@sjcrh/proteinpaint-client 2.208.0 → 2.209.0

package/dist/plot.2dvaf-5OHUFTMK.js

@@ -1,372 +0,0 @@
-import {
-  axisstyle,
-  font,
-  make_table_2col
-} from "./chunk-QJ3HYZH3.js";
-import "./chunk-HJ6L54YS.js";
-import "./chunk-KV4W2ACA.js";
-import "./chunk-DMWOK4DS.js";
-import {
-  Menu
-} from "./chunk-ELJX3QIQ.js";
-import "./chunk-5IMFPVGT.js";
-import "./chunk-EEB5VE2A.js";
-import "./chunk-6RRZRISL.js";
-import "./chunk-2KM4PRQM.js";
-import "./chunk-VMRO6DMC.js";
-import "./chunk-HKKTNIMX.js";
-import "./chunk-GMRIEUBW.js";
-import "./chunk-4EZLVENZ.js";
-import "./chunk-WINIL2KN.js";
-import "./chunk-PF4DSFDR.js";
-import "./chunk-7X6NF7NI.js";
-import "./chunk-W5J3LTYS.js";
-import {
-  axisBottom,
-  axisLeft,
-  axisRight
-} from "./chunk-Z2ZITHT4.js";
-import {
-  linear
-} from "./chunk-4OLM3KSB.js";
-import "./chunk-FXQXCOII.js";
-import "./chunk-TLT4YIG3.js";
-import "./chunk-5R63Q5KH.js";
-import "./chunk-I6Y4O3RR.js";
-import "./chunk-Q5RDQNIT.js";
-import "./chunk-DQC5FFGV.js";
-import "./chunk-HS5PO5ZQ.js";
-
-// src/old/plot.2dvaf.js
-var gray = "#999";
-var centercolor = "#d95f02";
-var xcolor = "#7570b3";
-var ycolor = "#1b9e77";
-var rectfill = "#f3f3f3";
-var dotstrokeopacity = 0.9;
-function plot_2dvaf(data, cfg, holder) {
-  if (cfg.individualcategories) {
-    for (const d of data) {
-      const value = d[cfg.individualcategories.categorykey];
-      if (value && cfg.individualcategories.categories[value]) {
-        d.color = cfg.individualcategories.categories[value].color;
-      }
-    }
-  }
-  const ik = cfg.individualkey;
-  {
-    const div = holder.append("div").style("margin", "5px 10px 10px 30px");
-    const s = /* @__PURE__ */ new Set();
-    for (const d of data) {
-      s.add(d[ik]);
-    }
-    div.append("div").text(s.size + " " + ik + (s.size > 1 ? "s" : ""));
-    if (cfg.individualcategories) {
-      for (const k in cfg.individualcategories.categories) {
-        const s2 = /* @__PURE__ */ new Set();
-        for (const d of data) {
-          const ikname = d[ik];
-          if (!ikname) continue;
-          if (d[cfg.individualcategories.categorykey] == k) {
-            s2.add(ikname);
-          }
-        }
-        const row = div.append("div").style("margin", "5px");
-        row.append("div").style("display", "inline-block").attr("class", "sja_mcdot").style("background-color", cfg.individualcategories.categories[k].color).style("padding", "1px 3px").text(s2.size).style("margin-right", "5px");
-        row.append("span").text(cfg.individualcategories.categories[k].label || k).style("color", cfg.individualcategories.categories[k].color);
-      }
-    }
-  }
-  const tip = new Menu({ border: "none", padding: "0px" });
-  const mouseover = (s, x, y) => {
-    if (circle_yleft) {
-      circle_yleft.filter((d) => d[ik] == s[ik]).attr("fill-opacity", 0.5);
-    }
-    if (circle_yright) {
-      circle_yright.filter((d) => d[ik] == s[ik]).attr("fill-opacity", 0.5);
-    }
-    circle_xdp.filter((d) => d[ik] == s[ik]).attr("fill-opacity", 0.5);
-    circle_center.filter((d) => d[ik] == s[ik]).attr("fill-opacity", 0.5);
-    tip.show(x, y);
-    tip.clear();
-    const lst = [
-      { k: ik, v: s[ik] },
-      {
-        k: cfg.xsampletype,
-        v: s.sampletypes[cfg.xsampletype].vaf.toFixed(2) + ", " + s.sampletypes[cfg.xsampletype].total
-      }
