@sjcrh/proteinpaint-types 2.116.1-2 → 2.118.1-1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/brainImaging.js +1 -1
- package/dist/{chunk-PTYGGJLG.js → chunk-4U546XOJ.js} +57 -57
- package/dist/{chunk-CNR46KGX.js → chunk-53UNFIIG.js} +18 -18
- package/dist/{chunk-ZPN2DV5E.js → chunk-DL4UYYVE.js} +8 -8
- package/dist/{chunk-KBTAXZM4.js → chunk-GD3KAF6V.js} +47 -47
- package/dist/{chunk-M26XQDA4.js → chunk-GI4NNB34.js} +8 -8
- package/dist/{chunk-NESPJ4GG.js → chunk-J6SJ4M3S.js} +26 -26
- package/dist/{chunk-C7DJDPLP.js → chunk-JOGEIPHA.js} +57 -57
- package/dist/{chunk-I3U2T7HV.js → chunk-JYO2T4HZ.js} +57 -57
- package/dist/{chunk-GS37E7DB.js → chunk-KG7UDG6M.js} +57 -57
- package/dist/{chunk-KZIZMP7Y.js → chunk-OL4OMJSP.js} +26 -26
- package/dist/{chunk-7GSVLBKZ.js → chunk-ROPNHRVV.js} +8 -8
- package/dist/{chunk-EQGBEPDC.js → chunk-T2CSA2MC.js} +8 -8
- package/dist/correlationVolcano.js +1 -1
- package/dist/index.js +12 -12
- package/dist/termdb.boxplot.js +1 -1
- package/dist/termdb.categories.js +1 -1
- package/dist/termdb.cluster.js +1 -1
- package/dist/termdb.descrstats.js +1 -1
- package/dist/termdb.numericcategories.js +1 -1
- package/dist/termdb.percentile.js +1 -1
- package/dist/termdb.termsbyids.js +1 -1
- package/dist/termdb.topTermsByType.js +1 -1
- package/dist/termdb.topVariablyExpressedGenes.js +1 -1
- package/dist/termdb.violin.js +1 -1
- package/package.json +1 -1
- package/src/dataset.ts +44 -17
- package/src/terms/geneVariant.ts +2 -10
- package/src/vocab.ts +5 -5
|
@@ -112,15 +112,15 @@ var validCategoriesRequest = (input) => {
|
|
|
112
112
|
const $io28 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "condition" === input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io13(input3.values)) && true;
|
|
113
113
|
const $io29 = (input3) => "number" === typeof input3.grade && "string" === typeof input3.grade_label && (void 0 === input3.child_id || "string" === typeof input3.child_id) && "string" === typeof input3.child_label;
|
|
114
114
|
const $io30 = (input3) => (void 0 === input3.join || "string" === typeof input3.join) && (void 0 === input3.isnot || "boolean" === typeof input3.isnot) && ("object" === typeof input3.term && null !== input3.term && $iu10(input3.term)) && (Array.isArray(input3.values) && input3.values.every((elem) => "object" === typeof elem && null !== elem && $iu3(elem)));
|
|
115
|
-
const $io31 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "geneVariant" === input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io13(input3.values)) && true && ("object" === typeof input3.groupsetting && null !== input3.groupsetting && $
|
|
115
|
+
const $io31 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "geneVariant" === input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io13(input3.values)) && true && ("object" === typeof input3.groupsetting && null !== input3.groupsetting && $iu8(input3.groupsetting)) && "gene" === input3.kind && "string" === typeof input3.gene && (void 0 === input3.chr || "string" === typeof input3.chr) && (void 0 === input3.start || "number" === typeof input3.start) && (void 0 === input3.stop || "number" === typeof input3.stop);
|
|
116
116
|
const $io32 = (input3) => (void 0 === input3.disabled || "boolean" === typeof input3.disabled) && (Array.isArray(input3.lst) && input3.lst.every((elem) => "object" === typeof elem && null !== elem && $io33(elem)));
|
|
117
117
|
