@sjcrh/proteinpaint-types 2.138.3-5 → 2.139.0

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Files changed (33) hide show
  1. package/dist/brainImaging.js +1 -1
  2. package/dist/{chunk-CC3OBRKE.js → chunk-2QKCLUH3.js} +10 -10
  3. package/dist/{chunk-QG776KAI.js → chunk-34LXTZYA.js} +10 -10
  4. package/dist/{chunk-6HAS5WRS.js → chunk-4S36DRJ4.js} +1190 -390
  5. package/dist/{chunk-2YASZMH3.js → chunk-5BKOSJEU.js} +13 -13
  6. package/dist/{chunk-IY6W7HXW.js → chunk-F2ZZ5J3F.js} +10 -10
  7. package/dist/{chunk-DD2RLZHC.js → chunk-G5BYLEJC.js} +3 -3
  8. package/dist/{chunk-JKBVXIRQ.js → chunk-HJ7XFSJK.js} +3 -3
  9. package/dist/{chunk-I2BMMKPN.js → chunk-KDHGWAOS.js} +10 -10
  10. package/dist/{chunk-LTGT4NK4.js → chunk-NHELOLDH.js} +19 -19
  11. package/dist/{chunk-7FTOFTNK.js → chunk-P3Z422N2.js} +3 -3
  12. package/dist/{chunk-O3NHQOWL.js → chunk-Y6Z6XAFN.js} +3 -3
  13. package/dist/{chunk-HCBXL376.js → chunk-ZHCVV36H.js} +10 -10
  14. package/dist/correlationVolcano.js +1 -1
  15. package/dist/index.js +12 -12
  16. package/dist/termdb.boxplot.js +1 -1
  17. package/dist/termdb.categories.js +1 -1
  18. package/dist/termdb.cluster.js +1 -1
  19. package/dist/termdb.descrstats.js +1 -1
  20. package/dist/termdb.numericcategories.js +1 -1
  21. package/dist/termdb.percentile.js +1 -1
  22. package/dist/termdb.termsbyids.js +1 -1
  23. package/dist/termdb.topTermsByType.js +1 -1
  24. package/dist/termdb.topVariablyExpressedGenes.js +1 -1
  25. package/dist/termdb.violin.js +1 -1
  26. package/package.json +1 -1
  27. package/src/dataset.ts +9 -1
  28. package/src/index.ts +1 -0
  29. package/src/routes/termdb.percentile.ts +5 -3
  30. package/src/terms/geneExpression.ts +4 -1
  31. package/src/terms/numeric.ts +1 -1
  32. package/src/terms/ssGSEA.ts +26 -0
  33. package/src/vocab.ts +1 -1
package/dist/brainImaging.js CHANGED
@@ -2,7 +2,7 @@ import {
2
2
  brainImagingPayload,
3
3
  validBrainImagingRequest,
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4
  validBrainImagingResponse
5
- } from "./chunk-JKBVXIRQ.js";
5
+ } from "./chunk-HJ7XFSJK.js";
6
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  import "./chunk-CNSSF43V.js";
7
7
  export {
8
8
  brainImagingPayload,
package/dist/{chunk-CC3OBRKE.js → chunk-2QKCLUH3.js} RENAMED
@@ -126,7 +126,7 @@ var validTermsByIdsResponse = (input) => {
126
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  const $io19 = (input3) => "boolean" === typeof input3.disabled && (void 0 === input3.lst || Array.isArray(input3.lst) && input3.lst.every((elem) => "object" === typeof elem && null !== elem && $io20(elem)));
127
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  const $io20 = (input3) => "string" === typeof input3.name && (void 0 === input3.is_grade || "boolean" === typeof input3.is_grade) && (void 0 === input3.is_subcondition || "boolean" === typeof input3.is_subcondition) && (void 0 === input3.dt || "number" === typeof input3.dt) && (Array.isArray(input3.groups) && input3.groups.every((elem) => "object" === typeof elem && null !== elem && $iu0(elem)));
128
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  const $io21 = (input3) => (void 0 === input3.join || "string" === typeof input3.join) && (void 0 === input3.isnot || "boolean" === typeof input3.isnot) && ("object" === typeof input3.term && null !== input3.term && $io22(input3.term)) && (Array.isArray(input3.ranges) && input3.ranges.every((elem) => "object" === typeof elem && null !== elem && $iu2(elem))) && (Array.isArray(input3.values) && input3.values.every((elem) => "object" === typeof elem && null !== elem && $io30(elem)));
129
- const $io22 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && ("integer" === input3.type || "float" === input3.type || "geneExpression" === input3.type || "metaboliteIntensity" === input3.type || "date" === input3.type) && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io17(input3.values)) && (void 0 === input3.skipValuesBuild || "boolean" === typeof input3.skipValuesBuild) && ("object" === typeof input3.bins && null !== input3.bins && $io23(input3.bins)) && (void 0 === input3.unit || "string" === typeof input3.unit) && (void 0 === input3.continuousColorScale || "object" === typeof input3.continuousColorScale && null !== input3.continuousColorScale && $io29(input3.continuousColorScale));
