@sjcrh/proteinpaint-types 2.138.0 → 2.138.3-0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (15) hide show
  1. package/dist/{chunk-EGEOFGXO.js → chunk-FYRWYZEE.js} +63 -49
  2. package/dist/{chunk-HWRFIXJA.js → chunk-IY6W7HXW.js} +2 -2
  3. package/dist/{chunk-S2M5SN7Q.js → chunk-O3NHQOWL.js} +2 -2
  4. package/dist/{chunk-AL4VFH5I.js → chunk-QG776KAI.js} +2 -2
  5. package/dist/correlationVolcano.js +1 -1
  6. package/dist/index.js +4 -4
  7. package/dist/samplewsimages.js +1 -1
  8. package/dist/termdb.boxplot.js +1 -1
  9. package/dist/termdb.violin.js +1 -1
  10. package/package.json +1 -1
  11. package/src/dataset.ts +5 -3
  12. package/src/routes/correlationVolcano.ts +1 -1
  13. package/src/routes/samplewsimages.ts +22 -4
  14. package/src/routes/termdb.boxplot.ts +1 -0
  15. package/src/routes/termdb.violin.ts +1 -0
package/dist/{chunk-EGEOFGXO.js → chunk-FYRWYZEE.js} RENAMED
@@ -21,7 +21,7 @@ var sampleWSImagesPayload = {
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  var validSampleWSImagesRequest = (input) => {
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  const errors = [];
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  const __is = (input2) => {
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- return "object" === typeof input2 && null !== input2 && ("string" === typeof input2.genome && "string" === typeof input2.dslabel && "string" === typeof input2.sample_id && "string" === typeof input2.wsimage && "number" === typeof input2.index);
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+ return "object" === typeof input2 && null !== input2 && ("string" === typeof input2.genome && "string" === typeof input2.dslabel && "string" === typeof input2.sample_id && "string" === typeof input2.wsimage);
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  };
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  if (false === __is(input)) {
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  const $report = import_typia.createValidate.report(errors);
@@ -42,10 +42,6 @@ var validSampleWSImagesRequest = (input) => {
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  path: _path2 + ".wsimage",
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  expected: "string",
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  value: input3.wsimage
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- }), "number" === typeof input3.index || $report(_exceptionable2, {
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- path: _path2 + ".index",
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- expected: "number",
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- value: input3.index
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  })].every((flag) => flag);
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  return ("object" === typeof input2 && null !== input2 || $report(true, {
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  path: _path + "",
@@ -69,9 +65,10 @@ var validSampleWSImagesResponse = (input) => {
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  const errors = [];
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  const __is = (input2) => {
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  const $io0 = (input3) => Array.isArray(input3.sampleWSImages) && input3.sampleWSImages.every((elem) => "object" === typeof elem && null !== elem && $io1(elem));
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- const $io1 = (input3) => "string" === typeof input3.filename && (void 0 === input3.overlays || Array.isArray(input3.overlays) && input3.overlays.every((elem) => "string" === typeof elem)) && (void 0 === input3.predictionLayers || Array.isArray(input3.predictionLayers) && input3.predictionLayers.every((elem) => "string" === typeof elem)) && (void 0 === input3.zoomInPoints || Array.isArray(input3.zoomInPoints) && input3.zoomInPoints.every((elem) => Array.isArray(elem) && (elem.length === 2 && "number" === typeof elem[0] && "number" === typeof elem[1]))) && "string" === typeof input3.metadata && (void 0 === input3.annotationsData || Array.isArray(input3.annotationsData) && input3.annotationsData.every((elem) => "object" === typeof elem && null !== elem && $io2(elem))) && (void 0 === input3.classes || Array.isArray(input3.classes) && input3.classes.every((elem) => "object" === typeof elem && null !== elem && $io3(elem))) && true && (void 0 === input3.activePatchColor || "string" === typeof input3.activePatchColor);
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- const $io2 = (input3) => Array.isArray(input3.zoomCoordinates) && (input3.zoomCoordinates.length === 2 && "number" === typeof input3.zoomCoordinates[0] && "number" === typeof input3.zoomCoordinates[1]) && "string" === typeof input3.type && "string" === typeof input3["class"] && "number" === typeof input3.uncertainty;
