@sjcrh/proteinpaint-types 2.112.1-0 → 2.114.0

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Files changed (32) hide show
  1. package/dist/brainImaging.js +1 -1
  2. package/dist/{chunk-FMW25T52.js → chunk-66XSFQPI.js} +282 -182
  3. package/dist/{chunk-ES6BRZ4L.js → chunk-7AQB3YHO.js} +15 -11
  4. package/dist/{chunk-A72XYNKT.js → chunk-BEXUBE5A.js} +15 -11
  5. package/dist/{chunk-TXZQ56TX.js → chunk-BNOGQYXG.js} +421 -251
  6. package/dist/{chunk-7Z3AE4AY.js → chunk-H45GALYV.js} +445 -345
  7. package/dist/{chunk-4CCAF4O5.js → chunk-JNEIQWTE.js} +44 -36
  8. package/dist/{chunk-KHPBBU43.js → chunk-KRHYG2ZZ.js} +610 -580
  9. package/dist/{chunk-NPVDG36X.js → chunk-OSHG443J.js} +401 -371
  10. package/dist/{chunk-GHAIGRB7.js → chunk-PR7XHL4T.js} +15 -11
  11. package/dist/{chunk-ZFUF4XMD.js → chunk-T3NOHXOJ.js} +15 -11
  12. package/dist/{chunk-2WZPM25H.js → chunk-WVBWDL2B.js} +445 -345
  13. package/dist/{chunk-GGKNEHME.js → chunk-XDRUNGOV.js} +192 -162
  14. package/dist/correlationVolcano.js +1 -1
  15. package/dist/index.js +12 -12
  16. package/dist/termdb.boxplot.js +1 -1
  17. package/dist/termdb.categories.js +1 -1
  18. package/dist/termdb.cluster.js +1 -1
  19. package/dist/termdb.descrstats.js +1 -1
  20. package/dist/termdb.numericcategories.js +1 -1
  21. package/dist/termdb.percentile.js +1 -1
  22. package/dist/termdb.termsbyids.js +1 -1
  23. package/dist/termdb.topTermsByType.js +1 -1
  24. package/dist/termdb.topVariablyExpressedGenes.js +1 -1
  25. package/dist/termdb.violin.js +1 -1
  26. package/package.json +1 -1
  27. package/src/dataset.ts +31 -15
  28. package/src/routes/termdb.DE.ts +4 -0
  29. package/src/routes/termdb.cluster.ts +7 -2
  30. package/src/terms/geneVariant.ts +23 -2
  31. package/src/terms/term.ts +16 -8
  32. package/src/termsetting.ts +3 -3
package/dist/{chunk-ES6BRZ4L.js → chunk-7AQB3YHO.js} RENAMED
@@ -25,7 +25,7 @@ var validNumericCategoriesRequest = (input) => {
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  const $io0 = (input3) => "string" === typeof input3.genome && "string" === typeof input3.dslabel && "string" === typeof input3.embedder && "string" === typeof input3.tid && (void 0 === input3.filter || "object" === typeof input3.filter && null !== input3.filter && $io1(input3.filter));
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  const $io1 = (input3) => "lst" === input3.type && (void 0 === input3["in"] || "boolean" === typeof input3["in"]) && ("and" === input3.join || "or" === input3.join) && (void 0 === input3.tag || "string" === typeof input3.tag) && (Array.isArray(input3.lst) && input3.lst.every((elem) => "object" === typeof elem && null !== elem && $iu0(elem)));
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  const $io2 = (input3) => (void 0 === input3.join || "string" === typeof input3.join) && (void 0 === input3.isnot || "boolean" === typeof input3.isnot) && ("object" === typeof input3.term && null !== input3.term && $io3(input3.term)) && (void 0 === input3.groupset_label || "string" === typeof input3.groupset_label) && (Array.isArray(input3.values) && input3.values.every((elem) => "object" === typeof elem && null !== elem && false === Array.isArray(elem) && $io5(elem)));
28
- const $io3 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "categorical" === input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io4(input3.values)) && ("object" === typeof input3.groupsetting && null !== input3.groupsetting && $iu4(input3.groupsetting));
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+ const $io3 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "categorical" === input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io4(input3.values)) && true && ("object" === typeof input3.groupsetting && null !== input3.groupsetting && $iu4(input3.groupsetting));
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  const $io4 = (input3) => Object.keys(input3).every((key) => {
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  const value = input3[key];
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  if (void 0 === value)
@@ -41,10 +41,10 @@ var validNumericCategoriesRequest = (input) => {
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  const $io7 = (input3) => "string" === typeof input3.name && (void 0 === input3.is_grade || "boolean" === typeof input3.is_grade) && (void 0 === input3.is_subcondition || "boolean" === typeof input3.is_subcondition) && (Array.isArray(input3.groups) && input3.groups.every((elem) => "object" === typeof elem && null !== elem && $iu1(elem)));
