@sjcrh/proteinpaint-client 2.170.13 → 2.170.16

package/dist/{singlecell-QGKFM6CJ.js → singlecell-UTNWD2GA.js}

@@ -21,31 +21,31 @@ import {
 } from "./chunk-72PLI3GC.js";
 import {
   legend_newrow
-} from "./chunk-FYJDO2WJ.js";
+} from "./chunk-EAZI7WHA.js";
 import {
   schemeCategory20
 } from "./chunk-V2OJLJSK.js";
 import {
   findgenemodel_bysymbol,
   gene_searchbox
-} from "./chunk-23TOE33H.js";
-import "./chunk-NJKN6DAK.js";
+} from "./chunk-CSZ4ILMN.js";
+import "./chunk-2E3IOEPG.js";
 import {
   appear2 as appear,
   disappear2 as disappear,
   font,
   newpane,
   sayerror
-} from "./chunk-Y6OL4KUS.js";
+} from "./chunk-PAIFJRXC.js";
 import "./chunk-HJ6L54YS.js";
-import "./chunk-BUQ7S2O2.js";
+import "./chunk-OY63PKHC.js";
 import {
   Menu
 } from "./chunk-OGVY5ALW.js";
 import {
   dofetch,
   dofetch2
-} from "./chunk-TMFHJD3G.js";
+} from "./chunk-XKXTJHA7.js";
 import "./chunk-YJWWWCJ6.js";
 import "./chunk-6RC5V24O.js";
 import "./chunk-IQIXGTQV.js";
@@ -1564,4 +1564,4 @@ async function make_legend(arg, obj) {
 export {
   init
 };
-//# sourceMappingURL=singlecell-QGKFM6CJ.js.map
+//# sourceMappingURL=singlecell-UTNWD2GA.js.map

package/dist/{snp-6WCLJX44.js → snp-CQTEUFH6.js}

@@ -1,12 +1,12 @@
 import {
   addGeneSearchbox
-} from "./chunk-Y6OL4KUS.js";
+} from "./chunk-PAIFJRXC.js";
 import "./chunk-HJ6L54YS.js";
-import "./chunk-BUQ7S2O2.js";
+import "./chunk-OY63PKHC.js";
 import {
   Menu
 } from "./chunk-OGVY5ALW.js";
-import "./chunk-TMFHJD3G.js";
+import "./chunk-XKXTJHA7.js";
 import "./chunk-YJWWWCJ6.js";
 import "./chunk-6RC5V24O.js";
 import "./chunk-IQIXGTQV.js";
@@ -74,4 +74,4 @@ var SearchHandler = class {
 export {
   SearchHandler
 };
-//# sourceMappingURL=snp-6WCLJX44.js.map
+//# sourceMappingURL=snp-CQTEUFH6.js.map

package/dist/{snplocus-BQZ72QBQ.js → snplocus-KVUQ3I35.js}

@@ -7,11 +7,11 @@ import {
   addGeneSearchbox,
   filterInit,
   getNormalRoot
-} from "./chunk-Y6OL4KUS.js";
+} from "./chunk-PAIFJRXC.js";
 import "./chunk-HJ6L54YS.js";
-import "./chunk-BUQ7S2O2.js";
+import "./chunk-OY63PKHC.js";
 import "./chunk-OGVY5ALW.js";
-import "./chunk-TMFHJD3G.js";
+import "./chunk-XKXTJHA7.js";
 import "./chunk-YJWWWCJ6.js";
 import "./chunk-6RC5V24O.js";
 import "./chunk-IQIXGTQV.js";
@@ -200,4 +200,4 @@ export {
   fillTW,
   getHandler
 };
-//# sourceMappingURL=snplocus-BQZ72QBQ.js.map
+//# sourceMappingURL=snplocus-KVUQ3I35.js.map

package/dist/{spliceevent.a53ss.diagram-3EGT2GQA.js → spliceevent.a53ss.diagram-JMAVS3KG.js}

@@ -1,10 +1,10 @@
 import {
   font
-} from "./chunk-Y6OL4KUS.js";
+} from "./chunk-PAIFJRXC.js";
 import "./chunk-HJ6L54YS.js";
-import "./chunk-BUQ7S2O2.js";
+import "./chunk-OY63PKHC.js";
 import "./chunk-OGVY5ALW.js";
-import "./chunk-TMFHJD3G.js";
+import "./chunk-XKXTJHA7.js";
 import "./chunk-YJWWWCJ6.js";
 import {
   IN_frame,
@@ -143,4 +143,4 @@ function spliceevent_a53ss_diagram_default(arg) {
 export {
   spliceevent_a53ss_diagram_default as default
 };
-//# sourceMappingURL=spliceevent.a53ss.diagram-3EGT2GQA.js.map
+//# sourceMappingURL=spliceevent.a53ss.diagram-JMAVS3KG.js.map

package/dist/{spliceevent.exonskip.diagram-DPQPG2HL.js → spliceevent.exonskip.diagram-W2LMSGYY.js}

@@ -1,13 +1,13 @@
 import {
   spliceevent_phrase_default
-} from "./chunk-K5DHHUJL.js";
+} from "./chunk-INANR3VP.js";
 import {
   font
-} from "./chunk-Y6OL4KUS.js";
+} from "./chunk-PAIFJRXC.js";
 import "./chunk-HJ6L54YS.js";
-import "./chunk-BUQ7S2O2.js";
+import "./chunk-OY63PKHC.js";
 import "./chunk-OGVY5ALW.js";
-import "./chunk-TMFHJD3G.js";
+import "./chunk-XKXTJHA7.js";
 import "./chunk-YJWWWCJ6.js";
 import {
   IN_frame,
@@ -269,4 +269,4 @@ function spliceevent_exonskip_diagram_default(arg) {
 export {
   spliceevent_exonskip_diagram_default as default
 };
-//# sourceMappingURL=spliceevent.exonskip.diagram-DPQPG2HL.js.map
+//# sourceMappingURL=spliceevent.exonskip.diagram-W2LMSGYY.js.map

package/dist/{spliceevent.noeventdiagram-Y5MP7F2C.js → spliceevent.noeventdiagram-LC5NKSNU.js}