-    ];
-    if (cfg.individualcategories) {
-      const v = s[cfg.individualcategories.categorykey];
-      if (v && cfg.individualcategories.categories[v]) {
-        lst.push({
-          k: cfg.individualcategories.categorylabel || cfg.individualcategories.categorykey,
-          v: cfg.individualcategories.categories[v].label || v
-        });
-      }
-    }
-    if (s.sampletypes[cfg.yleftsampletype]) {
-      lst.push({
-        k: cfg.yleftsampletype,
-        v: s.sampletypes[cfg.yleftsampletype].vaf.toFixed(2) + ", " + s.sampletypes[cfg.yleftsampletype].total
-      });
-    }
-    if (s.sampletypes[cfg.yrightsampletype]) {
-      lst.push({
-        k: cfg.yrightsampletype,
-        v: s.sampletypes[cfg.yrightsampletype].vaf.toFixed(2) + ", " + s.sampletypes[cfg.yrightsampletype].total
-      });
-    }
-    make_table_2col(tip.d, lst);
-  };
-  const mouseout = (s) => {
-    tip.hide();
-    if (circle_yleft) {
-      circle_yleft.filter((d) => d[ik] == s[ik]).attr("fill-opacity", 0);
-    }
-    if (circle_yright) {
-      circle_yright.filter((d) => d[ik] == s[ik]).attr("fill-opacity", 0);
-    }
-    circle_xdp.filter((d) => d[ik] == s[ik]).attr("fill-opacity", 0);
-    circle_center.filter((d) => d[ik] == s[ik]).attr("fill-opacity", 0);
-  };
-  let xwidth = 300;
-  let yheight = 300;
-  let marksize;
-  let xvafheight = 80;
-  let yvafwidth = 80;
-  let xdpheight = 100;
-  let ydpheight = 100;
-  let sp = 10;
-  let sp2 = 10;
-  let toppad = 10;
-  let rightpad = 10;
-  let radius = 8;
-  let fontsize = 12;
-  let ticksize = 6;
-  let maxdp_x = 0;
-  let maxdp_yleft = 0;
-  let maxdp_yright = 0;
-  for (const d of data) {
-    maxdp_x = Math.max(maxdp_x, d.sampletypes[cfg.xsampletype].total);
-    if (d.sampletypes[cfg.yleftsampletype]) {
-      maxdp_yleft = Math.max(maxdp_yleft, d.sampletypes[cfg.yleftsampletype].total);
-    }
-    if (d.sampletypes[cfg.yrightsampletype]) {
-      maxdp_yright = Math.max(maxdp_yleft, d.sampletypes[cfg.yrightsampletype].total);
-    }
-  }
-  let maxvaf = 1;
-  let minvaf = 0;
-  const scalevaf_x = linear().domain([minvaf, maxvaf]);
-  const scalevaf_y = linear().domain([minvaf, maxvaf]);
-  const scaledp_x = linear().domain([0, maxdp_x]);
-  let scaledp_yleft;
-  let scaledp_yright;
-  if (maxdp_yleft) {
-    scaledp_yleft = linear().domain([0, maxdp_yleft]);
-  }
-  if (maxdp_yright) {
-    scaledp_yright = linear().domain([0, maxdp_yright]);
-  }
-  const svg = holder.append("svg").style("margin", "10px");
-  let axevaf_yleft, axisvaf_yleft, yleftlabg, yleftlab;
-  if (maxdp_yleft) {
-    axevaf_yleft = svg.append("g");
-    axisvaf_yleft = axevaf_yleft.append("g");
-    yleftlabg = axevaf_yleft.append("g");
-    yleftlab = yleftlabg.append("text").attr("transform", "rotate(-90)").text(cfg.yleftsampletype + " VAF").attr("font-family", font).attr("fill", ycolor).attr("text-anchor", "middle").attr("dominant-baseline", "central");
-  }
-  let axevaf_yright, axisvaf_yright, yrightlabg, yrightlab;
-  if (maxdp_yright) {
-    axevaf_yright = svg.append("g");
-    axisvaf_yright = axevaf_yright.append("g");
-    yrightlabg = axevaf_yright.append("g");
-    yrightlab = yrightlabg.append("text").attr("transform", "rotate(-90)").text(cfg.yrightsampletype + " VAF").attr("font-family", font).attr("fill", ycolor).attr("text-anchor", "middle").attr("dominant-baseline", "central");