const $io33 = (input3) => "string" === typeof input3.name && (void 0 === input3.is_grade || "boolean" === typeof input3.is_grade) && (void 0 === input3.is_subcondition || "boolean" === typeof input3.is_subcondition) && (void 0 === input3.id || "string" === typeof input3.id) && (Array.isArray(input3.groups) && input3.groups.every((elem) => "object" === typeof elem && null !== elem && $iu0(elem)));
|
|
118
|
-
const $io34 = (input3) => "
|
|
119
|
-
const $io35 = (input3) =>
|
|
120
|
-
const $io36 = (input3) =>
|
|
121
|
-
const $io37 = (input3) =>
|
|
122
|
-
const $io38 = (input3) =>
|
|
123
|
-
const $io39 = (input3) =>
|
|
118
|
+
const $io34 = (input3) => "boolean" === typeof input3.disabled && (void 0 === input3.lst || Array.isArray(input3.lst) && input3.lst.length === 0);
|
|
119
|
+
const $io35 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "geneVariant" === input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io13(input3.values)) && true && ("object" === typeof input3.groupsetting && null !== input3.groupsetting && $iu8(input3.groupsetting)) && "coord" === input3.kind && "string" === typeof input3.chr && "number" === typeof input3.start && "number" === typeof input3.stop;
|
|
120
|
+
const $io36 = (input3) => 1 === input3.dt && (Array.isArray(input3.mclassLst) && input3.mclassLst.every((elem) => "M" === elem || "E" === elem || "F" === elem || "N" === elem || "S" === elem || "D" === elem || "I" === elem || "P" === elem || "L" === elem || "Intron" === elem || "Blank" === elem || "WT" === elem || "ITD" === elem || "DEL" === elem || "NLOSS" === elem || "CLOSS" === elem || "Utr3" === elem || "Utr5" === elem || "X" === elem || "noncoding" === elem)) && (Array.isArray(input3.mclassExcludeLst) && input3.mclassExcludeLst.every((elem) => "M" === elem || "E" === elem || "F" === elem || "N" === elem || "S" === elem || "D" === elem || "I" === elem || "P" === elem || "L" === elem || "Intron" === elem || "Blank" === elem || "WT" === elem || "ITD" === elem || "DEL" === elem || "NLOSS" === elem || "CLOSS" === elem || "Utr3" === elem || "Utr5" === elem || "X" === elem || "noncoding" === elem)) && (void 0 === input3.origin || "somatic" === input3.origin || "germline" === input3.origin);
|
|
121
|
+
const $io37 = (input3) => 4 === input3.dt && (Array.isArray(input3.mclassLst) && input3.mclassLst.every((elem) => "Blank" === elem || "WT" === elem || "CNV_amp" === elem || "CNV_loss" === elem || "CNV_loh" === elem || "CNV_amplification" === elem || "CNV_homozygous_deletion" === elem)) && (Array.isArray(input3.mclassExcludeLst) && input3.mclassExcludeLst.every((elem) => "Blank" === elem || "WT" === elem || "CNV_amp" === elem || "CNV_loss" === elem || "CNV_loh" === elem || "CNV_amplification" === elem || "CNV_homozygous_deletion" === elem)) && (void 0 === input3.origin || "somatic" === input3.origin || "germline" === input3.origin);
|
|
122
|
+
const $io38 = (input3) => 5 === input3.dt && (Array.isArray(input3.mclassLst) && input3.mclassLst.every((elem) => "Blank" === elem || "WT" === elem || "SV" === elem)) && (Array.isArray(input3.mclassExcludeLst) && input3.mclassExcludeLst.every((elem) => "Blank" === elem || "WT" === elem || "SV" === elem)) && (void 0 === input3.origin || "somatic" === input3.origin || "germline" === input3.origin);
|
|
123
|
+