@@ -1,10 +1,10 @@
 import {
   font
-} from "./chunk-Y6OL4KUS.js";
+} from "./chunk-PAIFJRXC.js";
 import "./chunk-HJ6L54YS.js";
-import "./chunk-BUQ7S2O2.js";
+import "./chunk-OY63PKHC.js";
 import "./chunk-OGVY5ALW.js";
-import "./chunk-TMFHJD3G.js";
+import "./chunk-XKXTJHA7.js";
 import "./chunk-YJWWWCJ6.js";
 import {
   exoncolor
@@ -452,4 +452,4 @@ export {
   differentgenes,
   samegene
 };
-//# sourceMappingURL=spliceevent.noeventdiagram-Y5MP7F2C.js.map
+//# sourceMappingURL=spliceevent.noeventdiagram-LC5NKSNU.js.map

package/dist/{ssGSEA-LRXFLZQ4.js → ssGSEA-QRKPKH5W.js}

@@ -1,10 +1,10 @@
 import {
   appInit
-} from "./chunk-Y6OL4KUS.js";
+} from "./chunk-PAIFJRXC.js";
 import "./chunk-HJ6L54YS.js";
-import "./chunk-BUQ7S2O2.js";
+import "./chunk-OY63PKHC.js";
 import "./chunk-OGVY5ALW.js";
-import "./chunk-TMFHJD3G.js";
+import "./chunk-XKXTJHA7.js";
 import {
   TermTypes
 } from "./chunk-YJWWWCJ6.js";
@@ -54,4 +54,4 @@ var SearchHandler = class {
 export {
   SearchHandler
 };
-//# sourceMappingURL=ssGSEA-LRXFLZQ4.js.map
+//# sourceMappingURL=ssGSEA-QRKPKH5W.js.map

package/dist/{summarizeCnvGeneexp-J3NOFHHT.js → summarizeCnvGeneexp-ZAPW7HVF.js}

@@ -1,18 +1,18 @@
 import {
   launchPlot
-} from "./chunk-VMVBUU63.js";
+} from "./chunk-PDD65V7Q.js";
 import {
   addGeneSearchbox,
   fillTermWrapper,
   make_one_checkbox,
   table2col
-} from "./chunk-Y6OL4KUS.js";
+} from "./chunk-PAIFJRXC.js";
 import "./chunk-HJ6L54YS.js";
-import "./chunk-BUQ7S2O2.js";
+import "./chunk-OY63PKHC.js";
 import {
   Menu
 } from "./chunk-OGVY5ALW.js";
-import "./chunk-TMFHJD3G.js";
+import "./chunk-XKXTJHA7.js";
 import "./chunk-YJWWWCJ6.js";
 import {
   dtcnv
@@ -152,4 +152,4 @@ async function makeChartBtnMenu(holder, chartsInstance) {
 export {
   makeChartBtnMenu
 };
-//# sourceMappingURL=summarizeCnvGeneexp-J3NOFHHT.js.map
+//# sourceMappingURL=summarizeCnvGeneexp-ZAPW7HVF.js.map

package/dist/{summarizeGeneexpSurvival-EGHTXLLP.js → summarizeGeneexpSurvival-MNPR7TDO.js}

@@ -1,9 +1,9 @@
 import {
   launchPlot
-} from "./chunk-VMVBUU63.js";
+} from "./chunk-PDD65V7Q.js";
 import {
   t0_t2_defaultQ
-} from "./chunk-UJ5E5OSU.js";
+} from "./chunk-DVT7CXVM.js";
 import "./chunk-2VK3A23Z.js";
 import "./chunk-V2OJLJSK.js";
 import {
@@ -11,13 +11,13 @@ import {
   fillTermWrapper,
   table2col,
   termsettingInit
-} from "./chunk-Y6OL4KUS.js";
+} from "./chunk-PAIFJRXC.js";
 import "./chunk-HJ6L54YS.js";
-import "./chunk-BUQ7S2O2.js";
+import "./chunk-OY63PKHC.js";
 import {
   Menu
 } from "./chunk-OGVY5ALW.js";
-import "./chunk-TMFHJD3G.js";
+import "./chunk-XKXTJHA7.js";
 import "./chunk-YJWWWCJ6.js";
 import "./chunk-6RC5V24O.js";
 import "./chunk-IQIXGTQV.js";
@@ -99,4 +99,4 @@ async function makeChartBtnMenu(holder, chartsInstance) {
 export {
   makeChartBtnMenu
 };
-//# sourceMappingURL=summarizeGeneexpSurvival-EGHTXLLP.js.map
+//# sourceMappingURL=summarizeGeneexpSurvival-MNPR7TDO.js.map

package/dist/{summarizeMutationCnv-AMTGYZ6V.js → summarizeMutationCnv-TYRHDVGB.js}

@@ -1,18 +1,18 @@
 import {
   launchPlot
-} from "./chunk-VMVBUU63.js";
+} from "./chunk-PDD65V7Q.js";
 import {
   addGeneSearchbox,
   fillTermWrapper,
   make_one_checkbox,
   table2col
-} from "./chunk-Y6OL4KUS.js";
+} from "./chunk-PAIFJRXC.js";
 import "./chunk-HJ6L54YS.js";
-import "./chunk-BUQ7S2O2.js";
+import "./chunk-OY63PKHC.js";
 import {
   Menu
 } from "./chunk-OGVY5ALW.js";
-import "./chunk-TMFHJD3G.js";
+import "./chunk-XKXTJHA7.js";
 import "./chunk-YJWWWCJ6.js";
 import {
   dtcnv,
@@ -153,4 +153,4 @@ async function makeChartBtnMenu(holder, chartsInstance) {
 export {
   makeChartBtnMenu
 };
-//# sourceMappingURL=summarizeMutationCnv-AMTGYZ6V.js.map
+//# sourceMappingURL=summarizeMutationCnv-TYRHDVGB.js.map

package/dist/{summarizeMutationDiagnosis-7ZS2FUPE.js → summarizeMutationDiagnosis-2ZXR5NZW.js}

