@sjcrh/proteinpaint-types 2.146.1 → 2.146.4-1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/{chunk-FXXE4S7M.js → chunk-G5KSPYQG.js} +34 -55
- package/dist/{chunk-V2TEJZ2V.js → chunk-NBV7HYBA.js} +56 -33
- package/dist/{chunk-U3AOS5QJ.js → chunk-OZ3CVAFP.js} +2 -2
- package/dist/index.js +3 -3
- package/dist/termdb.boxplot.js +1 -1
- package/dist/termdb.descrstats.js +1 -1
- package/dist/termdb.topVariablyExpressedGenes.js +1 -1
- package/package.json +1 -1
- package/src/routes/termdb.boxplot.ts +3 -2
- package/src/routes/termdb.descrstats.ts +7 -10
- package/src/terms/q.ts +1 -0
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@@ -4140,51 +4140,41 @@ var validDescrStatsRequest = (input) => {
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var validDescrStatsResponse = (input) => {
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const errors = [];
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const __is = (input2) => {
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const $
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const $
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return "object" === typeof input2 && null !== input2 && $iu0(input2);
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const $join = import_typia.createValidate.join;
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const $io0 = (input3) => Object.keys(input3).every((key) => {
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const value = input3[key];
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if (void 0 === value)
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return true;
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if (RegExp(/(.*)/).test(key))
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return "object" === typeof value && null !== value && ("string" === typeof value.key && "string" === typeof value.label && "number" === typeof value.value);
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return true;
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});
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return "object" === typeof input2 && null !== input2 && false === Array.isArray(input2) && $io0(input2);
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};
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if (false === __is(input)) {
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const $report = import_typia.createValidate.report(errors);
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((input2, _path, _exceptionable = true) => {
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const $
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value
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path: _path2 + ".
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expected: "entries",
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value: elem
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})).every((flag) => flag) || $report(_exceptionable2, {
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path: _path2 + ".values",
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expected: "Array<entries>",
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value: input3.values
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})].every((flag) => flag);
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const $vo2 = (input3, _path2, _exceptionable2 = true) => ["string" === typeof input3.id || $report(_exceptionable2, {
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path: _path2 + ".id",
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const $join = import_typia.createValidate.join;
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const $vo0 = (input3, _path2, _exceptionable2 = true) => [false === _exceptionable2 || Object.keys(input3).map((key) => {
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const value = input3[key];
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if (void 0 === value)
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return true;
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if (RegExp(/(.*)/).test(key))
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return ("object" === typeof value && null !== value || $report(_exceptionable2, {
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path: _path2 + $join(key),
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expected: "__type",
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value
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})) && $vo1(value, _path2 + $join(key), _exceptionable2) || $report(_exceptionable2, {
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path: _path2 + $join(key),
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expected: "__type",
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value
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});
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return true;
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}).every((flag) => flag)].every((flag) => flag);
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const $vo1 = (input3, _path2, _exceptionable2 = true) => ["string" === typeof input3.key || $report(_exceptionable2, {
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path: _path2 + ".key",
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expected: "string",
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value: input3.