const $io39 = (input3) => 2 === input3.dt && (Array.isArray(input3.mclassLst) && input3.mclassLst.every((elem) => "Blank" === elem || "WT" === elem || "Fuserna" === elem)) && (Array.isArray(input3.mclassExcludeLst) && input3.mclassExcludeLst.every((elem) => "Blank" === elem || "WT" === elem || "Fuserna" === elem)) && (void 0 === input3.origin || "somatic" === input3.origin || "germline" === input3.origin);
|
|
124
124
|
const $io40 = (input3) => (void 0 === input3.id || "string" === typeof input3.id) && "string" === typeof input3.$id && (void 0 === input3.isAtomic || true === input3.isAtomic) && true && (void 0 === input3.settings || "object" === typeof input3.settings && null !== input3.settings && false === Array.isArray(input3.settings) && $io2(input3.settings)) && true && (void 0 === input3.minNumSamples || "number" === typeof input3.minNumSamples) && true && ("object" === typeof input3.term && null !== input3.term && $io18(input3.term)) && ("object" === typeof input3.q && null !== input3.q && $iu11(input3.q));
|
|
125
125
|
const $io41 = (input3) => (void 0 === input3.hiddenValues || "object" === typeof input3.hiddenValues && null !== input3.hiddenValues && false === Array.isArray(input3.hiddenValues) && $io4(input3.hiddenValues)) && (void 0 === input3.isAtomic || true === input3.isAtomic) && (void 0 === input3.name || "string" === typeof input3.name) && (void 0 === input3.reuseId || "string" === typeof input3.reuseId) && "binary" === input3.mode && "custom-bin" === input3.type && (Array.isArray(input3.lst) && (input3.lst.length === 2 && ("object" === typeof input3.lst[0] && null !== input3.lst[0] && $iu4(input3.lst[0])) && ("object" === typeof input3.lst[1] && null !== input3.lst[1] && $iu5(input3.lst[1]))));
|
|
126
126
|
const $io42 = (input3) => (void 0 === input3.hiddenValues || "object" === typeof input3.hiddenValues && null !== input3.hiddenValues && false === Array.isArray(input3.hiddenValues) && $io4(input3.hiddenValues)) && (void 0 === input3.isAtomic || true === input3.isAtomic) && (void 0 === input3.name || "string" === typeof input3.name) && (void 0 === input3.reuseId || "string" === typeof input3.reuseId) && "continuous" === input3.mode && (void 0 === input3.convert2ZScore || "boolean" === typeof input3.convert2ZScore) && (null !== input3.type && void 0 === input3.type);
|
|
@@ -137,8 +137,8 @@ var validCategoriesRequest = (input) => {
|
|
|
137
137
|
const $io53 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "categorical" === input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io13(input3.values)) && true && ("object" === typeof input3.groupsetting && null !== input3.groupsetting && $iu8(input3.groupsetting));
|
|
138
138
|
const $io54 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && ("integer" === input3.type || "float" === input3.type || "geneExpression" === input3.type || "metaboliteIntensity" === input3.type || "date" === input3.type) && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io13(input3.values)) && true && ("object" === typeof input3.bins && null !== input3.bins && $io19(input3.bins)) && (void 0 === input3.unit || "string" === typeof input3.unit) && (void 0 === input3.continuousColorScale || "object" === typeof input3.continuousColorScale && null !== input3.continuousColorScale && $io25(input3.continuousColorScale));
|
|
139
139
|
const $io55 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "condition" === input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io13(input3.values)) && true;
|
|
140
|
-