@@ -1,12 +1,12 @@
 import {
   launchPlot,
   makeChartBtnMenu
-} from "./chunk-VMVBUU63.js";
-import "./chunk-Y6OL4KUS.js";
+} from "./chunk-PDD65V7Q.js";
+import "./chunk-PAIFJRXC.js";
 import "./chunk-HJ6L54YS.js";
-import "./chunk-BUQ7S2O2.js";
+import "./chunk-OY63PKHC.js";
 import "./chunk-OGVY5ALW.js";
-import "./chunk-TMFHJD3G.js";
+import "./chunk-XKXTJHA7.js";
 import "./chunk-YJWWWCJ6.js";
 import "./chunk-6RC5V24O.js";
 import "./chunk-IQIXGTQV.js";
@@ -32,4 +32,4 @@ export {
   launchPlot,
   makeChartBtnMenu
 };
-//# sourceMappingURL=summarizeMutationDiagnosis-7ZS2FUPE.js.map
+//# sourceMappingURL=summarizeMutationDiagnosis-2ZXR5NZW.js.map

package/dist/{summarizeMutationSurvival-Z5STBDYF.js → summarizeMutationSurvival-4GDE2MYD.js}

@@ -1,16 +1,16 @@
 import {
   launchPlot
-} from "./chunk-VMVBUU63.js";
+} from "./chunk-PDD65V7Q.js";
 import {
   SearchHandler,
   fillTermWrapper,
   table2col,
   termsettingInit
-} from "./chunk-Y6OL4KUS.js";
+} from "./chunk-PAIFJRXC.js";
 import "./chunk-HJ6L54YS.js";
-import "./chunk-BUQ7S2O2.js";
+import "./chunk-OY63PKHC.js";
 import "./chunk-OGVY5ALW.js";
-import "./chunk-TMFHJD3G.js";
+import "./chunk-XKXTJHA7.js";
 import "./chunk-YJWWWCJ6.js";
 import "./chunk-6RC5V24O.js";
 import "./chunk-IQIXGTQV.js";
@@ -91,4 +91,4 @@ async function makeChartBtnMenu(holder, chartsInstance) {
 export {
   makeChartBtnMenu
 };
-//# sourceMappingURL=summarizeMutationSurvival-Z5STBDYF.js.map
+//# sourceMappingURL=summarizeMutationSurvival-4GDE2MYD.js.map

package/dist/{summary-YLRI3A3E.js → summary-UIXMPNKY.js}

@@ -2,24 +2,24 @@ import {
   componentInit,
   getPlotConfig,
   summaryInit
-} from "./chunk-AZ5J32KP.js";
-import "./chunk-VCZZ6N2C.js";
-import "./chunk-25MV7QKV.js";
-import "./chunk-U3EF5DDC.js";
-import "./chunk-WHJTQR5P.js";
-import "./chunk-EJSNAJBJ.js";
-import "./chunk-HJGGXQZ5.js";
+} from "./chunk-3HZWZ6SE.js";
+import "./chunk-MKFTRLKG.js";
+import "./chunk-KQQTS2GT.js";
+import "./chunk-3UTJHBNF.js";
+import "./chunk-MRCJES3F.js";
+import "./chunk-GRNOZADJ.js";
+import "./chunk-NCANCAZ3.js";
 import "./chunk-C4C3MDZO.js";
 import "./chunk-72PLI3GC.js";
 import "./chunk-B4KBMZQP.js";
-import "./chunk-VCZQJQIS.js";
+import "./chunk-QWMTKXKY.js";
 import "./chunk-JUT2O3BR.js";
 import "./chunk-PRZWSBMA.js";
-import "./chunk-Y6OL4KUS.js";
+import "./chunk-PAIFJRXC.js";
 import "./chunk-HJ6L54YS.js";
-import "./chunk-BUQ7S2O2.js";
+import "./chunk-OY63PKHC.js";
 import "./chunk-OGVY5ALW.js";
-import "./chunk-TMFHJD3G.js";
+import "./chunk-XKXTJHA7.js";
 import "./chunk-YJWWWCJ6.js";
 import "./chunk-6RC5V24O.js";
 import "./chunk-IQIXGTQV.js";
@@ -46,4 +46,4 @@ export {
   getPlotConfig,
   summaryInit
 };
-//# sourceMappingURL=summary-YLRI3A3E.js.map
+//# sourceMappingURL=summary-UIXMPNKY.js.map

package/dist/{summary.integration.spec-5ONC3S54.js → summary.integration.spec-B2MHPBXE.js}

@@ -1,6 +1,6 @@
 import {
   getRunPp
-} from "./chunk-X2J3DJX2.js";
+} from "./chunk-LXIL56VX.js";
 import {
   detectOne,
   detectStyle
@@ -8,21 +8,21 @@ import {
 import {
   require_tape
 } from "./chunk-EFPC6YYT.js";
-import "./chunk-D7QK5NTL.js";
-import "./chunk-CUVPRGNE.js";
-import "./chunk-CLNRUJ2N.js";
-import "./chunk-E3IIUVLZ.js";
-import "./chunk-BBEESEQM.js";
-import "./chunk-23TOE33H.js";
+import "./chunk-VQD7UONE.js";
+import "./chunk-ZXVIK7DX.js";
+import "./chunk-5P2KMK3V.js";
+import "./chunk-LYAWTLFE.js";
+import "./chunk-FGCTM675.js";
+import "./chunk-CSZ4ILMN.js";
 import "./chunk-MKAF2BHB.js";
 import "./chunk-DONWY7TP.js";
-import "./chunk-NJKN6DAK.js";
+import "./chunk-2E3IOEPG.js";
 import "./chunk-PRZWSBMA.js";
-import "./chunk-Y6OL4KUS.js";
+import "./chunk-PAIFJRXC.js";
 import "./chunk-HJ6L54YS.js";
-import "./chunk-BUQ7S2O2.js";
+import "./chunk-OY63PKHC.js";
 import "./chunk-OGVY5ALW.js";
-import "./chunk-TMFHJD3G.js";
+import "./chunk-XKXTJHA7.js";
 import "./chunk-YJWWWCJ6.js";
 import "./chunk-6RC5V24O.js";
 import "./chunk-IQIXGTQV.js";
@@ -406,4 +406,4 @@ var tabLabels2Find = ["Barchart", "Violin", "Boxplot"];
     );
   }
 });
-//# sourceMappingURL=summary.integration.spec-5ONC3S54.js.map
+//# sourceMappingURL=summary.integration.spec-B2MHPBXE.js.map