129
+ const $io22 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && ("integer" === input3.type || "float" === input3.type || "geneExpression" === input3.type || "metaboliteIntensity" === input3.type || "date" === input3.type || "ssGSEA" === input3.type) && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io17(input3.values)) && (void 0 === input3.skipValuesBuild || "boolean" === typeof input3.skipValuesBuild) && ("object" === typeof input3.bins && null !== input3.bins && $io23(input3.bins)) && (void 0 === input3.unit || "string" === typeof input3.unit) && (void 0 === input3.continuousColorScale || "object" === typeof input3.continuousColorScale && null !== input3.continuousColorScale && $io29(input3.continuousColorScale));
130
130
  const $io23 = (input3) => "object" === typeof input3["default"] && null !== input3["default"] && $iu9(input3["default"]) && ("object" === typeof input3.less && null !== input3.less && $iu9(input3.less)) && (void 0 === input3.label_offset || "number" === typeof input3.label_offset) && (void 0 === input3.label_offset_ignored || "boolean" === typeof input3.label_offset_ignored) && (void 0 === input3.rounding || "string" === typeof input3.rounding) && (void 0 === input3.min || "number" === typeof input3.min) && (void 0 === input3.max || "number" === typeof input3.max);
131
131
  const $io24 = (input3) => (void 0 === input3.hiddenValues || "object" === typeof input3.hiddenValues && null !== input3.hiddenValues && false === Array.isArray(input3.hiddenValues) && $io5(input3.hiddenValues)) && (void 0 === input3.isAtomic || true === input3.isAtomic) && (void 0 === input3.name || "string" === typeof input3.name) && (void 0 === input3.reuseId || "string" === typeof input3.reuseId) && "regular-bin" === input3.type && (void 0 === input3.mode || "discrete" === input3.mode) && "number" === typeof input3.bin_size && ("object" === typeof input3.first_bin && null !== input3.first_bin && $iu4(input3.first_bin)) && (void 0 === input3.last_bin || "object" === typeof input3.last_bin && null !== input3.last_bin && $iu5(input3.last_bin)) && (void 0 === input3.label_offset || "number" === typeof input3.label_offset);
132
132
  const $io25 = (input3) => true === input3.startunbounded && (void 0 === input3.startinclusive || false === input3.startinclusive) && "number" === typeof input3.stop && (void 0 === input3.stopinclusive || "boolean" === typeof input3.stopinclusive) && (void 0 === input3.stopunbounded || false === input3.stopunbounded) && (void 0 === input3.label || "string" === typeof input3.label);
@@ -161,7 +161,7 @@ var validTermsByIdsResponse = (input) => {
161
161
  const $io54 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "geneVariant" === input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io17(input3.values)) && (void 0 === input3.skipValuesBuild || "boolean" === typeof input3.skipValuesBuild) && "gene" === input3.kind && "string" === typeof input3.gene && (void 0 === input3.chr || "string" === typeof input3.chr) && (void 0 === input3.start || "number" === typeof input3.start) && (void 0 === input3.stop || "number" === typeof input3.stop) && (Array.isArray(input3.genes) && input3.genes.every((elem) => "object" === typeof elem && null !== elem && $iu3(elem))) && ("object" === typeof input3.groupsetting && null !== input3.groupsetting && $io19(input3.groupsetting)) && (Array.isArray(input3.childTerms) && input3.childTerms.every((elem) => "object" === typeof elem && null !== elem && $io35(elem)));
162
162
  const $io55 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "geneVariant" === input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io17(input3.values)) && (void 0 === input3.skipValuesBuild || "boolean" === typeof input3.skipValuesBuild) && "coord" === input3.kind && "string" === typeof input3.chr && "number" === typeof input3.start && "number" === typeof input3.stop && (Array.isArray(input3.genes) && input3.genes.every((elem) => "object" === typeof elem && null !== elem && $iu3(elem))) && ("object" === typeof input3.groupsetting && null !== input3.groupsetting && $io19(input3.groupsetting)) && (Array.isArray(input3.childTerms) && input3.childTerms.every((elem) => "object" === typeof elem && null !== elem && $io35(elem)));
