@sjcrh/proteinpaint-types 2.114.0 → 2.115.0

package/dist/{chunk-T3NOHXOJ.js → chunk-ZPN2DV5E.js}

@@ -75,13 +75,13 @@ var validViolinRequest = (input) => {
     });
     const $io5 = (input3) => (void 0 === input3.key || "string" === typeof input3.key) && (void 0 === input3.uncomputable || "boolean" === typeof input3.uncomputable) && (void 0 === input3.label || "string" === typeof input3.label || "number" === typeof input3.label) && (void 0 === input3.order || "string" === typeof input3.order) && (void 0 === input3.color || "string" === typeof input3.color) && (void 0 === input3.group || "number" === typeof input3.group) && (void 0 === input3.filter || "object" === typeof input3.filter && null !== input3.filter && $io1(input3.filter));
     const $io6 = (input3) => (void 0 === input3.disabled || "boolean" === typeof input3.disabled) && (Array.isArray(input3.lst) && input3.lst.every((elem) => "object" === typeof elem && null !== elem && $io7(elem)));
-    const $io7 = (input3) => "string" === typeof input3.name && (void 0 === input3.is_grade || "boolean" === typeof input3.is_grade) && (void 0 === input3.is_subcondition || "boolean" === typeof input3.is_subcondition) && (Array.isArray(input3.groups) && input3.groups.every((elem) => "object" === typeof elem && null !== elem && $iu1(elem)));
+    const $io7 = (input3) => "string" === typeof input3.name && (void 0 === input3.is_grade || "boolean" === typeof input3.is_grade) && (void 0 === input3.is_subcondition || "boolean" === typeof input3.is_subcondition) && (void 0 === input3.id || "string" === typeof input3.id) && (Array.isArray(input3.groups) && input3.groups.every((elem) => "object" === typeof elem && null !== elem && $iu1(elem)));
     const $io8 = (input3) => "string" === typeof input3.name && "string" === typeof input3.type && (Array.isArray(input3.values) && input3.values.every((elem) => "object" === typeof elem && null !== elem && $io9(elem))) && (void 0 === input3.uncomputable || "boolean" === typeof input3.uncomputable);
     const $io9 = (input3) => ("string" === typeof input3.key || "number" === typeof input3.key) && "string" === typeof input3.label;
-    const $io10 = (input3) => "string" === typeof input3.name && "filter" === input3.type && ("object" === typeof input3.filter && null !== input3.filter && $io1(input3.filter)) && (void 0 === input3.uncomputable || "boolean" === typeof input3.uncomputable);
+    const $io10 = (input3) => "string" === typeof input3.name && "filter" === input3.type && true && (void 0 === input3.uncomputable || "boolean" === typeof input3.uncomputable);
     const $io11 = (input3) => "boolean" === typeof input3.disabled && (void 0 === input3.lst || Array.isArray(input3.lst) && input3.lst.length === 0);
     const $io12 = (input3) => (void 0 === input3.join || "string" === typeof input3.join) && (void 0 === input3.isnot || "boolean" === typeof input3.isnot) && ("object" === typeof input3.term && null !== input3.term && $io13(input3.term)) && (Array.isArray(input3.ranges) && input3.ranges.every((elem) => "object" === typeof elem && null !== elem && $iu2(elem))) && (Array.isArray(input3.values) && input3.values.every((elem) => "object" === typeof elem && null !== elem && $io22(elem)));
-    const $io13 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && ("integer" === input3.type || "float" === input3.type || "geneExpression" === input3.type || "metaboliteIntensity" === input3.type) && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io4(input3.values)) && true && ("object" === typeof input3.bins && null !== input3.bins && $io14(input3.bins)) && (void 0 === input3.unit || "string" === typeof input3.unit) && (void 0 === input3.continuousColorScale || "object" === typeof input3.continuousColorScale && null !== input3.continuousColorScale && $io21(input3.continuousColorScale));