package/dist/{summaryInput-3ZSTIE5B.js → summaryInput-IPM4QVTX.js}

@@ -1,6 +1,6 @@
 import {
   t0_t2_defaultQ
-} from "./chunk-UJ5E5OSU.js";
+} from "./chunk-DVT7CXVM.js";
 import "./chunk-2VK3A23Z.js";
 import "./chunk-V2OJLJSK.js";
 import {
@@ -9,11 +9,11 @@ import {
   defaultUiLabels,
   fillTermWrapper,
   term0_term2_defaultQ
-} from "./chunk-Y6OL4KUS.js";
+} from "./chunk-PAIFJRXC.js";
 import "./chunk-HJ6L54YS.js";
-import "./chunk-BUQ7S2O2.js";
+import "./chunk-OY63PKHC.js";
 import "./chunk-OGVY5ALW.js";
-import "./chunk-TMFHJD3G.js";
+import "./chunk-XKXTJHA7.js";
 import "./chunk-YJWWWCJ6.js";
 import "./chunk-6RC5V24O.js";
 import "./chunk-IQIXGTQV.js";
@@ -147,7 +147,7 @@ var SummaryInputPlot = class _SummaryInputPlot extends PlotBase {
   }
   renderSubmit() {
     this.dom.submitBtn = this.dom.submit.append("button").property("disabled", true).style("border", "none").style("border-radius", "20px").style("padding", "10px 15px").text("Submit").on("click", () => {
-      const { term, term2, term0, term2_surv, term0_surv } = structuredClone(this.config);
+      const { term, term2, term0, term2_surv, term0_surv, filter } = structuredClone(this.config);
       if (!term) throw "config.term is missing";
       const chartType = term.term.type == "survival" ? "survival" : "summary";
       this.app.dispatch({
@@ -159,7 +159,8 @@ var SummaryInputPlot = class _SummaryInputPlot extends PlotBase {
               chartType,
               term,
               term2: chartType == "survival" ? term2_surv : term2,
-              term0: chartType == "survival" ? term0_surv : term0
+              term0: chartType == "survival" ? term0_surv : term0,
+              filter
             }
           },
           {
@@ -209,4 +210,4 @@ export {
   getPlotConfig,
   summaryInputInit
 };
-//# sourceMappingURL=summaryInput-3ZSTIE5B.js.map
+//# sourceMappingURL=summaryInput-IPM4QVTX.js.map