163
163
  const $io56 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "categorical" === input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io17(input3.values)) && (void 0 === input3.skipValuesBuild || "boolean" === typeof input3.skipValuesBuild) && ("object" === typeof input3.groupsetting && null !== input3.groupsetting && $io19(input3.groupsetting));
164
- const $io57 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && ("integer" === input3.type || "float" === input3.type || "geneExpression" === input3.type || "metaboliteIntensity" === input3.type || "date" === input3.type) && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io17(input3.values)) && (void 0 === input3.skipValuesBuild || "boolean" === typeof input3.skipValuesBuild) && ("object" === typeof input3.bins && null !== input3.bins && $io23(input3.bins)) && (void 0 === input3.unit || "string" === typeof input3.unit) && (void 0 === input3.continuousColorScale || "object" === typeof input3.continuousColorScale && null !== input3.continuousColorScale && $io29(input3.continuousColorScale));
164
+ const $io57 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && ("integer" === input3.type || "float" === input3.type || "geneExpression" === input3.type || "metaboliteIntensity" === input3.type || "date" === input3.type || "ssGSEA" === input3.type) && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io17(input3.values)) && (void 0 === input3.skipValuesBuild || "boolean" === typeof input3.skipValuesBuild) && ("object" === typeof input3.bins && null !== input3.bins && $io23(input3.bins)) && (void 0 === input3.unit || "string" === typeof input3.unit) && (void 0 === input3.continuousColorScale || "object" === typeof input3.continuousColorScale && null !== input3.continuousColorScale && $io29(input3.continuousColorScale));
165
165
  const $io58 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "condition" === input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io17(input3.values)) && (void 0 === input3.skipValuesBuild || "boolean" === typeof input3.skipValuesBuild);
166
166
  const $io59 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "string" === typeof input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io17(input3.values)) && (void 0 === input3.skipValuesBuild || "boolean" === typeof input3.skipValuesBuild) && (void 0 === input3.reachedVariantLimit || "boolean" === typeof input3.reachedVariantLimit) && (void 0 === input3.snps || Array.isArray(input3.snps) && input3.snps.every((elem) => "object" === typeof elem && null !== elem && $io50(elem)));
167
167
  const $io60 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "string" === typeof input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io61(input3.values)) && (void 0 === input3.skipValuesBuild || "boolean" === typeof input3.skipValuesBuild);
@@ -304,7 +304,7 @@ var validTermsByIdsResponse = (input) => {
304
304
  return $io55(input3);
305
305
  if ("categorical" === input3.type)
306
306
  return $io56(input3);
307
- if ("integer" === input3.type || "float" === input3.type || "geneExpression" === input3.type || "metaboliteIntensity" === input3.type || "date" === input3.type)
307
+ if ("integer" === input3.type || "float" === input3.type || "geneExpression" === input3.type || "metaboliteIntensity" === input3.type || "date" === input3.type || "ssGSEA" === input3.type)
308
308
  return $io57(input3);
309
309
  if ("condition" === input3.type)
310
310
  return $io58(input3);
@@ -967,9 +967,9 @@ var validTermsByIdsResponse = (input) => {
967
967
  path: _path2 + ".name",
968
968
  expected: "string",
969
969
  value: input3.name
970
- }), "integer" === input3.type || "float" === input3.type || "geneExpression" === input3.type || "metaboliteIntensity" === input3.type || "date" === input3.type || $report(_exceptionable2, {
970
+ }), "integer" === input3.type || "float" === input3.type || "geneExpression" === input3.type || "metaboliteIntensity" === input3.type || "date" === input3.type || "ssGSEA" === input3.type || $report(_exceptionable2, {
