@sjcrh/proteinpaint-front 2.40.0 → 2.40.2
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/bundles.tgz +0 -0
- package/package.json +2 -2
- package/public/cards/LD.json +36 -0
- package/public/cards/index.json +13 -3
package/bundles.tgz
CHANGED
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Binary file
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package/package.json
CHANGED
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@@ -1,6 +1,6 @@
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{
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"name": "@sjcrh/proteinpaint-front",
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"version": "2.40.
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"version": "2.40.2",
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"main": "src/index.js",
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"bin": "init.js",
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"scripts": {
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@@ -11,7 +11,7 @@
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"test:integration": "echo 'TODO: front integration tests'"
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},
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"devDependencies": {
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"@sjcrh/proteinpaint-client": "2.40.
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"@sjcrh/proteinpaint-client": "2.40.2",
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"webpack": "^5.76.0",
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"webpack-cli": "^4.9.2",
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"webpack-node-externals": "^3.0.0",
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@@ -0,0 +1,36 @@
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{
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"ppcalls": [
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{
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"message": "<p>The LD (linkage disequilibrium) track shows the non-random association of alleles at different loci in a given population. Full data set available from the <a href='https://viz.stjude.cloud/cancer-survivorship/visualization/st-jude-survivorship-portal~18'>St. Jude Survivorship Portal<a/>.</p>",
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"urlparam": "?block=on&genome=hg38&ldfile=European ancestry demo,proteinpaint_demo/hg38/LD/Euro_demo_slice.gz",
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"runargs": {
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"parseurl": true,
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"block": true,
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"nobox": 1,
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"noheader": 1,
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"genome": "hg38",
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"nativetracks": "Refgene",
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"tracks": [
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{
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"type": "ld",
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"name": "European ancestry demo",
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"file": "proteinpaint_demo/hg38/LD/Euro_demo_slice.gz",
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"viewrangelimit": 200000,
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"nochr": false
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},
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{
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"type": "ld",
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"name": "African ancestry demo",
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"file": "proteinpaint_demo/hg38/LD/Afro_demo_slice.gz",
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"viewrangelimit": 200000,
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"nochr": false
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}
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]
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},
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"testSpec": {
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"expected": { "image": 2, "svg": 1, "rect": 1 }
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}
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}
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],
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"ribbonMessage": "Explore new LD maps! Paper under review."
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}
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package/public/cards/index.json
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@@ -31,7 +31,7 @@
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"type": "nestedCard",
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"name": "Use Cases",
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"section": "nestedCards",
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"description": "
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"description": "Find workflows and processes for specific needs",
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"children": [
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{
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"name": "Generate GenomePaint SV View",
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"type": "card",
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"name": "Track list & facet table",
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"section": "tracks",
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"description": " ",
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"description": "Organize large number of tracks into a tables",
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"image": "https://proteinpaint.stjude.org/ppdemo/images/tklist-square.png",
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"sandboxJson": "tklist",
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"searchterms": []
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"type": "card",
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"name": "Gene Fusion",
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"section": "tracks",
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"description": " ",
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"description": "Visualize gene fusions",
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"image": "https://proteinpaint.stjude.org/ppdemo/images/genefusion-square.png",
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"sandboxJson": "genefusion",
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"searchterms": []
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"sandboxJson": "gdcbam",
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"searchterms": []
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},
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{
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"type": "card",
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"name": "Linkage Disequilibrium",
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"section": "tracks",
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"ribbon": {"text": "new", "expireDate": "2024-03-01"},
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"description": "Non-random association of alleles at different loci",
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"image": "https://proteinpaint.stjude.org/ppdemo/images/ld-square.png",
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"sandboxJson": "ld",
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"searchterms": ["ld"]
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},
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{
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"type": "card",
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"name": "Additional Track Features",
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