package/dist/{summaryInput-3ZSTIE5B.js.map → summaryInput-IPM4QVTX.js.map}

@@ -1,7 +1,7 @@
 {
   "version": 3,
   "sources": ["../plots/summaryInput.ts"],
-  "sourcesContent": ["import { PlotBase, defaultUiLabels } from './PlotBase.ts'\nimport { getCompInit, copyMerge, type ComponentApi, type RxComponent } from '#rx'\nimport { controlsInit, term0_term2_defaultQ } from './controls'\nimport { t0_t2_defaultQ as term0_term2_defaultQ_surv } from './survival/survival.ts'\nimport { fillTermWrapper } from '#termsetting'\n\nclass SummaryInputPlot extends PlotBase implements RxComponent {\n\tstatic type = 'summaryInput'\n\n\t// expected RxComponent props, some are already declared/set in PlotBase\n\ttype: string\n\tparentId?: string\n\tdom!: {\n\t\t[index: string]: any\n\t}\n\tcomponents: {\n\t\t[name: string]: ComponentApi | { [name: string]: ComponentApi }\n\t} = {}\n\t// expected class-specific props\n\tconfigTermKeys = ['term', 'term0', 'term2']\n\tconfig: any\n\n\tconstructor(opts, api) {\n\t\tsuper(opts, api)\n\t\tthis.type = SummaryInputPlot.type\n\t\tthis.dom = {\n\t\t\theader: opts.header.html('Correlation Input'),\n\t\t\tholder: opts.holder,\n\t\t\tcontrols: opts.holder.append('div'),\n\t\t\tsubmit: opts.holder\n\t\t\t\t.append('div')\n\t\t\t\t.style('position', 'relative')\n\t\t\t\t.style('margin', '10px')\n\t\t\t\t.style('max-width', '200px')\n\t\t}\n\t}\n\n\tgetState(appState) {\n\t\tconst config = appState.plots.find(p => p.id === this.id)\n\t\tif (!config) {\n\t\t\tthrow `No plot with id='${this.id}' found. Did you set this.id before this.api = getComponentApi(this)?`\n\t\t}\n\t\treturn {\n\t\t\ttermfilter: appState.termfilter,\n\t\t\tconfig,\n\t\t\t// quick fix to skip history tracking as needed\n\t\t\t_scope_: appState._scope_\n\t\t}\n\t}\n\n\tasync init(appState) {\n\t\tconst state = this.getState(appState)\n\t\tthis.renderSubmit()\n\t\tawait this.setControls(state.config)\n\t}\n\n\tasync setControls(config) {\n\t\tconst controlLabels = config.controlLabels\n\t\tconst inputs = [\n\t\t\t{\n\t\t\t\ttype: 'term',\n\t\t\t\tconfigKey: 'term',\n\t\t\t\tusecase: { target: 'summaryInput', detail: 'term' },\n\t\t\t\tlabel: controlLabels.term1?.label || 'Primary variable',\n\t\t\t\tprocessConfig: config => {\n\t\t\t\t\tconst { term, term2, term0, term2_surv, term0_surv } = this.state.config\n\t\t\t\t\tconst editedType = config.term?.term?.type\n\t\t\t\t\tif (editedType === term?.term?.type) return\n\t\t\t\t\tif (editedType == 'survival') {\n\t\t\t\t\t\tif (term2 && term2.term?.name != term2_surv?.term?.name)\n\t\t\t\t\t\t\tconfig.term2 = { term: structuredClone(term2.term), q: {} }\n\t\t\t\t\t\tif (term0 && term0.term?.name != term0_surv?.term?.name)\n\t\t\t\t\t\t\tconfig.term0 = { term: structuredClone(term0.term), q: {} }\n\t\t\t\t\t} else {\n\t\t\t\t\t\tif (term2_surv && term2_surv.term?.name != term2?.term?.name)\n\t\t\t\t\t\t\tconfig.term2 = { term: structuredClone(term2_surv.term), q: {} }\n\t\t\t\t\t\tif (term0_surv && term0_surv.term.name != term0?.term?.name)\n\t\t\t\t\t\t\tconfig.term0 = { term: structuredClone(term0_surv.term), q: {} }\n\t\t\t\t\t}\n\t\t\t\t}\n\t\t\t},\n\t\t\t{\n\t\t\t\ttype: 'term',\n\t\t\t\tconfigKey: 'term2',\n\t\t\t\tusecase: { target: 'summaryInput', detail: 'term2' },\n\t\t\t\tlabel: controlLabels.term2.label,\n\t\t\t\tdefaultQ4fillTW: term0_term2_defaultQ,\n\t\t\t\tgetDisplayStyle: plot => (plot.config.term?.term.type == 'survival' ? 'none' : 'table-row')\n\t\t\t},\n\t\t\t{\n\t\t\t\ttype: 'term',\n\t\t\t\tconfigKey: 'term0',\n\t\t\t\tusecase: { target: 'summaryInput', detail: 'term0' },\n\t\t\t\tlabel: controlLabels.term0.label,\n\t\t\t\tdefaultQ4fillTW: term0_term2_defaultQ,\n\t\t\t\tgetDisplayStyle: plot => (plot.config.term?.term.type == 'survival' ? 'none' : 'table-row')\n\t\t\t},\n\t\t\t{\n\t\t\t\ttype: 'term',\n\t\t\t\tconfigKey: 'term2_surv',\n\t\t\t\tusecase: { target: 'summaryInput', detail: 'term2' },\n\t\t\t\tlabel: controlLabels.term2.label,\n\t\t\t\tdefaultQ4fillTW: term0_term2_defaultQ_surv,\n\t\t\t\tgetDisplayStyle: plot => (plot.config.term?.term.type == 'survival' ? 'table-row' : 'none')\n\t\t\t},\n\t\t\t{\n\t\t\t\ttype: 'term',\n\t\t\t\tconfigKey: 'term0_surv',\n\t\t\t\tusecase: { target: 'summaryInput', detail: 'term0' },\n\t\t\t\tlabel: controlLabels.term0.label,\n\t\t\t\tdefaultQ4fillTW: term0_term2_defaultQ_surv + '_surv',\n\t\t\t\tgetDisplayStyle: plot => (plot.config.term?.term.type == 'survival' ? 'table-row' : 'none')\n\t\t\t}\n\t\t]\n\n\t\tthis.components.controls = await controlsInit({\n\t\t\tapp: this.app,\n\t\t\tid: this.id,\n\t\t\tholder: this.dom.controls.style('display', 'inline-block'),\n\t\t\tisOpen: true,\n\t\t\tshowTopBar: false,\n\t\t\tinputs,\n\t\t\t// may comment out loadingMasks option to be able to click the submit button and\n\t\t\t// manually test submitting before a config tw is fully filled, there should only be\n\t\t\t// a console warning and no displayed error messages in the app\n\t\t\tloadingMasks: [this.dom.submitMask]\n\t\t})\n\n\t\t//const appState = this.app.getState()\n\t\t//this.components.update({ state: this.state, appState })\n\t}\n\n\trenderSubmit() {\n\t\tthis.dom.submitBtn = this.dom.submit\n\t\t\t.append('button')\n\t\t\t.property('disabled', true)\n\t\t\t.style('border', 'none')\n\t\t\t.style('border-radius', '20px')\n\t\t\t.style('padding', '10px 15px')\n\t\t\t.text('Submit')\n\t\t\t.on('click', () => {\n\t\t\t\tconst { term, term2, term0, term2_surv, term0_surv } = structuredClone(this.config)\n\n\t\t\t\tif (!term) throw 'config.term is missing'\n\t\t\t\t// if term1 is surival term, launch survival plot\n\t\t\t\t// otherwise, launch summary plot\n\t\t\t\tconst chartType = term.term.type == 'survival' ? 