971
971
  path: _path2 + ".type",
972
- expected: '("date" | "float" | "geneExpression" | "integer" | "metaboliteIntensity")',
972
+ expected: '("date" | "float" | "geneExpression" | "integer" | "metaboliteIntensity" | "ssGSEA")',
973
973
  value: input3.type
974
974
  }), void 0 === input3.child_types || (Array.isArray(input3.child_types) || $report(_exceptionable2, {
975
975
  path: _path2 + ".child_types",
@@ -2417,11 +2417,11 @@ var validTermsByIdsResponse = (input) => {
2417
2417
  value: input3.minNumSamples
2418
2418
  }), true, ("object" === typeof input3.term && null !== input3.term || $report(_exceptionable2, {
2419
2419
  path: _path2 + ".term",
2420
- expected: '(BaseTerm & Coord & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & Gene & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & { id: string; reachedVariantLimit?: boolean | undefined; snps?: SnpsEntry[] | undefined; } | BaseTerm & { id?: string | undefined; type: "integer" | "float" | "geneExpression" | "metaboliteIntensity" | "date"; bins: PresetNumericBins; values?: TermValues | undefined; unit?: string | undefined; continuousColorScale?: { ...; } | undefined; } | BaseTerm & { type: "categorical"; values: TermValues; groupsetting: TermGroupSetting; } | BaseTerm & { type: "condition"; values: TermValues; } | BaseTerm & { values: SampleLstTermValues; })',
2420
+ expected: '(BaseTerm & Coord & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & Gene & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & { id: string; reachedVariantLimit?: boolean | undefined; snps?: SnpsEntry[] | undefined; } | BaseTerm & { id?: string | undefined; type: "integer" | "float" | "geneExpression" | "metaboliteIntensity" | "date" | "ssGSEA"; bins: PresetNumericBins; values?: TermValues | undefined; unit?: string | undefined; continuousColorScale?: { ...; } | undefined; } | BaseTerm & { type: "categorical"; values: TermValues; groupsetting: TermGroupSetting; } | BaseTerm & { type: "condition"; values: TermValues; } | BaseTerm & { values: SampleLstTermValues; })',
2421
2421
  value: input3.term
2422
2422
  })) && $vu12(input3.term, _path2 + ".term", _exceptionable2) || $report(_exceptionable2, {
2423
2423
  path: _path2 + ".term",
2424
- expected: '(BaseTerm & Coord & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & Gene & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & { id: string; reachedVariantLimit?: boolean | undefined; snps?: SnpsEntry[] | undefined; } | BaseTerm & { id?: string | undefined; type: "integer" | "float" | "geneExpression" | "metaboliteIntensity" | "date"; bins: PresetNumericBins; values?: TermValues | undefined; unit?: string | undefined; continuousColorScale?: { ...; } | undefined; } | BaseTerm & { type: "categorical"; values: TermValues; groupsetting: TermGroupSetting; } | BaseTerm & { type: "condition"; values: TermValues; } | BaseTerm & { values: SampleLstTermValues; })',
2424
+ expected: '(BaseTerm & Coord & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & Gene & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & { id: string; reachedVariantLimit?: boolean | undefined; snps?: SnpsEntry[] | undefined; } | BaseTerm & { id?: string | undefined; type: "integer" | "float" | "geneExpression" | "metaboliteIntensity" | "date" | "ssGSEA"; bins: PresetNumericBins; values?: TermValues | undefined; unit?: string | undefined; continuousColorScale?: { ...; } | undefined; } | BaseTerm & { type: "categorical"; values: TermValues; groupsetting: TermGroupSetting; } | BaseTerm & { type: "condition"; values: TermValues; } | BaseTerm & { values: SampleLstTermValues; })',
2425
2425
  value: input3.term
2426
2426
  }), ("object" === typeof input3.q && null !== input3.q && false === Array.isArray(input3.q) || $report(_exceptionable2, {
2427
2427
  path: _path2 + ".q",
@@ -2735,9 +2735,9 @@ var validTermsByIdsResponse = (input) => {
2735
2735
  path: _path2 + ".name",
2736
2736
  expected: "string",
2737
2737
  value: input3.name
2738
- }), "integer" === input3.type || "float" === input3.type || "geneExpression" === input3.type || "metaboliteIntensity" === input3.type || "date" === input3.type || $report(_exceptionable2, {