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value: input3.key
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}), "string" === typeof input3.label || $report(_exceptionable2, {
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path: _path2 + ".label",
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expected: "string",
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@@ -4194,24 +4184,13 @@ var validDescrStatsResponse = (input) => {
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expected: "number",
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value: input3.value
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})].every((flag) => flag);
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if (void 0 !== input3.status)
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return $vo0(input3, _path2, _exceptionable2);
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if (void 0 !== input3.values)
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return $vo1(input3, _path2, _exceptionable2);
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return $report(_exceptionable2, {
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path: _path2,
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expected: "(ErrorResponse | ValidResponse)",
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value: input3
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});
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})();
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return ("object" === typeof input2 && null !== input2 || $report(true, {
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return ("object" === typeof input2 && null !== input2 && false === Array.isArray(input2) || $report(true, {
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path: _path + "",
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expected: "
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expected: "DescrStats",
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value: input2
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})) && $
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})) && $vo0(input2, _path + "", true) || $report(true, {
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path: _path + "",
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expected: "
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expected: "DescrStats",
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value: input2
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});
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})(input, "$input", true);
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@@ -4176,7 +4176,7 @@ var validBoxPlotResponse = (input) => {
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const errors = [];
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const __is = (input2) => {
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const $join = import_typia.createValidate.join;
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const $io0 = (input3) => (void 0 === input3.absMin || "number" === typeof input3.absMin) && (void 0 === input3.absMax || "number" === typeof input3.absMax) && ("object" === typeof input3.charts && null !== input3.charts && false === Array.isArray(input3.charts) && $io1(input3.charts)) && (null === input3.uncomputableValues || Array.isArray(input3.uncomputableValues) && input3.uncomputableValues.every((elem) => "object" === typeof elem && null !== elem && $
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const $io0 = (input3) => (void 0 === input3.absMin || "number" === typeof input3.absMin) && (void 0 === input3.absMax || "number" === typeof input3.absMax) && ("object" === typeof input3.charts && null !== input3.charts && false === Array.isArray(input3.charts) && $io1(input3.charts)) && (null === input3.uncomputableValues || Array.isArray(input3.uncomputableValues) && input3.uncomputableValues.every((elem) => "object" === typeof elem && null !== elem && $io9(elem))) && true && ("object" === typeof input3.descrStats && null !== input3.descrStats && false === Array.isArray(input3.descrStats) && $io6(input3.descrStats));
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const $io1 = (input3) => Object.keys(input3).every((key) => {
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const value = input3[key];
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if (void 0 === value)
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@@ -4185,13 +4185,20 @@ var validBoxPlotResponse = (input) => {
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return "object" === typeof value && null !== value && $io2(value);
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return true;
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});
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const $io2 = (input3) => "string" === typeof input3.chartId && (Array.isArray(input3.plots) && input3.plots.every((elem) => "object" === typeof elem && null !== elem && $io3(elem))) && true && (void 0 === input3.absMin || "number" === typeof input3.absMin) && (void 0 === input3.absMax || "number" === typeof input3.absMax) && (null === input3.uncomputableValues || void 0 === input3.uncomputableValues || Array.isArray(input3.uncomputableValues) && input3.uncomputableValues.every((elem) => "object" === typeof elem && null !== elem && $
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const $io3 = (input3) => "object" === typeof input3.boxplot && null !== input3.boxplot && $io4(input3.boxplot) && (void 0 === input3.color || "string" === typeof input3.color) && (
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const $io2 = (input3) => "string" === typeof input3.chartId && (Array.isArray(input3.plots) && input3.plots.every((elem) => "object" === typeof elem && null !== elem && $io3(elem))) && true && (void 0 === input3.absMin || "number" === typeof input3.absMin) && (void 0 === input3.absMax || "number" === typeof input3.absMax) && (null === input3.uncomputableValues || void 0 === input3.uncomputableValues || Array.isArray(input3.uncomputableValues) && input3.uncomputableValues.every((elem) => "object" === typeof elem && null !== elem && $io8(elem)));
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const $io3 = (input3) => "object" === typeof input3.boxplot && null !== input3.boxplot && $io4(input3.boxplot) && (void 0 === input3.color || "string" === typeof input3.color) && ("object" === typeof input3.descrStats && null !== input3.descrStats && false === Array.isArray(input3.descrStats) && $io6(input3.descrStats)) && (void 0 === input3.isHidden || "boolean" === typeof input3.isHidden) && "string" === typeof input3.key && true && (void 0 === input3.seriesId || "string" === typeof input3.seriesId);
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const $io4 = (input3) => (void 0 === input3.w1 || "number" === typeof input3.w1) && (void 0 === input3.w2 || "number" === typeof input3.w2) && "number" === typeof input3.p05 && "number" === typeof input3.p25 && "number" === typeof input3.p50 && "number" === typeof input3.p75 && "number" === typeof input3.p95 && "number" === typeof input3.iqr && (Array.isArray(input3.out) && input3.out.every((elem) => "object" === typeof elem && null !== elem && $io5(elem))) && "string" === typeof input3.label;
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const $io5 = (input3) => "number" === typeof input3.value;
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const $io6 = (input3) =>
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const $io6 = (input3) => Object.keys(input3).every((key) => {
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const value = input3[key];
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if (void 0 === value)
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return true;
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if (RegExp(/(.*)/).test(key))
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return "object" === typeof value && null !== value && ("string" === typeof value.key && "string" === typeof value.label && "number" === typeof value.value);
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return true;
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});
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const $io8 = (input3) => "string" === typeof input3.label && "number" === typeof input3.value;
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const $io9 = (input3) => "string" === typeof input3.label && "number" === typeof input3.value;
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return "object" === typeof input2 && null !== input2 && $io0(input2);
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};
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value: input3.uncomputableValues
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})) && input3.uncomputableValues.map((elem, _index1) => ("object" === typeof elem && null !== elem || $report(_exceptionable2, {
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path: _path2 + ".uncomputableValues[" + _index1 + "]",
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expected: "__type.