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- const $io3 = (input3) => "number" === typeof input3.id && "string" === typeof input3.shortcut && "string" === typeof input3.label && "string" === typeof input3.color;
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+ const $io1 = (input3) => "string" === typeof input3.filename && (void 0 === input3.overlays || Array.isArray(input3.overlays) && input3.overlays.every((elem) => "string" === typeof elem)) && (void 0 === input3.predictionLayers || Array.isArray(input3.predictionLayers) && input3.predictionLayers.every((elem) => "string" === typeof elem)) && "string" === typeof input3.metadata && (void 0 === input3.annotationsData || Array.isArray(input3.annotationsData) && input3.annotationsData.every((elem) => "object" === typeof elem && null !== elem && $io2(elem))) && (void 0 === input3.predictions || Array.isArray(input3.predictions) && input3.predictions.every((elem) => "object" === typeof elem && null !== elem && $io3(elem))) && (void 0 === input3.classes || Array.isArray(input3.classes) && input3.classes.every((elem) => "object" === typeof elem && null !== elem && $io4(elem))) && true && (void 0 === input3.activePatchColor || "string" === typeof input3.activePatchColor) && (void 0 === input3.tileSize || "number" === typeof input3.tileSize);
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+ const $io2 = (input3) => Array.isArray(input3.zoomCoordinates) && (input3.zoomCoordinates.length === 2 && "number" === typeof input3.zoomCoordinates[0] && "number" === typeof input3.zoomCoordinates[1]) && "string" === typeof input3["class"];
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+ const $io3 = (input3) => Array.isArray(input3.zoomCoordinates) && (input3.zoomCoordinates.length === 2 && "number" === typeof input3.zoomCoordinates[0] && "number" === typeof input3.zoomCoordinates[1]) && "string" === typeof input3.type && "string" === typeof input3["class"] && "number" === typeof input3.uncertainty;
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+ const $io4 = (input3) => "number" === typeof input3.id && "string" === typeof input3.shortcut && "string" === typeof input3.label && "string" === typeof input3.color;
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  return "object" === typeof input2 && null !== input2 && $io0(input2);
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  };
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  if (false === __is(input)) {
@@ -122,57 +119,42 @@ var validSampleWSImagesResponse = (input) => {
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  path: _path2 + ".predictionLayers",
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  expected: "(Array<string> | undefined)",
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  value: input3.predictionLayers
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- }), void 0 === input3.zoomInPoints || (Array.isArray(input3.zoomInPoints) || $report(_exceptionable2, {
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- path: _path2 + ".zoomInPoints",
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- expected: "(Array<[number, number]> | undefined)",
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- value: input3.zoomInPoints
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- })) && input3.zoomInPoints.map((elem, _index4) => (Array.isArray(elem) || $report(_exceptionable2, {
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- path: _path2 + ".zoomInPoints[" + _index4 + "]",
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- expected: "[number, number]",
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- value: elem
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- })) && ((elem.length === 2 || $report(_exceptionable2, {
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- path: _path2 + ".zoomInPoints[" + _index4 + "]",
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- expected: "[number, number]",
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- value: elem
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- })) && [
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- "number" === typeof elem[0] || $report(_exceptionable2, {
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- path: _path2 + ".zoomInPoints[" + _index4 + "][0]",
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- expected: "number",
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- value: elem[0]
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- }),
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- "number" === typeof elem[1] || $report(_exceptionable2, {
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- path: _path2 + ".zoomInPoints[" + _index4 + "][1]",