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  const $io8 = (input3) => "string" === typeof input3.name && "string" === typeof input3.type && (Array.isArray(input3.values) && input3.values.every((elem) => "object" === typeof elem && null !== elem && $io9(elem))) && (void 0 === input3.uncomputable || "boolean" === typeof input3.uncomputable);
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  const $io9 = (input3) => ("string" === typeof input3.key || "number" === typeof input3.key) && "string" === typeof input3.label;
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- const $io10 = (input3) => "string" === typeof input3.name && "filter" === input3.type && ("object" === typeof input3.filter && null !== input3.filter && $io1(input3.filter));
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+ const $io10 = (input3) => "string" === typeof input3.name && "filter" === input3.type && ("object" === typeof input3.filter && null !== input3.filter && $io1(input3.filter)) && (void 0 === input3.uncomputable || "boolean" === typeof input3.uncomputable);
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  const $io11 = (input3) => "boolean" === typeof input3.disabled && (void 0 === input3.lst || Array.isArray(input3.lst) && input3.lst.length === 0);
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  const $io12 = (input3) => (void 0 === input3.join || "string" === typeof input3.join) && (void 0 === input3.isnot || "boolean" === typeof input3.isnot) && ("object" === typeof input3.term && null !== input3.term && $io13(input3.term)) && (Array.isArray(input3.ranges) && input3.ranges.every((elem) => "object" === typeof elem && null !== elem && $iu2(elem))) && (Array.isArray(input3.values) && input3.values.every((elem) => "object" === typeof elem && null !== elem && $io22(elem)));
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- const $io13 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && ("integer" === input3.type || "float" === input3.type || "geneExpression" === input3.type || "metaboliteIntensity" === input3.type) && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io4(input3.values)) && ("object" === typeof input3.bins && null !== input3.bins && $io14(input3.bins)) && (void 0 === input3.unit || "string" === typeof input3.unit) && (void 0 === input3.continuousColorScale || "object" === typeof input3.continuousColorScale && null !== input3.continuousColorScale && $io21(input3.continuousColorScale));
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+ const $io13 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && ("integer" === input3.type || "float" === input3.type || "geneExpression" === input3.type || "metaboliteIntensity" === input3.type) && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io4(input3.values)) && true && ("object" === typeof input3.bins && null !== input3.bins && $io14(input3.bins)) && (void 0 === input3.unit || "string" === typeof input3.unit) && (void 0 === input3.continuousColorScale || "object" === typeof input3.continuousColorScale && null !== input3.continuousColorScale && $io21(input3.continuousColorScale));
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  const $io14 = (input3) => "object" === typeof input3["default"] && null !== input3["default"] && $iu5(input3["default"]) && ("object" === typeof input3.less && null !== input3.less && $iu5(input3.less)) && (void 0 === input3.label_offset || "number" === typeof input3.label_offset) && (void 0 === input3.label_offset_ignored || "boolean" === typeof input3.label_offset_ignored) && (void 0 === input3.rounding || "string" === typeof input3.rounding) && (void 0 === input3.min || "number" === typeof input3.min) && (void 0 === input3.max || "number" === typeof input3.max);
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  const $io15 = (input3) => (void 0 === input3.hiddenValues || "object" === typeof input3.hiddenValues && null !== input3.hiddenValues && false === Array.isArray(input3.hiddenValues) && $io16(input3.hiddenValues)) && (void 0 === input3.isAtomic || true === input3.isAtomic) && (void 0 === input3.name || "string" === typeof input3.name) && (void 0 === input3.reuseId || "string" === typeof input3.reuseId) && "regular-bin" === input3.type && (void 0 === input3.mode || "discrete" === input3.mode) && "number" === typeof input3.bin_size && ("object" === typeof input3.first_bin && null !== input3.first_bin && $iu6(input3.first_bin)) && (void 0 === input3.last_bin || "object" === typeof input3.last_bin && null !== input3.last_bin && $iu7(input3.last_bin)) && (void 0 === input3.label_offset || "number" === typeof input3.label_offset);
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  const $io16 = (input3) => Object.keys(input3).every((key) => {
