@sjcrh/proteinpaint-client 2.146.4-1 → 2.147.1

package/dist/chunk-24OPGQ4S.js.map

@@ -0,0 +1,7 @@
+{
+  "version": 3,
+  "sources": ["../plots/profilePlot.js"],
+  "sourcesContent": ["import { controlsInit } from './controls.js'\nimport { fillTermWrapper, fillTwLst } from '#termsetting'\nimport { select } from 'd3-selection'\nimport { Menu } from '#dom/menu'\nimport { icons as icon_functions } from '#dom/control.icons'\nimport { getCategoricalTermFilter, getCombinedTermFilter } from '#filter'\nimport { DownloadMenu } from '#dom/downloadMenu'\nimport { importPlot } from '#plots/importPlot.js'\n/*\n\nThe profilePlot is the base class for all the profile plots. It handles the common functionality such as setting controls, fetching data, and initializing the plot elements.\nAll the profile plots have the same filters:\n- Region\n- Country\n- Income group\n- Facility type\n- Teaching status\n- Referral status\n- Funding source\n- Hospital volume\n- Year of implementation\n- Sites\n\nThe profileRadarFacility adds at the top of these filters the facility select as here we compare a single facility with the average scores of all the facilities aggregated\n*/\n\nconst orderedIncomes = ['Low income', 'Lower middle income', 'Upper middle income', 'High income']\nconst orderedVolumes = [\n\t'Small (1-25 annual newly diagnoses)',\n\t'Medium (26-80 annual newly diagnoses)',\n\t'Large (81-120 annual newly diagnoses)',\n\t'Very large (>120 annual newly diagnoses)'\n]\n\nexport const ABBREV_COHORT = 0\nexport const FULL_COHORT = 1\nexport class profilePlot {\n\tconstructor() {\n\t\tthis.type = 'profilePlot'\n\t\tthis.downloadCount = 0\n\t\tthis.tip = new Menu({ padding: '4px', offsetX: 10, offsetY: 15 })\n\t\tthis.scoreTerms = []\n\t\tthis.isRadarFacility = false\n\t\tthis.components = { plots: {} }\n\t}\n\n\tgetState(appState) {\n\t\tconst config = appState.plots.find(p => p.id === this.id)\n\t\tif (!config) throw `No plot with id='${this.id}' found`\n\t\tconst { logged, sites, user } = getProfileLogin(this.app, appState.activeCohort) //later on replace with real login info\n\t\tconst site = sites?.[0]\n\t\treturn {\n\t\t\tconfig,\n\t\t\ttermfilter: appState.termfilter,\n\t\t\tdslabel: appState.vocab.dslabel,\n\t\t\ttermdbConfig: appState.termdbConfig,\n\t\t\tvocab: appState.vocab,\n\t\t\tlogged, //later change to read login info\n\t\t\tsite,\n\t\t\tsites,\n\t\t\tuser,\n\t\t\tactiveCohort: appState.activeCohort,\n\t\t\tplots: appState.plots.filter(p => p.parentId === this.id) //this property is needed to indicate that child plots need to be added to the appState plots\n\t\t}\n\t}\n\n\t//refers to the view where all the filters are shown and not the preselected site\n\tisAggregate() {\n\t\tif (!this.state.logged) return true\n\t\tif (this.settings.isAggregate) return true //marked by the user\n\t\tif (this.state.sites?.length > 1 || this.state.user == 'admin' || this.isRadarFacility) return true //multiple sites selected\n\t}\n\n\tasync init(appState) {\n\t\tconst config = appState.plots.find(p => p.id === this.id)\n\t\tconst