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- expected: "number",
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- value: elem[1]
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- })
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- ].every((flag) => flag)) || $report(_exceptionable2, {
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- path: _path2 + ".zoomInPoints[" + _index4 + "]",
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- expected: "[number, number]",
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- value: elem
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- })).every((flag) => flag) || $report(_exceptionable2, {
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- path: _path2 + ".zoomInPoints",
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- expected: "(Array<[number, number]> | undefined)",
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- value: input3.zoomInPoints
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  }), "string" === typeof input3.metadata || $report(_exceptionable2, {
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  path: _path2 + ".metadata",
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  expected: "string",
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  value: input3.metadata
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  }), void 0 === input3.annotationsData || (Array.isArray(input3.annotationsData) || $report(_exceptionable2, {
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  path: _path2 + ".annotationsData",
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- expected: "(Array<__type> | undefined)",
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+ expected: "(Array<Annotation> | undefined)",
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  value: input3.annotationsData
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- })) && input3.annotationsData.map((elem, _index5) => ("object" === typeof elem && null !== elem || $report(_exceptionable2, {
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- path: _path2 + ".annotationsData[" + _index5 + "]",
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- expected: "__type",
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+ })) && input3.annotationsData.map((elem, _index4) => ("object" === typeof elem && null !== elem || $report(_exceptionable2, {
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+ path: _path2 + ".annotationsData[" + _index4 + "]",
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+ expected: "Annotation",
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  value: elem
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- })) && $vo2(elem, _path2 + ".annotationsData[" + _index5 + "]", _exceptionable2) || $report(_exceptionable2, {
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- path: _path2 + ".annotationsData[" + _index5 + "]",
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- expected: "__type",
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+ })) && $vo2(elem, _path2 + ".annotationsData[" + _index4 + "]", _exceptionable2) || $report(_exceptionable2, {
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+ path: _path2 + ".annotationsData[" + _index4 + "]",
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+ expected: "Annotation",
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  value: elem
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  })).every((flag) => flag) || $report(_exceptionable2, {
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  path: _path2 + ".annotationsData",
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- expected: "(Array<__type> | undefined)",
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+ expected: "(Array<Annotation> | undefined)",
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  value: input3.annotationsData
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+ }), void 0 === input3.predictions || (Array.isArray(input3.predictions) || $report(_exceptionable2, {
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+ path: _path2 + ".predictions",
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+ expected: "(Array<Prediction> | undefined)",
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+ value: input3.predictions
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+ })) && input3.predictions.map((elem, _index5) => ("object" === typeof elem && null !== elem || $report(_exceptionable2, {
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+ path: _path2 + ".predictions[" + _index5 + "]",
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+ expected: "Prediction",
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+ value: elem
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+ })) && $vo3(elem, _path2 + ".predictions[" + _index5 + "]", _exceptionable2) || $report(_exceptionable2, {
