@sjcrh/proteinpaint-client 2.190.2 → 2.191.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/2dmaf-3D2KTSAN.js +1373 -0
- package/dist/AIProjectAdmin-IGPLMREH.js +829 -0
- package/dist/AppHeader-WT5AXGLC.js +835 -0
- package/dist/BoxPlot-AUFITBDB.js +1217 -0
- package/dist/CorrelationVolcano-4AZ6Y42O.js +619 -0
- package/dist/DE-MWYRMM47.js +95 -0
- package/dist/DEinput-F3JFK4HF.js +301 -0
- package/dist/DifferentialAnalysis-ZAVYUYOL.js +245 -0
- package/dist/Disco-Q3O3A2CU.js +3237 -0
- package/dist/Disco.UI-QIKPQKTY.js +245 -0
- package/dist/DmrPlot-D7TPJXWH.js +642 -0
- package/dist/GB-K57ZGFLA.js +1130 -0
- package/dist/GeneExpInput-7UYFJHSX.js +366 -0
- package/dist/HicApp-HPIHJDLQ.js +2250 -0
- package/dist/NumBinaryEditor-ENHACYTK.js +270 -0
- package/dist/NumBinaryEditor.unit.spec-TNIRFCTU.js +286 -0
- package/dist/NumContEditor-Y4CDFJM2.js +107 -0
- package/dist/NumContEditor.unit.spec-KES6AJHN.js +169 -0
- package/dist/NumCustomBinEditor-TRXZ52MH.js +38 -0
- package/dist/NumCustomBinEditor.unit.spec-2V5X5YK4.js +284 -0
- package/dist/NumDiscreteEditor-RXXL3AQ4.js +179 -0
- package/dist/NumDiscreteEditor.unit.spec-EAFEI66P.js +202 -0
- package/dist/NumRegularBinEditor-KHIFP2L7.js +38 -0
- package/dist/NumRegularBinEditor.unit.spec-ADRNCEAV.js +227 -0
- package/dist/NumSplineEditor-33SUCGNJ.js +197 -0
- package/dist/NumSplineEditor.unit.spec-7KTMNABP.js +199 -0
- package/dist/NumericDensity-PWWJBZUA.js +38 -0
- package/dist/NumericDensity.unit.spec-V5C43FCP.js +221 -0
- package/dist/NumericHandler-A6QSQAPT.js +39 -0
- package/dist/NumericHandler.unit.spec-SRFEDFCC.js +219 -0
- package/dist/ProteomeInput-BOI2634T.js +396 -0
- package/dist/RunChart2-DJNWYZ5C.js +758 -0
- package/dist/SC-ADKHO4MP.js +936 -0
- package/dist/Volcano-4GJU2666.js +1379 -0
- package/dist/WSIViewer-JQKGSN3D.js +48475 -0
- package/dist/WsiSamplesPlot-PSVYIYI7.js +165 -0
- package/dist/adSandbox-AFYF5ULQ.js +38 -0
- package/dist/app-5KDQSFDE.js +49 -0
- package/dist/app-PZ5KGBCR.js +37 -0
- package/dist/app.js +13 -13
- package/dist/bam-AYX4HVPY.js +860 -0
- package/dist/barchart-2BMDZGPJ.js +47 -0
- package/dist/barchart.data-I33D7SQC.js +22 -0
- package/dist/barchart.events-Z5AL6NU6.js +47 -0
- package/dist/barchart.integration.spec-JG7OWI6G.js +1974 -0
- package/dist/barchart.integration.spec-JG7OWI6G.js.map +7 -0
- package/dist/barchart2-KFMUPMVS.js +311 -0
- package/dist/block-7UW7QCRX.js +6202 -0
- package/dist/block.init-CZWCEEID.js +38 -0
- package/dist/block.mds.expressionrank-2JJYKI2C.js +359 -0
- package/dist/block.mds.geneboxplot-NU45ZP4J.js +828 -0
- package/dist/block.mds.junction-UVSKHUFR.js +1545 -0
- package/dist/block.mds.svcnv-6JXI63CC.js +6801 -0
- package/dist/block.svg-KAMDKUQX.js +164 -0
- package/dist/block.tk.aicheck-WEKHCRXC.js +283 -0
- package/dist/block.tk.ase-MGDGSUQN.js +365 -0
- package/dist/block.tk.bam-MB2DAFD7.js +1906 -0
- package/dist/block.tk.bedgraphdot-VUSURZ6N.js +384 -0
- package/dist/block.tk.bigwig.ui-WQTN44VK.js +212 -0
- package/dist/block.tk.hicstraw-T2JXNKWD.js +823 -0
- package/dist/block.tk.junction-2JXABLIG.js +2364 -0
- package/dist/block.tk.junction.textmatrixui-EEB3JUNU.js +199 -0
- package/dist/block.tk.ld-JZBL73US.js +99 -0
- package/dist/block.tk.menu-VQEPTCE6.js +1029 -0
- package/dist/block.tk.pgv-PYOPQDYL.js +944 -0
- package/dist/brainImaging-SYJZZN3K.js +423 -0
- package/dist/chunk-26XX7RVV.js +129 -0
- package/dist/chunk-2QWELHBX.js +54 -0
- package/dist/chunk-3MGF2FZ2.js +1179 -0
- package/dist/chunk-3S7ZWGND.js +95 -0
- package/dist/chunk-4VCBJC3B.js +203 -0
- package/dist/chunk-53WLN75I.js +50 -0
- package/dist/chunk-5GOZWJ7S.js +263 -0
- package/dist/chunk-5WKIMNGG.js +148 -0
- package/dist/chunk-5WM3CC5O.js +117 -0
- package/dist/chunk-6FF5VLGO.js +20745 -0
- package/dist/chunk-6FF5VLGO.js.map +7 -0
- package/dist/chunk-6FOKZFIT.js +613 -0
- package/dist/chunk-6FOKZFIT.js.map +7 -0
- package/dist/chunk-6GI6MDYV.js +1210 -0
- package/dist/chunk-6XOZ4DWL.js +222 -0
- package/dist/chunk-6XOZ4DWL.js.map +7 -0
- package/dist/chunk-7BOPMRFX.js +482 -0
- package/dist/chunk-7C76SLOH.js +1275 -0
- package/dist/chunk-7C76SLOH.js.map +7 -0
- package/dist/chunk-BYOIIMNZ.js +2327 -0
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- package/dist/chunk-JTMU3F2Q.js +184 -0
- package/dist/chunk-JTMU3F2Q.js.map +7 -0
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- package/dist/chunk-QMI2X23H.js +339 -0
- package/dist/chunk-QOE7MB4X.js +454 -0
- package/dist/chunk-QSMU6K5D.js +34 -0
- package/dist/chunk-RBIBHQTL.js +54 -0
- package/dist/chunk-RG5ABFA2.js +368 -0
- package/dist/chunk-RRJGFE2S.js +407 -0