state = this.getState(appState)\n\t\tif (this.opts.header) {\n\t\t\tthis.chartName = config.chartType.match(/[A-Z][a-z]+/g)\n\t\t\tthis.chartName = this.chartName.join(' ')\n\t\t\tthis.chartName = config.headerTitle\n\t\t\t\t? config.headerTitle + ` / ${state.user}`\n\t\t\t\t: this.chartName + ` / ${state.user}`\n\t\t\tthis.opts.header.style('text-transform', 'capitalize').text(this.chartName)\n\t\t}\n\t\tconst div = this.opts.holder.append('div').style('display', 'inline-block')\n\t\tconst leftDiv = div.append('div').style('display', 'inline-block').style('vertical-align', 'top')\n\n\t\tconst rightDiv = div.append('div').style('display', 'inline-block').style('vertical-align', 'top')\n\n\t\tconst controlsDiv = leftDiv.append('div').style('display', 'inline-block').style('font-size', '0.9em')\n\t\tconst iconsDiv = leftDiv.append('div').style('margin-left', '6px').style('margin-top', '15px')\n\n\t\tconst holder = rightDiv.insert('div').style('display', 'inline-block')\n\n\t\tconst plotDiv = holder.append('div')\n\t\tthis.dom = {\n\t\t\tcontrolsDiv,\n\t\t\tholder,\n\t\t\ticonsDiv,\n\t\t\trightDiv,\n\t\t\tplotDiv\n\t\t}\n\t\tselect('.sjpp-output-sandbox-content').on('scroll', event => {\n\t\t\tif (this.onMouseOut) this.onMouseOut(event)\n\t\t})\n\t\tthis.dom.rightDiv.on('mousemove', event => this.onMouseOver(event))\n\t\tthis.dom.rightDiv.on('mouseleave', event => this.onMouseOut(event))\n\t\tthis.dom.rightDiv.on('mouseout', event => this.onMouseOut(event))\n\n\t\tdocument.addEventListener('scroll', () => this?.tip?.hide())\n\n\t\t//later on show table for the profileForms\n\t\tif (this.type != 'profileBarchart' && this.type != 'profileForms') {\n\t\t\tconst tableIconDiv = iconsDiv.append('div').style('padding-bottom', '15px')\n\t\t\tthis.dom.tableBt = tableIconDiv\n\t\t\t\t.append('button')\n\t\t\t\t.attr('data-testid', 'sjpp-profile-table-button')\n\t\t\t\t.style('border', 'none')\n\t\t\t\t.style('background-color', 'rgb(207, 226, 243)')\n\t\t\ticon_functions['table'](this.dom.tableBt, { title: 'Show table with data' })\n\t\t\tthis.dom.tableBt.on('click', () => {\n\t\t\t\tconst show = !this.settings.showTable\n\t\t\t\tthis.dom.tableBt.style('background-color', show ? 'rgb(207, 226, 243)' : 'transparent')\n\t\t\t\tthis.showTable(show)\n\t\t\t})\n\t\t}\n\t\ticon_functions['restart'](iconsDiv.append('div').style('padding', '0px 5px 15px 5px'), {\n\t\t\ttitle: 'Clear filters',\n\t\t\thandler: async () => {\n\t\t\t\tthis.clearFiltersExcept([])\n\t\t\t\tthis.app.dispatch({\n\t\t\t\t\ttype: 'plot_edit',\n\t\t\t\t\tid: this.id,\n\t\t\t\t\tconfig: { filter: this.getFilter(), settings: { [this.type]: this.settings } }\n\t\t\t\t})\n\t\t\t}\n\t\t})\n\t\tif (!config.parentId)\n\t\t\ticon_functions['add'](iconsDiv.append('div').style('padding', '3px'), {\n\t\t\t\ttitle: 'Open a new plot',\n\t\t\t\thandler: async () => {\n\t\t\t\t\tif (this.isComparison) return\n\t\t\t\t\tthis.legendG.selectAll('*').remove()\n\t\t\t\t\tlet config = structuredClone(this.config)\n\t\t\t\t\tconfig.parentId = this.id\n\t\t\t\t\tthis.app.dispatch({\n\t\t\t\t\t\ttype: 