+    const $io13 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && ("integer" === input3.type || "float" === input3.type || "geneExpression" === input3.type || "metaboliteIntensity" === input3.type || "date" === input3.type) && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io4(input3.values)) && true && ("object" === typeof input3.bins && null !== input3.bins && $io14(input3.bins)) && (void 0 === input3.unit || "string" === typeof input3.unit) && (void 0 === input3.continuousColorScale || "object" === typeof input3.continuousColorScale && null !== input3.continuousColorScale && $io21(input3.continuousColorScale));
     const $io14 = (input3) => "object" === typeof input3["default"] && null !== input3["default"] && $iu5(input3["default"]) && ("object" === typeof input3.less && null !== input3.less && $iu5(input3.less)) && (void 0 === input3.label_offset || "number" === typeof input3.label_offset) && (void 0 === input3.label_offset_ignored || "boolean" === typeof input3.label_offset_ignored) && (void 0 === input3.rounding || "string" === typeof input3.rounding) && (void 0 === input3.min || "number" === typeof input3.min) && (void 0 === input3.max || "number" === typeof input3.max);
     const $io15 = (input3) => (void 0 === input3.hiddenValues || "object" === typeof input3.hiddenValues && null !== input3.hiddenValues && false === Array.isArray(input3.hiddenValues) && $io16(input3.hiddenValues)) && (void 0 === input3.isAtomic || true === input3.isAtomic) && (void 0 === input3.name || "string" === typeof input3.name) && (void 0 === input3.reuseId || "string" === typeof input3.reuseId) && "regular-bin" === input3.type && (void 0 === input3.mode || "discrete" === input3.mode) && "number" === typeof input3.bin_size && ("object" === typeof input3.first_bin && null !== input3.first_bin && $iu6(input3.first_bin)) && (void 0 === input3.last_bin || "object" === typeof input3.last_bin && null !== input3.last_bin && $iu7(input3.last_bin)) && (void 0 === input3.label_offset || "number" === typeof input3.label_offset);
     const $io16 = (input3) => Object.keys(input3).every((key) => {
@@ -483,6 +483,10 @@ var validViolinRequest = (input) => {
         path: _path2 + ".is_subcondition",
         expected: "(boolean | undefined)",
         value: input3.is_subcondition
+      }), void 0 === input3.id || "string" === typeof input3.id || $report(_exceptionable2, {
+        path: _path2 + ".id",
+        expected: "(string | undefined)",
+        value: input3.id
       }), (Array.isArray(input3.groups) || $report(_exceptionable2, {
         path: _path2 + ".groups",
         expected: "Array<GroupEntry>",
@@ -546,15 +550,7 @@ var validViolinRequest = (input) => {
         path: _path2 + ".type",
         expected: '"filter"',
         value: input3.type
-      }), ("object" === typeof input3.filter && null !== input3.filter || $report(_exceptionable2, {
-        path: _path2 + ".filter",
-        expected: "Filter",
-        value: input3.filter
-      })) && $vo1(input3.filter, _path2 + ".filter", _exceptionable2) || $report(_exceptionable2, {
-        path: _path2 + ".filter",
-        expected: "Filter",
-        value: input3.filter
-      }), void 0 === input3.uncomputable || "boolean" === typeof input3.uncomputable || $report(_exceptionable2, {
+      }), true, void 0 === input3.uncomputable || "boolean" === typeof input3.uncomputable || $report(_exceptionable2, {
         path: _path2 + ".uncomputable",
         expected: "(boolean | undefined)",
         value: input3.uncomputable
@@ -633,9 +629,9 @@ var validViolinRequest = (input) => {
         path: _path2 + ".name",
         expected: "string",
         value: input3.name
-      }), "integer" === input3.type || "float" === input3.type || "geneExpression" === input3.type || "metaboliteIntensity" === input3.type || $report(_exceptionable2, {
+      }), "integer" === input3.type || "float" === input3.type || "geneExpression" === input3.type || "metaboliteIntensity" === input3.type || "date" === input3.type || $report(_exceptionable2, {
         path: _path2 + ".type",
-        expected: '("float" | "geneExpression" | "integer" | "metaboliteIntensity")',
+        expected: '("date" | "float" | "geneExpression" | "integer" | "metaboliteIntensity")',
         value: input3.type
       }), void 0 === input3.child_types || (Array.isArray(input3.child_types) || $report(_exceptionable2, {
         path: _path2 + ".child_types",