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expected: "__type.o4",
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})) && $vo9(elem, _path2 + ".uncomputableValues[" + _index1 + "]", _exceptionable2) || $report(_exceptionable2, {
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path: _path2 + ".uncomputableValues[" + _index1 + "]",
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value: elem
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})).every((flag) => flag) || $report(_exceptionable2, {
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value: input3.uncomputableValues
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}), true,
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}), true, ("object" === typeof input3.descrStats && null !== input3.descrStats && false === Array.isArray(input3.descrStats) || $report(_exceptionable2, {
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path: _path2 + ".descrStats",
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expected: "DescrStats",
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value: input3.descrStats
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})) && $vo6(input3.descrStats, _path2 + ".descrStats", _exceptionable2) || $report(_exceptionable2, {
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value: input3.descrStats
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})].every((flag) => flag);
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const $vo1 = (input3, _path2, _exceptionable2 = true) => [false === _exceptionable2 || Object.keys(input3).map((key) => {
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})) && input3.uncomputableValues.map((elem, _index3) => ("object" === typeof elem && null !== elem || $report(_exceptionable2, {
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path: _path2 + ".uncomputableValues[" + _index3 + "]",
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})) && $
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})) && $vo8(elem, _path2 + ".uncomputableValues[" + _index3 + "]", _exceptionable2) || $report(_exceptionable2, {
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path: _path2 + ".uncomputableValues[" + _index3 + "]",
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expected: "__type.o3",
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value: elem
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})).every((flag) => flag) || $report(_exceptionable2, {
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path: _path2 + ".color",
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expected: "(string | undefined)",
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value: input3.color
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}), (Array.isArray(input3.descrStats) || $report(_exceptionable2, {
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}), ("object" === typeof input3.descrStats && null !== input3.descrStats && false === Array.isArray(input3.descrStats) || $report(_exceptionable2, {
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expected: "DescrStats",
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value: input3.descrStats
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path: _path2 + ".descrStats[" + _index4 + "]",
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})).every((flag) => flag) || $report(_exceptionable2, {
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})) && $vo6(input3.descrStats, _path2 + ".descrStats", _exceptionable2) || $report(_exceptionable2, {