'plot_create',\n\t\t\t\t\t\tconfig\n\t\t\t\t\t})\n\t\t\t\t}\n\t\t\t})\n\t}\n\n\tonMouseOut(event) {\n\t\tthis.tip.hide()\n\t}\n\n\tasync showTable(show) {\n\t\tthis.settings.showTable = show\n\t\tawait this.app.dispatch({ type: 'plot_edit', id: this.id, config: { settings: { [this.type]: this.settings } } })\n\t}\n\n\tpreApiFreeze(api) {\n\t\tapi.getChartImages = () => this.getChartImages()\n\t}\n\n\tasync main() {\n\t\tthis.config = JSON.parse(JSON.stringify(this.state.config))\n\t\tthis.settings = this.config.settings[this.type]\n\t\tthis.isComparison = this.config.parentId || this.state.plots.length > 0\n\t\tif (this.dom.tableBt)\n\t\t\tthis.dom.tableBt.style('background-color', this.settings.showTable ? 'rgb(207, 226, 243)' : 'transparent')\n\t\tfor (const config of this.state.plots) {\n\t\t\tconst plot = structuredClone(config)\n\t\t\tif (this.components.plots[plot.id]) continue\n\t\t\tconst holder = this.opts.holder.append('div').style('display', 'inline-block').style('padding', '5px')\n\t\t\tplot.holder = holder.append('div')\n\t\t\tplot.app = this.app\n\t\t\tconst { componentInit } = await importPlot(plot.chartType)\n\t\t\tthis.components.plots[plot.id] = await componentInit(plot)\n\t\t}\n\t}\n\n\tasync setControls(additionalInputs = []) {\n\t\ttry {\n\t\t\tconst isRadarFacility = this.isRadarFacility\n\t\t\tconst filters = {}\n\t\t\tfor (const tw of this.config.filterTWs) {\n\t\t\t\tfilters[tw.term.id] = getCategoricalTermFilter(this.config.filterTWs, this.settings, tw)\n\t\t\t}\n\t\t\tthis.filteredTermValues = await this.app.vocabApi.filterTermValues({\n\t\t\t\tterms: this.config.filterTWs,\n\t\t\t\tfilter: this.state.termfilter.filter,\n\t\t\t\tfilters,\n\t\t\t\t// safe to pass because the backend code will still compare terms[] with the the dataset's hiddenTermIds,\n\t\t\t\t// it only affects what will be included in the aggregation and does not disable user access authentication\n\t\t\t\tfilterByUserSites: this.settings.filterByUserSites,\n\t\t\t\tshowAll: true\n\t\t\t})\n\t\t\tthis.regions = this.filteredTermValues[this.config.regionTW.id]\n\t\t\tthis.countries = this.filteredTermValues[this.config.countryTW.id]\n\t\t\tthis.incomes = this.filteredTermValues[this.config.incomeTW.id]\n\t\t\tthis.teachingStates = this.filteredTermValues[this.config.teachingStatusTW.id]\n\t\t\tthis.referralStates = this.filteredTermValues[this.config.referralStatusTW.id]\n\t\t\tthis.fundingSources = this.filteredTermValues[this.config.fundingSourceTW.id]\n\t\t\tthis.hospitalVolumes = this.filteredTermValues[this.config.hospitalVolumeTW.id]\n\t\t\tthis.yearsOfImplementation = this.filteredTermValues[this.config.yearOfImplementationTW.id]\n\t\t\tthis.incomes.sort((elem1, elem2) => {\n\t\t\t\tconst i1 = orderedIncomes.indexOf(elem1.value)\n\t\t\t\tconst i2 = orderedIncomes.indexOf(elem2.value)\n\t\t\t\tif (i1 < i2) return -1\n\t\t\t\treturn 1\n\t\t\t})\n\t\t\tthis.hospitalVolumes.sort((elem1, elem2) => {\n\t\t\t\tconst i1 = orderedVolumes.indexOf(elem1.value)\n\t\t\t\tconst i2 = orderedVolumes.indexOf(elem2.value)\n\t\t\t\tif (i1 < i2) return -1\n\t\t\t\treturn 1\n\t\t\t})\n\t\t\tthis.types = this.filteredTermValues[this.config.typeTW.id]\n\t\t\tconst isAggregate = this.isAggregate()\n\n\t\t\tif (!this.settings[this.config.facilityTW?.term?.id] && this.state.sites?.length == 1 && !isAggregate) {\n\t\t\t\tthis.settings[this.config.facilityTW?.term?.id] = [this.state.sites[0]]\n\t\t\t}\n\n\t\t\tthis.filter = this.config.filter || this.getFilter()\n\n\t\t\tif (this.type != 'profileForms')\n\t\t\t\tthis.data = await this.app.vocabApi.getProfileScores({\n\t\t\t\t\tscoreTerms: this.scoreTerms,\n\t\t\t\t\tfilter: this.filter,\n\t\t\t\t\tfacilityTW: this.config.facilityTW,\n\t\t\t\t\tfilterByUserSites: this.settings.filterByUserSites\n\t\t\t\t})\n\t\t\telse\n\t\t\t\tthis.data = await this.app.vocabApi.getProfileFormScores({\n\t\t\t\t\tscoreTerms: this.scoreTerms,\n\t\t\t\t\tscScoreTerms: this.scScoreTerms,\n\t\t\t\t\tfilter: this.filter,\n\t\t\t\t\tfacilityTW: this.config.facilityTW,\n\t\t\t\t\tfilterByUserSites: this.settings.filterByUserSites\n\t\t\t\t})\n\t\t\tif ('error' in this.data) throw this.data.error\n\t\t\tthis.sites = this.filteredTermValues[this.config.facilityTW.id]?.filter(s => !s.disabled && s.value)\n\n\t\t\tif (this.settings[this.config.facilityTW?.term?.id])\n\t\t\t\tfor (const site of this.settings[this.config.facilityTW?.term?.id]) {\n\t\t\t\t\tconst siteOption = this.sites.find(s => s.value == site)\n\t\t\t\t\tif (siteOption) siteOption.selected = true //mark selected sites\n\t\t\t\t}\n\t\t\tconst chartType = this.type\n\t\t\tthis.dom.controlsDiv.selectAll('*').remove()\n\t\t\tlet inputs = []\n\t\t\tconst userSitesFilterInput = {\n\t\t\t\tlabel: 'Use accessible sites only',\n\t\t\t\tboxLabel: '',\n\t\t\t\ttype: 'checkbox',\n\t\t\t\tchartType,\n\t\t\t\tsettingsKey: 'filterByUserSites'\n\t\t\t}\n\t\t\tif (this.state.sites?.length == 1 && !isRadarFacility) {\n\t\t\t\tconst dataInput = {\n\t\t\t\t\tlabel: 'Data',\n\t\t\t\t\ttype: 'radio',\n\t\t\t\t\tchartType,\n\t\t\t\t\tsettingsKey: 'isAggregate',\n\t\t\t\t\tstyles: { display: 'inline-block' },\n\t\t\t\t\toptions: [\n\t\t\t\t\t\t{ label: this.state.site, value: false },\n\t\t\t\t\t\t{ label: 'Aggregate', value: true }\n\t\t\t\t\t],\n\t\t\t\t\tcallback: isAggregate => {\n\t\t\t\t\t\tthis.settings.isAggregate = isAggregate\n\t\t\t\t\t\tconst id = this.sites.find(s => s.value == this.state.site)?.value\n\t\t\t\t\t\tconst value = isAggregate ? [] : [id]\n\t\t\t\t\t\tthis.setFilterValue(this.config.facilityTW.term.id, value)\n\t\t\t\t\t}\n\t\t\t\t}\n\t\t\t\tinputs.push(dataInput)\n\t\t\t}\n\t\t\tif (isAggregate || isRadarFacility) {\n\t\t\t\tinputs.push(\n\t\t\t\t\t...