package/dist/correlationVolcano.js

@@ -2,7 +2,7 @@ import {
   CorrelationVolcanoPayload,
   validCorrelationVolcanoRequest,
   validCorrelationVolcanoResponse
-} from "./chunk-66XSFQPI.js";
+} from "./chunk-MDBZCBM2.js";
 import "./chunk-CNSSF43V.js";
 export {
   CorrelationVolcanoPayload,

package/dist/index.js

@@ -1,28 +1,28 @@
-import {
-  termChildrenPayload,
-  validTermChildrenRequest,
-  validTermChildrenResponse
-} from "./chunk-HKGWC7OO.js";
 import {
   termsByIdsPayload,
   validTermsByIdsRequest,
   validTermsByIdsResponse
-} from "./chunk-KRHYG2ZZ.js";
+} from "./chunk-I3U2T7HV.js";
+import {
+  topMutatedGenePayload,
+  validTopMutatedGeneRequest,
+  validTopMutatedGeneResponse
+} from "./chunk-IJHMCHUT.js";
 import {
   termdbTopTermsByTypePayload,
   validTermdbTopTermsByTypeRequest,
   validTermdbTopTermsByTypeResponse
-} from "./chunk-JNEIQWTE.js";
+} from "./chunk-KZIZMP7Y.js";
 import {
   termdbTopVariablyExpressedGenesPayload,
   validTermdbTopVariablyExpressedGenesRequest,
   validTermdbTopVariablyExpressedGenesResponse
-} from "./chunk-BEXUBE5A.js";
+} from "./chunk-7GSVLBKZ.js";
 import {
   validViolinRequest,
   validViolinResponse,
   violinPayload
-} from "./chunk-T3NOHXOJ.js";
+} from "./chunk-ZPN2DV5E.js";
 import {
   tilePayload,
   validTileRequest,
@@ -34,15 +34,15 @@ import {
   wsImagesPayload
 } from "./chunk-UZH5HOBP.js";
 import {
-  numericCategoriesPayload,
-  validNumericCategoriesRequest,
-  validNumericCategoriesResponse
-} from "./chunk-7AQB3YHO.js";
+  validWSISamplesRequest,
+  validWSSamplesResponse,
+  wsiSamplesPayload
+} from "./chunk-5HL5BPE5.js";
 import {
   percentilePayload,
   validPercentileRequest,
   validPercentileResponse
-} from "./chunk-PR7XHL4T.js";
+} from "./chunk-EQGBEPDC.js";
 import {
   rootTermPayload,
   validRootTermRequest,
@@ -74,10 +74,10 @@ import {
   validTermdbSingleCellSamplesResponse
 } from "./chunk-GRI3224V.js";
 import {
-  snpPayload,
-  validSnpRequest,
-  validSnpResponse
-} from "./chunk-J4QAF4EU.js";
+  termChildrenPayload,
+  validTermChildrenRequest,
+  validTermChildrenResponse
+} from "./chunk-HKGWC7OO.js";
 import {
   diffExpPayload,
   validDERequest,
@@ -87,17 +87,17 @@ import {
   boxplotPayload,
   validBoxPlotRequest,
   validBoxPlotResponse
-} from "./chunk-WVBWDL2B.js";
+} from "./chunk-PTYGGJLG.js";
 import {
   termdbCategoriesPayload,
   validCategoriesRequest,
   validCategoriesResponse
-} from "./chunk-H45GALYV.js";
+} from "./chunk-C7DJDPLP.js";
 import {
   termdbClusterPayload,
   validTermdbClusterRequest,
   validTermdbClusterResponse
-} from "./chunk-OSHG443J.js";
+} from "./chunk-NESPJ4GG.js";
 import {
   termdbCohortSummaryPayload,
   validTermdbCohortSummaryRequest,
@@ -112,12 +112,12 @@ import {
   descrStatsPayload,