2738
+ }), "integer" === input3.type || "float" === input3.type || "geneExpression" === input3.type || "metaboliteIntensity" === input3.type || "date" === input3.type || "ssGSEA" === input3.type || $report(_exceptionable2, {
2739
2739
  path: _path2 + ".type",
2740
- expected: '("date" | "float" | "geneExpression" | "integer" | "metaboliteIntensity")',
2740
+ expected: '("date" | "float" | "geneExpression" | "integer" | "metaboliteIntensity" | "ssGSEA")',
2741
2741
  value: input3.type
2742
2742
  }), void 0 === input3.child_types || (Array.isArray(input3.child_types) || $report(_exceptionable2, {
2743
2743
  path: _path2 + ".child_types",
@@ -3388,7 +3388,7 @@ var validTermsByIdsResponse = (input) => {
3388
3388
  return $vo55(input3, _path2, _exceptionable2);
3389
3389
  if ("categorical" === input3.type)
3390
3390
  return $vo56(input3, _path2, _exceptionable2);
3391
- if ("integer" === input3.type || "float" === input3.type || "geneExpression" === input3.type || "metaboliteIntensity" === input3.type || "date" === input3.type)
3391
+ if ("integer" === input3.type || "float" === input3.type || "geneExpression" === input3.type || "metaboliteIntensity" === input3.type || "date" === input3.type || "ssGSEA" === input3.type)
3392
3392
  return $vo57(input3, _path2, _exceptionable2);
3393
3393
  if ("condition" === input3.type)
3394
3394
  return $vo58(input3, _path2, _exceptionable2);
package/dist/{chunk-QG776KAI.js → chunk-34LXTZYA.js} RENAMED
@@ -44,7 +44,7 @@ var validCorrelationVolcanoRequest = (input) => {
44
44
  const $io10 = (input3) => ("string" === typeof input3.key || "number" === typeof input3.key) && "string" === typeof input3.label;
45
45
  const $io11 = (input3) => "string" === typeof input3.name && "filter" === input3.type && ("object" === typeof input3.filter && null !== input3.filter && $io1(input3.filter)) && "string" === typeof input3.color;
46
46
  const $io12 = (input3) => (void 0 === input3.join || "string" === typeof input3.join) && (void 0 === input3.isnot || "boolean" === typeof input3.isnot) && ("object" === typeof input3.term && null !== input3.term && $io13(input3.term)) && (Array.isArray(input3.ranges) && input3.ranges.every((elem) => "object" === typeof elem && null !== elem && $iu2(elem))) && (Array.isArray(input3.values) && input3.values.every((elem) => "object" === typeof elem && null !== elem && $io22(elem)));
47
- const $io13 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && ("integer" === input3.type || "float" === input3.type || "geneExpression" === input3.type || "metaboliteIntensity" === input3.type || "date" === input3.type) && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io5(input3.values)) && (void 0 === input3.skipValuesBuild || "boolean" === typeof input3.skipValuesBuild) && ("object" === typeof input3.bins && null !== input3.bins && $io14(input3.bins)) && (void 0 === input3.unit || "string" === typeof input3.unit) && (void 0 === input3.continuousColorScale || "object" === typeof input3.continuousColorScale && null !== input3.continuousColorScale && $io21(input3.continuousColorScale));
47
+ const $io13 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && ("integer" === input3.type || "float" === input3.type || "geneExpression" === input3.type || "metaboliteIntensity" === input3.type || "date" === input3.type || "ssGSEA" === input3.type) && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io5(input3.values)) && (void 0 === input3.skipValuesBuild || "boolean" === typeof input3.skipValuesBuild) && ("object" === typeof input3.bins && null !== input3.bins && $io14(input3.bins)) && (void 0 === input3.unit || "string" === typeof input3.unit) && (void 0 === input3.continuousColorScale || "object" === typeof input3.continuousColorScale && null !== input3.continuousColorScale && $io21(input3.continuousColorScale));
48
48
  const $io14 = (input3) => "object" === typeof input3["default"] && null !== input3["default"] && $iu8(input3["default"]) && ("object" === typeof input3.less && null !== input3.less && $iu8(input3.less)) && (void 0 === input3.label_offset || "number" === typeof input3.label_offset) && (void 0 === input3.label_offset_ignored || "boolean" === typeof input3.label_offset_ignored) && (void 0 === input3.rounding || "string" === typeof input3.rounding) && (void 0 === input3.min || "number" === typeof input3.min) && (void 0 === input3.max || "number" === typeof input3.max);
