@sjcrh/proteinpaint-client 2.89.0 → 2.89.1-0

package/dist/{AppHeader-2EJ3DTRM.js → AppHeader-6U4ILCQH.js}

@@ -4,7 +4,7 @@ import {
 } from "./chunk-GLTXSGJ5.js";
 import {
   InputSearch
-} from "./chunk-UAZ5L4NV.js";
+} from "./chunk-NKNMYTPJ.js";
 import "./chunk-7KFEDC2T.js";
 import "./chunk-FCPSU6WB.js";
 import "./chunk-4WBP22U2.js";
@@ -15,14 +15,14 @@ import "./chunk-U74RHDII.js";
 import "./chunk-PGEEB5NA.js";
 import "./chunk-VSRNBBZH.js";
 import "./chunk-Z7ZWX5W5.js";
-import "./chunk-5BC2XRVF.js";
+import "./chunk-NHPZSGTH.js";
 import "./chunk-PBT5AMVE.js";
 import "./chunk-LGC254YE.js";
 import "./chunk-WTM3GD2X.js";
 import {
   get_tklst
-} from "./chunk-23KCYYJD.js";
-import "./chunk-ZSPXD2UT.js";
+} from "./chunk-HSMYW3P7.js";
+import "./chunk-VDHN52SK.js";
 import "./chunk-MYPTC6HX.js";
 import "./chunk-MKAF2BHB.js";
 import {
@@ -37,7 +37,7 @@ import "./chunk-SJ4KZVLF.js";
 import "./chunk-ALPXXDQD.js";
 import {
   block_init_default
-} from "./chunk-EVL5SFID.js";
+} from "./chunk-HMNOUI5M.js";
 import {
   throwMsgWithFilePathAndFnName
 } from "./chunk-RKJGIOIF.js";
@@ -236,7 +236,7 @@ async function findgene2paint(str, app, genomename, jwt) {
       debugmode: app.debugmode
     };
     first_genetrack_tolist(g, par2.tklst);
-    import("./block-4PFBGIY7.js").then((b) => new b.Block(par2)).catch((err) => {
+    import("./block-OO6BUYBQ.js").then((b) => new b.Block(par2)).catch((err) => {
       app.error0(err);
     });
     return;
@@ -842,7 +842,7 @@ var AppHeader = class _AppHeader {
         debugmode: app.debugmode
       };
       first_genetrack_tolist(g, par.tklst);
-      import("./block-4PFBGIY7.js").then((b) => new b.Block(par));
+      import("./block-OO6BUYBQ.js").then((b) => new b.Block(par));
       app.drawer.dispatch({ type: "is_apps_btn_active", value: false });
     });
     return g_browser_btn;
@@ -855,4 +855,4 @@ var AppHeader = class _AppHeader {
 export {
   AppHeader
 };
-//# sourceMappingURL=AppHeader-2EJ3DTRM.js.map
+//# sourceMappingURL=AppHeader-6U4ILCQH.js.map

package/dist/{DEanalysis-4G3RNNNO.js → DEanalysis-PYGRP2GF.js}

@@ -2,7 +2,7 @@ import "./chunk-Q7EFDAC2.js";
 import {
   axisstyle,
   controlsInit
-} from "./chunk-UAZ5L4NV.js";
+} from "./chunk-NKNMYTPJ.js";
 import "./chunk-7KFEDC2T.js";
 import "./chunk-FCPSU6WB.js";
 import "./chunk-4WBP22U2.js";
@@ -13,7 +13,7 @@ import "./chunk-U74RHDII.js";
 import "./chunk-PGEEB5NA.js";
 import "./chunk-VSRNBBZH.js";
 import "./chunk-Z7ZWX5W5.js";
-import "./chunk-5BC2XRVF.js";
+import "./chunk-NHPZSGTH.js";
 import {
   roundValueAuto
 } from "./chunk-PBT5AMVE.js";
@@ -644,4 +644,4 @@ export {
   makeChartBtnMenu,
   openHiercluster
 };
-//# sourceMappingURL=DEanalysis-4G3RNNNO.js.map
+//# sourceMappingURL=DEanalysis-PYGRP2GF.js.map