-  }
-  const axe_xvaf = svg.append("g");
-  const axis_xvaf = axe_xvaf.append("g");
-  const xlab = axe_xvaf.append("text").text(cfg.xsampletype + " VAF").attr("font-family", font).attr("fill", xcolor).attr("text-anchor", "middle");
-  let axedp_yleft, rectdp_yleft, midlinedp_yleft, axisdp_yleft, dotg_yleft, circle_yleft;
-  if (maxdp_yleft) {
-    axedp_yleft = svg.append("g");
-    rectdp_yleft = axedp_yleft.append("rect").attr("fill", rectfill);
-    midlinedp_yleft = axedp_yleft.append("line").attr("stroke", "white").attr("stroke-width", 2);
-    axisdp_yleft = axedp_yleft.append("g");
-    dotg_yleft = axedp_yleft.append("g").selectAll().data(data.filter((d) => d.sampletypes[cfg.yleftsampletype])).enter().append("g");
-    circle_yleft = dotg_yleft.append("circle").attr("fill", (d) => d.color || ycolor).attr("fill-opacity", 0).attr("stroke", (d) => d.color || ycolor).attr("stroke-opacity", dotstrokeopacity).on("mouseover", (event, d) => mouseover(d, event.clientX, event.clientY)).on("mouseout", mouseout);
-  }
-  let axedp_yright, rectdp_yright, midlinedp_yright, axisdp_yright, dotg_yright, circle_yright;
-  if (maxdp_yright) {
-    axedp_yright = svg.append("g");
-    rectdp_yright = axedp_yright.append("rect").attr("fill", rectfill);
-    midlinedp_yright = axedp_yleft.append("line").attr("stroke", "white").attr("stroke-width", 2);
-    axisdp_yright = axedp_yright.append("g");
-    dotg_yright = axedp_yright.append("g").selectAll().data(data.filter((d) => d.sampletypes[cfg.yrightsampletype])).enter().append("g");
-    circle_yright = dotg_yright.append("rect").attr("fill", (d) => d.color || ycolor).attr("fill-opacity", 0).attr("stroke", (d) => d.color || ycolor).attr("stroke-opacity", dotstrokeopacity).on("mouseover", (event, d) => mouseover(d, event.clientX, event.clientY)).on("mouseout", mouseout);
-  }
-  const axe_xdp = svg.append("g");
-  const rect_xdp = axe_xdp.append("rect").attr("fill", rectfill);
-  const midlinedp_x = axe_xdp.append("line").attr("stroke", "white").attr("stroke-width", 2);
-  const dplab = axe_xdp.append("text").text("Coverage").attr("text-anchor", "end").attr("dominant-baseline", "central").attr("font-family", font).attr("fill", gray);
-  const axis_xdp = axe_xdp.append("g");
-  const dotg_xdp = axe_xdp.append("g").selectAll().data(data).enter().append("g");
-  const circle_xdp = dotg_xdp.append("circle").attr("fill", (d) => d.color || xcolor).attr("fill-opacity", 0).attr("stroke", (d) => d.color || xcolor).attr("stroke-opacity", dotstrokeopacity).on("mouseover", (event, d) => mouseover(d, event.clientX, event.clientY)).on("mouseout", mouseout);
-  const plotg_center = svg.append("g");
-  const rect_center = plotg_center.append("rect").attr("fill", rectfill);
-  const midline_xcenter = plotg_center.append("line").attr("stroke", "white").attr("stroke-width", 2);
-  const midline_ycenter = plotg_center.append("line").attr("stroke", "white").attr("stroke-width", 2);
-  const dotg_center = plotg_center.append("g").selectAll().data(data).enter().append("g");
-  const circle_center = dotg_center.append("circle").attr("fill", (d) => d.color || centercolor).attr("fill-opacity", 0).attr("stroke", (d) => d.color || centercolor).attr("stroke-opacity", dotstrokeopacity).on("mouseover", (event, d) => mouseover(d, event.clientX, event.clientY)).on("mouseout", mouseout);