@@ -62,11 +62,11 @@ var validNumericCategoriesRequest = (input) => {
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  const $io21 = (input3) => "string" === typeof input3.minColor && "string" === typeof input3.maxColor;
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  const $io22 = (input3) => "string" === typeof input3.key && "number" === typeof input3.value && true === input3.uncomputable && (void 0 === input3.label || "string" === typeof input3.label);
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  const $io23 = (input3) => (void 0 === input3.join || "string" === typeof input3.join) && (void 0 === input3.isnot || "boolean" === typeof input3.isnot) && ("object" === typeof input3.term && null !== input3.term && $io24(input3.term)) && (void 0 === input3.value_by_max_grade || "boolean" === typeof input3.value_by_max_grade) && (void 0 === input3.value_by_most_recent || "boolean" === typeof input3.value_by_most_recent) && (void 0 === input3.value_by_computable_grade || "boolean" === typeof input3.value_by_computable_grade) && (void 0 === input3.grade_and_child || Array.isArray(input3.grade_and_child) && input3.grade_and_child.every((elem) => "object" === typeof elem && null !== elem && $io25(elem)));
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- const $io24 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "condition" === input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io4(input3.values));
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+ const $io24 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "condition" === input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io4(input3.values)) && true;
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  const $io25 = (input3) => "number" === typeof input3.grade && "string" === typeof input3.grade_label && (void 0 === input3.child_id || "string" === typeof input3.child_id) && "string" === typeof input3.child_label;
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  const $io26 = (input3) => (void 0 === input3.join || "string" === typeof input3.join) && (void 0 === input3.isnot || "boolean" === typeof input3.isnot) && ("object" === typeof input3.term && null !== input3.term && $iu8(input3.term)) && (Array.isArray(input3.values) && input3.values.every((elem) => "object" === typeof elem && null !== elem && $iu3(elem)));
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- const $io27 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "geneVariant" === input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io4(input3.values)) && ("object" === typeof input3.groupsetting && null !== input3.groupsetting && $io6(input3.groupsetting)) && "gene" === input3.kind && "string" === typeof input3.gene && (void 0 === input3.chr || "string" === typeof input3.chr) && (void 0 === input3.start || "number" === typeof input3.start) && (void 0 === input3.stop || "number" === typeof input3.stop);
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- const $io28 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "geneVariant" === input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io4(input3.values)) && ("object" === typeof input3.groupsetting && null !== input3.groupsetting && $io6(input3.groupsetting)) && "coord" === input3.kind && "string" === typeof input3.chr && "number" === typeof input3.start && "number" === typeof input3.stop;
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+ const $io27 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "geneVariant" === input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io4(input3.values)) && true && ("object" === typeof input3.groupsetting && null !== input3.groupsetting && $io6(input3.groupsetting)) && "gene" === input3.kind && "string" === typeof input3.gene && (void 0 === input3.chr || "string" === typeof input3.chr) && (void 0 === input3.start || "number" === typeof input3.start) && (void 0 === input3.stop || "number" === typeof input3.stop);
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+ const $io28 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "geneVariant" === input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io4(input3.values)) && true && ("object" === typeof input3.groupsetting && null !== input3.groupsetting && $io6(input3.groupsetting)) && "coord" === input3.kind && "string" === typeof input3.chr && "number" === typeof input3.start && "number" === typeof input3.stop;