   validDescrStatsRequest,
   validDescrStatsResponse
-} from "./chunk-BNOGQYXG.js";
+} from "./chunk-GS37E7DB.js";
 import {
-  hicGenomePayload,
-  validHicGenomeRequest,
-  validHicGenomeResponse
-} from "./chunk-I2KWGMNM.js";
+  numericCategoriesPayload,
+  validNumericCategoriesRequest,
+  validNumericCategoriesResponse
+} from "./chunk-M26XQDA4.js";
 import {
   hicstatPayload,
   validHicstatRequest,
@@ -148,6 +148,11 @@ import {
   validSampleWSImagesRequest,
   validSampleWSImagesResponse
 } from "./chunk-W4JULXYD.js";
+import {
+  snpPayload,
+  validSnpRequest,
+  validSnpResponse
+} from "./chunk-J4QAF4EU.js";
 import {
   gdcMafPayload,
   validGdcMafRequest,
@@ -158,11 +163,6 @@ import {
   validGdcMafBuildRequest,
   validGdcMafBuildResponse
 } from "./chunk-F5XGJIUS.js";
-import {
-  gdcTopMutatedGenePayload,
-  validGdcTopMutatedGeneRequest,
-  validGdcTopMutatedGeneResponse
-} from "./chunk-Q5F2XI6A.js";
 import {
   geneLookupPayload,
   validGeneLookupRequest,
@@ -188,11 +188,16 @@ import {
   validHicdataRequest,
   validHicdataResponse
 } from "./chunk-VKBTOKI2.js";
+import {
+  hicGenomePayload,
+  validHicGenomeRequest,
+  validHicGenomeResponse
+} from "./chunk-I2KWGMNM.js";
 import {
   brainImagingPayload,
   validBrainImagingRequest,
   validBrainImagingResponse
-} from "./chunk-XDRUNGOV.js";
+} from "./chunk-KBTAXZM4.js";
 import {
   brainImagingSamplesPayload,
   validBrainImagingSamplesRequest,
@@ -207,7 +212,7 @@ import {
   CorrelationVolcanoPayload,
   validCorrelationVolcanoRequest,
   validCorrelationVolcanoResponse
-} from "./chunk-66XSFQPI.js";
+} from "./chunk-MDBZCBM2.js";
 import {
   datasetPayload,
   validDatasetRequest,
@@ -237,7 +242,6 @@ export {
   dsDataPayload,
   dzImagesPayload,
   gdcMafPayload,
-  gdcTopMutatedGenePayload,
   geneLookupPayload,
   genesetEnrichmentPayload,
   genesetOverrepresentationPayload,
@@ -268,6 +272,7 @@ export {
   termdbTopVariablyExpressedGenesPayload,
   termsByIdsPayload,
   tilePayload,
+  topMutatedGenePayload,
   validBoxPlotRequest,
   validBoxPlotResponse,
   validBrainImagingRequest,
@@ -294,8 +299,6 @@ export {
   validGdcMafBuildResponse,
   validGdcMafRequest,
   validGdcMafResponse,
-  validGdcTopMutatedGeneRequest,
-  validGdcTopMutatedGeneResponse,
   validGeneLookupRequest,
   validGeneLookupResponse,
   validGenesetEnrichmentRequest,
@@ -352,12 +355,17 @@ export {
   validTermsByIdsResponse,
   validTileRequest,
   validTileResponse,
+  validTopMutatedGeneRequest,
+  validTopMutatedGeneResponse,
   validViolinRequest,
   validViolinResponse,
+  validWSISamplesRequest,
   validWSImagesRequest,
   validWSImagesResponse,
+  validWSSamplesResponse,
   validimgRequest,
   validimgResponse,
   violinPayload,
-  wsImagesPayload
+  wsImagesPayload,
+  wsiSamplesPayload
 };