-  const render = () => {
-    xvafheight = ticksize + fontsize + 10 + fontsize * 2;
-    yvafwidth = ticksize + fontsize * 2 + 10 + fontsize * 2;
-    sp = radius * 2;
-    sp2 = ticksize + fontsize + radius + 10;
-    scalevaf_x.range([0, xwidth]);
-    scalevaf_y.range([0, -yheight]);
-    scaledp_x.range([0, xdpheight]);
-    if (scaledp_yleft) {
-      scaledp_yleft.range([0, -ydpheight]);
-    }
-    if (scaledp_yright) {
-      scaledp_yright.range([0, ydpheight]);
-    }
-    if (axevaf_yleft) {
-      axevaf_yleft.attr("transform", "translate(" + yvafwidth + "," + (toppad + yheight) + ")");
-      yleftlabg.attr("transform", "translate(-" + (yvafwidth - fontsize) + ",-" + yheight / 2 + ")");
-      yleftlab.attr("font-size", fontsize * 2);
-    }
-    if (axevaf_yright) {
-      axevaf_yright.attr(
-        "transform",
-        "translate(" + ((maxdp_yleft ? yvafwidth + sp + ydpheight : 0) + sp2 + xwidth + sp2 + ydpheight + sp) + "," + (toppad + yheight) + ")"
-      );
-      yrightlabg.attr("transform", "translate(" + (yvafwidth - fontsize) + ",-" + yheight / 2 + ")");
-      yrightlab.attr("font-size", fontsize * 2);
-    }
-    axe_xvaf.attr(
-      "transform",
-      "translate(" + (yvafwidth + sp + ydpheight + sp2) + "," + (toppad + yheight + sp2 + xdpheight + sp) + ")"
-    );
-    xlab.attr("font-size", fontsize * 2).attr("x", xwidth / 2).attr("y", xvafheight);
-    if (axedp_yleft) {
-      axedp_yleft.attr("transform", "translate(" + (yvafwidth + sp + ydpheight) + "," + (toppad + yheight) + ")");
-      axisdp_yleft.attr("transform", "translate(0," + (5 + radius) + ")");
-      rectdp_yleft.attr("x", -ydpheight).attr("y", -yheight).attr("width", ydpheight).attr("height", yheight);
-      midlinedp_yleft.attr("x1", -ydpheight).attr("y1", -yheight / 2).attr("y2", -yheight / 2);
-    }
-    if (axedp_yright) {
-      axedp_yright.attr(
-        "transform",
-        "translate(" + ((maxdp_yleft ? yvafwidth + sp + ydpheight : 0) + sp2 + xwidth + sp2) + "," + (toppad + yheight) + ")"
-      );
-      axisdp_yright.attr("transform", "translate(0," + (5 + radius) + ")");
-      rectdp_yright.attr("y", -yheight).attr("width", ydpheight).attr("height", yheight);
-      midlinedp_yright.attr("y1", -yheight / 2).attr("y2", -yheight / 2).attr("x2", ydpheight);
-    }
-    axe_xdp.attr("transform", "translate(" + (yvafwidth + sp + ydpheight + sp2) + "," + (toppad + yheight + sp2) + ")");
-    axis_xdp.attr("transform", "translate(-" + (5 + radius) + ",0)");
-    rect_xdp.attr("width", xwidth).attr("height", xdpheight);
-    midlinedp_x.attr("x1", xwidth / 2).attr("x2", xwidth / 2).attr("y2", xdpheight);
-    dplab.attr("x", -40).attr("y", xdpheight / 2).attr("font-size", fontsize * 1.5);
-    plotg_center.attr("transform", "translate(" + (yvafwidth + sp + ydpheight + sp2) + "," + (toppad + yheight) + ")");
-    rect_center.attr("y", -yheight).attr("width", xwidth).attr("height", yheight);
-    midline_xcenter.attr("y1", -yheight / 2).attr("y2", -yheight / 2).attr("x2", xwidth);
-    midline_ycenter.attr("x1", xwidth / 2).attr("x2", xwidth / 2).attr("y2", -yheight);
-    if (axisvaf_yleft) {
-      axisstyle({
-        axis: axisvaf_yleft.call(
-          axisLeft().scale(scalevaf_y).tickSize(ticksize - 2)
-        ),
-        showline: true,
-        color: gray,
-        fontsize
-      });
-    }
-    if (axisvaf_yright) {