49
49
  const $io15 = (input3) => (void 0 === input3.hiddenValues || "object" === typeof input3.hiddenValues && null !== input3.hiddenValues && false === Array.isArray(input3.hiddenValues) && $io16(input3.hiddenValues)) && (void 0 === input3.isAtomic || true === input3.isAtomic) && (void 0 === input3.name || "string" === typeof input3.name) && (void 0 === input3.reuseId || "string" === typeof input3.reuseId) && "regular-bin" === input3.type && (void 0 === input3.mode || "discrete" === input3.mode) && "number" === typeof input3.bin_size && ("object" === typeof input3.first_bin && null !== input3.first_bin && $iu5(input3.first_bin)) && (void 0 === input3.last_bin || "object" === typeof input3.last_bin && null !== input3.last_bin && $iu6(input3.last_bin)) && (void 0 === input3.label_offset || "number" === typeof input3.label_offset);
50
50
  const $io16 = (input3) => Object.keys(input3).every((key) => {
@@ -101,7 +101,7 @@ var validCorrelationVolcanoRequest = (input) => {
101
101
  const $io53 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "geneVariant" === input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io5(input3.values)) && (void 0 === input3.skipValuesBuild || "boolean" === typeof input3.skipValuesBuild) && "gene" === input3.kind && "string" === typeof input3.gene && (void 0 === input3.chr || "string" === typeof input3.chr) && (void 0 === input3.start || "number" === typeof input3.start) && (void 0 === input3.stop || "number" === typeof input3.stop) && (Array.isArray(input3.genes) && input3.genes.every((elem) => "object" === typeof elem && null !== elem && $iu3(elem))) && ("object" === typeof input3.groupsetting && null !== input3.groupsetting && $io7(input3.groupsetting)) && (Array.isArray(input3.childTerms) && input3.childTerms.every((elem) => "object" === typeof elem && null !== elem && $io27(elem)));
102
102
  const $io54 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "geneVariant" === input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io5(input3.values)) && (void 0 === input3.skipValuesBuild || "boolean" === typeof input3.skipValuesBuild) && "coord" === input3.kind && "string" === typeof input3.chr && "number" === typeof input3.start && "number" === typeof input3.stop && (Array.isArray(input3.genes) && input3.genes.every((elem) => "object" === typeof elem && null !== elem && $iu3(elem))) && ("object" === typeof input3.groupsetting && null !== input3.groupsetting && $io7(input3.groupsetting)) && (Array.isArray(input3.childTerms) && input3.childTerms.every((elem) => "object" === typeof elem && null !== elem && $io27(elem)));
103
103
  const $io55 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "categorical" === input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io5(input3.values)) && (void 0 === input3.skipValuesBuild || "boolean" === typeof input3.skipValuesBuild) && ("object" === typeof input3.groupsetting && null !== input3.groupsetting && $io7(input3.groupsetting));
104
- const $io56 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && ("integer" === input3.type || "float" === input3.type || "geneExpression" === input3.type || "metaboliteIntensity" === input3.type || "date" === input3.type) && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io5(input3.values)) && (void 0 === input3.skipValuesBuild || "boolean" === typeof input3.skipValuesBuild) && ("object" === typeof input3.bins && null !== input3.bins && $io14(input3.bins)) && (void 0 === input3.unit || "string" === typeof input3.unit) && (void 0 === input3.continuousColorScale || "object" === typeof input3.continuousColorScale && null !== input3.continuousColorScale && $io21(input3.continuousColorScale));
104