const $io56 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "geneVariant" === input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io13(input3.values)) && true && ("object" === typeof input3.groupsetting && null !== input3.groupsetting && $
|
|
141
|
-
const $io57 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "geneVariant" === input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io13(input3.values)) && true && ("object" === typeof input3.groupsetting && null !== input3.groupsetting && $
|
|
140
|
+
const $io56 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "geneVariant" === input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io13(input3.values)) && true && ("object" === typeof input3.groupsetting && null !== input3.groupsetting && $iu8(input3.groupsetting)) && "gene" === input3.kind && "string" === typeof input3.gene && (void 0 === input3.chr || "string" === typeof input3.chr) && (void 0 === input3.start || "number" === typeof input3.start) && (void 0 === input3.stop || "number" === typeof input3.stop);
|
|
141
|
+
const $io57 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "geneVariant" === input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io13(input3.values)) && true && ("object" === typeof input3.groupsetting && null !== input3.groupsetting && $iu8(input3.groupsetting)) && "coord" === input3.kind && "string" === typeof input3.chr && "number" === typeof input3.start && "number" === typeof input3.stop;
|
|
142
142
|
const $io58 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "string" === typeof input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io13(input3.values)) && true && (void 0 === input3.reachedVariantLimit || "boolean" === typeof input3.reachedVariantLimit) && (void 0 === input3.snps || Array.isArray(input3.snps) && input3.snps.every((elem) => "object" === typeof elem && null !== elem && $io49(elem)));
|
|
143
143
|
const $io59 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "string" === typeof input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io60(input3.values)) && true;
|
|
144
144
|
const $io60 = (input3) => Object.keys(input3).every((key) => {
|
|
@@ -202,13 +202,13 @@ var validCategoriesRequest = (input) => {
|
|
|
202
202
|
})();
|
|
203
203
|
const $iu3 = (input3) => (() => {
|
|
204
204
|
if (2 === input3.dt)
|
|
205
|
-
return $
|
|
205
|
+
return $io39(input3);
|
|
206
206
|
if (5 === input3.dt)
|
|
207
|
-
return $
|
|
207
|
+
return $io38(input3);
|
|
208
208
|
if (4 === input3.dt)
|
|
209
|
-
return $
|
|
209
|
+
return $io37(input3);
|
|
210
210
|
if (1 === input3.dt)
|
|
211
|
-
return $
|
|
211
|
+
return $io36(input3);
|
|
212
212
|
return false;
|
|
213
213
|
})();
|
|
214
214
|
const $iu4 = (input3) => (() => {
|
|
@@ -250,7 +250,7 @@ var validCategoriesRequest = (input) => {
|
|
|
250
250
|
const $iu8 = (input3) => (() => {
|
|
251
251
|
if (Array.isArray(input3.lst) && input3.lst.every((elem) => "object" === typeof elem && null !== elem && $io33(elem)))
|
|
252
252
|
return $io32(input3);
|
|
253
|
-
return $
|
|
253
|
+
return $io34(input3);
|
|
254
254
|
})();
|
|
255
255
|
const $iu9 = (input3) => (() => {
|
|
256
256
|
if ("regular-bin" === input3.type)
|
|
@@ -263,7 +263,7 @@ var validCategoriesRequest = (input) => {
|
|
|
263
263
|
if ("gene" === input3.kind)
|
|
264
264
|
return $io31(input3);
|
|
265
265
|
if ("coord" === input3.kind)
|
|
266
|
-
return $
|
|
266
|
+
return $io35(input3);
|
|
267
