@sjcrh/proteinpaint-types 2.116.1-1 → 2.116.1-2

package/dist/{chunk-MDBZCBM2.js → chunk-CNR46KGX.js}

@@ -3450,19 +3450,19 @@ var validCorrelationVolcanoResponse = (input) => {
         value: input3.skippedVariables
       }), (Array.isArray(input3.variableItems) || $report(_exceptionable2, {
         path: _path2 + ".variableItems",
-        expected: "Array<__type>.o1",
+        expected: "Array<VariableItemEntry>",
         value: input3.variableItems
       })) && input3.variableItems.map((elem, _index2) => ("object" === typeof elem && null !== elem || $report(_exceptionable2, {
         path: _path2 + ".variableItems[" + _index2 + "]",
-        expected: "__type.o1",
+        expected: "VariableItemEntry",
         value: elem
       })) && $vo2(elem, _path2 + ".variableItems[" + _index2 + "]", _exceptionable2) || $report(_exceptionable2, {
         path: _path2 + ".variableItems[" + _index2 + "]",
-        expected: "__type.o1",
+        expected: "VariableItemEntry",
         value: elem
       })).every((flag) => flag) || $report(_exceptionable2, {
         path: _path2 + ".variableItems",
-        expected: "Array<__type>.o1",
+        expected: "Array<VariableItemEntry>",
         value: input3.variableItems
       })].every((flag) => flag);
       const $vo1 = (input3, _path2, _exceptionable2 = true) => ["string" === typeof input3.tw$id || $report(_exceptionable2, {

package/dist/correlationVolcano.js

@@ -2,7 +2,7 @@ import {
   CorrelationVolcanoPayload,
   validCorrelationVolcanoRequest,
   validCorrelationVolcanoResponse
-} from "./chunk-MDBZCBM2.js";
+} from "./chunk-CNR46KGX.js";
 import "./chunk-CNSSF43V.js";
 export {
   CorrelationVolcanoPayload,

package/dist/index.js

@@ -212,7 +212,7 @@ import {
   CorrelationVolcanoPayload,
   validCorrelationVolcanoRequest,
   validCorrelationVolcanoResponse
-} from "./chunk-MDBZCBM2.js";
+} from "./chunk-CNR46KGX.js";
 import {
   datasetPayload,
   validDatasetRequest,

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@sjcrh/proteinpaint-types",
-  "version": "2.116.1-1",
+  "version": "2.116.1-2",
   "type": "module",
   "description": "Shared type definitions between ProteinPaint server and client code",
   "main": "src/index.ts",

package/src/dataset.ts

@@ -1346,6 +1346,30 @@ keep this setting here for reason of:
 		/** allow color or shape changes in the lollipop */
 		allowSkewerChanges: boolean
 	}
+	//* specify color map per module/group of terms. Used in the profile dataset.
+	/** For example "National Context" is a profile module, that groups some multivalue terms for wich the category colors are the ones shown below: 
+	 colorMap: {
+				['*']: {
+					['Not applicable for my role']: '#aaa',
+					['Not Available/Do Not Know']: '#aaa',
+					["I don't know"]: '#aaa',
+					['Almost Never']: '#595959',
+					['Infrequently']: '#747474',
+					['No']: '#aaa'
+				},
+				['National Context']: {
+					['Almost Always']: '#15557C',
+					['Frequently']: '#1E77BB',
+					['Sometimes']: '#2FA9F4',
+					['Yes']: '#1E77BB'
+				},
+	}
+	If the colors are the same for all the categories, use the wildcard '*' to define the color for all the modules.
+	**/
+	colorMap?: {
+		/** colors for a category multivalues */
+		[index: string]: { [index: string]: string }
+	}
 }
 
 type SampleType = {

package/src/routes/correlationVolcano.ts

@@ -24,18 +24,20 @@ export type CorrelationVolcanoResponse = {
 		tw$id: string
 	}[]
 	/** each element is test result of one variable corresponding to variableTwLst */
-	variableItems: {
-		/** correlation coefficient, -1 to 1 */
-		correlation: number
-		/** pvalue */
-		original_pvalue: number
-		/** pvalue */
-		adjusted_pvalue: number
-		/** tw.$id, for client to match the item with variableTwLst */
-		tw$id: string
-		/** number of samples analyzed. samples not having complete data for all terms will be excluded, thus size may be lower than current cohort */
-		sampleSize: number
-	}[]
+	variableItems: VariableItemEntry[]
+}
+
+export type VariableItemEntry = {
+	/** correlation coefficient, -1 to 1 */
+	correlation: number
+	/** pvalue */
+	original_pvalue: number
+	/** pvalue */
+	adjusted_pvalue: number
+	/** tw.$id, for client to match the item with variableTwLst */
+	tw$id: string
+	/** number of samples analyzed. samples not having complete data for all terms will be excluded, thus size may be lower than current cohort */
+	sampleSize: number
 }
 
 export const CorrelationVolcanoPayload: RoutePayload = {