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  const $io29 = (input3) => 1 === input3.dt && (Array.isArray(input3.mclassLst) && input3.mclassLst.every((elem) => "M" === elem || "E" === elem || "F" === elem || "N" === elem || "S" === elem || "D" === elem || "I" === elem || "P" === elem || "L" === elem || "Intron" === elem || "Blank" === elem || "WT" === elem || "ITD" === elem || "DEL" === elem || "NLOSS" === elem || "CLOSS" === elem || "Utr3" === elem || "Utr5" === elem || "X" === elem || "noncoding" === elem)) && (Array.isArray(input3.mclassExcludeLst) && input3.mclassExcludeLst.every((elem) => "M" === elem || "E" === elem || "F" === elem || "N" === elem || "S" === elem || "D" === elem || "I" === elem || "P" === elem || "L" === elem || "Intron" === elem || "Blank" === elem || "WT" === elem || "ITD" === elem || "DEL" === elem || "NLOSS" === elem || "CLOSS" === elem || "Utr3" === elem || "Utr5" === elem || "X" === elem || "noncoding" === elem)) && (void 0 === input3.origin || "somatic" === input3.origin || "germline" === input3.origin);
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  const $io30 = (input3) => 4 === input3.dt && (Array.isArray(input3.mclassLst) && input3.mclassLst.every((elem) => "Blank" === elem || "WT" === elem || "CNV_amp" === elem || "CNV_loss" === elem || "CNV_loh" === elem || "CNV_amplification" === elem || "CNV_homozygous_deletion" === elem)) && (Array.isArray(input3.mclassExcludeLst) && input3.mclassExcludeLst.every((elem) => "Blank" === elem || "WT" === elem || "CNV_amp" === elem || "CNV_loss" === elem || "CNV_loh" === elem || "CNV_amplification" === elem || "CNV_homozygous_deletion" === elem)) && (void 0 === input3.origin || "somatic" === input3.origin || "germline" === input3.origin);
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  const $io31 = (input3) => 5 === input3.dt && (Array.isArray(input3.mclassLst) && input3.mclassLst.every((elem) => "Blank" === elem || "WT" === elem || "SV" === elem)) && (Array.isArray(input3.mclassExcludeLst) && input3.mclassExcludeLst.every((elem) => "Blank" === elem || "WT" === elem || "SV" === elem)) && (void 0 === input3.origin || "somatic" === input3.origin || "germline" === input3.origin);
@@ -297,7 +297,7 @@ var validNumericCategoriesRequest = (input) => {
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  path: _path2 + ".values",
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  expected: "(TermValues | undefined)",
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  value: input3.values
300
- }), ("object" === typeof input3.groupsetting && null !== input3.groupsetting || $report(_exceptionable2, {
300
+ }), true, ("object" === typeof input3.groupsetting && null !== input3.groupsetting || $report(_exceptionable2, {
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  path: _path2 + ".groupsetting",
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  expected: "(EnabledTermGroupSetting | __type.o1)",
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  value: input3.groupsetting
@@ -469,6 +469,10 @@ var validNumericCategoriesRequest = (input) => {
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  path: _path2 + ".filter",
470
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  expected: "Filter",
471
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  value: input3.filter
472
+ }), void 0 === input3.uncomputable || "boolean" === typeof input3.uncomputable || $report(_exceptionable2, {
473
+ path: _path2 + ".uncomputable",
474
+ expected: "(boolean | undefined)",
475
+ value: input3.uncomputable
472
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  })].every((flag) => flag);
473
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  const $vo11 = (input3, _path2, _exceptionable2 = true) => ["boolean" === typeof input3.disabled || $report(_exceptionable2, {
474
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  path: _path2 + ".disabled",
@@ -588,7 +592,7 @@ var validNumericCategoriesRequest = (input) => {
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  path: _path2 + ".values",
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  expected: "(TermValues | undefined)",
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  value: input3.values
591
- }), ("object" === typeof input3.bins && null !== input3.bins || $report(_exceptionable2, {
595
+ }), true, ("object" === typeof input3.bins && null !== input3.bins || $report(_exceptionable2, {
592
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  path: _path2 + ".bins",
593
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  expected: "PresetNumericBins",
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  value: input3.bins
@@ -980,7 +984,7 @@ var validNumericCategoriesRequest = (input) => {
980
