@sjcrh/proteinpaint-client 2.103.0 → 2.104.1-0

package/dist/{2dmaf-LWX7TSIB.js → 2dmaf-MHMHRIB6.js}

@@ -1,6 +1,6 @@
 import {
   renderSandboxFormDiv
-} from "./chunk-HUWZTQX4.js";
+} from "./chunk-EUDPMMHS.js";
 import "./chunk-NAEANGSC.js";
 import {
   axisstyle,
@@ -1403,4 +1403,4 @@ export {
   d2mafparseinput,
   d2mafui
 };
-//# sourceMappingURL=2dmaf-LWX7TSIB.js.map
+//# sourceMappingURL=2dmaf-MHMHRIB6.js.map

package/dist/{AppHeader-EEIXG36I.js → AppHeader-ZK4ZUCQ3.js}

@@ -1,11 +1,11 @@
 import {
   makeButton,
   openSandbox
-} from "./chunk-3XPK3STO.js";
+} from "./chunk-WB3WNQGM.js";
 import {
   get_tklst
-} from "./chunk-D7S4OEGR.js";
-import "./chunk-7HE2PHYH.js";
+} from "./chunk-7WJ3LMYI.js";
+import "./chunk-OKAPIJJA.js";
 import "./chunk-FVJHFXDK.js";
 import "./chunk-MKAF2BHB.js";
 import {
@@ -16,10 +16,10 @@ import "./chunk-6MSAGRRE.js";
 import "./chunk-IQIXGTQV.js";
 import {
   block_init_default
-} from "./chunk-UFTQAXPD.js";
+} from "./chunk-R4TD272S.js";
 import {
   InputSearch
-} from "./chunk-BAIXOQAM.js";
+} from "./chunk-JJRVNRH3.js";
 import "./chunk-KZJ5M2MB.js";
 import "./chunk-PIKSNKBU.js";
 import "./chunk-CLHA5AEH.js";
@@ -31,7 +31,7 @@ import "./chunk-WTM3GD2X.js";
 import "./chunk-S6JPI6EN.js";
 import {
   newSandboxDiv
-} from "./chunk-HUWZTQX4.js";
+} from "./chunk-EUDPMMHS.js";
 import {
   string2pos
 } from "./chunk-ROQ5WSLC.js";
@@ -233,7 +233,7 @@ async function findgene2paint(str, app, genomename, jwt) {
       debugmode: app.debugmode
     };
     first_genetrack_tolist(g, par2.tklst);
-    import("./block-TNQDF6E6.js").then((b) => new b.Block(par2)).catch((err) => {
+    import("./block-5KLBWYJT.js").then((b) => new b.Block(par2)).catch((err) => {
       app.error0(err);
     });
     return;
@@ -839,7 +839,7 @@ var AppHeader = class _AppHeader {
         debugmode: app.debugmode
       };
       first_genetrack_tolist(g, par.tklst);
-      import("./block-TNQDF6E6.js").then((b) => new b.Block(par));
+      import("./block-5KLBWYJT.js").then((b) => new b.Block(par));
       app.drawer.dispatch({ type: "is_apps_btn_active", value: false });
     });
     return g_browser_btn;
@@ -852,4 +852,4 @@ var AppHeader = class _AppHeader {
 export {
   AppHeader
 };
-//# sourceMappingURL=AppHeader-EEIXG36I.js.map
+//# sourceMappingURL=AppHeader-ZK4ZUCQ3.js.map

package/dist/{DEanalysis-R7R7YDQ6.js → DEanalysis-BYJHSWNL.js}

@@ -1,14 +1,14 @@
 import "./chunk-WNY53ILR.js";
 import {
   controlsInit
-} from "./chunk-UKBBHK6A.js";
-import "./chunk-ZM3ZWAEE.js";
+} from "./chunk-SCXMVUUV.js";
+import "./chunk-6V6Z7T2K.js";
 import "./chunk-ORU5KRBU.js";
 import {
   axisstyle,
   downloadTable,
   renderTable
-} from "./chunk-BAIXOQAM.js";
+} from "./chunk-JJRVNRH3.js";
 import "./chunk-KZJ5M2MB.js";
 import "./chunk-PIKSNKBU.js";
 import "./chunk-CLHA5AEH.js";
@@ -18,7 +18,7 @@ import "./chunk-Z5YNQ6VV.js";
 import "./chunk-PDFIPQC3.js";
 import "./chunk-WTM3GD2X.js";
 import "./chunk-S6JPI6EN.js";
-import "./chunk-HUWZTQX4.js";
+import "./chunk-EUDPMMHS.js";
 import "./chunk-ROQ5WSLC.js";
 import "./chunk-NAEANGSC.js";
 import "./chunk-3EFQHXEV.js";
@@ -659,4 +659,4 @@ export {
   makeChartBtnMenu,
   openHiercluster
 };
-//# sourceMappingURL=DEanalysis-R7R7YDQ6.js.map
+//# sourceMappingURL=DEanalysis-BYJHSWNL.js.map