package/dist/termdb.boxplot.js

@@ -2,7 +2,7 @@ import {
   boxplotPayload,
   validBoxPlotRequest,
   validBoxPlotResponse
-} from "./chunk-WVBWDL2B.js";
+} from "./chunk-PTYGGJLG.js";
 import "./chunk-CNSSF43V.js";
 export {
   boxplotPayload,

package/dist/termdb.categories.js

@@ -2,7 +2,7 @@ import {
   termdbCategoriesPayload,
   validCategoriesRequest,
   validCategoriesResponse
-} from "./chunk-H45GALYV.js";
+} from "./chunk-C7DJDPLP.js";
 import "./chunk-CNSSF43V.js";
 export {
   termdbCategoriesPayload,

package/dist/termdb.cluster.js

@@ -2,7 +2,7 @@ import {
   termdbClusterPayload,
   validTermdbClusterRequest,
   validTermdbClusterResponse
-} from "./chunk-OSHG443J.js";
+} from "./chunk-NESPJ4GG.js";
 import "./chunk-CNSSF43V.js";
 export {
   termdbClusterPayload,

package/dist/termdb.descrstats.js

@@ -2,7 +2,7 @@ import {
   descrStatsPayload,
   validDescrStatsRequest,
   validDescrStatsResponse
-} from "./chunk-BNOGQYXG.js";
+} from "./chunk-GS37E7DB.js";
 import "./chunk-CNSSF43V.js";
 export {
   descrStatsPayload,

package/dist/termdb.numericcategories.js

@@ -2,7 +2,7 @@ import {
   numericCategoriesPayload,
   validNumericCategoriesRequest,
   validNumericCategoriesResponse
-} from "./chunk-7AQB3YHO.js";
+} from "./chunk-M26XQDA4.js";
 import "./chunk-CNSSF43V.js";
 export {
   numericCategoriesPayload,

package/dist/termdb.percentile.js

@@ -2,7 +2,7 @@ import {
   percentilePayload,
   validPercentileRequest,
   validPercentileResponse
-} from "./chunk-PR7XHL4T.js";
+} from "./chunk-EQGBEPDC.js";
 import "./chunk-CNSSF43V.js";
 export {
   percentilePayload,

package/dist/termdb.termsbyids.js

@@ -2,7 +2,7 @@ import {
   termsByIdsPayload,
   validTermsByIdsRequest,
   validTermsByIdsResponse
-} from "./chunk-KRHYG2ZZ.js";
+} from "./chunk-I3U2T7HV.js";
 import "./chunk-CNSSF43V.js";
 export {
   termsByIdsPayload,

package/dist/termdb.topMutatedGenes.js

@@ -0,0 +1,11 @@
+import {
+  topMutatedGenePayload,
+  validTopMutatedGeneRequest,
+  validTopMutatedGeneResponse
+} from "./chunk-IJHMCHUT.js";
+import "./chunk-CNSSF43V.js";
+export {
+  topMutatedGenePayload,
+  validTopMutatedGeneRequest,
+  validTopMutatedGeneResponse
+};

package/dist/termdb.topTermsByType.js

@@ -2,7 +2,7 @@ import {
   termdbTopTermsByTypePayload,
   validTermdbTopTermsByTypeRequest,
   validTermdbTopTermsByTypeResponse
-} from "./chunk-JNEIQWTE.js";
+} from "./chunk-KZIZMP7Y.js";
 import "./chunk-CNSSF43V.js";
 export {
   termdbTopTermsByTypePayload,