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  path: _path2 + ".values",
981
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  expected: "(TermValues | undefined)",
982
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  value: input3.values
983
- })].every((flag) => flag);
987
+ }), true].every((flag) => flag);
984
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  const $vo25 = (input3, _path2, _exceptionable2 = true) => ["number" === typeof input3.grade || $report(_exceptionable2, {
985
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  path: _path2 + ".grade",
986
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  expected: "number",
@@ -1083,7 +1087,7 @@ var validNumericCategoriesRequest = (input) => {
1083
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  path: _path2 + ".values",
1084
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  expected: "(TermValues | undefined)",
1085
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  value: input3.values
1086
- }), ("object" === typeof input3.groupsetting && null !== input3.groupsetting || $report(_exceptionable2, {
1090
+ }), true, ("object" === typeof input3.groupsetting && null !== input3.groupsetting || $report(_exceptionable2, {
1087
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  path: _path2 + ".groupsetting",
1088
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  expected: "EnabledTermGroupSetting",
1089
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  value: input3.groupsetting
@@ -1164,7 +1168,7 @@ var validNumericCategoriesRequest = (input) => {
1164
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  path: _path2 + ".values",
1165
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  expected: "(TermValues | undefined)",
1166
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  value: input3.values
1167
- }), ("object" === typeof input3.groupsetting && null !== input3.groupsetting || $report(_exceptionable2, {
1171
+ }), true, ("object" === typeof input3.groupsetting && null !== input3.groupsetting || $report(_exceptionable2, {
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  path: _path2 + ".groupsetting",
1169
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  expected: "EnabledTermGroupSetting",
1170
1174
  value: input3.groupsetting
package/dist/{chunk-A72XYNKT.js → chunk-BEXUBE5A.js} RENAMED
@@ -27,7 +27,7 @@ var validTermdbTopVariablyExpressedGenesRequest = (input) => {
27
27
  const $io2 = (input3) => "iqr" === input3.type || "var" === input3.type;
28
28
  const $io3 = (input3) => "lst" === input3.type && (void 0 === input3["in"] || "boolean" === typeof input3["in"]) && ("and" === input3.join || "or" === input3.join) && (void 0 === input3.tag || "string" === typeof input3.tag) && (Array.isArray(input3.lst) && input3.lst.every((elem) => "object" === typeof elem && null !== elem && $iu0(elem)));
29
29
  const $io4 = (input3) => (void 0 === input3.join || "string" === typeof input3.join) && (void 0 === input3.isnot || "boolean" === typeof input3.isnot) && ("object" === typeof input3.term && null !== input3.term && $io5(input3.term)) && (void 0 === input3.groupset_label || "string" === typeof input3.groupset_label) && (Array.isArray(input3.values) && input3.values.every((elem) => "object" === typeof elem && null !== elem && false === Array.isArray(elem) && $io7(elem)));
30
- const $io5 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "categorical" === input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io6(input3.values)) && ("object" === typeof input3.groupsetting && null !== input3.groupsetting && $iu4(input3.groupsetting));
30
+ const $io5 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "categorical" === input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io6(input3.values)) && true && ("object" === typeof input3.groupsetting && null !== input3.groupsetting && $iu4(input3.groupsetting));
31
31
  const $io6 = (input3) => Object.keys(input3).every((key) => {
32
32
  const value = input3[key];
33
33
  if (void 0 === value)
@@ -43,10 +43,10 @@ var validTermdbTopVariablyExpressedGenesRequest = (input) => {
43
43
  const $io9 = (input3) => "string" === typeof input3.name && (void 0 === input3.is_grade || "boolean" === typeof input3.is_grade) && (void 0 === input3.is_subcondition || "boolean" === typeof input3.is_subcondition) && (Array.isArray(input3.groups) && input3.groups.every((elem) => "object" === typeof elem && null !== elem && $iu1(elem)));
44
44
  const $io10 = (input3) => "string" === typeof input3.name && "string" === typeof input3.type && (Array.isArray(input3.values) && input3.values.every((elem) => "object" === typeof elem && null !== elem && $io11(elem))) && (void 0 === input3.uncomputable || "boolean" === typeof input3.uncomputable);