267
|
return false;
|
|
268
268
|
})();
|
|
269
269
|
const $iu11 = (input3) => (() => {
|
|
@@ -1438,11 +1438,11 @@ var validCategoriesRequest = (input) => {
|
|
|
1438
1438
|
value: input3.values
|
|
1439
1439
|
}), true, ("object" === typeof input3.groupsetting && null !== input3.groupsetting || $report(_exceptionable2, {
|
|
1440
1440
|
path: _path2 + ".groupsetting",
|
|
1441
|
-
expected: "EnabledTermGroupSetting",
|
|
1441
|
+
expected: "(EnabledTermGroupSetting | __type.o4)",
|
|
1442
1442
|
value: input3.groupsetting
|
|
1443
|
-
})) && $
|
|
1443
|
+
})) && $vu8(input3.groupsetting, _path2 + ".groupsetting", _exceptionable2) || $report(_exceptionable2, {
|
|
1444
1444
|
path: _path2 + ".groupsetting",
|
|
1445
|
-
expected: "EnabledTermGroupSetting",
|
|
1445
|
+
expected: "(EnabledTermGroupSetting | __type.o4)",
|
|
1446
1446
|
value: input3.groupsetting
|
|
1447
1447
|
}), "gene" === input3.kind || $report(_exceptionable2, {
|
|
1448
1448
|
path: _path2 + ".kind",
|
|
@@ -1519,7 +1519,24 @@ var validCategoriesRequest = (input) => {
|
|
|
1519
1519
|
expected: "Array<GroupEntry>",
|
|
1520
1520
|
value: input3.groups
|
|
1521
1521
|
})].every((flag) => flag);
|
|
1522
|
-
const $vo34 = (input3, _path2, _exceptionable2 = true) => ["
|
|
1522
|
+
const $vo34 = (input3, _path2, _exceptionable2 = true) => ["boolean" === typeof input3.disabled || $report(_exceptionable2, {
|
|
1523
|
+
path: _path2 + ".disabled",
|
|
1524
|
+
expected: "boolean",
|
|
1525
|
+
value: input3.disabled
|
|
1526
|
+
}), void 0 === input3.lst || (Array.isArray(input3.lst) || $report(_exceptionable2, {
|
|
1527
|
+
path: _path2 + ".lst",
|
|
1528
|
+
expected: "([] | undefined)",
|
|
1529
|
+
value: input3.lst
|
|
1530
|
+
})) && ((input3.lst.length === 0 || $report(_exceptionable2, {
|
|
1531
|
+
path: _path2 + ".lst",
|
|
1532
|
+
expected: "[]",
|
|
1533
|
+
value: input3.lst
|
|
1534
|
+
})) && [].every((flag) => flag)) || $report(_exceptionable2, {
|
|
1535
|
+
path: _path2 + ".lst",
|
|
1536
|
+
expected: "([] | undefined)",
|
|
1537
|
+
value: input3.lst
|
|
1538
|
+
})].every((flag) => flag);
|
|
1539
|
+
const $vo35 = (input3, _path2, _exceptionable2 = true) => ["string" === typeof input3.id || $report(_exceptionable2, {
|
|
1523
1540
|
path: _path2 + ".id",
|
|
1524
1541
|
expected: "string",
|
|
1525
1542
|
value: input3.id
|
|
@@ -1573,11 +1590,11 @@ var validCategoriesRequest = (input) => {
|
|
|
1573
1590
|
value: input3.values
|
|
1574
1591
|
}), true, ("object" === typeof input3.groupsetting && null !== input3.groupsetting || $report(_exceptionable2, {
|
|
1575
1592
|
path: _path2 + ".groupsetting",
|
|
1576
|
-
expected: "EnabledTermGroupSetting",
|
|
1593
|
+
expected: "(EnabledTermGroupSetting | __type.o4)",
|
|
1577
1594
|
value: input3.groupsetting
|
|
1578
|
-
})) && $
|
|
1595
|
+
})) && $vu8(input3.groupsetting, _path2 + ".groupsetting", _exceptionable2) || $report(_exceptionable2, {
|
|
1579
1596
|
path: _path2 + ".groupsetting",
|
|
1580
|
-
expected: "EnabledTermGroupSetting",
|
|
1597
|
+
expected: "(EnabledTermGroupSetting | __type.o4)",
|
|
1581
1598
|
value: input3.groupsetting
|
|
1582
1599
|
}), "coord" === input3.kind || $report(_exceptionable2, {
|
|
1583
1600
|
path: _path2 + ".kind",
|
|
@@ -1596,7 +1613,7 @@ var validCategoriesRequest = (input) => {
|
|
|
1596
1613
|
expected: "number",
|
|
1597
1614
|
value: input3.stop
|
|
1598
1615
|