package/dist/termdb.topVariablyExpressedGenes.js

@@ -2,7 +2,7 @@ import {
   termdbTopVariablyExpressedGenesPayload,
   validTermdbTopVariablyExpressedGenesRequest,
   validTermdbTopVariablyExpressedGenesResponse
-} from "./chunk-BEXUBE5A.js";
+} from "./chunk-7GSVLBKZ.js";
 import "./chunk-CNSSF43V.js";
 export {
   termdbTopVariablyExpressedGenesPayload,

package/dist/termdb.violin.js

@@ -2,7 +2,7 @@ import {
   validViolinRequest,
   validViolinResponse,
   violinPayload
-} from "./chunk-T3NOHXOJ.js";
+} from "./chunk-ZPN2DV5E.js";
 import "./chunk-CNSSF43V.js";
 export {
   validViolinRequest,

package/dist/wsisamples.js

@@ -0,0 +1,11 @@
+import {
+  validWSISamplesRequest,
+  validWSSamplesResponse,
+  wsiSamplesPayload
+} from "./chunk-5HL5BPE5.js";
+import "./chunk-CNSSF43V.js";
+export {
+  validWSISamplesRequest,
+  validWSSamplesResponse,
+  wsiSamplesPayload
+};

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@sjcrh/proteinpaint-types",
-  "version": "2.114.0",
+  "version": "2.115.0",
   "type": "module",
   "description": "Shared type definitions between ProteinPaint server and client code",
   "main": "src/index.ts",

package/src/dataset.ts

@@ -1,4 +1,6 @@
 import type { Mclass } from './Mclass.ts'
+import type { WSImage } from './routes/samplewsimages.ts'
+import type { WSISample } from './routes/wsisamples.ts'
 
 /*** General usage types ***/
 type FileObj = {
@@ -461,6 +463,8 @@ type TopVariablyExpressedGenesQuery = {
 }
 
 type TopMutatedGenes = {
+	/** ds supplied getter. if not, dynamically adds one during launch */
+	get?: (f: any) => void
 	/** Specifies the dom element rendered in the menu */
 	arguments?: GeneArgumentEntry[]
 }
@@ -853,10 +857,16 @@ image file to sample mapping is stored in wsimages table
 export type WSImages = {
 	// type of the image, e.g. H&E
 	type: string
-	// path to the folder where sample images are stored
-	imageBySampleFolder?: string
 
-	sources?: string
+	/* path to the folder where sample images are stored
+	required; for both cases where image files are hosted locally, or loaded from remote via ds-supplied getter
+	*/
+	imageBySampleFolder: string
+
+	/** either ds supplied or dynamically added on launch with built in logic (retrieve the sample list from the wsimages table) */
+	getSamples?: () => Promise<Array<WSISample>>
+	/** either ds supplied or dynamically added on launch with built in logic */
+	getWSImages?: (sampleName: string) => Promise<WSImage[]>
 }
 
 /*** types supporting Termdb ***/

package/src/index.ts

@@ -17,7 +17,7 @@ export * from './routes/errorResponse.ts'
 export * from './routes/filter.gdc.ts'
 export * from './routes/gdc.maf.ts'
 export * from './routes/gdc.mafBuild.ts'
-export * from './routes/gdc.topMutatedGenes.ts'
+export * from './routes/termdb.topMutatedGenes.ts'
 export * from './routes/genelookup.ts'
 export * from './routes/genesetEnrichment.ts'
 export * from './routes/genesetOverrepresentation.ts'
@@ -54,6 +54,7 @@ export * from './routes/termdb.topVariablyExpressedGenes.ts'
 export * from './routes/termdb.violin.ts'
 export * from './routes/tileserver.ts'
 export * from './routes/wsimages.ts'
+export * from './routes/wsisamples.ts'
 export * from './terms/categorical.ts'
 export * from './terms/condition.ts'
 export * from './terms/numeric.ts'

package/src/routes/{gdc.topMutatedGenes.ts → termdb.topMutatedGenes.ts}

@@ -1,6 +1,8 @@
 import type { RoutePayload } from './routeApi.js'
 