45
45
  const $io11 = (input3) => ("string" === typeof input3.key || "number" === typeof input3.key) && "string" === typeof input3.label;
46
- const $io12 = (input3) => "string" === typeof input3.name && "filter" === input3.type && ("object" === typeof input3.filter && null !== input3.filter && $io3(input3.filter));
46
+ const $io12 = (input3) => "string" === typeof input3.name && "filter" === input3.type && ("object" === typeof input3.filter && null !== input3.filter && $io3(input3.filter)) && (void 0 === input3.uncomputable || "boolean" === typeof input3.uncomputable);
47
47
  const $io13 = (input3) => "boolean" === typeof input3.disabled && (void 0 === input3.lst || Array.isArray(input3.lst) && input3.lst.length === 0);
48
48
  const $io14 = (input3) => (void 0 === input3.join || "string" === typeof input3.join) && (void 0 === input3.isnot || "boolean" === typeof input3.isnot) && ("object" === typeof input3.term && null !== input3.term && $io15(input3.term)) && (Array.isArray(input3.ranges) && input3.ranges.every((elem) => "object" === typeof elem && null !== elem && $iu2(elem))) && (Array.isArray(input3.values) && input3.values.every((elem) => "object" === typeof elem && null !== elem && $io24(elem)));
49
- const $io15 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && ("integer" === input3.type || "float" === input3.type || "geneExpression" === input3.type || "metaboliteIntensity" === input3.type) && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io6(input3.values)) && ("object" === typeof input3.bins && null !== input3.bins && $io16(input3.bins)) && (void 0 === input3.unit || "string" === typeof input3.unit) && (void 0 === input3.continuousColorScale || "object" === typeof input3.continuousColorScale && null !== input3.continuousColorScale && $io23(input3.continuousColorScale));
49
+ const $io15 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && ("integer" === input3.type || "float" === input3.type || "geneExpression" === input3.type || "metaboliteIntensity" === input3.type) && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io6(input3.values)) && true && ("object" === typeof input3.bins && null !== input3.bins && $io16(input3.bins)) && (void 0 === input3.unit || "string" === typeof input3.unit) && (void 0 === input3.continuousColorScale || "object" === typeof input3.continuousColorScale && null !== input3.continuousColorScale && $io23(input3.continuousColorScale));
50
50
  const $io16 = (input3) => "object" === typeof input3["default"] && null !== input3["default"] && $iu5(input3["default"]) && ("object" === typeof input3.less && null !== input3.less && $iu5(input3.less)) && (void 0 === input3.label_offset || "number" === typeof input3.label_offset) && (void 0 === input3.label_offset_ignored || "boolean" === typeof input3.label_offset_ignored) && (void 0 === input3.rounding || "string" === typeof input3.rounding) && (void 0 === input3.min || "number" === typeof input3.min) && (void 0 === input3.max || "number" === typeof input3.max);
51
51
  const $io17 = (input3) => (void 0 === input3.hiddenValues || "object" === typeof input3.hiddenValues && null !== input3.hiddenValues && false === Array.isArray(input3.hiddenValues) && $io18(input3.hiddenValues)) && (void 0 === input3.isAtomic || true === input3.isAtomic) && (void 0 === input3.name || "string" === typeof input3.name) && (void 0 === input3.reuseId || "string" === typeof input3.reuseId) && "regular-bin" === input3.type && (void 0 === input3.mode || "discrete" === input3.mode) && "number" === typeof input3.bin_size && ("object" === typeof input3.first_bin && null !== input3.first_bin && $iu6(input3.first_bin)) && (void 0 === input3.last_bin || "object" === typeof input3.last_bin && null !== input3.last_bin && $iu7(input3.last_bin)) && (void 0 === input3.label_offset || "number" === typeof input3.label_offset);
52
52
  const $io18 = (input3) => Object.keys(input3).every((key) => {
@@ -64,11 +64,11 @@ var validTermdbTopVariablyExpressedGenesRequest = (input) => {
64
64
  const $io23 = (input3) => "string" === typeof input3.minColor && "string" === typeof input3.maxColor;
65
65
  const $io24 = (input3) => "string" === typeof input3.key && "number" === typeof input3.value && true === input3.uncomputable && (void 0 === input3.label || "string" === typeof input3.label);
66
66