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- package/dist/chunk-T2CG7BVN.js +205 -0
- package/dist/chunk-TVADJLMF.js +317 -0
- package/dist/chunk-TVADJLMF.js.map +7 -0
- package/dist/chunk-U3DKYKV7.js +293 -0
- package/dist/chunk-UQHM3F6B.js +37 -0
- package/dist/chunk-VXKO2ONI.js +534 -0
- package/dist/chunk-W3MCIBAP.js +272 -0
- package/dist/chunk-WH236OZ6.js +736 -0
- package/dist/chunk-WMELUFVS.js +254 -0
- package/dist/chunk-WS3NUPNV.js +119 -0
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- package/dist/chunk-YRQ5V7DQ.js +302 -0
- package/dist/chunk-ZK226W6V.js +194 -0
- package/dist/chunk-ZTOABVVA.js +55 -0
- package/dist/chunk-ZUTPAYSS.js +477 -0
- package/dist/condition-SZZS77TK.js +332 -0
- package/dist/controls-ZBDTHWOT.js +41 -0
- package/dist/controls.config-MTBN2XPW.js +39 -0
- package/dist/correlation-DHEH5FT4.js +99 -0
- package/dist/cuminc-TM3SMOJ2.js +1149 -0
- package/dist/cuminc.integration.spec-NEBXRMKB.js +678 -0
- package/dist/customdata.inputui-5ZEKFWYV.js +289 -0
- package/dist/dataDownload-XZ4AC6QY.js +330 -0
- package/dist/dataDownload.integration.spec-O4YQKAOJ.js +193 -0
- package/dist/databrowser.ui-V4HQMZ4X.js +433 -0
- package/dist/dictionary-RAHC3OA7.js +111 -0
- package/dist/dnaMethylation-ZUHHG7Q2.js +38 -0
- package/dist/dnaMethylation.integration.spec-JZ6ZSF5L.js +203 -0
- package/dist/dofetch-77N4NDDM.js +51 -0
- package/dist/e2pca-K7IFKNTZ.js +350 -0
- package/dist/ep-4OIFIMZH.js +1256 -0
- package/dist/expclust.gdc.spec-OJD7ENKA.js +307 -0
- package/dist/facet-SZAF3QW6.js +521 -0
- package/dist/forms2-TBRF2RI5.js +534 -0
- package/dist/gb-I5J74SHP.js +88 -0
- package/dist/geneExpClustering-OSS4OCN6.js +249 -0
- package/dist/geneExpression-IHVMJGOG.js +38 -0
- package/dist/geneExpression-WKYVSE45.js +313 -0
- package/dist/geneExpression.unit.spec-QP6CLYHP.js +102 -0
- package/dist/geneORA-65PHOTHN.js +278 -0
- package/dist/geneRanking-XCU3NX4J.js +551 -0
- package/dist/geneVariant-CZM3XP7X.js +39 -0
- package/dist/geneVariant-IMDFPV2L.js +41 -0
- package/dist/geneVariant.integration.spec-FOONVTYD.js +198 -0
- package/dist/genefusion.ui-UZM2YGIR.js +309 -0
- package/dist/geneset-IGG77MNZ.js +208 -0
- package/dist/genomeBrowser.spec-CN2XNZQF.js +281 -0
- package/dist/grin2-367QGSOU.js +1560 -0
- package/dist/grin2-S46IRWIP.js +821 -0
- package/dist/grin2-S46IRWIP.js.map +7 -0
- package/dist/gsea-RJ767G5U.js +47 -0
- package/dist/hierCluster-3D425AUU.js +63 -0
- package/dist/hierCluster-GIIB6OEC.js +59 -0
- package/dist/hierCluster.config-ENEOWYOS.js +40 -0
- package/dist/hierCluster.integration.spec-IOA3PVAN.js +395 -0
- package/dist/hierCluster.interactivity-VITUF5RM.js +54 -0
- package/dist/hierCluster.renderers-G3274UYA.js +21 -0
- package/dist/imagePlot-7VH7VFWD.js +163 -0
- package/dist/importPlot-OKOYX2NU.js +8 -0
- package/dist/isoformExpression-4SJQZFLP.js +40 -0
- package/dist/isoformExpression.unit.spec-3MQQZEPZ.js +208 -0
- package/dist/launch.adhoc-MQKVVUV7.js +42 -0
- package/dist/leftlabel.sample-JPE6CXZU.js +260 -0
- package/dist/lollipop-DMM3QYKI.js +171 -0
- package/dist/maf-TQKKVLNR.js +452 -0
- package/dist/maftimeline-BXBAXKAI.js +593 -0
- package/dist/matrix-AWVEEUKZ.js +58 -0
- package/dist/matrix-N3YUJXLP.js +63 -0
- package/dist/matrix.cells-E3LEVA7U.js +28 -0
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- package/dist/matrix.groups-BGMZZ6CM.js +27 -0
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- package/dist/matrix.interactivity-LKLF5ZQN.js +42 -0
- package/dist/matrix.layout-ORYBQUKT.js +44 -0
- package/dist/matrix.legend-RJAFOZHQ.js +22 -0
- package/dist/matrix.renderers-TLZSYHZR.js +38 -0
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- package/dist/mds.fimo-MHPHQB4X.js +518 -0
- package/dist/mds.samplescatterplot-LRL5SXJ5.js +1550 -0
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- package/dist/numericDictTermCluster-OMXIURRD.js +72 -0
- package/dist/oncomatrix-FA3ELKNE.js +295 -0
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- package/dist/polar2-WABGZYEV.js +226 -0
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- package/dist/profileForms-LYWVFIVQ.js +441 -0
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- package/dist/proteinView-ATZI5LXA.js +1320 -0
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- package/dist/qualitative-VNY32ONL.js +43 -0
- package/dist/radar2-YVHLSCAM.js +321 -0
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- /package/dist/{summary.integration.spec-54HA7BC2.js.map → summary.integration.spec-KJPNP7X2.js.map} +0 -0
- /package/dist/{summaryInput-4RLZT6RW.js.map → summaryInput-47JBGPNE.js.map} +0 -0