-export type GdcTopMutatedGeneRequest = {
+export type topMutatedGeneRequest = {
+	genome: string
+	dslabel: string
 	/** to restrict to CGC genes */
 	geneFilter?: 'CGC'
 	/** max number of genes to return */
@@ -9,7 +11,7 @@ export type GdcTopMutatedGeneRequest = {
 	filter0?: object
 }
 
-export type GdcGene = {
+export type MutatedGene = {
 	/** gene symbol */
 	gene: string
 	/** optional attributes on number of mutated cases per dt */
@@ -22,16 +24,16 @@ export type GdcGene = {
 	}[]
 }
 
-export type GdcTopMutatedGeneResponse = {
-	genes: GdcGene[]
+export type topMutatedGeneResponse = {
+	genes: MutatedGene[]
 }
 
-export const gdcTopMutatedGenePayload: RoutePayload = {
+export const topMutatedGenePayload: RoutePayload = {
 	request: {
-		typeId: 'GdcTopMutatedGeneRequest'
+		typeId: 'topMutatedGeneRequest'
 	},
 	response: {
-		typeId: 'GdcTopMutatedGeneResponse'
+		typeId: 'topMutatedGeneResponse'
 	}
 	//examples: []
 }

package/src/routes/wsisamples.ts

@@ -0,0 +1,25 @@
+import type { RoutePayload } from './routeApi.js'
+
+export type WSISamplesRequest = {
+	genome: string
+	dslabel: string
+}
+
+export type WSISamplesResponse = {
+	samples: Array<WSISample>
+	error?: string
+}
+
+export type WSISample = {
+	sampleId: string
+	wsimages: Array<string>
+}
+
+export const wsiSamplesPayload: RoutePayload = {
+	request: {
+		typeId: 'WSISamplesRequest'
+	},
+	response: {
+		typeId: 'WSISamplesResponse'
+	}
+}

package/src/terms/numeric.ts

@@ -34,7 +34,7 @@ export type NumericTerm = BaseTerm & {
 	id?: string
 	// these concrete term.type values make it clear that only these are numeric,
 	// "categorical", "condition", and other term.types are not included in this union
-	type: 'integer' | 'float' | 'geneExpression' | 'metaboliteIntensity'
+	type: 'integer' | 'float' | 'geneExpression' | 'metaboliteIntensity' | 'date'
 	bins: PresetNumericBins
 	values?: TermValues
 	unit?: string
@@ -50,7 +50,7 @@ export type NumericTerm = BaseTerm & {
 
 export type NumericDictTerm = BaseTerm & {
 	id?: string
-	type: 'integer' | 'float'
+	type: 'integer' | 'float' | 'date'
 	bins: PresetNumericBins
 	values?: TermValues
 	unit?: string

package/src/terms/term.ts

@@ -122,7 +122,7 @@ export type ValuesGroup = {
 export type FilterGroup = {
 	name: string
 	type: 'filter'
-	filter: Filter
+	filter: any
 	uncomputable?: boolean // if true, do not include this group in computations
 }
 
@@ -136,6 +136,7 @@ type Groupset = {
 	name: string
 	is_grade?: boolean
 	is_subcondition?: boolean
+	id?: string // to identify groupset, used by geneVariant term
 } & BaseGroupSet
 
 export type EnabledTermGroupSetting = {

package/dist/gdc.topMutatedGenes.js

@@ -1,11 +0,0 @@
-import {
-  gdcTopMutatedGenePayload,
-  validGdcTopMutatedGeneRequest,
-  validGdcTopMutatedGeneResponse
-} from "./chunk-Q5F2XI6A.js";
-import "./chunk-CNSSF43V.js";
-export {
-  gdcTopMutatedGenePayload,
-  validGdcTopMutatedGeneRequest,
-  validGdcTopMutatedGeneResponse
-};