@sjcrh/proteinpaint-types 2.144.0 → 2.145.0

package/dist/{chunk-N7C4SRFX.js → chunk-2WSENLMK.js}

@@ -325,7 +325,7 @@ var validRunGRIN2Request = (input) => {
   const errors = [];
   const __is = (input2) => {
     const $join = import_typia.createValidate.join;
-    const $io0 = (input3) => "object" === typeof input3.caseFiles && null !== input3.caseFiles && false === Array.isArray(input3.caseFiles) && $io1(input3.caseFiles) && (void 0 === input3.mafOptions || "object" === typeof input3.mafOptions && null !== input3.mafOptions && false === Array.isArray(input3.mafOptions) && $io3(input3.mafOptions)) && (void 0 === input3.cnvOptions || "object" === typeof input3.cnvOptions && null !== input3.cnvOptions && false === Array.isArray(input3.cnvOptions) && $io4(input3.cnvOptions));
+    const $io0 = (input3) => "object" === typeof input3.caseFiles && null !== input3.caseFiles && false === Array.isArray(input3.caseFiles) && $io1(input3.caseFiles) && (void 0 === input3.mafOptions || "object" === typeof input3.mafOptions && null !== input3.mafOptions && false === Array.isArray(input3.mafOptions) && $io3(input3.mafOptions)) && (void 0 === input3.cnvOptions || "object" === typeof input3.cnvOptions && null !== input3.cnvOptions && false === Array.isArray(input3.cnvOptions) && $io4(input3.cnvOptions)) && (void 0 === input3.devicePixelRatio || "number" === typeof input3.devicePixelRatio) && (void 0 === input3.plot_width || "number" === typeof input3.plot_width) && (void 0 === input3.plot_height || "number" === typeof input3.plot_height) && (void 0 === input3.pngDotRadius || "number" === typeof input3.pngDotRadius);
     const $io1 = (input3) => Object.keys(input3).every((key) => {
       const value = input3[key];
       if (void 0 === value)
@@ -367,6 +367,22 @@ var validRunGRIN2Request = (input) => {
         path: _path2 + ".cnvOptions",
         expected: "(__type.o3 | undefined)",
         value: input3.cnvOptions
+      }), void 0 === input3.devicePixelRatio || "number" === typeof input3.devicePixelRatio || $report(_exceptionable2, {
+        path: _path2 + ".devicePixelRatio",
+        expected: "(number | undefined)",
+        value: input3.devicePixelRatio
+      }), void 0 === input3.plot_width || "number" === typeof input3.plot_width || $report(_exceptionable2, {
+        path: _path2 + ".plot_width",
+        expected: "(number | undefined)",
+        value: input3.plot_width
+      }), void 0 === input3.plot_height || "number" === typeof input3.plot_height || $report(_exceptionable2, {
+        path: _path2 + ".plot_height",
+        expected: "(number | undefined)",
+        value: input3.plot_height
+      }), void 0 === input3.pngDotRadius || "number" === typeof input3.pngDotRadius || $report(_exceptionable2, {
+        path: _path2 + ".pngDotRadius",
+        expected: "(number | undefined)",
+        value: input3.pngDotRadius
       })].every((flag) => flag);
       const $vo1 = (input3, _path2, _exceptionable2 = true) => [false === _exceptionable2 || Object.keys(input3).map((key) => {
         const value = input3[key];

package/dist/gdc.grin2.js

@@ -5,7 +5,7 @@ import {
   validGdcGRIN2listResponse,
   validRunGRIN2Request,
   validRunGRIN2Response
-} from "./chunk-N7C4SRFX.js";
+} from "./chunk-2WSENLMK.js";
 import "./chunk-YNHC5SXO.js";
 export {
   gdcGRIN2listPayload,

package/dist/index.js

@@ -230,7 +230,7 @@ import {
   validGdcGRIN2listResponse,
   validRunGRIN2Request,
   validRunGRIN2Response
-} from "./chunk-N7C4SRFX.js";
+} from "./chunk-2WSENLMK.js";
 import {
   gdcMafPayload,
   validGdcMafRequest,

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@sjcrh/proteinpaint-types",
-  "version": "2.144.0",
+  "version": "2.145.0",
   "type": "module",
   "description": "Shared type definitions between ProteinPaint server and client code",
   "main": "src/index.ts",

package/src/routes/gdc.grin2.ts

@@ -120,6 +120,13 @@ export type RunGRIN2Request = {
 		/** Hypermutator max cut off for CNVs per case */
 		hyperMutator?: number // Default: 500
 	}
+	/** Device pixel ratio for rendering */
+	devicePixelRatio?: number // 2
+	/** Plot dimensions */
+	plot_width?: number // 1000
+	plot_height?: number // 400
+	/** Radius of the PNG rendered dots */
+	pngDotRadius?: number // 2
 }
 
 /** Error entry from failed file downloads */

package/src/terms/geneVariant.ts

@@ -1,5 +1,4 @@
-import type { MinBaseQ, BaseTerm, TermGroupSetting, BaseTW, TermValues, BaseGroupSet, FilterGroup } from '../index.ts'
-import type { TermSettingInstance } from '../termsetting.ts'
+import type { MinBaseQ, BaseTerm, TermGroupSetting, BaseTW, TermValues, BaseGroupSet } from '../index.ts'
 
 // q types
 export type GvBaseQ = MinBaseQ & {
@@ -101,14 +100,6 @@ export type GvCustomGsTW = BaseTW & {
 export type RawGvTW = RawGvValuesTW | RawGvPredefinedGsTW | RawGvCustomGsTW
 export type GvTW = GvValuesTW | GvPredefinedGsTW | GvCustomGsTW
 
-// termsetting types
-export type GeneVariantTermSettingInstance = TermSettingInstance & {
-	q: GvQ
-	term: GvTerm
-	category2samplecount: any
-	groups: FilterGroup[] // will store groups created in edit UI
-}
-
 // miscellaneous types
 export type DtTerm = {
 	id: string

package/src/terms/samplelst.ts

@@ -1,6 +1,5 @@
 import type { BaseTerm, MinBaseQ } from '../index.ts'
 import type { TermWrapper } from './tw.ts'
-import type { TermSettingInstance } from '../termsetting.ts'
 
 /*
 --------EXPORTED--------
@@ -33,9 +32,3 @@ export type SampleLstTW = TermWrapper & {
 	q: SampleLstQ
 	term: SampleLstTerm
 }
-
-//temporary, will eventually change to SampleLstHandler
-export type SampleLstTermSettingInstance = TermSettingInstance & {
-	q: SampleLstQ
-	term: SampleLstTerm
-}