'survival' : 'summary'\n\t\t\t\tthis.app.dispatch({\n\t\t\t\t\ttype: 'app_refresh',\n\t\t\t\t\tsubactions: [\n\t\t\t\t\t\t{\n\t\t\t\t\t\t\ttype: 'plot_create',\n\t\t\t\t\t\t\tconfig: {\n\t\t\t\t\t\t\t\tchartType,\n\t\t\t\t\t\t\t\tterm,\n\t\t\t\t\t\t\t\tterm2: chartType == 'survival' ? term2_surv : term2,\n\t\t\t\t\t\t\t\tterm0: chartType == 'survival' ? term0_surv : term0\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t},\n\t\t\t\t\t\t{\n\t\t\t\t\t\t\ttype: 'plot_delete',\n\t\t\t\t\t\t\tid: this.id\n\t\t\t\t\t\t}\n\t\t\t\t\t]\n\t\t\t\t})\n\t\t\t})\n\n\t\tthis.dom.submitMask = this.dom.submit\n\t\t\t.append('div')\n\t\t\t.style('position', 'absolute')\n\t\t\t.style('top', 0)\n\t\t\t.style('left', 0)\n\t\t\t.style('height', '100%')\n\t\t\t.style('width', '100%')\n\t\t\t.style('background-color', `rgba(255,255,255,0.7)`)\n\t\t\t.style('display', 'none')\n\t}\n\n\tasync main() {\n\t\tthis.config = await this.getMutableConfig()\n\t\tthis.dom.submitBtn.property('disabled', !this.config.term).style('cursor', this.config.term ? 'pointer' : 'default')\n\t\tthis.dom.submitMask.style('display', 'none')\n\t}\n}\n\nexport const summaryInputInit = getCompInit(SummaryInputPlot)\nexport const componentInit = summaryInputInit\n\nexport async function getPlotConfig(opts, app) {\n\ttry {\n\t\t// don't supply defaultQ if term.bins or term.q is defined (e.g. if q.mode='continuous', shouldn't override it with defaultQ)\n\t\tif (opts.term) {\n\t\t\tconst defaultQ: any = opts.term.bins || opts.term.q ? undefined : { geneVariant: { type: 'predefined-groupset' } }\n\t\t\tawait fillTermWrapper(opts.term, app.vocabApi, defaultQ)\n\t\t}\n\t\tif (opts.term2) {\n\t\t\tconst defaultQ =\n\t\t\t\topts.term2.bins || opts.term2.q\n\t\t\t\t\t? undefined\n\t\t\t\t\t: opts.term.term.type == 'survival'\n\t\t\t\t\t? term0_term2_defaultQ_surv\n\t\t\t\t\t: term0_term2_defaultQ\n\t\t\tawait fillTermWrapper(opts.term2, app.vocabApi, defaultQ)\n\t\t}\n\t\tif (opts.term0) {\n\t\t\tconst defaultQ =\n\t\t\t\topts.term0.bins || opts.term0.q\n\t\t\t\t\t? undefined\n\t\t\t\t\t: opts.term.term.type == 'survival'\n\t\t\t\t\t? term0_term2_defaultQ_surv\n\t\t\t\t\t: term0_term2_defaultQ\n\t\t\tawait fillTermWrapper(opts.term0, app.vocabApi, defaultQ)\n\t\t}\n\t} catch (e: any) {\n\t\tif (e.stack) console.log(e.stack)\n\t\tthrow `${e} [summaryInput getPlotConfig()]`\n\t}\n\n\tconst config = {\n\t\tchartType: 'summaryInput',\n\t\tsettings: {},\n\t\tcontrolLabels: Object.assign({}, defaultUiLabels, app.vocabApi.termdbConfig.uiLabels || {})\n\t}\n\n\t// may apply term-specific changes to the default object\n\treturn copyMerge(config, opts)\n}\n"],
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+  "sourcesContent": ["import { PlotBase, defaultUiLabels } from './PlotBase.ts'\nimport { getCompInit, copyMerge, type ComponentApi, type RxComponent } from '#rx'\nimport { controlsInit, term0_term2_defaultQ } from './controls'\nimport { t0_t2_defaultQ as term0_term2_defaultQ_surv } from './survival/survival.ts'\nimport { fillTermWrapper } from '#termsetting'\n\nclass SummaryInputPlot extends PlotBase implements RxComponent {\n\tstatic type = 'summaryInput'\n\n\t// expected RxComponent props, some are already declared/set in PlotBase\n\ttype: string\n\tparentId?: string\n\tdom!: {\n\t\t[index: string]: any\n\t}\n\tcomponents: {\n\t\t[name: string]: ComponentApi | { [name: string]: ComponentApi }\n\t} = {}\n\t// expected class-specific props\n\tconfigTermKeys = ['term', 'term0', 'term2']\n\tconfig: any\n\n\tconstructor(opts, api) {\n\t\tsuper(opts, api)\n\t\tthis.type = SummaryInputPlot.type\n\t\tthis.dom = {\n\t\t\theader: opts.header.html('Correlation Input'),\n\t\t\tholder: opts.holder,\n\t\t\tcontrols: opts.holder.append('div'),\n\t\t\tsubmit: opts.holder\n\t\t\t\t.append('div')\n\t\t\t\t.style('position', 'relative')\n\t\t\t\t.style('margin', '10px')\n\t\t\t\t.style('max-width', '200px')\n\t\t}\n\t}\n\n\tgetState(appState) {\n\t\tconst config = appState.plots.find(p => p.id === this.id)\n\t\tif (!config) {\n\t\t\tthrow `No plot with id='${this.id}' found. Did you set this.id before this.api = getComponentApi(this)?`\n\t\t}\n\t\treturn {\n\t\t\ttermfilter: appState.termfilter,\n\t\t\tconfig,\n\t\t\t// quick fix to skip history tracking as needed\n\t\t\t_scope_: appState._scope_\n\t\t}\n\t}\n\n\tasync init(appState) {\n\t\tconst state = this.getState(appState)\n\t\tthis.renderSubmit()\n\t\tawait this.setControls(state.config)\n\t}\n\n\tasync setControls(config) {\n\t\tconst controlLabels = config.controlLabels\n\t\tconst inputs = [\n\t\t\t{\n\t\t\t\ttype: 'term',\n\t\t\t\tconfigKey: 'term',\n\t\t\t\tusecase: { target: 'summaryInput', detail: 'term' },\n\t\t\t\tlabel: controlLabels.term1?.label || 'Primary variable',\n\t\t\t\tprocessConfig: config => {\n\t\t\t\t\tconst { term, term2, term0, term2_surv, term0_surv } = this.state.config\n\t\t\t\t\tconst editedType = config.term?.term?.type\n\t\t\t\t\tif (editedType === term?.term?.type) return\n\t\t\t\t\tif (editedType == 'survival') {\n\t\t\t\t\t\tif (term2 && term2.term?.name != term2_surv?.term?.name)\n\t\t\t\t\t\t\tconfig.term2 = { term: structuredClone(term2.term), q: {} }\n\t\t\t\t\t\tif (term0 && term0.term?.name != term0_surv?.term?.name)\n\t\t\t\t\t\t\tconfig.term0 = { term: structuredClone(term0.term), q: {} }\n\t\t\t\t\t} else {\n\t\t\t\t\t\tif (term2_surv && term2_surv.term?.name != term2?.term?.name)\n\t\t\t\t\t\t\tconfig.term2 = { term: structuredClone(term2_surv.term), q: {} }\n\t\t\t\t\t\tif (term0_surv && term0_surv.term.name != term0?.term?.name)\n\t\t\t\t\t\t\tconfig.term0 = { term: structuredClone(term0_surv.term), q: {} }\n\t\t\t\t\t}\n\t\t\t\t}\n\t\t\t},\n\t\t\t{\n\t\t\t\ttype: 'term',\n\t\t\t\tconfigKey: 'term2',\n\t\t\t\tusecase: { target: 'summaryInput', detail: 'term2' },\n\t\t\t\tlabel: controlLabels.term2.label,\n\t\t\t\tdefaultQ4fillTW: term0_term2_defaultQ,\n\t\t\t\tgetDisplayStyle: plot => (plot.config.term?.term.type == 'survival' ? 