[\n\t\t\t\t\t\t{\n\t\t\t\t\t\t\tlabel: 'Region',\n\t\t\t\t\t\t\ttype: 'dropdown',\n\t\t\t\t\t\t\tchartType,\n\t\t\t\t\t\t\tsettingsKey: this.config.regionTW.term.id,\n\t\t\t\t\t\t\toptions: this.regions,\n\t\t\t\t\t\t\tcallback: value => this.setFilterValue(this.config.regionTW.term.id, value)\n\t\t\t\t\t\t},\n\t\t\t\t\t\t{\n\t\t\t\t\t\t\tlabel: 'Country',\n\t\t\t\t\t\t\ttype: 'dropdown',\n\t\t\t\t\t\t\tchartType,\n\t\t\t\t\t\t\tsettingsKey: this.config.countryTW.term.id,\n\t\t\t\t\t\t\toptions: this.countries,\n\t\t\t\t\t\t\tcallback: value => this.setFilterValue(this.config.countryTW.term.id, value)\n\t\t\t\t\t\t},\n\t\t\t\t\t\t{\n\t\t\t\t\t\t\tlabel: 'Income group',\n\t\t\t\t\t\t\ttype: 'dropdown',\n\t\t\t\t\t\t\tchartType,\n\t\t\t\t\t\t\tsettingsKey: this.config.incomeTW.term.id,\n\t\t\t\t\t\t\toptions: this.incomes,\n\t\t\t\t\t\t\tcallback: value => this.setFilterValue(this.config.incomeTW.term.id, value)\n\t\t\t\t\t\t},\n\t\t\t\t\t\t{\n\t\t\t\t\t\t\tlabel: 'Facility type',\n\t\t\t\t\t\t\ttype: 'dropdown',\n\t\t\t\t\t\t\tchartType,\n\t\t\t\t\t\t\tsettingsKey: this.config.typeTW.term.id,\n\t\t\t\t\t\t\toptions: this.types,\n\t\t\t\t\t\t\tcallback: value => this.setFilterValue(this.config.typeTW.term.id, value)\n\t\t\t\t\t\t},\n\t\t\t\t\t\t{\n\t\t\t\t\t\t\tlabel: this.config.teachingStatusTW.term.name,\n\t\t\t\t\t\t\ttype: 'dropdown',\n\t\t\t\t\t\t\tchartType,\n\t\t\t\t\t\t\tsettingsKey: this.config.teachingStatusTW.term.id,\n\t\t\t\t\t\t\toptions: this.teachingStates,\n\t\t\t\t\t\t\tcallback: value => this.setFilterValue(this.config.teachingStatusTW.term.id, value)\n\t\t\t\t\t\t},\n\t\t\t\t\t\t{\n\t\t\t\t\t\t\tlabel: this.config.referralStatusTW.term.name,\n\t\t\t\t\t\t\ttype: 'dropdown',\n\t\t\t\t\t\t\tchartType,\n\t\t\t\t\t\t\tsettingsKey: this.config.referralStatusTW.term.id,\n\t\t\t\t\t\t\toptions: this.referralStates,\n\t\t\t\t\t\t\tcallback: value => this.setFilterValue(this.config.referralStatusTW.term.id, value)\n\t\t\t\t\t\t},\n\t\t\t\t\t\t{\n\t\t\t\t\t\t\tlabel: this.config.fundingSourceTW.term.name,\n\t\t\t\t\t\t\ttype: 'dropdown',\n\t\t\t\t\t\t\tchartType,\n\t\t\t\t\t\t\tsettingsKey: this.config.fundingSourceTW.term.id,\n\t\t\t\t\t\t\toptions: this.fundingSources,\n\t\t\t\t\t\t\tcallback: value => this.setFilterValue(this.config.fundingSourceTW.term.id, value)\n\t\t\t\t\t\t},\n\t\t\t\t\t\t{\n\t\t\t\t\t\t\tlabel: this.config.hospitalVolumeTW.term.name,\n\t\t\t\t\t\t\ttype: 'dropdown',\n\t\t\t\t\t\t\tchartType,\n\t\t\t\t\t\t\tsettingsKey: this.config.hospitalVolumeTW.term.id,\n\t\t\t\t\t\t\toptions: this.hospitalVolumes,\n\t\t\t\t\t\t\tcallback: value => this.setFilterValue(this.config.hospitalVolumeTW.term.id, value)\n\t\t\t\t\t\t},\n\t\t\t\t\t\t{\n\t\t\t\t\t\t\tlabel: this.config.yearOfImplementationTW.term.name,\n\t\t\t\t\t\t\ttype: 'dropdown',\n\t\t\t\t\t\t\tchartType,\n\t\t\t\t\t\t\tsettingsKey: this.config.yearOfImplementationTW.term.id,\n\t\t\t\t\t\t\toptions: this.yearsOfImplementation,\n\t\t\t\t\t\t\tcallback: value => this.setFilterValue(this.config.yearOfImplementationTW.term.id, value)\n\t\t\t\t\t\t}\n\t\t\t\t\t]\n\t\t\t\t)\n\t\t\t}\n\t\t\tif (this.state.logged) {\n\t\t\t\tif (isAggregate && (this.state.sites?.length > 1 || this.state.user == 'admin')) {\n\t\t\t\t\tconst sitesInput = {\n\t\t\t\t\t\tlabel: 'Sites',\n\t\t\t\t\t\ttype: 'dropdown',\n\t\t\t\t\t\tchartType,\n\t\t\t\t\t\toptions: this.sites,\n\t\t\t\t\t\tmultiple: true,\n\t\t\t\t\t\tcallback: values => this.setFilterValue(this.config.facilityTW.term.id, values)\n\t\t\t\t\t}\n\t\t\t\t\tinputs.push(sitesInput)\n\t\t\t\t\tif (this.state.user != 'admin') inputs.unshift(userSitesFilterInput) //add filter by user sites only for non-admin users\n\t\t\t\t}\n\t\t\t\tif (isRadarFacility) {\n\t\t\t\t\tconst settings = { ...this.settings }\n\t\t\t\t\tsettings[this.config.facilityTW.term.id] = null //clear facility filter to get all the sites allowed\n\t\t\t\t\tconst filter = this.getFilterWithSettings(settings)\n\t\t\t\t\t//another request is needed to get the sample selected and populate the facility sites\n\t\t\t\t\tthis.sampleData = await this.app.vocabApi.getProfileScores({\n\t\t\t\t\t\tterms: [...this.twLst, this.config.facilityTW], //added facility term to all the plots to get the hospital name\n\t\t\t\t\t\tscoreTerms: this.scoreTerms,\n\t\t\t\t\t\tfilter, //filter excluding facility term\n\t\t\t\t\t\tfacilitySite: this.settings.facilitySite || null, //need to pass null not undefined, so the parameter is always passed to the server\n\t\t\t\t\t\tfacilityTW: this.config.facilityTW\n\t\t\t\t\t})\n\t\t\t\t\tthis.facilitySites = this.sampleData.sites\n\t\t\t\t\tconst facilitySite = this.settings.facilitySite\n\t\t\t\t\t\t? this.facilitySites.find(s => s.value == this.settings.facilitySite)\n\t\t\t\t\t\t: this.facilitySites[0]\n\t\t\t\t\tif (!facilitySite)\n\t\t\t\t\t\t//probably a session recovery\n\t\t\t\t\t\tthrow new Error(`Access to ${this.settings.facilitySite} facility not allowed`)\n\t\t\t\t\tfacilitySite.selected = true //mark selected facility site\n\n\t\t\t\t\tinputs.unshift({\n\t\t\t\t\t\tlabel: 'Facility site',\n\t\t\t\t\t\ttype: 'dropdown',\n\t\t\t\t\t\tchartType,\n\t\t\t\t\t\toptions: this.facilitySites,\n\t\t\t\t\t\tcallback: value => {\n\t\t\t\t\t\t\tthis.setFacilitySite(value)\n\t\t\t\t\t\t}\n\t\t\t\t\t})\n\t\t\t\t}\n\t\t\t}\n\n\t\t\tinputs.unshift(...additionalInputs)\n\t\t\tthis.components.controls = await controlsInit({\n\t\t\t\tapp: this.app,\n\t\t\t\tid: this.id,\n\t\t\t\tholder: this.dom.controlsDiv,\n\t\t\t\tinputs,\n\t\t\t\ttitle: 'Filters'\n\t\t\t})\n\t\t\tthis.components.controls.on(`downloadClick.${chartType}`, event => this.download(event))\n\t\t\tthis.components.controls.on(`helpClick.${chartType}`, () => {\n\t\t\t\tconst activeCohort = this.state.activeCohort\n\t\t\t\tlet link\n\t\t\t\tif (activeCohort == ABBREV_COHORT) {\n\t\t\t\t\tif (chartType == 'profileBarchart')\n\t\t\t\t\t\tlink =\n\t\t\t\t\t\t\t'https://global.stjude.org/content/dam/global/en-us/documents/no-index/bar-graph-abbr-profiledash.pdf'\n\t\t\t\t\telse if (chartType == 'profilePolar')\n\t\t\t\t\t\tlink =\n\t\t\t\t\t\t\t'https://global.stjude.org/content/dam/global/en-us/documents/no-index/polar-graph-abbr-profiledash.pdf'\n\t\t\t\t\telse if (chartType.startsWith('profileRadar'))\n\t\t\t\t\t\tlink = 'https://global.stjude.org/content/dam/global/en-us/documents/no-index/radar-abbr-profiledash.pdf'\n\t\t\t\t} else if (activeCohort == FULL_COHORT) {\n\t\t\t\t\tif (chartType == 'profileBarchart')\n\t\t\t\t\t\tlink =\n\t\t\t\t\t\t\t'https://global.stjude.org/content/dam/global/en-us/documents/no-index/bar-graph-full-profiledash.pdf'\n\t\t\t\t\telse if (chartType == 'profilePolar')\n\t\t\t\t\t\tlink =\n\t\t\t\t\t\t\t'https://global.stjude.org/content/dam/global/en-us/documents/no-index/polar-graph-full-profiledash.pdf'\n\t\t\t\t\telse if (chartType.startsWith('profileRadar'))\n\t\t\t\t\t\tlink = 'https://global.stjude.org/content/dam/global/en-us/documents/no-index/radar-full-profiledash.pdf'\n\t\t\t\t}\n\t\t\t\tif (link) window.open(link)\n\t\t\t})\n\t\t\tthis.filtersCount = 0\n\t\t} catch (e) {\n\t\t\tconsole.log(e)\n\t\t\tthrow e\n\t\t}\n\t}\n\n\tsetFilterValue(key, value) {\n\t\tconst config = this.config\n\t\tthis.settings[key] = value\n\t\tconfig.filter = this.getFilter()\n\t\tthis.app.dispatch({ type: 'plot_edit', id: this.id, config: this.config })\n\t}\n\n\tgetFilterWithSettings(settings) {\n\t\tlet filter = getCategoricalTermFilter(this.config.filterTWs, settings, null)\n\t\tfilter = getCombinedTermFilter(this.state, filter)\n\t\treturn filter.filter\n\t}\n\n\tgetFilter() {\n\t\tlet filter = getCategoricalTermFilter(this.config.filterTWs, this.settings, null)\n\t\tfilter = getCombinedTermFilter(this.state, filter)\n\t\treturn filter.filter\n\t}\n\n\tclearFiltersExcept(ids) {\n\t\tfor (const tw of this.config.filterTWs) if (!ids.includes(tw.term.id)) this.settings[tw.term.id] = ''\n\t}\n\n\tsetFacilitySite(site) {\n\t\tthis.settings.facilitySite = site\n\t\tthis.app.dispatch({ type: 'plot_edit', id: this.id, config: this.config })\n\t}\n\n\taddFilterLegend() {\n\t\tconst hasFilters = this.config.filterTWs.some(tw => this.settings[tw.term.id])\n\t\tconst title = hasFilters ? 'Filters' : 'No filter applied'\n\t\tthis.filterG\n\t\t\t.attr('font-size', '0.9em')\n\t\t\t.append('text')\n\t\t\t.attr('text-anchor', 'left')\n\t\t\t.style('font-weight', 'bold')\n\t\t\t.text(`${title} (n=${this.data.n})`)\n\t\t\t.attr('transform', `translate(0, -5)`)\n\t\tfor (const tw of this.config.filterTWs) this.addFilterLegendItem(tw.term.name, this.settings[tw.term.id])\n\t}\n\n\taddFilterLegendItem(filter, value) {\n\t\tif (!value || value?.length === 0) return\n\t\tthis.filtersCount++\n\t\tconst isArray = Array.isArray(value)\n\t\tlet text = isArray ? value.join(', ') : value\n\t\tif (text.length > 40) {\n\t\t\ttext = text.slice(0, 40) + '...'\n\t\t}\n\t\tconst itemG = this.filterG.append('g').attr('font-size', '0.95em')\n\t\tconst textElem = itemG\n\t\t\t.append('text')\n\t\t\t.attr('transform', `translate(0, ${this.filtersCount * 22})`)\n\t\t\t.attr('text-anchor', 'left')\n\t\ttextElem.append('tspan').attr('font-size', 'bold').text(`${filter}: `)\n\t\ttextElem.append('tspan').text(text)\n\t}\n\n\taddEndUserImpressionNote(uiG) {\n\t\tuiG.attr('font-size', '0.9em')\n\t\tlet textElem = uiG.append('text').attr('transform', `translate(0, 115)`)\n\t\ttextElem.append('tspan').attr('font-weight', 'bold').text('End-user Impression: ')\n\t\ttextElem.append('tspan').text('It is provided by the local liaison who completed the assessment ')\n\t\tuiG\n\t\t\t.append('text')\n\t\t\t.attr('transform', `translate(0, 140)`)\n\t\t\t.text('in consultation with the PHO medical director or directly by the PHO medical director.')