@sjcrh/proteinpaint-front 2.170.18 → 2.170.21

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (4) hide show
  1. package/bundles.tgz +0 -0
  2. package/package.json +4 -3
  3. package/public/cards/dataMatrix.json +0 -1
  4. package/public/cards/geneExp.json +1 -4
package/bundles.tgz CHANGED
Binary file
package/package.json CHANGED
@@ -1,18 +1,19 @@
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  {
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  "name": "@sjcrh/proteinpaint-front",
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- "version": "2.170.18",
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+ "version": "2.170.21",
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  "browser": "src/app.js",
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  "main": "src/index.js",
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  "bin": "init.js",
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  "scripts": {
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  "dev": "webpack --env NODE_ENV=development --watch --progress --color",
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  "//TODO": "# delete webpack use, once esbuild migration is fully tested and unlikely to be reverted",
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- "prepack": "rm -rf public/bin && rm -rf *.tgz && webpack && tar -czf bundles.tgz public/bin",
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+ "client-dist": "if ! -d ../client/dist; then cd ../client; npm pack; fi",
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+ "prepack": "npm run client-dist && rm -rf public/bin && rm -rf *.tgz && webpack && tar -czf bundles.tgz public/bin",
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  "test:unit": "echo 'TODO: front unit tests'",
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  "test:integration": "echo 'TODO: front integration tests'"
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  },
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  "devDependencies": {
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- "@sjcrh/proteinpaint-client": "2.170.18",
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+ "@sjcrh/proteinpaint-client": "2.170.21",
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  "webpack": "^5.76.0",
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  "webpack-cli": "^4.9.2",
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  "webpack-node-externals": "^3.0.0",
package/public/cards/dataMatrix.json CHANGED
@@ -15,7 +15,6 @@
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  },
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  "termgroups":[{"lst":[
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  {"id":"case.project.name"},
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- {"id":"case.diagnoses.age_at_diagnosis","q":{"mode":"continuous"}},
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  {"term":{"type":"geneExpression","gene":"IDH1"},"q":{"mode":"continuous"}}
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  ]}]
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  },
package/public/cards/geneExp.json CHANGED
@@ -2,7 +2,7 @@
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  "ribbonMessage": "Please explore our newest tool, gene expression clustering.",
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  "ppcalls": [
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  {
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- "urlparam":"/?mass={%22dslabel%22:%22GDC%22,%22genome%22:%22hg38%22,%22nav%22:{%22header_mode%22:%22hidden%22},%22termfilter%22:{%22filter0%22:{%22op%22:%22and%22,%22content%22:[{%22op%22:%22in%22,%22content%22:{%22field%22:%22cases.project.project_id%22,%22value%22:[%22TCGA-GBM%22]}}]}},%22plots%22:[{%22chartType%22:%22hierCluster%22,%22dataType%22:%22geneExpression%22,%22terms%22:[{%22gene%22:%22AKT1%22,%22type%22:%22geneExpression%22},{%22gene%22:%22MYC%22,%22type%22:%22geneExpression%22},{%22gene%22:%22YAP1%22,%22type%22:%22geneExpression%22},{%22gene%22:%22CD109%22,%22type%22:%22geneExpression%22},{%22gene%22:%22BCL6%22,%22type%22:%22geneExpression%22},{%22gene%22:%22BRAF%22,%22type%22:%22geneExpression%22},{%22gene%22:%22CDKN2A%22,%22type%22:%22geneExpression%22},{%22gene%22:%22CD34%22,%22type%22:%22geneExpression%22},{%22gene%22:%22ALDH1A3%22,%22type%22:%22geneExpression%22},{%22gene%22:%22CTNNB1%22,%22type%22:%22geneExpression%22},{%22gene%22:%22CXCL14%22,%22type%22:%22geneExpression%22},{%22gene%22:%22E2F1%22,%22type%22:%22geneExpression%22},{%22gene%22:%22EGFR%22,%22type%22:%22geneExpression%22},{%22gene%22:%22PTEN%22,%22type%22:%22geneExpression%22},{%22gene%22:%22FAT1%22,%22type%22:%22geneExpression%22},{%22gene%22:%22FGFR1%22,%22type%22:%22geneExpression%22},{%22gene%22:%22FOXM1%22,%22type%22:%22geneExpression%22},{%22gene%22:%22IDH1%22,%22type%22:%22geneExpression%22},{%22gene%22:%22IDH2%22,%22type%22:%22geneExpression%22},{%22gene%22:%22HOXA10%22,%22type%22:%22geneExpression%22},{%22gene%22:%22HOXA13%22,%22type%22:%22geneExpression%22},{%22gene%22:%22HOXA9%22,%22type%22:%22geneExpression%22},{%22gene%22:%22LAT1%22,%22type%22:%22geneExpression%22},{%22gene%22:%22MAPK1%22,%22type%22:%22geneExpression%22},{%22gene%22:%22MAPK3%22,%22type%22:%22geneExpression%22},{%22gene%22:%22MMP1%22,%22type%22:%22geneExpression%22},{%22gene%22:%22MGMT%22,%22type%22:%22geneExpression%22},{%22gene%22:%22NOTCH3%22,%22type%22:%22geneExpression%22},{%22gene%22:%22PIK3CA%22,%22type%22:%22geneExpression%22},{%22gene%22:%22PDGFRA%22,%22type%22:%22geneExpression%22},{%22gene%22:%22RB1%22,%22type%22:%22geneExpression%22},{%22gene%22:%22TP53%22,%22type%22:%22geneExpression%22},{%22gene%22:%22WWTR1%22,%22type%22:%22geneExpression%22},{%22gene%22:%22ROS1%22,%22type%22:%22geneExpression%22}],%22termgroups%22:[{%22name%22:%22Variables%22,%22lst%22:[{%22id%22:%22case.diagnoses.age_at_diagnosis%22},{%22id%22:%22case.demographic.gender%22},{%22id%22:%22case.project.project_id%22},{%22id%22:%22case.tissue_source_site.name%22}]}]}]}",
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+ "urlparam":"/?mass={%22dslabel%22:%22GDC%22,%22genome%22:%22hg38%22,%22nav%22:{%22header_mode%22:%22hidden%22},%22termfilter%22:{%22filter0%22:{%22op%22:%22and%22,%22content%22:[{%22op%22:%22in%22,%22content%22:{%22field%22:%22cases.project.project_id%22,%22value%22:[%22TCGA-GBM%22]}}]}},%22plots%22:[{%22chartType%22:%22hierCluster%22,%22dataType%22:%22geneExpression%22,%22terms%22:[{%22gene%22:%22AKT1%22,%22type%22:%22geneExpression%22},{%22gene%22:%22MYC%22,%22type%22:%22geneExpression%22},{%22gene%22:%22YAP1%22,%22type%22:%22geneExpression%22},{%22gene%22:%22CD109%22,%22type%22:%22geneExpression%22},{%22gene%22:%22BCL6%22,%22type%22:%22geneExpression%22},{%22gene%22:%22BRAF%22,%22type%22:%22geneExpression%22},{%22gene%22:%22CDKN2A%22,%22type%22:%22geneExpression%22},{%22gene%22:%22CD34%22,%22type%22:%22geneExpression%22},{%22gene%22:%22ALDH1A3%22,%22type%22:%22geneExpression%22},{%22gene%22:%22CTNNB1%22,%22type%22:%22geneExpression%22},{%22gene%22:%22CXCL14%22,%22type%22:%22geneExpression%22},{%22gene%22:%22E2F1%22,%22type%22:%22geneExpression%22},{%22gene%22:%22EGFR%22,%22type%22:%22geneExpression%22},{%22gene%22:%22PTEN%22,%22type%22:%22geneExpression%22},{%22gene%22:%22FAT1%22,%22type%22:%22geneExpression%22},{%22gene%22:%22FGFR1%22,%22type%22:%22geneExpression%22},{%22gene%22:%22FOXM1%22,%22type%22:%22geneExpression%22},{%22gene%22:%22IDH1%22,%22type%22:%22geneExpression%22},{%22gene%22:%22IDH2%22,%22type%22:%22geneExpression%22},{%22gene%22:%22HOXA10%22,%22type%22:%22geneExpression%22},{%22gene%22:%22HOXA13%22,%22type%22:%22geneExpression%22},{%22gene%22:%22HOXA9%22,%22type%22:%22geneExpression%22},{%22gene%22:%22LAT1%22,%22type%22:%22geneExpression%22},{%22gene%22:%22MAPK1%22,%22type%22:%22geneExpression%22},{%22gene%22:%22MAPK3%22,%22type%22:%22geneExpression%22},{%22gene%22:%22MMP1%22,%22type%22:%22geneExpression%22},{%22gene%22:%22MGMT%22,%22type%22:%22geneExpression%22},{%22gene%22:%22NOTCH3%22,%22type%22:%22geneExpression%22},{%22gene%22:%22PIK3CA%22,%22type%22:%22geneExpression%22},{%22gene%22:%22PDGFRA%22,%22type%22:%22geneExpression%22},{%22gene%22:%22RB1%22,%22type%22:%22geneExpression%22},{%22gene%22:%22TP53%22,%22type%22:%22geneExpression%22},{%22gene%22:%22WWTR1%22,%22type%22:%22geneExpression%22},{%22gene%22:%22ROS1%22,%22type%22:%22geneExpression%22}],%22termgroups%22:[{%22name%22:%22Variables%22,%22lst%22:[{%22id%22:%22case.demographic.gender%22},{%22id%22:%22case.project.project_id%22},{%22id%22:%22case.tissue_source_site.name%22}]}]}]}",
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  "runargs": {
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  "mass": {
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  "state": {
@@ -173,9 +173,6 @@
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  {
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  "name": "Variables",
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  "lst": [
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- {
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- "id": "case.diagnoses.age_at_diagnosis"
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- },
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  {
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  "id": "case.demographic.gender"
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  },