- /package/dist/{sunburst-SMKD45XD.js.map → sunburst-PUZYZZGK.js.map} +0 -0
- /package/dist/{survival-YQNA3WP7.js.map → survival-LGJBYXFR.js.map} +0 -0
- /package/dist/{survival-BAW5ME6J.js.map → survival-SMOKVDGO.js.map} +0 -0
- /package/dist/{survival.integration.spec-2AHXNMH2.js.map → survival.integration.spec-ORC3LCVK.js.map} +0 -0
- /package/dist/{svgraph-5Z7VAIVR.js.map → svgraph-GWDKHIDQ.js.map} +0 -0
- /package/dist/{svmr-PHD76RV4.js.map → svmr-RRA6OUVP.js.map} +0 -0
- /package/dist/{table-GMRAOIWZ.js.map → table-AC2DX55F.js.map} +0 -0
- /package/dist/{termCollection-MEBY34TJ.js.map → termCollection-4OVZAKYZ.js.map} +0 -0
- /package/dist/{termCollection-QLKTRXUR.js.map → termCollection-MPFFNNMF.js.map} +0 -0
- /package/dist/{termCollection.unit.spec-6B53SW2Q.js.map → termCollection.unit.spec-S4QSTY4S.js.map} +0 -0
- /package/dist/{tk-X46SEOL7.js.map → tk-PFWI2HAC.js.map} +0 -0
- /package/dist/{tp.ui-XV7CL7CA.js.map → tp.ui-TKAJ7DRO.js.map} +0 -0
- /package/dist/{tvs.dt-U6SIZTXW.js.map → tvs.dt-6NDINORK.js.map} +0 -0
- /package/dist/{tvs.dtcnv.categorical-6YGEKMHW.js.map → tvs.dtcnv.categorical-2RHUN643.js.map} +0 -0
- /package/dist/{tvs.dtcnv.continuous-CQFEENBO.js.map → tvs.dtcnv.continuous-GIPVPDBD.js.map} +0 -0
- /package/dist/{tvs.dtfusion-NOBT2JPI.js.map → tvs.dtfusion-ZLXTZ7SA.js.map} +0 -0
- /package/dist/{tvs.dtsnvindel-6GTCSVAV.js.map → tvs.dtsnvindel-CRS5CL42.js.map} +0 -0
- /package/dist/{tvs.dtsv-PMI4YVI5.js.map → tvs.dtsv-SG45TZWQ.js.map} +0 -0
- /package/dist/{tvs.samplelst-HVNYKHXG.js.map → tvs.samplelst-NQ5BKEGM.js.map} +0 -0
- /package/dist/{tvs.termCollection-EWGTT75Z.js.map → tvs.termCollection-HOVUO7ZH.js.map} +0 -0
- /package/dist/{violin-MKWRB25Z.js.map → violin-FGGULOXU.js.map} +0 -0
- /package/dist/{violin.integration.spec-CNWJ43SD.js.map → violin.integration.spec-T5Y6URJK.js.map} +0 -0
- /package/dist/{violin.interactivity-UXOMTGSD.js.map → violin.interactivity-6RGFTQDW.js.map} +0 -0
- /package/dist/{violin.renderer-67Q6YGYQ.js.map → violin.renderer-63UTDZVK.js.map} +0 -0
- /package/dist/{vocabulary-AKXE7SNU.js.map → vocabulary-YQXR4H5J.js.map} +0 -0
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select_default
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// plots/table.js
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var TdbTable = class _TdbTable {
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static type = "table";
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constructor(opts) {
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this.type = _TdbTable.type;
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}
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async init() {
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const opts = this.opts;
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const controls = opts.controls ? null : opts.holder.append("div");
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const holder = opts.controls ? opts.holder : opts.holder.append("div");
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this.dom = {
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controls,
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holder,
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inputs: ["term1", "overlay"]
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setInteractivity(this);
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}
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async main() {
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try {
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this.config = structuredClone(this.state.config);
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if (this.dom.header) this.dom.header.html(c.term.term.name + " vs " + c.term2.term.name);
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getDataRequestOpts() {
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function setInteractivity(self) {
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a.download = self.config.term.term.name + " table.txt";
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function setRenderers(self) {
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const table = self.dom.div.append("table").style("margin-right", "20px").style("border-spacing", "3px").style("border-collapse", "collapse").style("border", "1px solid black");
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tr.append("td");
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for (const value of columns) {