\n\t\tuiG\n\t\t\t.append('text')\n\t\t\t.attr('transform', `translate(0, 165)`)\n\t\t\t.text('The end-user was asked to rate the current status of the domains and subdomains included.')\n\t}\n\n\taddPOCNote(uiG) {\n\t\tuiG.attr('font-size', '0.9em')\n\t\tlet textElem = uiG.append('text').attr('transform', `translate(0, 115)`)\n\t\ttextElem.append('tspan').attr('font-weight', 'bold').text('Point of Care (POC) Staff: ')\n\t\ttextElem.append('tspan').text('All members of the assessment team, ')\n\t\tuiG\n\t\t\t.append('text')\n\t\t\t.attr('transform', `translate(0, 140)`)\n\t\t\t.text('excluding the Site Coordinator. POC staff provide subjective information based ')\n\t\tuiG\n\t\t\t.append('text')\n\t\t\t.attr('transform', `translate(0, 165)`)\n\t\t\t.text('on their experience and perception about service delivery at the PHO facility.')\n\t}\n\n\taddLegendItem(category, description, index) {\n\t\tconst text = this.legendG\n\t\t\t.append('text')\n\t\t\t.attr('font-size', '0.9em')\n\t\t\t.attr('transform', `translate(0, ${index * 20})`)\n\t\t\t.attr('text-anchor', 'left')\n\t\ttext.append('tspan').attr('font-weight', 'bold').text(category)\n\t\ttext.append('tspan').text(`: ${description}`)\n\t}\n\n\tgetDownloadFilename() {\n\t\tthis.downloadCount++\n\t\tlet filename = `${this.type}${this.downloadCount}`\n\t\tfilename = filename.split(' ').join('_')\n\t\treturn filename\n\t}\n\n\tgetPercentage(d) {\n\t\tif (!d) return 0\n\t\tconst score = this.data.term2Score[d.score.term.id]\n\t\treturn score\n\t}\n\n\tasync download(event) {\n\t\tconst chartImages = this.getChartImages()\n\t\tconst menu = new DownloadMenu(chartImages, this.getDownloadFilename())\n\t\tmenu.show(event.clientX, event.clientY)\n\t}\n\n\tgetChartImages() {\n\t\tconst entries = Object.entries(this.components.plots)\n\t\tconst note = '\u00A9 2025 St. Jude Children\u2019s Research Hospital'\n\t\tlet name = entries.length > 0 ? 'Original' : ''\n\t\tname += ` ${note}`\n\t\tconst charts = [{ name, svg: this.dom.svg }]\n\t\tlet i = 1\n\t\tfor (const [key, plot] of entries) {\n\t\t\t//Adding comparison plots\n\t\t\tconst chartImages = plot.getChartImages()\n\n\t\t\tfor (const chartImage of chartImages) {\n\t\t\t\tconst svg = chartImage.svg\n\t\t\t\tconst name =\n\t\t\t\t\tchartImages.length > 1\n\t\t\t\t\t\t? `Comparison ${i}. ${chartImage.name} ${note}`\n\t\t\t\t\t\t: `Comparison ${chartImage.name} ${note}`\n\t\t\t\tcharts.push({ name, svg })\n\t\t\t}\n\t\t\ti++\n\t\t}\n\t\treturn charts\n\t}\n}\n\nexport function makeChartBtnMenu(holder, chartsInstance, chartType) {\n\t/*\n\tholder: the holder in the tooltip\n\tchartsInstance: MassCharts instance\n\t\ttermdbConfig is accessible at chartsInstance.state.termdbConfig{}\n\t\tmass option is accessible at chartsInstance.app.opts{}\n\t*/\n\tconst state = chartsInstance.state\n\tconst key = state.activeCohort == FULL_COHORT ? 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