-      axisstyle({
-        axis: axisvaf_yright.call(
-          axisRight().scale(scalevaf_y).tickSize(ticksize - 2)
-        ),
-        showline: true,
-        color: gray,
-        fontsize
-      });
-    }
-    axisstyle({
-      axis: axis_xvaf.call(
-        axisBottom().scale(scalevaf_x).tickSize(ticksize - 2)
-      ),
-      showline: true,
-      color: gray,
-      fontsize
-    });
-    axisstyle({
-      axis: axis_xdp.call(
-        axisLeft().scale(scaledp_x).tickSize(ticksize - 2).tickValues([0, maxdp_x])
-      ),
-      showline: true,
-      color: gray,
-      fontsize
-    });
-    if (axisdp_yleft) {
-      axisstyle({
-        axis: axisdp_yleft.call(
-          axisBottom().scale(scaledp_yleft).tickSize(ticksize - 2).tickValues([0, maxdp_yleft])
-        ),
-        showline: true,
-        color: gray,
-        fontsize
-      });
-    }
-    if (axisdp_yright) {
-      axisstyle({
-        axis: axisdp_yright.call(
-          axisBottom().scale(scaledp_yright).tickSize(ticksize - 2).tickValues([0, maxdp_yright])
-        ),
-        showline: true,
-        color: gray,
-        fontsize
-      });
-    }
-    if (dotg_yleft) {
-      dotg_yleft.attr("transform", (d) => {
-        const i = d.sampletypes[cfg.yleftsampletype];
-        return "translate(" + scaledp_yleft(i.total) + "," + scalevaf_y(i.vaf) + ")";
-      });
-    }
-    if (dotg_yright) {
-      dotg_yright.attr("transform", (d) => {
-        const i = d.sampletypes[cfg.yrightsampletype];
-        return "translate(" + scaledp_yright(i.total) + "," + scalevaf_y(i.vaf) + ")";
-      });
-    }
-    dotg_xdp.attr("transform", (d) => {
-      const i = d.sampletypes[cfg.xsampletype];
-      return "translate(" + scalevaf_x(i.vaf) + "," + scaledp_x(i.total) + ")";
-    });
-    dotg_center.attr("transform", (d) => {
-      const x = d.sampletypes[cfg.xsampletype];
-      const y = d.sampletypes[cfg.yleftsampletype] || d.sampletypes[cfg.yrightsampletype];
-      return "translate(" + scalevaf_x(x.vaf) + "," + scalevaf_y(y.vaf) + ")";
-    });
-    circle_xdp.attr("r", radius);
-    circle_center.attr("r", radius);
-    if (circle_yleft) {
-      circle_yleft.attr("r", radius);
-    }
-    if (circle_yright) {
-      circle_yright.attr("x", -radius).attr("y", -radius).attr("width", radius * 2).attr("height", radius * 2);
-    }
-    svg.attr(
-      "width",
-      (maxdp_yleft ? yvafwidth + sp + ydpheight : 0) + sp2 + xwidth + sp2 + (maxdp_yright ? ydpheight + sp + yvafwidth : 0)
-    ).attr("height", toppad + yheight + sp2 + xdpheight + sp + xvafheight);
-  };
-  render();
-}
-export {
-  plot_2dvaf as default
-};
-//# sourceMappingURL=plot.2dvaf-5OHUFTMK.js.map

package/dist/plot.app-XIVVJHWG.js

@@ -1,36 +0,0 @@
-import {
-  appInit
-} from "./chunk-CPIPN5F6.js";
-import "./chunk-MSSPT5YM.js";
-import "./chunk-X46YA4CB.js";
-import "./chunk-SKMFMGCD.js";
-import "./chunk-QJ3HYZH3.js";
-import "./chunk-HJ6L54YS.js";
-import "./chunk-KV4W2ACA.js";
-import "./chunk-DMWOK4DS.js";
-import "./chunk-ELJX3QIQ.js";
-import "./chunk-5IMFPVGT.js";
-import "./chunk-EEB5VE2A.js";
-import "./chunk-6RRZRISL.js";
-import "./chunk-2KM4PRQM.js";
-import "./chunk-VMRO6DMC.js";
-import "./chunk-HKKTNIMX.js";
-import "./chunk-GMRIEUBW.js";
-import "./chunk-4EZLVENZ.js";
-import "./chunk-WINIL2KN.js";
-import "./chunk-PF4DSFDR.js";
