@sjcrh/proteinpaint-server 2.29.1 → 2.29.3
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/cards/index.json +3 -3
- package/package.json +2 -2
- package/routes/termdb.categories.ts +3 -3
- package/server.js +1 -1
- package/utils/edge.R +86 -0
package/cards/index.json
CHANGED
package/package.json
CHANGED
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@@ -1,6 +1,6 @@
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{
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"name": "@sjcrh/proteinpaint-server",
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-
"version": "2.29.
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3
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+
"version": "2.29.3",
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"description": "a genomics visualization tool for exploring a cohort's genotype and phenotype data",
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"main": "server.js",
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"bin": "start.js",
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@@ -56,7 +56,7 @@
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},
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"dependencies": {
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"@sjcrh/augen": "2.27.0",
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-
"@sjcrh/proteinpaint-rust": "2.
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+
"@sjcrh/proteinpaint-rust": "2.29.2",
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"better-sqlite3": "^7.5.3",
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"body-parser": "^1.15.2",
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"canvas": "~2.9.3",
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@@ -64,12 +64,12 @@ function init({ genomes }) {
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const q = req.query // as getcategoriesRequest
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try {
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const g = genomes[req.query.genome]
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-
const ds = g.datasets[req.query.dslabel]
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-
const tdb = ds.cohort.termdb
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-
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if (!g) throw 'invalid genome name'
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const ds = g.datasets[req.query.dslabel]
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if (!ds) throw 'invalid dataset name'
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const tdb = ds.cohort.termdb
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if (!tdb) throw 'invalid termdb object'
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+
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await trigger_getcategories(q, res, tdb, ds, g) // as getcategoriesResponse
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} catch (e) {
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// eslint-disable-next-line @typescript-eslint/ban-ts-comment
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