'none' : 'table-row')\n\t\t\t},\n\t\t\t{\n\t\t\t\ttype: 'term',\n\t\t\t\tconfigKey: 'term0',\n\t\t\t\tusecase: { target: 'summaryInput', detail: 'term0' },\n\t\t\t\tlabel: controlLabels.term0.label,\n\t\t\t\tdefaultQ4fillTW: term0_term2_defaultQ,\n\t\t\t\tgetDisplayStyle: plot => (plot.config.term?.term.type == 'survival' ? 'none' : 'table-row')\n\t\t\t},\n\t\t\t{\n\t\t\t\ttype: 'term',\n\t\t\t\tconfigKey: 'term2_surv',\n\t\t\t\tusecase: { target: 'summaryInput', detail: 'term2' },\n\t\t\t\tlabel: controlLabels.term2.label,\n\t\t\t\tdefaultQ4fillTW: term0_term2_defaultQ_surv,\n\t\t\t\tgetDisplayStyle: plot => (plot.config.term?.term.type == 'survival' ? 'table-row' : 'none')\n\t\t\t},\n\t\t\t{\n\t\t\t\ttype: 'term',\n\t\t\t\tconfigKey: 'term0_surv',\n\t\t\t\tusecase: { target: 'summaryInput', detail: 'term0' },\n\t\t\t\tlabel: controlLabels.term0.label,\n\t\t\t\tdefaultQ4fillTW: term0_term2_defaultQ_surv + '_surv',\n\t\t\t\tgetDisplayStyle: plot => (plot.config.term?.term.type == 'survival' ? 'table-row' : 'none')\n\t\t\t}\n\t\t]\n\n\t\tthis.components.controls = await controlsInit({\n\t\t\tapp: this.app,\n\t\t\tid: this.id,\n\t\t\tholder: this.dom.controls.style('display', 'inline-block'),\n\t\t\tisOpen: true,\n\t\t\tshowTopBar: false,\n\t\t\tinputs,\n\t\t\t// may comment out loadingMasks option to be able to click the submit button and\n\t\t\t// manually test submitting before a config tw is fully filled, there should only be\n\t\t\t// a console warning and no displayed error messages in the app\n\t\t\tloadingMasks: [this.dom.submitMask]\n\t\t})\n\n\t\t//const appState = this.app.getState()\n\t\t//this.components.update({ state: this.state, appState })\n\t}\n\n\trenderSubmit() {\n\t\tthis.dom.submitBtn = this.dom.submit\n\t\t\t.append('button')\n\t\t\t.property('disabled', true)\n\t\t\t.style('border', 'none')\n\t\t\t.style('border-radius', '20px')\n\t\t\t.style('padding', '10px 15px')\n\t\t\t.text('Submit')\n\t\t\t.on('click', () => {\n\t\t\t\tconst { term, term2, term0, term2_surv, term0_surv, filter } = structuredClone(this.config)\n\n\t\t\t\tif (!term) throw 'config.term is missing'\n\t\t\t\t// if term1 is surival term, launch survival plot\n\t\t\t\t// otherwise, launch summary plot\n\t\t\t\tconst chartType = term.term.type == 'survival' ? 'survival' : 'summary'\n\t\t\t\tthis.app.dispatch({\n\t\t\t\t\ttype: 'app_refresh',\n\t\t\t\t\tsubactions: [\n\t\t\t\t\t\t{\n\t\t\t\t\t\t\ttype: 'plot_create',\n\t\t\t\t\t\t\tconfig: {\n\t\t\t\t\t\t\t\tchartType,\n\t\t\t\t\t\t\t\tterm,\n\t\t\t\t\t\t\t\tterm2: chartType == 'survival' ? term2_surv : term2,\n\t\t\t\t\t\t\t\tterm0: chartType == 'survival' ? term0_surv : term0,\n\t\t\t\t\t\t\t\tfilter\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t},\n\t\t\t\t\t\t{\n\t\t\t\t\t\t\ttype: 'plot_delete',\n\t\t\t\t\t\t\tid: this.id\n\t\t\t\t\t\t}\n\t\t\t\t\t]\n\t\t\t\t})\n\t\t\t})\n\n\t\tthis.dom.submitMask = this.dom.submit\n\t\t\t.append('div')\n\t\t\t.style('position', 'absolute')\n\t\t\t.style('top', 0)\n\t\t\t.style('left', 0)\n\t\t\t.style('height', '100%')\n\t\t\t.style('width', '100%')\n\t\t\t.style('background-color', `rgba(255,255,255,0.7)`)\n\t\t\t.style('display', 'none')\n\t}\n\n\tasync main() {\n\t\tthis.config = await this.getMutableConfig()\n\t\tthis.dom.submitBtn.property('disabled', !this.config.term).style('cursor', this.config.term ? 'pointer' : 'default')\n\t\tthis.dom.submitMask.style('display', 'none')\n\t}\n}\n\nexport const summaryInputInit = getCompInit(SummaryInputPlot)\nexport const componentInit = summaryInputInit\n\nexport async function getPlotConfig(opts, app) {\n\ttry {\n\t\t// don't supply defaultQ if term.bins or term.q is defined (e.g. if q.mode='continuous', shouldn't override it with defaultQ)\n\t\tif (opts.term) {\n\t\t\tconst defaultQ: any = opts.term.bins || opts.term.q ? undefined : { geneVariant: { type: 'predefined-groupset' } }\n\t\t\tawait fillTermWrapper(opts.term, app.vocabApi, defaultQ)\n\t\t}\n\t\tif (opts.term2) {\n\t\t\tconst defaultQ =\n\t\t\t\topts.term2.bins || opts.term2.q\n\t\t\t\t\t? undefined\n\t\t\t\t\t: opts.term.term.type == 'survival'\n\t\t\t\t\t? term0_term2_defaultQ_surv\n\t\t\t\t\t: term0_term2_defaultQ\n\t\t\tawait fillTermWrapper(opts.term2, app.vocabApi, defaultQ)\n\t\t}\n\t\tif (opts.term0) {\n\t\t\tconst defaultQ =\n\t\t\t\topts.term0.bins || opts.term0.q\n\t\t\t\t\t? undefined\n\t\t\t\t\t: opts.term.term.type == 'survival'\n\t\t\t\t\t? term0_term2_defaultQ_surv\n\t\t\t\t\t: term0_term2_defaultQ\n\t\t\tawait fillTermWrapper(opts.term0, app.vocabApi, defaultQ)\n\t\t}\n\t} catch (e: any) {\n\t\tif (e.stack) console.log(e.stack)\n\t\tthrow `${e} [summaryInput getPlotConfig()]`\n\t}\n\n\tconst config = {\n\t\tchartType: 'summaryInput',\n\t\tsettings: {},\n\t\tcontrolLabels: Object.assign({}, defaultUiLabels, app.vocabApi.termdbConfig.uiLabels || {})\n\t}\n\n\t// may apply term-specific changes to the default object\n\treturn copyMerge(config, opts)\n}\n"],
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package/dist/{sunburst-DRZZYAUH.js → sunburst-Z5XCA3RM.js}