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tr.append("th").text(label.length > 20 ? label.slice(0, 16) + "..." : label).attr("aria-label", label).style("border", "1px solid black").style("padding", "3px").style("text-align", "center").style("min-width", "80px").style("max-width", "150px").style("word-break", label.length > 12 ? "break-word" : "normal").style("vertical-align", "top");
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}
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let i = 0;
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for (const t1v of rows) {
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const tr2 = table.append("tr").style("background-color", i++ % 2 == 0 ? "#fff" : "#ececec");
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tr2.append("th").text(t1v.label.length > 20 ? t1v.label.slice(0, 20) + "..." : t1v.label).attr("aria-label", t1v.label).style("border", "1px solid black").style("padding", "3px").style("word-break", t1v.label.length > 12 ? "break-all" : "normal");
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const td = tr2.append("td").style("border", "1px solid black").style("padding", "3px 5px").style("text-align", "center");
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}
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}
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};
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}
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var tableInit = getCompInit(TdbTable);
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export {
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tableInit
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};
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//# sourceMappingURL=table-GMRAOIWZ.js.map
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renderTable
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// termsetting/handlers/termCollection.ts
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var TermCollectionHandler = class extends HandlerBase {
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//main menu dom elements before drag and drop divs are added
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async showEditMenu(div) {
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div.append("div").append("div").style("float", "right").style("padding", "6px 20px").append("button").attr("class", "sjpp_apply_btn sja_filter_tag_btn").text("Apply").on("click", callback);
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getPillStatus() {
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const selectedRows = terms.map((term, index) => self.term.termlst.find((t) => t.id === term.id) ? index : -1).filter((index) => index !== -1);
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|
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selectedRows,
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|
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columnButtons: void 0,
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|
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|
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}
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|
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function addCategoricalTable(self, div, terms, noButtonCallback) {
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}
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const selectedRows = terms.map((term, index) => self.term.termlst.find((t) => t.id === term.id) ? index : -1).filter((index) => index !== -1);
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const columns = [{ label: "VARIABLES" }];
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renderTable({
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showHeader: true,
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|
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columnButtons: void 0,
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});
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const categoryDiv = div.append("div").style("margin-top", "15px");
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const values = Object.assign({}, ...self.tw.term.termlst?.map((t) => t.values || {}) ?? []);
|
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|
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|
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const ckSource = self.tw.q.categoryKeys || self.tw.term.categoryKeys || [];
|
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|
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renderTable({