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+ path: _path2 + ".predictions[" + _index5 + "]",
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+ expected: "Prediction",
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+ value: elem
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+ })).every((flag) => flag) || $report(_exceptionable2, {
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+ path: _path2 + ".predictions",
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+ expected: "(Array<Prediction> | undefined)",
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+ value: input3.predictions
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  }), void 0 === input3.classes || (Array.isArray(input3.classes) || $report(_exceptionable2, {
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  path: _path2 + ".classes",
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  expected: "(Array<WSIClass> | undefined)",
@@ -181,7 +163,7 @@ var validSampleWSImagesResponse = (input) => {
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  path: _path2 + ".classes[" + _index6 + "]",
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  expected: "WSIClass",
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  value: elem
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- })) && $vo3(elem, _path2 + ".classes[" + _index6 + "]", _exceptionable2) || $report(_exceptionable2, {
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+ })) && $vo4(elem, _path2 + ".classes[" + _index6 + "]", _exceptionable2) || $report(_exceptionable2, {
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  path: _path2 + ".classes[" + _index6 + "]",
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  expected: "WSIClass",
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  value: elem
@@ -193,6 +175,10 @@ var validSampleWSImagesResponse = (input) => {
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  path: _path2 + ".activePatchColor",
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  expected: "(string | undefined)",
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  value: input3.activePatchColor
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+ }), void 0 === input3.tileSize || "number" === typeof input3.tileSize || $report(_exceptionable2, {
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+ path: _path2 + ".tileSize",
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+ expected: "(number | undefined)",
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+ value: input3.tileSize
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  })].every((flag) => flag);
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  const $vo2 = (input3, _path2, _exceptionable2 = true) => [(Array.isArray(input3.zoomCoordinates) || $report(_exceptionable2, {
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  path: _path2 + ".zoomCoordinates",
@@ -217,6 +203,34 @@ var validSampleWSImagesResponse = (input) => {
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  path: _path2 + ".zoomCoordinates",
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  expected: "[number, number]",
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  value: input3.zoomCoordinates
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+ }), "string" === typeof input3["class"] || $report(_exceptionable2, {
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+ path: _path2 + '["class"]',
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+ expected: "string",
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+ value: input3["class"]
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+ })].every((flag) => flag);
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+ const $vo3 = (input3, _path2, _exceptionable2 = true) => [(Array.isArray(input3.zoomCoordinates) || $report(_exceptionable2, {
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+ path: _path2 + ".zoomCoordinates",
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+ expected: "[number, number]",
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+ value: input3.zoomCoordinates
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+ })) && ((input3.zoomCoordinates.length === 2 || $report(_exceptionable2, {
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+ path: _path2 + ".zoomCoordinates",
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+ expected: "[number, number]",
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+ value: input3.zoomCoordinates
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+ })) && [
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+ "number" === typeof input3.zoomCoordinates[0] || $report(_exceptionable2, {
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+ path: _path2 + ".zoomCoordinates[0]",