+ const $io56 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && ("integer" === input3.type || "float" === input3.type || "geneExpression" === input3.type || "metaboliteIntensity" === input3.type || "date" === input3.type || "ssGSEA" === input3.type) && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io5(input3.values)) && (void 0 === input3.skipValuesBuild || "boolean" === typeof input3.skipValuesBuild) && ("object" === typeof input3.bins && null !== input3.bins && $io14(input3.bins)) && (void 0 === input3.unit || "string" === typeof input3.unit) && (void 0 === input3.continuousColorScale || "object" === typeof input3.continuousColorScale && null !== input3.continuousColorScale && $io21(input3.continuousColorScale));
105
105
  const $io57 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "condition" === input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io5(input3.values)) && (void 0 === input3.skipValuesBuild || "boolean" === typeof input3.skipValuesBuild);
106
106
  const $io58 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "string" === typeof input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io5(input3.values)) && (void 0 === input3.skipValuesBuild || "boolean" === typeof input3.skipValuesBuild) && (void 0 === input3.reachedVariantLimit || "boolean" === typeof input3.reachedVariantLimit) && (void 0 === input3.snps || Array.isArray(input3.snps) && input3.snps.every((elem) => "object" === typeof elem && null !== elem && $io49(elem)));
107
107
  const $io59 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "string" === typeof input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io60(input3.values)) && (void 0 === input3.skipValuesBuild || "boolean" === typeof input3.skipValuesBuild);
@@ -244,7 +244,7 @@ var validCorrelationVolcanoRequest = (input) => {
244
244
  return $io54(input3);
245
245
  if ("categorical" === input3.type)
246
246
  return $io55(input3);
247
- if ("integer" === input3.type || "float" === input3.type || "geneExpression" === input3.type || "metaboliteIntensity" === input3.type || "date" === input3.type)
247
+ if ("integer" === input3.type || "float" === input3.type || "geneExpression" === input3.type || "metaboliteIntensity" === input3.type || "date" === input3.type || "ssGSEA" === input3.type)
248
248
  return $io56(input3);
249
249
  if ("condition" === input3.type)
250
250
  return $io57(input3);
@@ -717,9 +717,9 @@ var validCorrelationVolcanoRequest = (input) => {
717
717
  path: _path2 + ".name",
718
718
  expected: "string",
719
719
  value: input3.name
720
- }), "integer" === input3.type || "float" === input3.type || "geneExpression" === input3.type || "metaboliteIntensity" === input3.type || "date" === input3.type || $report(_exceptionable2, {
720
+ }), "integer" === input3.type || "float" === input3.type || "geneExpression" === input3.type || "metaboliteIntensity" === input3.type || "date" === input3.type || "ssGSEA" === input3.type || $report(_exceptionable2, {
721
721
  path: _path2 + ".type",
722
- expected: '("date" | "float" | "geneExpression" | "integer" | "metaboliteIntensity")',
722
+ expected: '("date" | "float" | "geneExpression" | "integer" | "metaboliteIntensity" | "ssGSEA")',
723
723
  value: input3.type
724
724
  }), void 0 === input3.child_types || (Array.isArray(input3.child_types) || $report(_exceptionable2, {
725
725
  path: _path2 + ".child_types",
@@ -2377,11 +2377,11 @@ var validCorrelationVolcanoRequest = (input) => {
2377
2377
  value: input3.minNumSamples
2378
2378
  }), true, ("object" === typeof input3.term && null !== input3.term || $report(_exceptionable2, {
2379
2379
  path: _path2 + ".term",
2380
- expected: '(BaseTerm & Coord & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & Gene & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & { id: string; reachedVariantLimit?: boolean | undefined; snps?: SnpsEntry[] | undefined; } | BaseTerm & { id?: string | undefined; type: "integer" | "float" | "geneExpression" | "metaboliteIntensity" | "date"; bins: PresetNumericBins; values?: TermValues | undefined; unit?: string | undefined; continuousColorScale?: { ...; } | undefined; } | BaseTerm & { type: "categorical"; values: TermValues; groupsetting: TermGroupSetting; } | BaseTerm & { type: "condition"; values: TermValues; } | BaseTerm & { values: SampleLstTermValues; })',
2380