})].every((flag) => flag);
|
|
1599
|
-
const $
|
|
1616
|
+
const $vo36 = (input3, _path2, _exceptionable2 = true) => [1 === input3.dt || $report(_exceptionable2, {
|
|
1600
1617
|
path: _path2 + ".dt",
|
|
1601
1618
|
expected: "1",
|
|
1602
1619
|
value: input3.dt
|
|
@@ -1629,7 +1646,7 @@ var validCategoriesRequest = (input) => {
|
|
|
1629
1646
|
expected: '("germline" | "somatic" | undefined)',
|
|
1630
1647
|
value: input3.origin
|
|
1631
1648
|
})].every((flag) => flag);
|
|
1632
|
-
const $
|
|
1649
|
+
const $vo37 = (input3, _path2, _exceptionable2 = true) => [4 === input3.dt || $report(_exceptionable2, {
|
|
1633
1650
|
path: _path2 + ".dt",
|
|
1634
1651
|
expected: "4",
|
|
1635
1652
|
value: input3.dt
|
|
@@ -1662,7 +1679,7 @@ var validCategoriesRequest = (input) => {
|
|
|
1662
1679
|
expected: '("germline" | "somatic" | undefined)',
|
|
1663
1680
|
value: input3.origin
|
|
1664
1681
|
})].every((flag) => flag);
|
|
1665
|
-
const $
|
|
1682
|
+
const $vo38 = (input3, _path2, _exceptionable2 = true) => [5 === input3.dt || $report(_exceptionable2, {
|
|
1666
1683
|
path: _path2 + ".dt",
|
|
1667
1684
|
expected: "5",
|
|
1668
1685
|
value: input3.dt
|
|
@@ -1695,7 +1712,7 @@ var validCategoriesRequest = (input) => {
|
|
|
1695
1712
|
expected: '("germline" | "somatic" | undefined)',
|
|
1696
1713
|
value: input3.origin
|
|
1697
1714
|
})].every((flag) => flag);
|
|
1698
|
-
const $
|
|
1715
|
+
const $vo39 = (input3, _path2, _exceptionable2 = true) => [2 === input3.dt || $report(_exceptionable2, {
|
|
1699
1716
|
path: _path2 + ".dt",
|
|
1700
1717
|
expected: "2",
|
|
1701
1718
|
value: input3.dt
|
|
@@ -1728,23 +1745,6 @@ var validCategoriesRequest = (input) => {
|
|
|
1728
1745
|
expected: '("germline" | "somatic" | undefined)',
|
|
1729
1746
|
value: input3.origin
|
|
1730
1747
|
})].every((flag) => flag);
|
|
1731
|
-
const $vo39 = (input3, _path2, _exceptionable2 = true) => ["boolean" === typeof input3.disabled || $report(_exceptionable2, {
|
|
1732
|
-
path: _path2 + ".disabled",
|
|
1733
|
-
expected: "boolean",
|
|
1734
|
-
value: input3.disabled
|
|
1735
|
-
}), void 0 === input3.lst || (Array.isArray(input3.lst) || $report(_exceptionable2, {
|
|
1736
|
-
path: _path2 + ".lst",
|
|
1737
|
-
expected: "([] | undefined)",
|
|
1738
|
-
value: input3.lst
|
|
1739
|
-
})) && ((input3.lst.length === 0 || $report(_exceptionable2, {
|
|
1740
|
-
path: _path2 + ".lst",
|
|
1741
|
-
expected: "[]",
|
|
1742
|
-
value: input3.lst
|
|
1743
|
-
})) && [].every((flag) => flag)) || $report(_exceptionable2, {
|
|
1744
|
-
path: _path2 + ".lst",
|
|
1745
|
-
expected: "([] | undefined)",
|
|
1746
|
-
value: input3.lst
|
|
1747
|
-
})].every((flag) => flag);
|
|
1748
1748
|
const $vo40 = (input3, _path2, _exceptionable2 = true) => [void 0 === input3.id || "string" === typeof input3.id || $report(_exceptionable2, {
|
|
1749
1749
|
path: _path2 + ".id",
|
|
1750
1750
|
expected: "(string | undefined)",
|
|
@@ -2258,11 +2258,11 @@ var validCategoriesRequest = (input) => {
|
|
|
2258
2258
|
value: input3.minNumSamples
|
|
2259
2259
|
}), true, ("object" === typeof input3.term && null !== input3.term || $report(_exceptionable2, {
|
|
2260
2260
|
path: _path2 + ".term",
|
|
2261
|
-