  const $io25 = (input3) => (void 0 === input3.join || "string" === typeof input3.join) && (void 0 === input3.isnot || "boolean" === typeof input3.isnot) && ("object" === typeof input3.term && null !== input3.term && $io26(input3.term)) && (void 0 === input3.value_by_max_grade || "boolean" === typeof input3.value_by_max_grade) && (void 0 === input3.value_by_most_recent || "boolean" === typeof input3.value_by_most_recent) && (void 0 === input3.value_by_computable_grade || "boolean" === typeof input3.value_by_computable_grade) && (void 0 === input3.grade_and_child || Array.isArray(input3.grade_and_child) && input3.grade_and_child.every((elem) => "object" === typeof elem && null !== elem && $io27(elem)));
67
- const $io26 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "condition" === input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io6(input3.values));
67
+ const $io26 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "condition" === input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io6(input3.values)) && true;
68
68
  const $io27 = (input3) => "number" === typeof input3.grade && "string" === typeof input3.grade_label && (void 0 === input3.child_id || "string" === typeof input3.child_id) && "string" === typeof input3.child_label;
69
69
  const $io28 = (input3) => (void 0 === input3.join || "string" === typeof input3.join) && (void 0 === input3.isnot || "boolean" === typeof input3.isnot) && ("object" === typeof input3.term && null !== input3.term && $iu8(input3.term)) && (Array.isArray(input3.values) && input3.values.every((elem) => "object" === typeof elem && null !== elem && $iu3(elem)));
70
- const $io29 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "geneVariant" === input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io6(input3.values)) && ("object" === typeof input3.groupsetting && null !== input3.groupsetting && $io8(input3.groupsetting)) && "gene" === input3.kind && "string" === typeof input3.gene && (void 0 === input3.chr || "string" === typeof input3.chr) && (void 0 === input3.start || "number" === typeof input3.start) && (void 0 === input3.stop || "number" === typeof input3.stop);
71
- const $io30 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "geneVariant" === input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io6(input3.values)) && ("object" === typeof input3.groupsetting && null !== input3.groupsetting && $io8(input3.groupsetting)) && "coord" === input3.kind && "string" === typeof input3.chr && "number" === typeof input3.start && "number" === typeof input3.stop;
70
+ const $io29 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "geneVariant" === input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io6(input3.values)) && true && ("object" === typeof input3.groupsetting && null !== input3.groupsetting && $io8(input3.groupsetting)) && "gene" === input3.kind && "string" === typeof input3.gene && (void 0 === input3.chr || "string" === typeof input3.chr) && (void 0 === input3.start || "number" === typeof input3.start) && (void 0 === input3.stop || "number" === typeof input3.stop);
71
+ const $io30 = (input3) => "string" === typeof input3.id && "string" === typeof input3.name && "geneVariant" === input3.type && (void 0 === input3.child_types || Array.isArray(input3.child_types) && input3.child_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.hashtmldetail || "boolean" === typeof input3.hashtmldetail) && (void 0 === input3.included_types || Array.isArray(input3.included_types) && input3.included_types.every((elem) => "string" === typeof elem)) && (void 0 === input3.isleaf || "boolean" === typeof input3.isleaf) && (void 0 === input3.values || "object" === typeof input3.values && null !== input3.values && false === Array.isArray(input3.values) && $io6(input3.values)) && true && ("object" === typeof input3.groupsetting && null !== input3.groupsetting && $io8(input3.groupsetting)) && "coord" === input3.kind && "string" === typeof input3.chr && "number" === typeof input3.start && "number" === typeof input3.stop;
72
72
  const $io31 = (input3) => 1 === input3.dt && (Array.isArray(input3.mclassLst) && input3.mclassLst.every((elem) => "M" === elem || "E" === elem || "F" === elem || "N" === elem || "S" === elem || "D" === elem || "I" === elem || "P" === elem || "L" === elem || "Intron" === elem || "Blank" === elem || "WT" === elem || "ITD" === elem || "DEL" === elem || "NLOSS" === elem || "CLOSS" === elem || "Utr3" === elem || "Utr5" === elem || "X" === elem || "noncoding" === elem)) && (Array.isArray(input3.mclassExcludeLst) && input3.mclassExcludeLst.every((elem) => "M" === elem || "E" === elem || "F" === elem || "N" === elem || "S" === elem || "D" === elem || "I" === elem || "P" === elem || "L" === elem || "Intron" === elem || "Blank" === elem || "WT" === elem || "ITD" === elem || "DEL" === elem || "NLOSS" === elem || "CLOSS" === elem || "Utr3" === elem || "Utr5" === elem || "X" === elem || "noncoding" === elem)) && (void 0 === input3.origin || "somatic" === input3.origin || "germline" === input3.origin);
