304
  path: _path2 + ".terms[" + _index1 + "]",
2305
- expected: '(BaseTerm & Coord & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & Gene & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { genes?: string[] | undefined; name?: string | undefined; type: "ssGSEA"; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { id?: string | undefined; type: "integer" | "float"; bins: PresetNumericBins; values?: TermValues | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { name: string; type: "date"; bins?: PresetNumericBins | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { name: string; type: "metaboliteIntensity"; metabolite: string; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { type: "geneExpression"; bins?: PresetNumericBins | undefined; } & Coord | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { type: "geneExpression"; bins?: PresetNumericBins | undefined; } & Gene | BaseTerm & { id: string; name?: string | undefined; type: "categorical"; values: TermValues; groupsetting: TermGroupSetting; } | BaseTerm & { id: string; reachedVariantLimit?: boolean | undefined; snps?: SnpsEntry[] | undefined; } | BaseTerm & { type: "condition"; values: TermValues; } | BaseTerm & { type: "singleCellCellType"; sample: string; plot: string; groupsetting: TermGroupSetting; values: TermValues; } | BaseTerm & { type: "snp"; id: string; name: string; chr: string; start: number; stop: number; ref: string; alt: string[]; groupsetting: TermGroupSetting; values: TermValues; } | BaseTerm & { values: SampleLstTermValues; })',
2305
+ expected: '(BaseTerm & Coord & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & Gene & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { genes?: string[] | undefined; name: string; type: "ssGSEA"; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { id: string; type: "integer" | "float"; bins: PresetNumericBins; values?: TermValues | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { id?: string | undefined; name: string; type: "metaboliteIntensity"; metabolite: string; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { name: string; type: "date"; bins?: PresetNumericBins | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { type: "geneExpression"; bins?: PresetNumericBins | undefined; } & Coord | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { type: "geneExpression"; bins?: PresetNumericBins | undefined; } & Gene | BaseTerm & { id: string; name?: string | undefined; type: "categorical"; values: TermValues; groupsetting: TermGroupSetting; } | BaseTerm & { id: string; reachedVariantLimit?: boolean | undefined; snps?: SnpsEntry[] | undefined; } | BaseTerm & { type: "condition"; values: TermValues; } | BaseTerm & { type: "singleCellCellType"; sample: string; plot: string; groupsetting: TermGroupSetting; values: TermValues; } | BaseTerm & { type: "snp"; id: string; name: string; chr: string; start: number; stop: number; ref: string; alt: string[]; groupsetting: TermGroupSetting; values: TermValues; } | BaseTerm & { values: SampleLstTermValues; })',
2306
2306
  value: elem
2307
2307
  })).every((flag) => flag) || $report(_exceptionable2, {
2308
2308
  path: _path2 + ".terms",
package/dist/{chunk-OOQIRLS5.js → chunk-TTUU5XQC.js} RENAMED
@@ -291,11 +291,11 @@ var validPercentileRequest = (input) => {
291
291
  value: input3.getpercentile
292
292
  }), ("object" === typeof input3.term && null !== input3.term || $report(_exceptionable2, {
293
293
  path: _path2 + ".term",
294