expected: '(BaseTerm & { id: string; reachedVariantLimit?: boolean | undefined; snps?: SnpsEntry[] | undefined; } | BaseTerm & { id?: string | undefined; type: "integer" | "float" | "geneExpression" | "metaboliteIntensity" | "date"; bins: PresetNumericBins; values?: TermValues | undefined; unit?: string | undefined; continuousColorScale?: { ...; } | undefined; } | BaseTerm & { type: "categorical"; values: TermValues; groupsetting: TermGroupSetting; } | BaseTerm & { type: "condition"; values: TermValues; } | BaseTerm & { type: "geneVariant"; groupsetting:
|
|
2261
|
+
expected: '(BaseTerm & { id: string; reachedVariantLimit?: boolean | undefined; snps?: SnpsEntry[] | undefined; } | BaseTerm & { id?: string | undefined; type: "integer" | "float" | "geneExpression" | "metaboliteIntensity" | "date"; bins: PresetNumericBins; values?: TermValues | undefined; unit?: string | undefined; continuousColorScale?: { ...; } | undefined; } | BaseTerm & { type: "categorical"; values: TermValues; groupsetting: TermGroupSetting; } | BaseTerm & { type: "condition"; values: TermValues; } | BaseTerm & { type: "geneVariant"; groupsetting: TermGroupSetting; } & { kind: "coord"; chr: string; start: number; stop: number; } | BaseTerm & { type: "geneVariant"; groupsetting: TermGroupSetting; } & { kind: "gene"; gene: string; chr?: string | undefined; start?: number | undefined; stop?: number | undefined; } | BaseTerm & { values: SampleLstTermValues; })',
|
|
2262
2262
|
value: input3.term
|
|
2263
2263
|
})) && $vu13(input3.term, _path2 + ".term", _exceptionable2) || $report(_exceptionable2, {
|
|
2264
2264
|
path: _path2 + ".term",
|
|
2265
|
-
expected: '(BaseTerm & { id: string; reachedVariantLimit?: boolean | undefined; snps?: SnpsEntry[] | undefined; } | BaseTerm & { id?: string | undefined; type: "integer" | "float" | "geneExpression" | "metaboliteIntensity" | "date"; bins: PresetNumericBins; values?: TermValues | undefined; unit?: string | undefined; continuousColorScale?: { ...; } | undefined; } | BaseTerm & { type: "categorical"; values: TermValues; groupsetting: TermGroupSetting; } | BaseTerm & { type: "condition"; values: TermValues; } | BaseTerm & { type: "geneVariant"; groupsetting:
|
|
2265
|
+
expected: '(BaseTerm & { id: string; reachedVariantLimit?: boolean | undefined; snps?: SnpsEntry[] | undefined; } | BaseTerm & { id?: string | undefined; type: "integer" | "float" | "geneExpression" | "metaboliteIntensity" | "date"; bins: PresetNumericBins; values?: TermValues | undefined; unit?: string | undefined; continuousColorScale?: { ...; } | undefined; } | BaseTerm & { type: "categorical"; values: TermValues; groupsetting: TermGroupSetting; } | BaseTerm & { type: "condition"; values: TermValues; } | BaseTerm & { type: "geneVariant"; groupsetting: TermGroupSetting; } & { kind: "coord"; chr: string; start: number; stop: number; } | BaseTerm & { type: "geneVariant"; groupsetting: TermGroupSetting; } & { kind: "gene"; gene: string; chr?: string | undefined; start?: number | undefined; stop?: number | undefined; } | BaseTerm & { values: SampleLstTermValues; })',
|
|
2266
2266
|
value: input3.term
|
|
2267
2267
|
}), ("object" === typeof input3.q && null !== input3.q && false === Array.isArray(input3.q) || $report(_exceptionable2, {
|
|
2268
2268
|
path: _path2 + ".q",
|
|
@@ -2514,11 +2514,11 @@ var validCategoriesRequest = (input) => {
|
|
|
2514
2514
|
value: input3.values
|
|
2515
2515
|
}), true, ("object" === typeof input3.groupsetting && null !== input3.groupsetting || $report(_exceptionable2, {
|
|
2516
2516
|
path: _path2 + ".groupsetting",
|
|
2517
|
-
expected: "EnabledTermGroupSetting",