package/dist/{Disco-N2XI5D7E.js → Disco-46PJJGFX.js}

@@ -1,7 +1,7 @@
 import {
   configUiInit,
   svgLegend
-} from "./chunk-UAZ5L4NV.js";
+} from "./chunk-NKNMYTPJ.js";
 import "./chunk-7KFEDC2T.js";
 import "./chunk-FCPSU6WB.js";
 import "./chunk-4WBP22U2.js";
@@ -14,7 +14,7 @@ import "./chunk-U74RHDII.js";
 import "./chunk-PGEEB5NA.js";
 import "./chunk-VSRNBBZH.js";
 import "./chunk-Z7ZWX5W5.js";
-import "./chunk-5BC2XRVF.js";
+import "./chunk-NHPZSGTH.js";
 import "./chunk-PBT5AMVE.js";
 import "./chunk-LGC254YE.js";
 import "./chunk-WTM3GD2X.js";
@@ -224,7 +224,7 @@ var DiscoInteractions = class {
           }
         ]
       };
-      const _ = await import("./block.init-4Q2Q3R4F.js");
+      const _ = await import("./block.init-RRIETYIO.js");
       await _.default(arg);
     };
   }
@@ -1804,44 +1804,64 @@ var LegendJSONMapper = class {
     if (gain && loss && cap) {
       let cnvOrder = 0;
       const cnvItems = [];
-      if (gain.value > 0) {
-        cnvItems.push({
-          termid: legend.cnvTitle,
-          key: 1 /* Gain */,
-          text: "Copy number gain",
-          width: 100,
-          domain: [0, gain.value],
-          // minLabel: 0,
-          // maxLabel: gain.value,
-          order: cnvOrder++,
-          isLegendItem: true,
-          dt: 4,
-          scale: linear([0, 1], ["white", gain.color])
-        });
+      const base = {
+        termid: legend.cnvTitle,
+        width: 100,
+        order: cnvOrder++,
+        isLegendItem: true,
+        dt: 4
+      };
+      if (gain.value > 0 && loss.value < 0) {
+        const maxValue = Math.max(Math.abs(loss.value), gain.value);
+        const domain = maxValue < 1 ? [-1, 0, 1] : [-maxValue, 0, maxValue];
+        cnvItems.push(
+          Object.assign(
+            {
+              key: 3 /* LossGain */,
+              domain,
+              scale: linear([-1, 0, 1], [loss.color, "white", gain.color])
+            },
+            base
+          )
+        );
+      } else {
+        if (gain.value > 0) {
+          cnvItems.push(
+            Object.assign(
+              {
+                key: 1 /* Gain */,
+                text: "Copy number gain",
+                domain: [0, gain.value],
+                scale: linear([0, 1], ["white", gain.color])
+              },
+              base
+            )
+          );
+        }
+        if (loss.value < 0) {
+          cnvItems.push(
+            Object.assign(
+              {
+                key: 0 /* Loss */,
+                text: "Copy number loss",
+                domain: [loss.value, 0],
+                scale: linear([0, 1], [loss.color, "white"])
+              },
+              base
+            )
+          );
+        }
       }
-      if (loss.value < 0) {
+      if (gain.value > 0 || loss.value < 0) {
         cnvItems.push({
           termid: legend.cnvTitle,
-          key: 0 /* Loss */,
-          text: "Copy number loss",
-          width: 100,
-          domain: [loss.value, 0],
-          // minLabel: 0,
-          // maxLabel: loss.value,
+          key: 2 /* Cap */,
+          text: `Capping: ${cap.value}`,
+          color: cap.color,
           order: cnvOrder++,
-          isLegendItem: true,
-          dt: 4,
-          scale: linear([0, 1], [loss.color, "white"])
+          border: "1px solid #ccc"
         });
       }
-      cnvItems.push({
-        termid: legend.cnvTitle,
-        key: 2 /* Cap */,
-        text: `Capping: ${cap.value}`,
-        color: cap.color,
-        order: cnvOrder++,
-        border: "1px solid #ccc"
-      });
       legendJSON.push({
         name: legend.cnvTitle,
         order,
@@ -2353,7 +2373,7 @@ var Disco = class {
       ];
       configInputsOptions.push(...filterMutationsGenesCheckbox);
     }
-    const mandatoryConfigInputOptions = [
+    const cnvConfigInputOptions = [
       {
         label: "CNV capping",
         type: "number",
@@ -2384,7 +2404,8 @@ var Disco = class {
         max: 100
       }
     ];
-    configInputsOptions.push(...mandatoryConfigInputOptions);
+    if (viewModel.cnvMaxValue !== 0 || viewModel.cnvMinValue !== 0)
+      configInputsOptions.push(...cnvConfigInputOptions);
     return configInputsOptions;
   }
   async main() {
@@ -2461,4 +2482,4 @@ export {
   discoInit,
   getPlotConfig
 };
-//# sourceMappingURL=Disco-N2XI5D7E.js.map
+//# sourceMappingURL=Disco-46PJJGFX.js.map