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value: input3.descrStats
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}), void 0 === input3.isHidden || "boolean" === typeof input3.isHidden || $report(_exceptionable2, {
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value: input3.out
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})) && input3.out.map((elem, _index4) => ("object" === typeof elem && null !== elem || $report(_exceptionable2, {
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path: _path2 + ".out[" + _index4 + "]",
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expected: "__type.o1",
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value: elem
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})) && $vo5(elem, _path2 + ".out[" +
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})) && $vo5(elem, _path2 + ".out[" + _index4 + "]", _exceptionable2) || $report(_exceptionable2, {
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path: _path2 + ".out[" + _index4 + "]",
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value: elem
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})).every((flag) => flag) || $report(_exceptionable2, {
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value: input3.value
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4393
4400
|
})].every((flag) => flag);
|
|
4394
|
-
const $vo6 = (input3, _path2, _exceptionable2 = true) => [
|
|
4395
|
-
|
|
4401
|
+
const $vo6 = (input3, _path2, _exceptionable2 = true) => [false === _exceptionable2 || Object.keys(input3).map((key) => {
|
|
4402
|
+
const value = input3[key];
|
|
4403
|
+
if (void 0 === value)
|
|
4404
|
+
return true;
|
|
4405
|
+
if (RegExp(/(.*)/).test(key))
|
|
4406
|
+
return ("object" === typeof value && null !== value || $report(_exceptionable2, {
|
|
4407
|
+
path: _path2 + $join(key),
|
|
4408
|
+
expected: "__type.o2",
|
|
4409
|
+
value
|
|
4410
|
+
})) && $vo7(value, _path2 + $join(key), _exceptionable2) || $report(_exceptionable2, {
|
|
4411
|
+
path: _path2 + $join(key),
|
|
4412
|
+
expected: "__type.o2",
|
|
4413
|
+
value
|
|
4414
|
+
});
|
|
4415
|
+
return true;
|
|
4416
|
+
}).every((flag) => flag)].every((flag) => flag);
|
|
4417
|
+
const $vo7 = (input3, _path2, _exceptionable2 = true) => ["string" === typeof input3.key || $report(_exceptionable2, {
|
|
4418
|
+
path: _path2 + ".key",
|
|
4396
4419
|
expected: "string",
|
|
4397
|
-
value: input3.
|
|
4420
|
+
value: input3.key
|
|
4398
4421
|
}), "string" === typeof input3.label || $report(_exceptionable2, {
|
|
4399
4422
|
path: _path2 + ".label",
|
|
4400
4423
|
expected: "string",
|
|
@@ -4404,7 +4427,7 @@ var validBoxPlotResponse = (input) => {
|
|
|
4404
4427
|
expected: "number",
|
|
4405
4428
|
value: input3.value
|
|
4406
4429
|
})].every((flag) => flag);
|
|
4407
|
-
const $
|
|
4430
|
+
const $vo8 = (input3, _path2, _exceptionable2 = true) => ["string" === typeof input3.label || $report(_exceptionable2, {
|
|
4408
4431
|
path: _path2 + ".label",
|
|
4409
4432
|
expected: "string",
|
|
4410
4433
|
value: input3.label
|
|
@@ -4413,7 +4436,7 @@ var validBoxPlotResponse = (input) => {
|
|
|
4413
4436
|
expected: "number",
|
|
4414
4437
|
value: input3.value
|
|
4415
4438
|
})].every((flag) => flag);
|
|
4416
|
-
const $
|
|
4439
|
+
const $vo9 = (input3, _path2, _exceptionable2 = true) => ["string" === typeof input3.label || $report(_exceptionable2, {
|