- expected: '(BaseTerm & Coord & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & Gene & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { genes?: string[] | undefined; name?: string | undefined; type: "ssGSEA"; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { id?: string | undefined; type: "integer" | "float"; bins: PresetNumericBins; values?: TermValues | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { name: string; type: "date"; bins?: PresetNumericBins | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { name: string; type: "metaboliteIntensity"; metabolite: string; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { type: "geneExpression"; bins?: PresetNumericBins | undefined; } & Coord | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { type: "geneExpression"; bins?: PresetNumericBins | undefined; } & Gene | BaseTerm & { id: string; name?: string | undefined; type: "categorical"; values: TermValues; groupsetting: TermGroupSetting; } | BaseTerm & { id: string; reachedVariantLimit?: boolean | undefined; snps?: SnpsEntry[] | undefined; } | BaseTerm & { type: "condition"; values: TermValues; } | BaseTerm & { type: "singleCellCellType"; sample: string; plot: string; groupsetting: TermGroupSetting; values: TermValues; } | BaseTerm & { type: "snp"; id: string; name: string; chr: string; start: number; stop: number; ref: string; alt: string[]; groupsetting: TermGroupSetting; values: TermValues; } | BaseTerm & { values: SampleLstTermValues; })',
294
+ expected: '(BaseTerm & Coord & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & Gene & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { genes?: string[] | undefined; name: string; type: "ssGSEA"; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { id: string; type: "integer" | "float"; bins: PresetNumericBins; values?: TermValues | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { id?: string | undefined; name: string; type: "metaboliteIntensity"; metabolite: string; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { name: string; type: "date"; bins?: PresetNumericBins | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { type: "geneExpression"; bins?: PresetNumericBins | undefined; } & Coord | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { type: "geneExpression"; bins?: PresetNumericBins | undefined; } & Gene | BaseTerm & { id: string; name?: string | undefined; type: "categorical"; values: TermValues; groupsetting: TermGroupSetting; } | BaseTerm & { id: string; reachedVariantLimit?: boolean | undefined; snps?: SnpsEntry[] | undefined; } | BaseTerm & { type: "condition"; values: TermValues; } | BaseTerm & { type: "singleCellCellType"; sample: string; plot: string; groupsetting: TermGroupSetting; values: TermValues; } | BaseTerm & { type: "snp"; id: string; name: string; chr: string; start: number; stop: number; ref: string; alt: string[]; groupsetting: TermGroupSetting; values: TermValues; } | BaseTerm & { values: SampleLstTermValues; })',
295
295
  value: input3.term
296
296
  })) && $vu4(input3.term, _path2 + ".term", _exceptionable2) || $report(_exceptionable2, {
297
297
  path: _path2 + ".term",
298
- expected: '(BaseTerm & Coord & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & Gene & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { genes?: string[] | undefined; name?: string | undefined; type: "ssGSEA"; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { id?: string | undefined; type: "integer" | "float"; bins: PresetNumericBins; values?: TermValues | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { name: string; type: "date"; bins?: PresetNumericBins | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { name: string; type: "metaboliteIntensity"; metabolite: string; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { type: "geneExpression"; bins?: PresetNumericBins | undefined; } & Coord | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { type: "geneExpression"; bins?: PresetNumericBins | undefined; } & Gene | BaseTerm & { id: string; name?: string | undefined; type: "categorical"; values: TermValues; groupsetting: TermGroupSetting; } | BaseTerm & { id: string; reachedVariantLimit?: boolean | undefined; snps?: SnpsEntry[] | undefined; } | BaseTerm & { type: "condition"; values: TermValues; } | BaseTerm & { type: "singleCellCellType"; sample: string; plot: string; groupsetting: TermGroupSetting; values: TermValues; } | BaseTerm & { type: "snp"; id: string; name: string; chr: string; start: number; stop: number; ref: string; alt: string[]; groupsetting: TermGroupSetting; values: TermValues; } | BaseTerm & { values: SampleLstTermValues; })',
298