|
|
2517
|
+
expected: "(EnabledTermGroupSetting | __type.o4)",
|
|
2518
2518
|
value: input3.groupsetting
|
|
2519
|
-
})) && $
|
|
2519
|
+
})) && $vu8(input3.groupsetting, _path2 + ".groupsetting", _exceptionable2) || $report(_exceptionable2, {
|
|
2520
2520
|
path: _path2 + ".groupsetting",
|
|
2521
|
-
expected: "EnabledTermGroupSetting",
|
|
2521
|
+
expected: "(EnabledTermGroupSetting | __type.o4)",
|
|
2522
2522
|
value: input3.groupsetting
|
|
2523
2523
|
}), "gene" === input3.kind || $report(_exceptionable2, {
|
|
2524
2524
|
path: _path2 + ".kind",
|
|
@@ -2595,11 +2595,11 @@ var validCategoriesRequest = (input) => {
|
|
|
2595
2595
|
value: input3.values
|
|
2596
2596
|
}), true, ("object" === typeof input3.groupsetting && null !== input3.groupsetting || $report(_exceptionable2, {
|
|
2597
2597
|
path: _path2 + ".groupsetting",
|
|
2598
|
-
expected: "EnabledTermGroupSetting",
|
|
2598
|
+
expected: "(EnabledTermGroupSetting | __type.o4)",
|
|
2599
2599
|
value: input3.groupsetting
|
|
2600
|
-
})) && $
|
|
2600
|
+
})) && $vu8(input3.groupsetting, _path2 + ".groupsetting", _exceptionable2) || $report(_exceptionable2, {
|
|
2601
2601
|
path: _path2 + ".groupsetting",
|
|
2602
|
-
expected: "EnabledTermGroupSetting",
|
|
2602
|
+
expected: "(EnabledTermGroupSetting | __type.o4)",
|
|
2603
2603
|
value: input3.groupsetting
|
|
2604
2604
|
}), "coord" === input3.kind || $report(_exceptionable2, {
|
|
2605
2605
|
path: _path2 + ".kind",
|
|
@@ -3317,13 +3317,13 @@ var validCategoriesRequest = (input) => {
|
|
|
3317
3317
|
})();
|
|
3318
3318
|
const $vu3 = (input3, _path2, _exceptionable2 = true) => (() => {
|
|
3319
3319
|
if (2 === input3.dt)
|
|
3320
|
-
return $
|
|
3320
|
+
return $vo39(input3, _path2, _exceptionable2);
|
|
3321
3321
|
if (5 === input3.dt)
|
|
3322
|
-
return $
|
|
3322
|
+
return $vo38(input3, _path2, _exceptionable2);
|
|
3323
3323
|
if (4 === input3.dt)
|
|
3324
|
-
return $
|
|
3324
|
+
return $vo37(input3, _path2, _exceptionable2);
|
|
3325
3325
|
if (1 === input3.dt)
|
|
3326
|
-
return $
|
|
3326
|
+
return $vo36(input3, _path2, _exceptionable2);
|
|
3327
3327
|
return $report(_exceptionable2, {
|
|
3328
3328
|
path: _path2,
|
|
3329
3329
|
expected: "(FusionTvsValue | SVTvsValue | CNVTvsValue | SNVIndelTvsValue)",
|
|
@@ -3369,7 +3369,7 @@ var validCategoriesRequest = (input) => {
|
|
|
3369
3369
|
const $vu8 = (input3, _path2, _exceptionable2 = true) => (() => {
|
|
3370
3370
|
if (Array.isArray(input3.lst) && input3.lst.map((elem, _index59) => "object" === typeof elem && null !== elem && $vo33(elem, _path2 + ".lst[" + _index59 + "]", false)).every((flag) => flag))
|
|
3371
3371
|
return $vo32(input3, _path2, _exceptionable2);
|
|
3372
|
-
return $
|
|
3372
|
+
return $vo34(input3, _path2, _exceptionable2);
|
|
3373
3373
|
})();
|
|
3374
3374
|
const $vu9 = (input3, _path2, _exceptionable2 = true) => (() => {
|
|
3375
3375
|
if ("regular-bin" === input3.type)
|
|
@@ -3386,7 +3386,7 @@ var validCategoriesRequest = (input) => {
|
|
|
3386
3386
|
if ("gene" === input3.kind)
|
|
3387
3387
|
return $vo31(input3, _path2, _exceptionable2);
|
|
3388
3388
|
if ("coord" === input3.kind)
|
|
3389
|
-
return $
|
|
3389
|
+
return $vo35(input3, _path2, _exceptionable2);
|
|
3390
3390
|
return $report(_exceptionable2, {
|
|
3391
3391
|
path: _path2,
|
|
3392
3392
|
expected: "(GeneVariantGeneTerm | GeneVariantCoordTerm)",
|