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+ expected: "number",
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+ value: input3.zoomCoordinates[0]
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+ }),
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+ "number" === typeof input3.zoomCoordinates[1] || $report(_exceptionable2, {
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+ path: _path2 + ".zoomCoordinates[1]",
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+ expected: "number",
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+ value: input3.zoomCoordinates[1]
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+ })
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+ ].every((flag) => flag)) || $report(_exceptionable2, {
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+ path: _path2 + ".zoomCoordinates",
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+ expected: "[number, number]",
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+ value: input3.zoomCoordinates
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  }), "string" === typeof input3.type || $report(_exceptionable2, {
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  path: _path2 + ".type",
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  expected: "string",
@@ -230,7 +244,7 @@ var validSampleWSImagesResponse = (input) => {
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  expected: "number",
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  value: input3.uncertainty
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  })].every((flag) => flag);
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- const $vo3 = (input3, _path2, _exceptionable2 = true) => ["number" === typeof input3.id || $report(_exceptionable2, {
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+ const $vo4 = (input3, _path2, _exceptionable2 = true) => ["number" === typeof input3.id || $report(_exceptionable2, {
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  path: _path2 + ".id",
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  expected: "number",
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  value: input3.id
package/dist/{chunk-HWRFIXJA.js → chunk-IY6W7HXW.js} RENAMED
@@ -73,7 +73,7 @@ var validBoxPlotRequest = (input) => {
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  const errors = [];
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  const __is = (input2) => {
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  const $join = import_typia.createValidate.join;
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- const $io0 = (input3) => "object" === typeof input3.tw && null !== input3.tw && $iu6(input3.tw) && "string" === typeof input3.genome && "string" === typeof input3.dslabel && "boolean" === typeof input3.isLogScale && "boolean" === typeof input3.orderByMedian && (void 0 === input3.overlayTw || "object" === typeof input3.overlayTw && null !== input3.overlayTw && $iu6(input3.overlayTw)) && (void 0 === input3.filter || "object" === typeof input3.filter && null !== input3.filter && $io12(input3.filter)) && true;
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+ const $io0 = (input3) => "object" === typeof input3.tw && null !== input3.tw && $iu6(input3.tw) && "string" === typeof input3.genome && "string" === typeof input3.dslabel && "boolean" === typeof input3.isLogScale && "boolean" === typeof input3.orderByMedian && (void 0 === input3.overlayTw || "object" === typeof input3.overlayTw && null !== input3.overlayTw && $iu6(input3.overlayTw)) && (void 0 === input3.filter || "object" === typeof input3.filter && null !== input3.filter && $io12(input3.filter)) && true && true;
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  const $io1 = (input3) => (void 0 === input3.id || "string" === typeof input3.id) && (void 0 === input3.$id || "string" === typeof input3.$id) && (void 0 === input3.isAtomic || true === input3.isAtomic) && true && (void 0 === input3.settings || "object" === typeof input3.settings && null !== input3.settings && false === Array.isArray(input3.settings) && $io2(input3.settings)) && true && (void 0 === input3.minNumSamples || "number" === typeof input3.minNumSamples) && true && ("CatTWValues" === input3.type || "CatTWPredefinedGS" === input3.type || "CatTWCustomGS" === input3.type) && ("object" === typeof input3.q && null !== input3.q && false === Array.isArray(input3.q) && $iu7(input3.q)) && ("object" === typeof input3.term && null !== input3.term && $io15(input3.term));
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  const $io2 = (input3) => Object.keys(input3).every((key) => {
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  const value = input3[key];
@@ -386,7 +386,7 @@ var validBoxPlotRequest = (input) => {