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|
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columns: [{ label: "CATEGORIES" }],
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return [{ value: values[ck.key]?.label ?? ck.key, checked: ck.shown }];
|
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}),
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|
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maxWidth: "30vw",
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|
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maxHeight: "40vh",
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|
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noButtonCallback: () => {
|
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|
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},
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|
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// FIXME to supply a real callback
|
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|
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striped: false,
|
|
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|
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showHeader: true,
|
|
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|
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//false,
|
|
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|
-
selectAll: true,
|
|
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|
-
columnButtons: void 0,
|
|
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|
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//Leave until table.js is typed
|
|
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|
-
buttons: void 0
|
|
154
|
-
});
|
|
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|
-
return () => {
|
|
156
|
-
const trs = div.select("table").select("tbody").node().querySelectorAll("tr");
|
|
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|
-
self.term.termlst = terms.filter((term, i) => {
|
|
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|
-
const checked = trs[i].querySelectorAll("td")[1].querySelector("input")?.checked;
|
|
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|
-
return checked === true;
|
|
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|
-
});
|
|
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|
-
const catTrs = categoryTable.select("table").select("tbody").node().querySelectorAll("tr");
|
|
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|
-
self.q.categoryKeys = ckSource.map((ck, i) => {
|
|
163
|
-
const checked = catTrs[i].querySelectorAll("td")[1].querySelector("input")?.checked;
|
|
164
|
-
return { key: ck.key, shown: !!checked };
|
|
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|
-
});
|
|
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|
-
self.api.runCallback();
|
|
167
|
-
};
|
|
168
|
-
}
|
|
169
|
-
function fillTW(tw) {
|
|
170
|
-
if (!tw.type) tw.type = "termCollection";
|
|
171
|
-
if (!tw.q) tw.q = { mode: "continuous", type: "compositePercentage" };
|
|
172
|
-
else tw.q.mode = "continuous";
|
|
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|
-
return tw;
|
|
174
|
-
}
|
|
175
|
-
export {
|
|
176
|
-
TermCollectionHandler,
|
|
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|
-
fillTW
|
|
178
|
-
};
|
|
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|
-
//# sourceMappingURL=termCollection-MEBY34TJ.js.map
|
|
@@ -1,38 +0,0 @@
|
|
|
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|
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import {
|
|
2
|
-
SearchHandler
|
|
3
|
-
} from "./chunk-5ITQVR2P.js";
|
|
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|
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import "./chunk-UK3PTE3P.js";
|
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import "./chunk-JNITUVXP.js";
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import "./chunk-OAWQ6LOO.js";
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import "./chunk-TLT4YIG3.js";
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import "./chunk-KYBIQBXE.js";
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import "./chunk-I6Y4O3RR.js";
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import "./chunk-OMR2DT66.js";
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|
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import "./chunk-DQC5FFGV.js";
|
|
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|
-
import "./chunk-HFNDKYVF.js";
|
|
35
|
-
export {
|
|
36
|
-
SearchHandler
|
|
37
|
-
};
|
|
38
|
-
//# sourceMappingURL=termCollection-QLKTRXUR.js.map