+ expected: '(BaseTerm & Coord & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & Gene & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { genes?: string[] | undefined; name: string; type: "ssGSEA"; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { id: string; type: "integer" | "float"; bins: PresetNumericBins; values?: TermValues | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { id?: string | undefined; name: string; type: "metaboliteIntensity"; metabolite: string; bins?: PresetNumericBins | undefined; unit?: string | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { name: string; type: "date"; bins?: PresetNumericBins | undefined; } | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { type: "geneExpression"; bins?: PresetNumericBins | undefined; } & Coord | BaseTerm & { continuousColorScale?: { minColor: string; maxColor: string; } | undefined; unit?: string | undefined; } & { type: "geneExpression"; bins?: PresetNumericBins | undefined; } & Gene | BaseTerm & { id: string; name?: string | undefined; type: "categorical"; values: TermValues; groupsetting: TermGroupSetting; } | BaseTerm & { id: string; reachedVariantLimit?: boolean | undefined; snps?: SnpsEntry[] | undefined; } | BaseTerm & { type: "condition"; values: TermValues; } | BaseTerm & { type: "singleCellCellType"; sample: string; plot: string; groupsetting: TermGroupSetting; values: TermValues; } | BaseTerm & { type: "snp"; id: string; name: string; chr: string; start: number; stop: number; ref: string; alt: string[]; groupsetting: TermGroupSetting; values: TermValues; } | BaseTerm & { values: SampleLstTermValues; })',
299
299
  value: input3.term
300
300
  }), void 0 === input3.filter || ("object" === typeof input3.filter && null !== input3.filter || $report(_exceptionable2, {
301
301
  path: _path2 + ".filter",
package/dist/index.js CHANGED
@@ -52,7 +52,7 @@ import {
52
52
  termdbTopTermsByTypePayload,
53
53
  validTermdbTopTermsByTypeRequest,
54
54
  validTermdbTopTermsByTypeResponse
55
- } from "./chunk-2ZJS3NUY.js";
55
+ } from "./chunk-KQNLROUN.js";
56
56
  import {
57
57
  termdbTopVariablyExpressedGenesPayload,
58
58
  validTermdbTopVariablyExpressedGenesRequest,
@@ -72,7 +72,7 @@ import {
72
72
  percentilePayload,
73
73
  validPercentileRequest,
74
74
  validPercentileResponse
75
- } from "./chunk-OOQIRLS5.js";
75
+ } from "./chunk-TTUU5XQC.js";
76
76
  import {
77
77
  ProfileFormScoresPayload,
78
78
  validProfileFormScoresRequest,
@@ -122,7 +122,7 @@ import {
122
122
  termdbClusterPayload,
123
123
  validTermdbClusterRequest,
124
124
  validTermdbClusterResponse
125
- } from "./chunk-NQUMNEVO.js";
125
+ } from "./chunk-5MGSKBUU.js";
126
126
  import {
127
127
  termdbCohortSummaryPayload,
128
128
  validTermdbCohortSummaryRequest,
package/dist/termdb.cluster.js CHANGED
@@ -2,7 +2,7 @@ import {
2
2
  termdbClusterPayload,
3
3
  validTermdbClusterRequest,
4
4
  validTermdbClusterResponse
5
- } from "./chunk-NQUMNEVO.js";
5
+ } from "./chunk-5MGSKBUU.js";
6
6
  import "./chunk-YNHC5SXO.js";
7
7
  export {
8
8
  termdbClusterPayload,
package/dist/termdb.percentile.js CHANGED
@@ -2,7 +2,7 @@ import {
2
2
  percentilePayload,
3
3
  validPercentileRequest,
4
4
  validPercentileResponse
5
- } from "./chunk-OOQIRLS5.js";
5
+ } from "./chunk-TTUU5XQC.js";
6
6
  import "./chunk-YNHC5SXO.js";
7
7
  export {
8
8
  percentilePayload,
package/dist/termdb.topTermsByType.js CHANGED
@@ -2,7 +2,7 @@ import {
2
2
  termdbTopTermsByTypePayload,
3
3
  validTermdbTopTermsByTypeRequest,
4
4
  validTermdbTopTermsByTypeResponse
5
- } from "./chunk-2ZJS3NUY.js";
5
+ } from "./chunk-KQNLROUN.js";
6
6
  import "./chunk-YNHC5SXO.js";
7
7
  export {
8
8
  termdbTopTermsByTypePayload,
package/package.json CHANGED
@@ -1,6 +1,6 @@
1
1
  {
2
2
  "name": "@sjcrh/proteinpaint-types",
3
- "version": "2.147.1",
3
+ "version": "2.147.2-0",
4
4
  "type": "module",
5
5
  "description": "Shared type definitions between ProteinPaint server and client code",
6
6
  "main": "src/index.ts",
package/src/terms/date.ts CHANGED
@@ -15,6 +15,6 @@ export type DateTerm = NumericBaseTerm & {
15
15
 