|
4417
4440
|
path: _path2 + ".label",
|
|
4418
4441
|
expected: "string",
|
|
4419
4442
|
value: input3.label
|
|
@@ -24,7 +24,7 @@ var validTermdbTopVariablyExpressedGenesRequest = (input) => {
|
|
|
24
24
|
const $join = import_typia.createValidate.join;
|
|
25
25
|
const $io0 = (input3) => "string" === typeof input3.genome && "string" === typeof input3.dslabel && "number" === typeof input3.maxGenes && (void 0 === input3.geneSet || "object" === typeof input3.geneSet && null !== input3.geneSet && $io1(input3.geneSet)) && (void 0 === input3.min_median_log2_uqfpkm || "number" === typeof input3.min_median_log2_uqfpkm) && (void 0 === input3.filter_extreme_values || "number" === typeof input3.filter_extreme_values) && (void 0 === input3.min_count || "number" === typeof input3.min_count) && (void 0 === input3.min_total_count || "number" === typeof input3.min_total_count) && (void 0 === input3.rank_type || "object" === typeof input3.rank_type && null !== input3.rank_type && $io2(input3.rank_type)) && (void 0 === input3.filter || "object" === typeof input3.filter && null !== input3.filter && $io3(input3.filter)) && true;
|
|
26
26
|
const $io1 = (input3) => ("all" === input3.type || "custom" === input3.type || "msigdb" === input3.type) && (null === input3.geneList || Array.isArray(input3.geneList) && input3.geneList.every((elem) => "string" === typeof elem));
|
|
27
|
-
const $io2 = (input3) => "
|
|
27
|
+
const $io2 = (input3) => "var" === input3.type || "iqr" === input3.type;
|
|
28
28
|
const $io3 = (input3) => "tvslst" === input3.type && "boolean" === typeof input3["in"] && "string" === typeof input3.join && (void 0 === input3.tag || "string" === typeof input3.tag) && (Array.isArray(input3.lst) && input3.lst.every((elem) => "object" === typeof elem && null !== elem && $iu0(elem)));
|
|
29
29
|
const $io4 = (input3) => "tvs" === input3.type && ("object" === typeof input3.tvs && null !== input3.tvs && $iu4(input3.tvs));
|
|
30
30
|
const $io5 = (input3) => (void 0 === input3.join || "string" === typeof input3.join) && (void 0 === input3.isnot || "boolean" === typeof input3.isnot) && ("object" === typeof input3.term && null !== input3.term && $io6(input3.term)) && (void 0 === input3.groupset_label || "string" === typeof input3.groupset_label) && (Array.isArray(input3.values) && input3.values.every((elem) => "object" === typeof elem && null !== elem && false === Array.isArray(elem) && $io8(elem)));
|
|
@@ -240,7 +240,7 @@ var validTermdbTopVariablyExpressedGenesRequest = (input) => {
|
|
|
240
240
|
expected: "(Array<string> | null)",
|
|
241
241
|
value: input3.geneList
|
|
242
242
|
})].every((flag) => flag);
|
|
243
|
-
const $vo2 = (input3, _path2, _exceptionable2 = true) => ["
|
|
243
|
+
const $vo2 = (input3, _path2, _exceptionable2 = true) => ["var" === input3.type || "iqr" === input3.type || $report(_exceptionable2, {
|
|
244
244
|
path: _path2 + ".type",
|
|
245
245
|
expected: '("iqr" | "var")',
|
|
246
246
|
value: input3.type
|
package/dist/index.js
CHANGED
|
@@ -47,7 +47,7 @@ import {
|
|
|
47
47
|
termdbTopVariablyExpressedGenesPayload,
|
|
48
48
|
validTermdbTopVariablyExpressedGenesRequest,
|
|
49
49
|
validTermdbTopVariablyExpressedGenesResponse
|
|
50
|
-
} from "./chunk-
|
|
50
|
+
} from "./chunk-OZ3CVAFP.js";
|
|
51
51
|
import {
|
|
52
52
|
validViolinRequest,
|
|
53
53
|
validViolinResponse,
|
|
@@ -97,7 +97,7 @@ import {
|
|
|
97
97
|
boxplotPayload,
|
|
98
98
|
validBoxPlotRequest,
|
|
99
99
|
validBoxPlotResponse
|
|
100