package/dist/{Disco-HHJWTIKO.js → Disco-YIY6GRZL.js}

@@ -1,12 +1,12 @@
 import {
   configUiInit
-} from "./chunk-ZM3ZWAEE.js";
+} from "./chunk-6V6Z7T2K.js";
 import {
   topBarInit
 } from "./chunk-ORU5KRBU.js";
 import {
   svgLegend
-} from "./chunk-BAIXOQAM.js";
+} from "./chunk-JJRVNRH3.js";
 import "./chunk-KZJ5M2MB.js";
 import "./chunk-PIKSNKBU.js";
 import "./chunk-CLHA5AEH.js";
@@ -16,7 +16,7 @@ import "./chunk-Z5YNQ6VV.js";
 import "./chunk-PDFIPQC3.js";
 import "./chunk-WTM3GD2X.js";
 import "./chunk-S6JPI6EN.js";
-import "./chunk-HUWZTQX4.js";
+import "./chunk-EUDPMMHS.js";
 import "./chunk-ROQ5WSLC.js";
 import "./chunk-NAEANGSC.js";
 import "./chunk-3EFQHXEV.js";
@@ -112,11 +112,13 @@ var FusionColorProvider = class {
 var FusionRenderer = class {
   render(holder, fusions) {
     let radius = 0;
-    if (fusions.length > 0) {
-      radius = fusions[0].target.radius;
+    const fusionsWithTarget = fusions.filter((f) => f.target);
+    if (fusionsWithTarget.length > 0) {
+      radius = fusionsWithTarget[0].target.radius;
       const fullArcRenderer = new FullArcRenderer(radius, 2, "#6464641A");
       fullArcRenderer.render(holder);
-    }
+    } else
+      return;
     const ribboon = ribbon_default().radius(radius);
     const ribbons = holder.selectAll(".chord").data(fusions);
     const menu = MenuProvider.create();
@@ -230,7 +232,7 @@ var DiscoInteractions = class {
           }
         ]
       };
-      const _ = await import("./block.init-X7L2KXF2.js");
+      const _ = await import("./block.init-RXSOPI2A.js");
       await _.default(arg);
     };
     this.colorScaleNumericInputsCallback = async (obj) => {
@@ -456,7 +458,7 @@ var DataMapper = class _DataMapper {
           this.addData(dObject, dataArray);
         }
       } else if (dObject.dt == dtfusionrna || dObject.dt == dtsv) {
-        if (indexA != -1 && indexB != -1) {
+        if (indexA != -1 || indexB != -1) {
           this.addData(dObject, dataArray);
         }
       } else if ([dtcnv, dtloh].includes(Number(dObject.dt))) {
@@ -705,19 +707,22 @@ var FusionMapper = class {
         },
         data.strandA
       );
-      const target = new FusionSubgroup(
-        this.calculateStartAngle(data.chrB, data.posB),
-        this.calculateEndAngle(data.chrB, data.posB),
-        this.radius,
-        data.geneB,
-        data.value,
-        genes,
-        {
-          chromosome: data.chrB,
-          position: data.posB
-        },
-        data.strandB
-      );
+      let target;
+      if (data.chrB && data.posB) {
+        target = new FusionSubgroup(
+          this.calculateStartAngle(data.chrB, data.posB),
+          this.calculateEndAngle(data.chrB, data.posB),
+          this.radius,
+          data.geneB,
+          data.value,
+          genes,
+          {
+            chromosome: data.chrB,
+            position: data.posB
+          },
+          data.strandB
+        );
+      }
       const fusion = new Fusion(source, target, "genes", -1, "Endpoints");
       fusions.push(fusion);
     });
@@ -2073,8 +2078,8 @@ var LabelsRenderer = class {
         const [td12, td22] = table.addRow();
         td12.text("Break points");
         td22.append("span").text(
-          ` ${fusionTooltip.geneA ? fusionTooltip.geneA : ""} ${fusionTooltip.chrA}:${fusionTooltip.posA} 
-						${fusionTooltip.strandA == "+" ? "forward" : "reverse"} > ${fusionTooltip.geneB ? fusionTooltip.geneB : ""} ${fusionTooltip.chrB}:${fusionTooltip.posB} ${fusionTooltip.strandB == "+" ? "forward" : "reverse"} `
+          ` ${fusionTooltip.geneA ? fusionTooltip.geneA : "?"} ${fusionTooltip.chrA}:${fusionTooltip.posA}
+						${fusionTooltip.strandA == "+" ? "forward" : "reverse"} > ${fusionTooltip.geneB ? fusionTooltip.geneB : "?"} ${fusionTooltip.chrB}:${fusionTooltip.posB} ${fusionTooltip.strandB == "+" ? "forward" : "reverse"} `
         );
       });
     }
@@ -2502,4 +2507,4 @@ export {
   discoInit,
   getPlotConfig
 };
-//# sourceMappingURL=Disco-HHJWTIKO.js.map
+//# sourceMappingURL=Disco-YIY6GRZL.js.map