-import "./chunk-7X6NF7NI.js";
-import "./chunk-W5J3LTYS.js";
-import "./chunk-Z2ZITHT4.js";
-import "./chunk-4OLM3KSB.js";
-import "./chunk-FXQXCOII.js";
-import "./chunk-TLT4YIG3.js";
-import "./chunk-5R63Q5KH.js";
-import "./chunk-I6Y4O3RR.js";
-import "./chunk-Q5RDQNIT.js";
-import "./chunk-DQC5FFGV.js";
-import "./chunk-HS5PO5ZQ.js";
-export {
-  appInit
-};
-//# sourceMappingURL=plot.app-XIVVJHWG.js.map

package/dist/plot.barplot-PSODLAXD.js

@@ -1,97 +0,0 @@
-import {
-  axisstyle,
-  font,
-  newpane,
-  to_svg
-} from "./chunk-QJ3HYZH3.js";
-import "./chunk-HJ6L54YS.js";
-import "./chunk-KV4W2ACA.js";
-import "./chunk-DMWOK4DS.js";
-import "./chunk-ELJX3QIQ.js";
-import "./chunk-5IMFPVGT.js";
-import "./chunk-EEB5VE2A.js";
-import "./chunk-6RRZRISL.js";
-import "./chunk-2KM4PRQM.js";
-import "./chunk-VMRO6DMC.js";
-import "./chunk-HKKTNIMX.js";
-import "./chunk-GMRIEUBW.js";
-import "./chunk-4EZLVENZ.js";
-import "./chunk-WINIL2KN.js";
-import "./chunk-PF4DSFDR.js";
-import "./chunk-7X6NF7NI.js";
-import "./chunk-W5J3LTYS.js";
-import {
-  axisTop
-} from "./chunk-Z2ZITHT4.js";
-import {
-  format,
-  linear
-} from "./chunk-4OLM3KSB.js";
-import "./chunk-FXQXCOII.js";
-import "./chunk-TLT4YIG3.js";
-import "./chunk-5R63Q5KH.js";
-import "./chunk-I6Y4O3RR.js";
-import "./chunk-Q5RDQNIT.js";
-import "./chunk-DQC5FFGV.js";
-import "./chunk-HS5PO5ZQ.js";
-
-// src/old/plot.barplot.js
-function plot_barplot(data, barcolor, label, pos) {
-  const pane = newpane({ x: pos.left + 200, y: pos.top });
-  pane.body.style("padding", "10px");
-  pane.header.html(label);
-  data.sort((a, b) => b.size - a.size);
-  plot({
-    lst: data,
-    holder: pane.body,
-    barcolor,
-    limit: Math.min(data.length, 20)
-  });
-}
-function plot(p) {
-  p.holder.selectAll("*").remove();
-  const row = p.holder.append("div").style("margin-bottom", "10px");
-  row.append("button").text("more").on("click", () => {
-    p.limit = Math.min(p.lst.length, p.limit + 10);
-    plot(p);
-  });
-  row.append("button").text("less").on("click", () => {
-    p.limit = Math.max(1, p.limit - 10);
-    plot(p);
-  });
-  row.append("button").text("screenshot").on("click", () => to_svg(svg.node(), "barplot"));
-  let barheight = 20, barwidth = 300, space = 5, axisheight = barheight + 5, barspace = barheight / 8, maxlabelwidth = 0, maxvalue = 0;
-  const svg = p.holder.append("svg");
-  const axisg = svg.append("g");
-  for (let i = 0; i < p.limit; i++) {
-    let j = p.lst[i];
-    maxvalue = Math.max(maxvalue, j.size);
-    svg.append("text").text(j.name).attr("font-size", barheight - 2).attr("font-family", font).each(function() {
-      maxlabelwidth = Math.max(maxlabelwidth, this.getBBox().width);
-    }).remove();
-  }
-  svg.attr("width", maxlabelwidth + space + barwidth + space).attr("height", axisheight + space + p.limit * (barheight + barspace));
-  axisg.attr("transform", "translate(" + (maxlabelwidth + space) + "," + axisheight + ")").call(
-    axisTop().scale(
-      linear().domain([0, maxvalue]).range([0, barwidth])
-    ).tickFormat(format("d"))
-  );
-  axisstyle({
-    axis: axisg,
-    showline: true,
-    fontsize: barheight * 0.8,
-    color: "black"
-  });
-  let y = axisheight + space;
-  const sf = barwidth / maxvalue;
-  for (let i = 0; i < p.limit; i++) {
-    const j = p.lst[i];