+ expected: '(BaseTerm & Coord & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & Gene & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & { id: string; reachedVariantLimit?: boolean | undefined; snps?: SnpsEntry[] | undefined; } | BaseTerm & { id?: string | undefined; type: "integer" | "float" | "geneExpression" | "metaboliteIntensity" | "date" | "ssGSEA"; bins: PresetNumericBins; values?: TermValues | undefined; unit?: string | undefined; continuousColorScale?: { ...; } | undefined; } | BaseTerm & { type: "categorical"; values: TermValues; groupsetting: TermGroupSetting; } | BaseTerm & { type: "condition"; values: TermValues; } | BaseTerm & { values: SampleLstTermValues; })',
2381
2381
  value: input3.term
2382
2382
  })) && $vu12(input3.term, _path2 + ".term", _exceptionable2) || $report(_exceptionable2, {
2383
2383
  path: _path2 + ".term",
2384
- expected: '(BaseTerm & Coord & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & Gene & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & { id: string; reachedVariantLimit?: boolean | undefined; snps?: SnpsEntry[] | undefined; } | BaseTerm & { id?: string | undefined; type: "integer" | "float" | "geneExpression" | "metaboliteIntensity" | "date"; bins: PresetNumericBins; values?: TermValues | undefined; unit?: string | undefined; continuousColorScale?: { ...; } | undefined; } | BaseTerm & { type: "categorical"; values: TermValues; groupsetting: TermGroupSetting; } | BaseTerm & { type: "condition"; values: TermValues; } | BaseTerm & { values: SampleLstTermValues; })',
2384
+ expected: '(BaseTerm & Coord & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & Gene & { type: "geneVariant"; genes: GvGeneTerm[]; } & { groupsetting: TermGroupSetting; childTerms: DtTerm[]; } | BaseTerm & { id: string; reachedVariantLimit?: boolean | undefined; snps?: SnpsEntry[] | undefined; } | BaseTerm & { id?: string | undefined; type: "integer" | "float" | "geneExpression" | "metaboliteIntensity" | "date" | "ssGSEA"; bins: PresetNumericBins; values?: TermValues | undefined; unit?: string | undefined; continuousColorScale?: { ...; } | undefined; } | BaseTerm & { type: "categorical"; values: TermValues; groupsetting: TermGroupSetting; } | BaseTerm & { type: "condition"; values: TermValues; } | BaseTerm & { values: SampleLstTermValues; })',
2385
2385
  value: input3.term
2386
2386
  }), ("object" === typeof input3.q && null !== input3.q && false === Array.isArray(input3.q) || $report(_exceptionable2, {
2387
2387
  path: _path2 + ".q",
@@ -2695,9 +2695,9 @@ var validCorrelationVolcanoRequest = (input) => {
2695
2695
  path: _path2 + ".name",
2696
2696
  expected: "string",
2697
2697
  value: input3.name
2698
- }), "integer" === input3.type || "float" === input3.type || "geneExpression" === input3.type || "metaboliteIntensity" === input3.type || "date" === input3.type || $report(_exceptionable2, {
2698
+ }), "integer" === input3.type || "float" === input3.type || "geneExpression" === input3.type || "metaboliteIntensity" === input3.type || "date" === input3.type || "ssGSEA" === input3.type || $report(_exceptionable2, {
2699
2699
  path: _path2 + ".type",
2700
- expected: '("date" | "float" | "geneExpression" | "integer" | "metaboliteIntensity")',
2700
+ expected: '("date" | "float" | "geneExpression" | "integer" | "metaboliteIntensity" | "ssGSEA")',
2701
2701
  value: input3.type
2702
2702
  }), void 0 === input3.child_types || (Array.isArray(input3.child_types) || $report(_exceptionable2, {
2703
2703
  path: _path2 + ".child_types",
@@ -3348,7 +3348,7 @@ var validCorrelationVolcanoRequest = (input) => {
3348
3348
  return $vo54(input3, _path2, _exceptionable2);
3349
3349
  if ("categorical" === input3.type)
3350
3350
  return $vo55(input3, _path2, _exceptionable2);
3351
- if ("integer" === input3.type || "float" === input3.type || "geneExpression" === input3.type || "metaboliteIntensity" === input3.type || "date" === input3.type)
3351
+ if ("integer" === input3.type || "float" === input3.type || "geneExpression" === input3.type || "metaboliteIntensity" === input3.type || "date" === input3.type || "ssGSEA" === input3.type)
3352
3352
  return $vo56(input3, _path2, _exceptionable2);
3353
3353
  if ("condition" === input3.type)
3354
3354
  return $vo57(input3, _path2, _exceptionable2);