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  path: _path2 + ".filter",
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  expected: "(Filter | undefined)",
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  value: input3.filter
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- }), true].every((flag) => flag);
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+ }), true, true].every((flag) => flag);
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  const $vo1 = (input3, _path2, _exceptionable2 = true) => [void 0 === input3.id || "string" === typeof input3.id || $report(_exceptionable2, {
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  path: _path2 + ".id",
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  expected: "(string | undefined)",
package/dist/{chunk-S2M5SN7Q.js → chunk-O3NHQOWL.js} RENAMED
@@ -59,7 +59,7 @@ var validViolinRequest = (input) => {
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  const errors = [];
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  const __is = (input2) => {
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  const $join = import_typia.createValidate.join;
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- const $io0 = (input3) => "number" === typeof input3.axisHeight && (Array.isArray(input3.currentGeneNames) && input3.currentGeneNames.every((elem) => "string" === typeof elem)) && "string" === typeof input3.datasymbol && "number" === typeof input3.devicePixelRatio && true && "string" === typeof input3.dslabel && (void 0 === input3.filter || "object" === typeof input3.filter && null !== input3.filter && $io1(input3.filter)) && true && "string" === typeof input3.genome && "boolean" === typeof input3.isKDE && ("horizontal" === input3.orientation || "vertical" === input3.orientation) && "number" === typeof input3.radius && "number" === typeof input3.rightMargin && true && "number" === typeof input3.strokeWidth && "number" === typeof input3.svgw && "number" === typeof input3.ticks && true && "string" === typeof input3.unit;
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+ const $io0 = (input3) => "number" === typeof input3.axisHeight && (Array.isArray(input3.currentGeneNames) && input3.currentGeneNames.every((elem) => "string" === typeof elem)) && "string" === typeof input3.datasymbol && "number" === typeof input3.devicePixelRatio && true && "string" === typeof input3.dslabel && (void 0 === input3.filter || "object" === typeof input3.filter && null !== input3.filter && $io1(input3.filter)) && true && "string" === typeof input3.genome && "boolean" === typeof input3.isKDE && ("horizontal" === input3.orientation || "vertical" === input3.orientation) && "number" === typeof input3.radius && "number" === typeof input3.rightMargin && true && "number" === typeof input3.strokeWidth && "number" === typeof input3.svgw && "number" === typeof input3.ticks && true && "string" === typeof input3.unit && true;
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  const $io1 = (input3) => "tvslst" === input3.type && "boolean" === typeof input3["in"] && "string" === typeof input3.join && (void 0 === input3.tag || "string" === typeof input3.tag) && (Array.isArray(input3.lst) && input3.lst.every((elem) => "object" === typeof elem && null !== elem && $iu0(elem)));
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  const $io2 = (input3) => "tvs" === input3.type && ("object" === typeof input3.tvs && null !== input3.tvs && $iu4(input3.tvs));
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  const $io3 = (input3) => (void 0 === input3.join || "string" === typeof input3.join) && (void 0 === input3.isnot || "boolean" === typeof input3.isnot) && ("object" === typeof input3.term && null !== input3.term && $io4(input3.term)) && (void 0 === input3.groupset_label || "string" === typeof input3.groupset_label) && (Array.isArray(input3.values) && input3.values.every((elem) => "object" === typeof elem && null !== elem && false === Array.isArray(elem) && $io6(elem)));
@@ -255,7 +255,7 @@ var validViolinRequest = (input) => {
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  path: _path2 + ".unit",
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  expected: "string",
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  value: input3.unit
258
- })].every((flag) => flag);
258
+ }), true].every((flag) => flag);
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  const $vo1 = (input3, _path2, _exceptionable2 = true) => ["tvslst" === input3.type || $report(_exceptionable2, {
260
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  path: _path2 + ".type",
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  expected: '"tvslst"',
package/dist/{chunk-AL4VFH5I.js → chunk-QG776KAI.js} RENAMED
@@ -22,7 +22,7 @@ var validCorrelationVolcanoRequest = (input) => {