-    svg.append("text").text(j.name).attr("x", maxlabelwidth).attr("y", y + barheight / 2).attr("text-anchor", "end").attr("font-size", barheight - 2).attr("font-family", font).attr("dominant-baseline", "central");
-    svg.append("rect").attr("x", maxlabelwidth + space).attr("y", y).attr("width", sf * j.size).attr("height", barheight - 1).attr("fill", p.barcolor);
-    y += barheight + barspace;
-  }
-}
-export {
-  plot_barplot as default
-};
-//# sourceMappingURL=plot.barplot-PSODLAXD.js.map

package/dist/plot.boxplot-W3ASYFOG.js

@@ -1,146 +0,0 @@
-import {
-  axisstyle,
-  font
-} from "./chunk-QJ3HYZH3.js";
-import "./chunk-HJ6L54YS.js";
-import "./chunk-KV4W2ACA.js";
-import "./chunk-DMWOK4DS.js";
-import "./chunk-ELJX3QIQ.js";
-import "./chunk-5IMFPVGT.js";
-import "./chunk-EEB5VE2A.js";
-import "./chunk-6RRZRISL.js";
-import "./chunk-2KM4PRQM.js";
-import "./chunk-VMRO6DMC.js";
-import "./chunk-HKKTNIMX.js";
-import "./chunk-GMRIEUBW.js";
-import "./chunk-4EZLVENZ.js";
-import "./chunk-WINIL2KN.js";
-import "./chunk-PF4DSFDR.js";
-import "./chunk-7X6NF7NI.js";
-import "./chunk-W5J3LTYS.js";
-import {
-  axisTop,
-  category10_default
-} from "./chunk-Z2ZITHT4.js";
-import {
-  linear,
-  ordinal
-} from "./chunk-4OLM3KSB.js";
-import "./chunk-FXQXCOII.js";
-import "./chunk-TLT4YIG3.js";
-import "./chunk-5R63Q5KH.js";
-import "./chunk-I6Y4O3RR.js";
-import "./chunk-Q5RDQNIT.js";
-import "./chunk-DQC5FFGV.js";
-import "./chunk-HS5PO5ZQ.js";
-
-// src/old/plot.boxplot.js
-function plot_boxplot_default(arg) {
-  if (!arg.holder) return ".holder missing for boxplot";
-  if (!arg.list) return ".list[] missing";
-  if (!Array.isArray(arg.list)) return ".list should be array";
-  for (const group of arg.list) {
-    if (!group.label) return ".label missing for a group";
-    if (group.samples) {
-      for (const s of group.samples) {
-        if (!Number.isFinite(s.value)) return ".value missing from a sample";
-      }
-    } else {
-      if (!Number.isFinite(group.minvalue)) return ".minvalue missing for a group";
-      if (!Number.isFinite(group.maxvalue)) return ".maxvalue missing for a group";
-      if (!group.percentile) return ".percentile{} missing from a group";
-      if (!Number.isFinite(group.percentile.p05)) return ".percentile.p05 missing for a group";
-      if (!Number.isFinite(group.percentile.p25)) return ".percentile.p25 missing for a group";
-      if (!Number.isFinite(group.percentile.p50)) return ".percentile.p50 missing for a group";
-      if (!Number.isFinite(group.percentile.p75)) return ".percentile.p75 missing for a group";
-      if (!Number.isFinite(group.percentile.p95)) return ".percentile.p95 missing for a group";
-    }
-  }
-  const label2color = ordinal(category10_default);
-  const svg = arg.holder.append("svg");
-  let axisheight = 40, width = 300, ypad = 10, xpad = 10, boxheight = 30, axisfontsize = 12, fontsize = 15;
-  let maxlabelw = 0;
-  let minv = null;
-  let maxv = null;
-  for (const g2 of arg.list) {
-    const samplecount = g2.samplecount ? g2.samplecount : g2.samples ? g2.samples.length : null;
-    svg.append("text").text(g2.label + (samplecount ? " (n=" + samplecount + ")" : "")).attr("font-family", font).attr("font-size", fontsize).each(function() {
-      maxlabelw = Math.max(maxlabelw, this.getBBox().width);
-    }).remove();
-    if (g2.samples) {
-      for (const s of g2.samples) {