|
|
@@ -1,208 +0,0 @@
|
|
|
1
|
-
import {
|
|
2
|
-
SearchHandler
|
|
3
|
-
} from "./chunk-5ITQVR2P.js";
|
|
4
|
-
import {
|
|
5
|
-
require_tape
|
|
6
|
-
} from "./chunk-QWOE5YTB.js";
|
|
7
|
-
import "./chunk-UK3PTE3P.js";
|
|
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|
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import "./chunk-HJ6L54YS.js";
|
|
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|
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import "./chunk-LSEFWW72.js";
|
|
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|
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import "./chunk-IFA3COXY.js";
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|
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import "./chunk-HYOEWQ5P.js";
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|
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import "./chunk-HBW42TDT.js";
|
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13
|
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import "./chunk-G6O3URDN.js";
|
|
14
|
-
import "./chunk-FN5XPUPH.js";
|
|
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|
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import "./chunk-5X6J6UAT.js";
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|
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|
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import "./chunk-3L32ZXRS.js";
|
|
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|
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import "./chunk-GRNZWYOJ.js";
|
|
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|
-
import "./chunk-X27TRPIZ.js";
|
|
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|
-
import "./chunk-STQU7XZV.js";
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|
20
|
-
import "./chunk-7IYJZZQI.js";
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|
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|
-
import "./chunk-5V43Y2RC.js";
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|
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|
-
import "./chunk-PF4DSFDR.js";
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|
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|
-
import "./chunk-B4VRYXOQ.js";
|
|
24
|
-
import "./chunk-XOCO3LVN.js";
|
|
25
|
-
import "./chunk-EBKERML3.js";
|
|
26
|
-
import "./chunk-DD4R5P6W.js";
|
|
27
|
-
import "./chunk-JNITUVXP.js";
|
|
28
|
-
import "./chunk-KSGA62R2.js";
|
|
29
|
-
import "./chunk-LOZEKOES.js";
|
|
30
|
-
import "./chunk-TOU7EVFQ.js";
|
|
31
|
-
import "./chunk-OAWQ6LOO.js";
|
|
32
|
-
import "./chunk-TLT4YIG3.js";
|
|
33
|
-
import "./chunk-KYBIQBXE.js";
|
|
34
|
-
import {
|
|
35
|
-
select_default
|
|
36
|
-
} from "./chunk-I6Y4O3RR.js";
|
|
37
|
-
import "./chunk-OMR2DT66.js";
|
|
38
|
-
import "./chunk-DQC5FFGV.js";
|
|
39
|
-
import {
|
|
40
|
-
__toESM
|
|
41
|
-
} from "./chunk-HFNDKYVF.js";
|
|
42
|
-
|
|
43
|
-
// termdb/handlers/test/termCollection.unit.spec.ts
|
|
44
|
-
var import_tape = __toESM(require_tape(), 1);
|
|
45
|
-
function getHolder() {
|
|
46
|
-
return select_default("body").append("div");
|
|
47
|
-
}
|
|
48
|
-
function getTermCollectionDetails(overrides = {}) {
|
|
49
|
-
return {
|
|
50
|
-
name: "Test Collection",
|
|
51
|
-
type: "gene",
|
|
52
|
-
memberType: "gene",
|
|
53
|
-
termlst: [
|
|
54
|
-
{ id: "gene1", name: "TP53", values: { tissue: "Lung" } },
|
|
55
|
-
{ id: "gene2", name: "KRAS", values: { tissue: "Colon" } },
|
|
56
|
-
{ id: "gene3", name: "BRCA1", values: { tissue: "Breast" } }
|
|
57
|
-
],
|
|
58
|
-
categoryKeys: [
|
|
59
|
-
{ key: "tissue", shown: true },
|
|
60
|
-
{ key: "expression", shown: false }
|
|
61
|
-
],
|
|
62
|
-
propsByTermId: {
|
|
63
|
-
gene1: { color: "#FF0000" },
|
|
64
|
-
gene2: { color: "#00FF00" }
|
|
65
|
-
},
|
|
66
|
-
...overrides
|
|
67
|
-
};
|
|
68
|
-
}
|
|
69
|
-
(0, import_tape.default)("\n", function(test) {
|
|
70
|
-
test.comment("-***- termdb/handlers/termCollection -***-");
|
|
71
|
-
test.end();
|
|
72
|
-
});
|
|
73
|
-
(0, import_tape.default)("init() should render term list table with all terms from details.termlst", async (test) => {
|
|
74
|
-
const handler = new SearchHandler();
|
|
75
|
-
const holder = getHolder();
|
|
76
|
-
const details = getTermCollectionDetails();
|
|
77
|
-
await handler.init({
|
|
78
|
-
holder,
|
|
79
|
-
callback: () => {
|
|
80
|
-
},
|
|
81
|
-
app: {},
|
|
82
|
-
details
|
|
83
|
-
});
|
|
84
|
-
const table = holder.select("table");
|
|
85
|
-
test.ok(table.node(), "Should render a table");