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  const errors = [];
23
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  const __is = (input2) => {
24
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  const $join = import_typia.createValidate.join;
25
- const $io0 = (input3) => "string" === typeof input3.genome && "string" === typeof input3.dslabel && (void 0 === input3.filter || "object" === typeof input3.filter && null !== input3.filter && $io1(input3.filter)) && true && ("object" === typeof input3.featureTw && null !== input3.featureTw && $iu4(input3.featureTw)) && (Array.isArray(input3.variableTwLst) && input3.variableTwLst.every((elem) => "object" === typeof elem && null !== elem && $iu4(elem))) && ("pearson" === input3.correlationMethod || "spearman" === input3.correlationMethod);
25
+ const $io0 = (input3) => "string" === typeof input3.genome && "string" === typeof input3.dslabel && (void 0 === input3.filter || "object" === typeof input3.filter && null !== input3.filter && $io1(input3.filter)) && true && ("object" === typeof input3.featureTw && null !== input3.featureTw && $iu4(input3.featureTw)) && (Array.isArray(input3.variableTwLst) && input3.variableTwLst.every((elem) => "object" === typeof elem && null !== elem && $iu4(elem))) && ("pearson" === input3.correlationMethod || "spearman" === input3.correlationMethod) && true;
26
26
  const $io1 = (input3) => "tvslst" === input3.type && "boolean" === typeof input3["in"] && "string" === typeof input3.join && (void 0 === input3.tag || "string" === typeof input3.tag) && (Array.isArray(input3.lst) && input3.lst.every((elem) => "object" === typeof elem && null !== elem && $iu0(elem)));
27
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  const $io2 = (input3) => "tvs" === input3.type && ("object" === typeof input3.tvs && null !== input3.tvs && $iu7(input3.tvs));
28
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  const $io3 = (input3) => (void 0 === input3.join || "string" === typeof input3.join) && (void 0 === input3.isnot || "boolean" === typeof input3.isnot) && ("object" === typeof input3.term && null !== input3.term && $io4(input3.term)) && (void 0 === input3.groupset_label || "string" === typeof input3.groupset_label) && (Array.isArray(input3.values) && input3.values.every((elem) => "object" === typeof elem && null !== elem && false === Array.isArray(elem) && $io6(elem)));
@@ -339,7 +339,7 @@ var validCorrelationVolcanoRequest = (input) => {
339
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  path: _path2 + ".correlationMethod",
340
340
  expected: '("pearson" | "spearman")',
341
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  value: input3.correlationMethod
342
- })].every((flag) => flag);
342
+ }), true].every((flag) => flag);
343
343
  const $vo1 = (input3, _path2, _exceptionable2 = true) => ["tvslst" === input3.type || $report(_exceptionable2, {
344
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  path: _path2 + ".type",
345
345
  expected: '"tvslst"',
package/dist/correlationVolcano.js CHANGED
@@ -2,7 +2,7 @@ import {
2
2
  CorrelationVolcanoPayload,
3
3
  validCorrelationVolcanoRequest,
4
4
  validCorrelationVolcanoResponse
5
- } from "./chunk-AL4VFH5I.js";
5
+ } from "./chunk-QG776KAI.js";
6
6
  import "./chunk-CNSSF43V.js";
7
7
  export {
8
8
  CorrelationVolcanoPayload,
package/dist/index.js CHANGED
@@ -17,7 +17,7 @@ import {
17
17
  validViolinRequest,
18
18
  validViolinResponse,
19
19
  violinPayload
20
- } from "./chunk-S2M5SN7Q.js";
20
+ } from "./chunk-O3NHQOWL.js";
21
21
  import {
22
22
  tilePayload,
23
23
  validTileRequest,
@@ -77,7 +77,7 @@ import {
77
77
  boxplotPayload,
78
78
  validBoxPlotRequest,
79
79
  validBoxPlotResponse
80
- } from "./chunk-HWRFIXJA.js";
80
+ } from "./chunk-IY6W7HXW.js";
81
81
  import {
82
82
  termdbCategoriesPayload,
83
83
  validCategoriesRequest,
@@ -142,7 +142,7 @@ import {
142
142
  sampleWSImagesPayload,
143
143
  validSampleWSImagesRequest,
144
144
  validSampleWSImagesResponse
145
- } from "./chunk-EGEOFGXO.js";
145
+ } from "./chunk-FYRWYZEE.js";
146
146
  import {
147
147
  snpPayload,
148
148
  validSnpRequest,
@@ -257,7 +257,7 @@ import {
257
257
  CorrelationVolcanoPayload,
258
258
  validCorrelationVolcanoRequest,
259
259
  validCorrelationVolcanoResponse
260
- } from "./chunk-AL4VFH5I.js";
260
+ } from "./chunk-QG776KAI.js";
261
261
  import {
262
262
  datasetPayload,
263
263
  validDatasetRequest,
package/dist/samplewsimages.js CHANGED
@@ -2,7 +2,7 @@ import {
2
2
  sampleWSImagesPayload,
3
3
  validSampleWSImagesRequest,
4
4
  validSampleWSImagesResponse
5
- } from "./chunk-EGEOFGXO.js";
5
+ } from "./chunk-FYRWYZEE.js";
6
6
  import "./chunk-CNSSF43V.js";
7
7
  export {
8
8
  sampleWSImagesPayload,
package/dist/termdb.boxplot.js CHANGED