73
73
  const $io32 = (input3) => 4 === input3.dt && (Array.isArray(input3.mclassLst) && input3.mclassLst.every((elem) => "Blank" === elem || "WT" === elem || "CNV_amp" === elem || "CNV_loss" === elem || "CNV_loh" === elem || "CNV_amplification" === elem || "CNV_homozygous_deletion" === elem)) && (Array.isArray(input3.mclassExcludeLst) && input3.mclassExcludeLst.every((elem) => "Blank" === elem || "WT" === elem || "CNV_amp" === elem || "CNV_loss" === elem || "CNV_loh" === elem || "CNV_amplification" === elem || "CNV_homozygous_deletion" === elem)) && (void 0 === input3.origin || "somatic" === input3.origin || "germline" === input3.origin);
74
74
  const $io33 = (input3) => 5 === input3.dt && (Array.isArray(input3.mclassLst) && input3.mclassLst.every((elem) => "Blank" === elem || "WT" === elem || "SV" === elem)) && (Array.isArray(input3.mclassExcludeLst) && input3.mclassExcludeLst.every((elem) => "Blank" === elem || "WT" === elem || "SV" === elem)) && (void 0 === input3.origin || "somatic" === input3.origin || "germline" === input3.origin);
@@ -349,7 +349,7 @@ var validTermdbTopVariablyExpressedGenesRequest = (input) => {
349
349
  path: _path2 + ".values",
350
350
  expected: "(TermValues | undefined)",
351
351
  value: input3.values
352
- }), ("object" === typeof input3.groupsetting && null !== input3.groupsetting || $report(_exceptionable2, {
352
+ }), true, ("object" === typeof input3.groupsetting && null !== input3.groupsetting || $report(_exceptionable2, {
353
353
  path: _path2 + ".groupsetting",
354
354
  expected: "(EnabledTermGroupSetting | __type.o3)",
355
355
  value: input3.groupsetting
@@ -521,6 +521,10 @@ var validTermdbTopVariablyExpressedGenesRequest = (input) => {
521
521
  path: _path2 + ".filter",
522
522
  expected: "Filter",
523
523
  value: input3.filter
524
+ }), void 0 === input3.uncomputable || "boolean" === typeof input3.uncomputable || $report(_exceptionable2, {
525
+ path: _path2 + ".uncomputable",
526
+ expected: "(boolean | undefined)",
527
+ value: input3.uncomputable
524
528
  })].every((flag) => flag);
525
529
  const $vo13 = (input3, _path2, _exceptionable2 = true) => ["boolean" === typeof input3.disabled || $report(_exceptionable2, {
526
530
  path: _path2 + ".disabled",
@@ -640,7 +644,7 @@ var validTermdbTopVariablyExpressedGenesRequest = (input) => {
640
644
  path: _path2 + ".values",
641
645
  expected: "(TermValues | undefined)",
642
646
  value: input3.values
643
- }), ("object" === typeof input3.bins && null !== input3.bins || $report(_exceptionable2, {
647
+ }), true, ("object" === typeof input3.bins && null !== input3.bins || $report(_exceptionable2, {
644
648
  path: _path2 + ".bins",
645
649
  expected: "PresetNumericBins",
646
650
  value: input3.bins
@@ -1032,7 +1036,7 @@ var validTermdbTopVariablyExpressedGenesRequest = (input) => {
1032
1036
  path: _path2 + ".values",
1033
1037
  expected: "(TermValues | undefined)",
1034
1038
  value: input3.values
1035
- })].every((flag) => flag);
1039
+ }), true].every((flag) => flag);
1036
1040
  const $vo27 = (input3, _path2, _exceptionable2 = true) => ["number" === typeof input3.grade || $report(_exceptionable2, {
1037
1041
  path: _path2 + ".grade",
1038
1042
  expected: "number",
@@ -1135,7 +1139,7 @@ var validTermdbTopVariablyExpressedGenesRequest = (input) => {
1135
1139
  path: _path2 + ".values",
1136
1140
  expected: "(TermValues | undefined)",
1137
1141
  value: input3.values
1138
- }), ("object" === typeof input3.groupsetting && null !== input3.groupsetting || $report(_exceptionable2, {
1142
+ }), true, ("object" === typeof input3.groupsetting && null !== input3.groupsetting || $report(_exceptionable2, {
1139
1143
  path: _path2 + ".groupsetting",
1140
1144
  expected: "EnabledTermGroupSetting",
1141
1145
  value: input3.groupsetting
@@ -1216,7 +1220,7 @@ var validTermdbTopVariablyExpressedGenesRequest = (input) => {
1216
1220
  path: _path2 + ".values",
1217
1221
  expected: "(TermValues | undefined)",
1218
1222
  value: input3.values
1219
- }), ("object" === typeof input3.groupsetting && null !== input3.groupsetting || $report(_exceptionable2, {
1223
+ }), true, ("object" === typeof input3.groupsetting && null !== input3.groupsetting || $report(_exceptionable2, {
1220
1224
  path: _path2 + ".groupsetting",
1221
1225
  expected: "EnabledTermGroupSetting",
1222
1226
  value: input3.groupsetting