@@ -1,10 +1,10 @@
 import {
   textlensf
-} from "./chunk-Y6OL4KUS.js";
+} from "./chunk-PAIFJRXC.js";
 import "./chunk-HJ6L54YS.js";
-import "./chunk-BUQ7S2O2.js";
+import "./chunk-OY63PKHC.js";
 import "./chunk-OGVY5ALW.js";
-import "./chunk-TMFHJD3G.js";
+import "./chunk-XKXTJHA7.js";
 import "./chunk-YJWWWCJ6.js";
 import "./chunk-6RC5V24O.js";
 import "./chunk-IQIXGTQV.js";
@@ -276,4 +276,4 @@ function slicemouseover(d, sun) {
 export {
   sunburst_default as default
 };
-//# sourceMappingURL=sunburst-DRZZYAUH.js.map
+//# sourceMappingURL=sunburst-Z5XCA3RM.js.map

package/dist/{survival-PJKJ2Z4B.js → survival-2BUVKUP6.js}

@@ -1,10 +1,10 @@
 import {
   getPillNameDefault
-} from "./chunk-Y6OL4KUS.js";
+} from "./chunk-PAIFJRXC.js";
 import "./chunk-HJ6L54YS.js";
-import "./chunk-BUQ7S2O2.js";
+import "./chunk-OY63PKHC.js";
 import "./chunk-OGVY5ALW.js";
-import "./chunk-TMFHJD3G.js";
+import "./chunk-XKXTJHA7.js";
 import "./chunk-YJWWWCJ6.js";
 import "./chunk-6RC5V24O.js";
 import "./chunk-IQIXGTQV.js";
@@ -50,4 +50,4 @@ export {
   fillTW,
   getHandler
 };
-//# sourceMappingURL=survival-PJKJ2Z4B.js.map
+//# sourceMappingURL=survival-2BUVKUP6.js.map

package/dist/{survival-5E2VV46S.js → survival-PP6LHIQS.js}

@@ -3,14 +3,14 @@ import {
   getPlotConfig,
   survivalInit,
   t0_t2_defaultQ
-} from "./chunk-UJ5E5OSU.js";
+} from "./chunk-DVT7CXVM.js";
 import "./chunk-2VK3A23Z.js";
 import "./chunk-V2OJLJSK.js";
-import "./chunk-Y6OL4KUS.js";
+import "./chunk-PAIFJRXC.js";
 import "./chunk-HJ6L54YS.js";
-import "./chunk-BUQ7S2O2.js";
+import "./chunk-OY63PKHC.js";
 import "./chunk-OGVY5ALW.js";
-import "./chunk-TMFHJD3G.js";
+import "./chunk-XKXTJHA7.js";
 import "./chunk-YJWWWCJ6.js";
 import "./chunk-6RC5V24O.js";
 import "./chunk-IQIXGTQV.js";
@@ -38,4 +38,4 @@ export {
   survivalInit,
   t0_t2_defaultQ
 };
-//# sourceMappingURL=survival-5E2VV46S.js.map
+//# sourceMappingURL=survival-PP6LHIQS.js.map

package/dist/{survival.integration.spec-ZHEVVSFI.js → survival.integration.spec-NZYYNIKZ.js}

@@ -1,6 +1,6 @@
 import {
   getRunPp
-} from "./chunk-X2J3DJX2.js";
+} from "./chunk-LXIL56VX.js";
 import {
   detectGte
 } from "./chunk-XENPVHIO.js";
@@ -8,21 +8,21 @@ import "./chunk-AHBQHHH5.js";
 import {
   require_tape
 } from "./chunk-EFPC6YYT.js";
-import "./chunk-D7QK5NTL.js";
-import "./chunk-CUVPRGNE.js";
-import "./chunk-CLNRUJ2N.js";
-import "./chunk-E3IIUVLZ.js";
-import "./chunk-BBEESEQM.js";
-import "./chunk-23TOE33H.js";
+import "./chunk-VQD7UONE.js";
+import "./chunk-ZXVIK7DX.js";
+import "./chunk-5P2KMK3V.js";
+import "./chunk-LYAWTLFE.js";
+import "./chunk-FGCTM675.js";
+import "./chunk-CSZ4ILMN.js";
 import "./chunk-MKAF2BHB.js";
 import "./chunk-DONWY7TP.js";
-import "./chunk-NJKN6DAK.js";
+import "./chunk-2E3IOEPG.js";
 import "./chunk-PRZWSBMA.js";
-import "./chunk-Y6OL4KUS.js";
+import "./chunk-PAIFJRXC.js";
 import "./chunk-HJ6L54YS.js";
-import "./chunk-BUQ7S2O2.js";
+import "./chunk-OY63PKHC.js";
 import "./chunk-OGVY5ALW.js";
-import "./chunk-TMFHJD3G.js";
+import "./chunk-XKXTJHA7.js";
 import "./chunk-YJWWWCJ6.js";
 import "./chunk-6RC5V24O.js";
 import "./chunk-IQIXGTQV.js";
@@ -781,4 +781,4 @@ var runpp = getRunPp("mass", {
     test.end();
   }
 });
-//# sourceMappingURL=survival.integration.spec-ZHEVVSFI.js.map
+//# sourceMappingURL=survival.integration.spec-NZYYNIKZ.js.map