@@ -2,7 +2,7 @@ import {
2
2
  boxplotPayload,
3
3
  validBoxPlotRequest,
4
4
  validBoxPlotResponse
5
- } from "./chunk-HWRFIXJA.js";
5
+ } from "./chunk-IY6W7HXW.js";
6
6
  import "./chunk-CNSSF43V.js";
7
7
  export {
8
8
  boxplotPayload,
package/dist/termdb.violin.js CHANGED
@@ -2,7 +2,7 @@ import {
2
2
  validViolinRequest,
3
3
  validViolinResponse,
4
4
  violinPayload
5
- } from "./chunk-S2M5SN7Q.js";
5
+ } from "./chunk-O3NHQOWL.js";
6
6
  import "./chunk-CNSSF43V.js";
7
7
  export {
8
8
  validViolinRequest,
package/package.json CHANGED
@@ -1,6 +1,6 @@
1
1
  {
2
2
  "name": "@sjcrh/proteinpaint-types",
3
- "version": "2.138.0",
3
+ "version": "2.138.3-0",
4
4
  "type": "module",
5
5
  "description": "Shared type definitions between ProteinPaint server and client code",
6
6
  "main": "src/index.ts",
package/src/dataset.ts CHANGED
@@ -1011,6 +1011,7 @@ export type WSImages = {
1011
1011
  activePatchColor?: string
1012
1012
  predictionColor?: Array<number>
1013
1013
  annotationsColor?: Array<number>
1014
+ tileSize?: number
1014
1015
  classes?: WSIClass[]
1015
1016
  uncertainty?: { color: string; label: string }[]
1016
1017
 
@@ -1023,8 +1024,6 @@ export type WSImages = {
1023
1024
  /** ds supplied */
1024
1025
  getWSIAnnotations?: (sampleName: string, wsiImage: string) => Promise<string[]>
1025
1026
  /** ds supplied */
1026
- getZoomInPoints?: (sampleName: string, wsiImage: string, index: number) => Promise<Array<[number, number]>>
1027
- /** ds supplied */
1028
1027
  makeGeoJson?: (sampleId: string, wsiImage: string) => void
1029
1028
  /** ds supplied */
1030
1029
  getWSIPredictionOverlay?: (sampleName: string, wsiImage: string) => Promise<string | undefined>
@@ -1370,8 +1369,11 @@ export type Termdb = {
1370
1369
  * The required minimum number of samples with data as queried with getData() or other code,
1371
1370
  * in order to minimize the ease of extracting identifiable information from aggregate data
1372
1371
  * in server response
1372
+ *
1373
+ * sampleCount: the number of samples with matching data from one or more queried terms
1374
+ * q : req.query as processed through app middleware (pre-parsed, may have req.body props, __protectec__, etc)
1373
1375
  */
1374
- minSampleSizeForFilterCharts?: number
1376
+ hasMinSampleSize?: (sampleCount: number, q: any) => boolean
1375
1377
  /** if true, backend is allowed to send sample names to client in charts */
1376
1378
  displaySampleIds?: (clientAuthResult: any) => boolean
1377
1379
  converSampleIds?: boolean
package/src/routes/correlationVolcano.ts CHANGED
@@ -14,7 +14,7 @@ export type CorrelationVolcanoRequest = {
14
14
  variableTwLst: TermWrapper[]
15
15
  /** correlation method */
16
16
  correlationMethod: 'pearson' | 'spearman'
17
- /** add new param */
17
+ __protected__: any
18
18
  }
19
19
 
20
20
  export type CorrelationVolcanoResponse = {
package/src/routes/samplewsimages.ts CHANGED
@@ -6,7 +6,6 @@ export type SampleWSImagesRequest = {
6
6
  dslabel: string
7
7
  sample_id: string
8
8
  wsimage: string
9
- index: number
10
9
  }
11
10
 
12
11
  export type SampleWSImagesResponse = {
@@ -17,14 +16,33 @@ export type WSImage = {
17
16
  filename: string
18
17
  overlays?: Array<string>
19
18
  predictionLayers?: Array<string>
20
- zoomInPoints?: Array<[number, number]>
21
19
  metadata: string
22
- annotationsData?: { zoomCoordinates: [number, number]; type: string; class: string; uncertainty: number }[]
23
- classes?: WSIClass[]
20
+ annotationsData?: Array<Annotation>
21
+ predictions?: Array<Prediction>
22
+ classes?: Array<WSIClass>
24
23
  /** ds defined uncertainity labels and colors */
25
24
  uncertainty?: any
26
25
  /** Color to highlight active patches */
27
26
  activePatchColor?: string
27
+ /** Tile size in pixels needed for AI scripts */
28
+ tileSize?: number
29
+ }
30
+
31
+ export type Annotation = {
32
+ zoomCoordinates: [number, number]
33
+ class: string
34
+ }
35
+
36
+ export type Prediction = {
37
+ zoomCoordinates: [number, number]
38
+ type: string
39
+ class: string
40
+ uncertainty: number
41
+ }
42
+
43
+ export type TileSelection = {
44
+ zoomCoordinates: [number, number]
45
+ class?: string
28
46
  }
29
47
 
30
48
  export const sampleWSImagesPayload: RoutePayload = {
package/src/routes/termdb.boxplot.ts CHANGED
@@ -17,6 +17,7 @@ export type BoxPlotRequest = {
17
17
  overlayTw?: TermWrapper
18
18
  filter?: Filter
19
19
  filter0?: any
20
+ __protected__: any
20
21
  }
21
22
 
22
23
  export type BoxPlotResponse = {
package/src/routes/termdb.violin.ts CHANGED
@@ -47,6 +47,7 @@ export type ViolinRequest = {
47
47
  tw: any
48
48
  /** A string representing a unit of measurement (e.g., 'log' for log scale) */
49
49
  unit: string
50
+ __protected__: any
50
51
  }
51
52
 
52
53
  /** ?? TODO: Needs description */