|
-
} from "./chunk-
|
|
100
|
+
} from "./chunk-NBV7HYBA.js";
|
|
101
101
|
import {
|
|
102
102
|
termdbCategoriesPayload,
|
|
103
103
|
validCategoriesRequest,
|
|
@@ -127,7 +127,7 @@ import {
|
|
|
127
127
|
descrStatsPayload,
|
|
128
128
|
validDescrStatsRequest,
|
|
129
129
|
validDescrStatsResponse
|
|
130
|
-
} from "./chunk-
|
|
130
|
+
} from "./chunk-G5KSPYQG.js";
|
|
131
131
|
import {
|
|
132
132
|
FilterTermValuesPayload,
|
|
133
133
|
validFilterTermValuesRequest,
|
package/dist/termdb.boxplot.js
CHANGED
|
@@ -2,7 +2,7 @@ import {
|
|
|
2
2
|
termdbTopVariablyExpressedGenesPayload,
|
|
3
3
|
validTermdbTopVariablyExpressedGenesRequest,
|
|
4
4
|
validTermdbTopVariablyExpressedGenesResponse
|
|
5
|
-
} from "./chunk-
|
|
5
|
+
} from "./chunk-OZ3CVAFP.js";
|
|
6
6
|
import "./chunk-YNHC5SXO.js";
|
|
7
7
|
export {
|
|
8
8
|
termdbTopVariablyExpressedGenesPayload,
|
package/package.json
CHANGED
|
@@ -1,6 +1,7 @@
|
|
|
1
1
|
import type { RoutePayload } from './routeApi.js'
|
|
2
2
|
import type { TermWrapper } from '../terms/tw.ts'
|
|
3
3
|
import type { Filter } from '../filter.ts'
|
|
4
|
+
import type { DescrStats } from './termdb.descrstats.ts'
|
|
4
5
|
|
|
5
6
|
/**Args set in Termdb vocab and from mass box plot */
|
|
6
7
|
export type BoxPlotRequest = {
|
|
@@ -35,7 +36,7 @@ export type BoxPlotResponse = {
|
|
|
35
36
|
/** Categories not shown in the final plot */
|
|
36
37
|
uncomputableValues: { label: string; value: number }[] | null
|
|
37
38
|
error?: any
|
|
38
|
-
descrStats:
|
|
39
|
+
descrStats: DescrStats
|
|
39
40
|
}
|
|
40
41
|
|
|
41
42
|
// chart containing a set of boxplots
|
|
@@ -58,7 +59,7 @@ export type BoxPlotEntry = {
|
|
|
58
59
|
boxplot: BoxPlotData & { label: string }
|
|
59
60
|
/** color matching the value/category color */
|
|
60
61
|
color?: string
|
|
61
|
-
descrStats:
|
|
62
|
+
descrStats: DescrStats
|
|
62
63
|
/** Pertains to an uncomputable term value and
|
|
63
64
|
* whether or not the plot is hidden by default */
|
|
64
65
|
isHidden?: boolean
|
|
@@ -1,7 +1,6 @@
|
|
|
1
1
|
import type { RoutePayload } from './routeApi.js'
|
|
2
2
|
import type { Filter } from '../filter.ts'
|
|
3
3
|
import type { TermWrapper } from '../terms/tw.ts'
|
|
4
|
-
import type { ErrorResponse } from './errorResponse.ts'
|
|
5
4
|
|
|
6
5
|
export type DescrStatsRequest = {
|
|
7
6
|
/** genome label in the serverconfig.json */
|
|
@@ -20,17 +19,15 @@ export type DescrStatsRequest = {
|
|
|
20
19
|
__protected__?: any //reuse definition from termdb.matrix.ts!!!
|
|
21
20
|
}
|
|
22
21
|
|
|
23
|
-
|
|
24
|
-
|
|
25
|
-
|
|
26
|
-
|
|
22
|
+
export type DescrStats = {
|
|
23
|
+
[key: string]: {
|
|
24
|
+
key: string
|
|
25
|
+
label: string
|
|
26
|
+
value: number
|
|
27
|
+
}
|
|
27
28
|
}
|
|
28
29
|
|
|
29
|
-
type
|
|
30
|
-
values: entries[]
|
|
31
|
-
}
|
|
32
|
-
|
|
33
|
-
export type DescrStatsResponse = ValidResponse | ErrorResponse
|
|
30
|
+
export type DescrStatsResponse = DescrStats
|
|
34
31
|
|
|
35
32
|
export const descrStatsPayload: RoutePayload = {
|
|
36
33
|
request: {
|
package/src/terms/q.ts
CHANGED
|
@@ -36,6 +36,7 @@ export type RawCustomGroupsetQ = MinBaseQ & {
|
|
|
36
36
|
}
|
|
37
37
|
/** deprecated nested object, will be handled by reshapeLegacyTW() in TwRouter */
|
|
38
38
|
groupsetting?: { inuse?: boolean } & GroupSettingQ
|
|
39
|
+
sampleCounts?: { key: string; value?: number; label?: string }[]
|
|
39
40
|
}
|
|
40
41
|
|
|
41
42
|
export type HiddenValues = {
|