@sjcrh/proteinpaint-server 2.15.0 → 2.17.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dataset/clinvar.hg19.js +53 -51
- package/dataset/clinvar.hg38.js +60 -58
- package/dataset/clinvar.js +49 -55
- package/genome/CriGri.js +23 -1853
- package/genome/danRer10.js +48 -1108
- package/genome/dm3.js +47 -60
- package/genome/dm6.js +48 -1916
- package/genome/galGal5.js +48 -23522
- package/genome/galGal6.js +48 -512
- package/genome/hg19.js +210 -304
- package/genome/hg38.js +108 -474
- package/genome/hg38.test.js +42 -409
- package/genome/hgvirus.js +21 -43
- package/genome/mm10.js +70 -135
- package/genome/mm9.js +82 -118
- package/genome/rn6.js +49 -1000
- package/package.json +10 -7
- package/server.js +1 -2
- package/shared/common.js +4 -0
- package/src/serverconfig.js +10 -2
- package/utils/lowess.R +9 -0
- package/server.js.LICENSE.txt +0 -1
package/package.json
CHANGED
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@@ -1,6 +1,6 @@
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{
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"name": "@sjcrh/proteinpaint-server",
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-
"version": "2.
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"version": "2.17.0",
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"description": "a genomics visualization tool for exploring a cohort's genotype and phenotype data",
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"main": "server.js",
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"bin": "start.js",
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@@ -10,12 +10,13 @@
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},
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"scripts": {
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"dev": "webpack --env NODE_ENV=development --watch --color",
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"start": "nodemon server.js --watch ./server*.js* --watch
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"pretest": "./test/pretest.js",
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"test": "webpack --env NODE_ENV=test exportsFilename=all-test-context.js && node test/serverTests.js",
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"test:unit": "webpack --env NODE_ENV=test exportsFilename=unit-test-context.js && node test/serverTests.js",
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"start": "tsc genome/*.ts dataset/*.ts && nodemon --enable-source-maps server.js --watch ./server*.js* --watch dataset/*.ts --watch genome/*.ts",
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"pretest": "tsc genome/*.ts dataset/*.ts && ./test/pretest.js",
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"test": "webpack --env NODE_ENV=test exportsFilename=all-test-context.js && node --enable-source-maps test/serverTests.js",
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"test:unit": "webpack --env NODE_ENV=test exportsFilename=unit-test-context.js && tsc dataset/*.ts && node --enable-source-maps test/serverTests.js",
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"pretest:integration": "tsc genome/*.ts dataset/*.ts",
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"test:integration": "echo 'TODO: server integration tests'",
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"prepack": "webpack --env NODE_ENV=production",
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"prepack": "tsc genome/*.ts dataset/*.ts && webpack --env NODE_ENV=production",
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"response": "nodemon modules/test/test.server.js --watch src",
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"getconf": "../build/getConfigProp.js"
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},
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@@ -26,12 +27,14 @@
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"@babel/plugin-proposal-optional-chaining": "^7.9.0",
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"@babel/plugin-transform-runtime": "^7.14.5",
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"@babel/preset-env": "^7.9.6",
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"@babel/preset-typescript": "^7.21.4",
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"@babel/register": "^7.14.5",
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"babel-loader": "^8.2.2",
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"node-watch": "^0.7.1",
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"nodemon": "^2.0.19",
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"prettier": "1.18.2",
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"tape": "^5.2.2",
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"typescript": "^5.0.3",
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"webpack": "^5.76.0",
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"webpack-cli": "^4.9.2",
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"webpack-node-externals": "^3.0.0",
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@@ -67,7 +70,7 @@
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"bin.js",
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"dataset/clinvar*.js",
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"dataset/gdc*.js",
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"genome",
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"genome/*.js",
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"src/serverconfig.js",
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"src/lines2R.js",
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"src/mds3.gdc.filter.js",
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