|
|
86
|
-
const rows = table.selectAll("tbody tr");
|
|
87
|
-
test.equal(rows.size(), 3, "Should render three rows for three terms");
|
|
88
|
-
const rowTexts = rows.nodes().map((row) => row.textContent.trim());
|
|
89
|
-
test.ok(rowTexts[0].includes("TP53"), "First row should contain TP53");
|
|
90
|
-
test.ok(rowTexts[1].includes("KRAS"), "Second row should contain KRAS");
|
|
91
|
-
test.ok(rowTexts[2].includes("BRCA1"), "Third row should contain BRCA1");
|
|
92
|
-
if (test["_ok"]) holder.remove();
|
|
93
|
-
test.end();
|
|
94
|
-
});
|
|
95
|
-
(0, import_tape.default)("init() should render category table when details.categoryKeys is present", async (test) => {
|
|
96
|
-
const handler = new SearchHandler();
|
|
97
|
-
const holder = getHolder();
|
|
98
|
-
const details = getTermCollectionDetails();
|
|
99
|
-
await handler.init({
|
|
100
|
-
holder,
|
|
101
|
-
callback: () => {
|
|
102
|
-
},
|
|
103
|
-
app: {},
|
|
104
|
-
details
|
|
105
|
-
});
|
|
106
|
-
const tables = holder.selectAll("table");
|
|
107
|
-
test.equal(tables.size(), 2, "Should render two tables when categoryKeys is present");
|
|
108
|
-
const categoryTable = tables.nodes()[1];
|
|
109
|
-
const categoryRows = select_default(categoryTable).selectAll("tbody tr");
|
|
110
|
-
test.equal(categoryRows.size(), 2, "Should render two rows for two categories");
|
|
111
|
-
const categoryTexts = categoryRows.nodes().map((row) => row.textContent.trim());
|
|
112
|
-
test.ok(categoryTexts[0].includes("tissue"), "Should display tissue category key");
|
|
113
|
-
test.ok(categoryTexts[1].includes("expression"), "Should display expression category key");
|
|
114
|
-
if (test["_ok"]) holder.remove();
|
|
115
|
-
test.end();
|
|
116
|
-
});
|
|
117
|
-
(0, import_tape.default)("init() should call callback with selected terms, categoryKeys, and properties", async (test) => {
|
|
118
|
-
const handler = new SearchHandler();
|
|
119
|
-
const holder = getHolder();
|
|
120
|
-
const details = getTermCollectionDetails();
|
|
121
|
-
let callbackResult;
|
|
122
|
-
await handler.init({
|
|
123
|
-
holder,
|
|
124
|
-
callback: (result) => {
|
|
125
|
-
callbackResult = result;
|
|
126
|
-
},
|
|
127
|
-
app: {},
|
|
128
|
-
details
|
|
129
|
-
});
|
|
130
|
-
const termsTable = holder.selectAll("table").nodes()[0];
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const checkboxes = termsTable.querySelectorAll('tbody input[type="checkbox"]');
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checkboxes[0].checked = true;
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checkboxes[1].checked = true;
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checkboxes[2].checked = false;
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135
|
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const categoryTable = holder.selectAll("table").nodes()[1];
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136
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const categoryCheckboxes = categoryTable.querySelectorAll('tbody input[type="checkbox"]');
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|
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categoryCheckboxes[0].checked = true;
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|
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categoryCheckboxes[1].checked = false;
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|
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const selectBtn = holder.select("button.sjpp_apply_btn").node();
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|
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selectBtn.click();
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|
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|
-
test.equal(callbackResult?.type, "termCollection", "Should set type to termCollection");
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142
|
-
test.equal(callbackResult?.name, "Test Collection", "Should pass collection name");
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143
|
-
test.equal(callbackResult?.memberType, "gene", "Should pass memberType");
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|
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|
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test.deepEqual(callbackResult?.termIds, ["gene1", "gene2"], "Should pass selected term IDs");
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|
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|
-
test.equal(callbackResult?.termlst.length, 2, "Should pass selected term list with correct length");
|
|