-        if (s.value == void 0) continue;
-        if (minv == null) {
-          minv = s.value;
-          maxv = s.value;
-        } else {
-          minv = Math.min(minv, s.value);
-          maxv = Math.max(maxv, s.value);
-        }
-      }
-    } else {
-      if (minv == null) {
-        minv = g2.minvalue;
-        maxv = g2.maxvalue;
-      } else {
-        minv = Math.min(minv, g2.minvalue);
-        maxv = Math.max(maxv, g2.maxvalue);
-      }
-    }
-  }
-  svg.attr("width", maxlabelw + xpad + width + xpad).attr("height", axisheight + (ypad + boxheight) * arg.list.length + 10);
-  const g = svg.append("g").attr("transform", "translate(" + (maxlabelw + xpad) + "," + axisheight + ")");
-  const xscale = linear().domain([minv, maxv]).range([0, width]);
-  const axisg = g.append("g");
-  axisstyle({
-    axis: axisg.call(
-      axisTop().scale(xscale).ticks(5)
-    ),
-    showline: true,
-    fontsize: axisfontsize,
-    color: "black"
-  });
-  if (arg.axislabel) {
-    g.append("text").text(arg.axislabel).attr("x", width / 2).attr("y", -axisfontsize - 13).attr("font-family", font).attr("font-size", fontsize).attr("text-anchor", "middle");
-  }
-  let y = 0;
-  for (const grp of arg.list) {
-    y += ypad;
-    const sg = g.append("g").attr("transform", "translate(0," + y + ")");
-    y += boxheight;
-    const samplecount = grp.samplecount ? grp.samplecount : grp.samples ? grp.samples.length : null;
-    sg.append("text").text(grp.label + (samplecount ? " (n=" + samplecount + ")" : "")).attr("x", -xpad).attr("y", boxheight / 2).attr("text-anchor", "end").attr("dominant-baseline", "central").attr("font-family", font).attr("font-size", fontsize).attr("fill", "black");
-    let p05, p25, p50, p75, p95;
-    if (grp.samples) {
-      const vlst = grp.samples.map((i) => i.value);
-      vlst.sort((a, b) => a - b);
-      p05 = vlst[Math.floor(vlst.length * 0.05)];
-      p25 = vlst[Math.floor(vlst.length * 0.25)];
-      p50 = vlst[Math.floor(vlst.length * 0.5)];
-      p75 = vlst[Math.floor(vlst.length * 0.75)];
-      p95 = vlst[Math.floor(vlst.length * 0.95)];
-    } else {
-      p05 = grp.percentile.p05;
-      p25 = grp.percentile.p25;
-      p50 = grp.percentile.p50;
-      p75 = grp.percentile.p75;
-      p95 = grp.percentile.p95;
-    }
-    const x05 = xscale(p05);
-    const x25 = xscale(p25);
-    const x50 = xscale(p50);
-    const x75 = xscale(p75);
-    const x95 = xscale(p95);
-    const color = grp.color || label2color(grp.label);
-    sg.append("line").attr("y1", boxheight / 2).attr("y2", boxheight / 2).attr("x1", x05).attr("x2", x95).attr("stroke", color).attr("shape-rendering", "crispEdges");
-    sg.append("line").attr("y2", boxheight).attr("x1", x05).attr("x2", x05).attr("stroke", color).attr("shape-rendering", "crispEdges");
-    sg.append("line").attr("y2", boxheight).attr("x1", x95).attr("x2", x95).attr("stroke", color).attr("shape-rendering", "crispEdges");
-    sg.append("rect").attr("x", x25).attr("width", x75 - x25).attr("height", boxheight).attr("stroke", color).attr("fill", "white").attr("shape-rendering", "crispEdges");
-    sg.append("line").attr("y2", boxheight).attr("x1", x50).attr("x2", x50).attr("stroke", color).attr("shape-rendering", "crispEdges");
-  }
-  return null;
-}
-export {
-  plot_boxplot_default as default
-};
-//# sourceMappingURL=plot.boxplot-W3ASYFOG.js.map