16
16
  export type DateTW = NumTW & { term: DateTerm }
17
17
 
18
- type RawDateTerm = DateTerm & { name?: string }
18
+ export type RawDateTerm = DateTerm & { name?: string }
19
19
 
20
20
  export type RawDateTW = RawNumTW & { term: RawDateTerm }
package/src/terms/geneExpression.ts CHANGED
@@ -33,4 +33,6 @@ export type GeneExpressionTerm = NumericBaseTerm & {
33
33
 
34
34
  export type GeneExpressionTW = NumTW & { term: GeneExpressionTerm }
35
35
 
36
- export type RawGeneExpTW = RawNumTW & { term: GeneExpressionTerm & { name?: string } }
36
+ export type RawGeneExpTerm = GeneExpressionTerm & { name?: string }
37
+
38
+ export type RawGeneExpTW = RawNumTW & { term: RawGeneExpTerm }
package/src/terms/metaboliteIntensity.ts CHANGED
@@ -8,6 +8,7 @@ MetaboliteIntensityTermSettingInstance
8
8
  */
9
9
 
10
10
  export type MetaboliteIntensityTerm = NumericBaseTerm & {
11
+ id?: string
11
12
  name: string
12
13
  type: 'metaboliteIntensity'
13
14
  metabolite: string
@@ -17,7 +18,8 @@ export type MetaboliteIntensityTerm = NumericBaseTerm & {
17
18
 
18
19
  export type MetaboliteIntensityTW = NumTW & { term: MetaboliteIntensityTerm }
19
20
 
20
- type RawMetabolitIntensityTerm = {
21
+ export type RawMetaboliteIntensityTerm = NumericBaseTerm & {
22
+ id?: string
21
23
  type: 'metaboliteIntensity'
22
24
  metabolite: string
23
25
  name?: string
@@ -25,4 +27,4 @@ type RawMetabolitIntensityTerm = {
25
27
  unit?: string
26
28
  }
27
29
 
28
- export type RawMetaboliteIntensityTW = RawNumTW & { term: RawMetabolitIntensityTerm }
30
+ export type RawMetaboliteIntensityTW = RawNumTW & { term: RawMetaboliteIntensityTerm }
package/src/terms/numeric.ts CHANGED
@@ -46,12 +46,16 @@ export type NumericBaseTerm = BaseTerm & {
46
46
  }
47
47
 
48
48
  export type NumericDictTerm = NumericBaseTerm & {
49
- id?: string
49
+ id: string
50
50
  type: 'integer' | 'float'
51
51
  bins: PresetNumericBins
52
52
  values?: TermValues
53
53
  }
54
54
 
55
+ export type RawNumericDictTerm = NumericDictTerm & {
56
+ id?: string
57
+ }
58
+
55
59
  export type NumericTerm = NumericDictTerm | GeneExpressionTerm | MetaboliteIntensityTerm | DateTerm | SsGSEATerm
56
60
 
57
61
  export type StartUnboundedBin = {
package/src/terms/ssGSEA.ts CHANGED
@@ -11,12 +11,16 @@ export type SsGSEATerm = NumericBaseTerm & {
11
11
  /** term.name: geneset db term name for native term, and user-defined name for custom term */
12
12
  /** custom term has list of gene names used for computing score */
13
13
  genes?: string[]
14
- name?: string
14
+ name: string
15
15
  type: 'ssGSEA'
16
16
  bins?: PresetNumericBins
17
17
  unit?: string
18
18
  }
19
19
 
20
+ export type RawSsGSEATerm = SsGSEATerm & {
21
+ name?: string
22
+ }
23
+
20
24
  export type SsGSEATW = NumTW & { term: SsGSEATerm }
21
25
 
22
26
  export type RawSsGSEATW = RawNumTW & { term: SsGSEATerm }