146
|
-
test.equal(callbackResult?.termlst[0].name, "TP53", "First selected term should be TP53");
|
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147
|
-
test.equal(callbackResult?.termlst[1].name, "KRAS", "Second selected term should be KRAS");
|
|
148
|
-
test.deepEqual(
|
|
149
|
-
callbackResult?.categoryKeys,
|
|
150
|
-
[
|
|
151
|
-
{ key: "tissue", shown: true },
|
|
152
|
-
{ key: "expression", shown: false }
|
|
153
|
-
],
|
|
154
|
-
"Should pass updated categoryKeys with shown status"
|
|
155
|
-
);
|
|
156
|
-
test.deepEqual(
|
|
157
|
-
callbackResult?.propsByTermId,
|
|
158
|
-
{ gene1: { color: "#FF0000" }, gene2: { color: "#00FF00" } },
|
|
159
|
-
"Should pass propsByTermId for selected terms only"
|
|
160
|
-
);
|
|
161
|
-
if (test["_ok"]) holder.remove();
|
|
162
|
-
test.end();
|
|
163
|
-
});
|
|
164
|
-
(0, import_tape.default)("init() should not render category table when details.categoryKeys is missing", async (test) => {
|
|
165
|
-
const handler = new SearchHandler();
|
|
166
|
-
const holder = getHolder();
|
|
167
|
-
const details = getTermCollectionDetails({ categoryKeys: void 0 });
|
|
168
|
-
await handler.init({
|
|
169
|
-
holder,
|
|
170
|
-
callback: () => {
|
|
171
|
-
},
|
|
172
|
-
app: {},
|
|
173
|
-
details
|
|
174
|
-
});
|
|
175
|
-
const tables = holder.selectAll("table");
|
|
176
|
-
test.equal(tables.size(), 1, "Should render only one table when categoryKeys is missing");
|
|
177
|
-
if (test["_ok"]) holder.remove();
|
|
178
|
-
test.end();
|
|
179
|
-
});
|
|
180
|
-
(0, import_tape.default)("init() should show alert when no terms are selected", async (test) => {
|
|
181
|
-
const handler = new SearchHandler();
|
|
182
|
-
const holder = getHolder();
|
|
183
|
-
const details = getTermCollectionDetails();
|
|
184
|
-
let alertCalled = false;
|
|
185
|
-
const originalAlert = window.alert;
|
|
186
|
-
window.alert = () => {
|
|
187
|
-
alertCalled = true;
|
|
188
|
-
};
|
|
189
|
-
await handler.init({
|
|
190
|
-
holder,
|
|
191
|
-
callback: () => test.fail("Callback should not be called when no terms selected"),
|
|
192
|
-
app: {},
|
|
193
|
-
details
|
|
194
|
-
});
|
|
195
|
-
const termsTable = holder.selectAll("table").nodes()[0];
|
|
196
|
-
const checkboxes = termsTable.querySelectorAll('tbody input[type="checkbox"]');
|
|
197
|
-
for (const cb of checkboxes) {
|
|
198
|
-
;
|
|
199
|
-
cb.checked = false;
|
|
200
|
-
}
|
|
201
|
-
const selectBtn = holder.select("button.sjpp_apply_btn").node();
|
|
202
|
-
selectBtn.click();
|
|
203
|
-
test.ok(alertCalled, "Should show alert when no terms are selected");
|
|
204
|
-
window.alert = originalAlert;
|
|
205
|
-
if (test["_ok"]) holder.remove();
|
|
206
|
-
test.end();
|
|
207
|
-
});
|
|
208
|
-
//# sourceMappingURL=termCollection.unit.spec-6B53SW2Q.js.map
|
package/dist/tk-X46SEOL7.js
DELETED
|
@@ -1,46 +0,0 @@
|
|
|
1
|
-
import {
|
|
2
|
-
loadTk,
|
|
3
|
-
rangequery_rglst
|
|
4
|
-
} from "./chunk-5GMXV4VC.js";
|
|
5
|
-
import "./chunk-SKMFMGCD.js";
|
|
6
|
-
import "./chunk-OY4NTIUQ.js";
|
|
7
|
-
import "./chunk-7YWFO7CJ.js";
|
|
8
|
-
import "./chunk-V2OJLJSK.js";
|
|
9
|
-
import "./chunk-WKNI3HRQ.js";
|
|
10
|
-
import "./chunk-IWMWT7O7.js";
|
|
11
|
-
import "./chunk-UK3PTE3P.js";
|
|
12
|
-
import "./chunk-HJ6L54YS.js";
|
|
13
|
-
import "./chunk-LSEFWW72.js";
|
|
14
|
-
import "./chunk-IFA3COXY.js";
|
|
15
|
-
import "./chunk-HYOEWQ5P.js";
|
|
16
|
-
import "./chunk-HBW42TDT.js";
|
|
17
|
-
import "./chunk-G6O3URDN.js";
|
|
18
|
-
import "./chunk-FN5XPUPH.js";
|
|
19
|
-
import "./chunk-5X6J6UAT.js";
|
|
20
|
-
import "./chunk-3L32ZXRS.js";
|
|
21
|
-
import "./chunk-GRNZWYOJ.js";
|
|
22
|
-
import "./chunk-X27TRPIZ.js";
|
|
23
|
-
import "./chunk-STQU7XZV.js";
|
|
24
|
-
import "./chunk-7IYJZZQI.js";
|
|
25
|
-
import "./chunk-5V43Y2RC.js";
|
|
26
|
-
import "./chunk-PF4DSFDR.js";
|
|
27
|
-
import "./chunk-B4VRYXOQ.js";
|
|
28
|
-
import "./chunk-XOCO3LVN.js";
|
|
29
|
-
import "./chunk-EBKERML3.js";
|
|
30
|
-
import "./chunk-DD4R5P6W.js";
|
|
31
|
-
import "./chunk-JNITUVXP.js";
|
|
32
|
-
import "./chunk-KSGA62R2.js";
|
|
33
|
-
import "./chunk-LOZEKOES.js";
|
|
34
|
-
import "./chunk-TOU7EVFQ.js";
|
|
35
|
-
import "./chunk-OAWQ6LOO.js";
|
|
36
|
-
import "./chunk-TLT4YIG3.js";
|
|
37
|
-
import "./chunk-KYBIQBXE.js";
|
|
38
|
-
import "./chunk-I6Y4O3RR.js";
|
|
39
|
-
import "./chunk-OMR2DT66.js";
|
|
40
|
-
import "./chunk-DQC5FFGV.js";
|
|
41
|
-
import "./chunk-HFNDKYVF.js";
|
|
42
|
-
export {
|
|
43
|
-
loadTk,
|
|
44
|
-
rangequery_rglst
|
|
45
|
-
};
|
|
46
|
-
//# sourceMappingURL=tk-X46SEOL7.js.map
|