@sixb/sqlite 0.1.2 → 0.1.4

package/dist/migrations.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"migrations.d.ts","sourceRoot":"","sources":["../src/migrations.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAIrC,OAAO,KAAK,EAAE,eAAe,EAAE,MAAM,YAAY,CAAA;AACjD,OAAO,KAAK,EAGV,YAAY,EACZ,aAAa,EACb,oBAAoB,EACrB,MAAM,oBAAoB,CAAA;AAiF3B,eAAO,MAAM,yBAAyB,sBAAsB,CAAA;AAC5D,eAAO,MAAM,mBAAmB,mBAAmB,CAAA;AAEnD,eAAO,MAAM,uBAAuB,wBAmElC,CAAA;AAEF,wBAAgB,iBAAiB,CAAC,QAAQ,EAAE,MAAM,GAAG,MAAM,CAE1D;AAED,wBAAgB,SAAS,CAAC,EAAE,EAAE,MAAM,EAAE,OAAO,EAAE,MAAM,GAAG,aAAa,CAAC,QAAQ,CAAC,CAQ9E;AAED,wBAAgB,UAAU,CACxB,EAAE,EAAE,MAAM,EACV,EAAE,EAAE,CAAC,EAAE,EAAE,QAAQ,KAAK,IAAI,GAAG,OAAO,CAAC,IAAI,CAAC,EAC1C,OAAO,GAAE,oBAAyB,GACjC,aAAa,CAAC,QAAQ,CAAC,CAEzB;AAED,wBAAgB,wBAAwB,CAAC,EAAE,EAAE,QAAQ,GAAG,IAAI,CAS3D;AAED,wBAAgB,4BAA4B,CAAC,QAAQ,EAAE,MAAM,GAAG,SAAS,eAAe,EAAE,CAOzF;AAED,wBAAgB,oBAAoB,CAAC,MAAM,EAAE;IAC3C,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAA;IACrB,QAAQ,CAAC,UAAU,EAAE,YAAY,CAAC,QAAQ,CAAC,CAAA;CAC5C,GAAG,eAAe,CAoBlB;AAED,wBAAsB,oBAAoB,CAAC,QAAQ,EAAE,MAAM,GAAG,OAAO,CAAC,IAAI,CAAC,CAM1E"}

package/dist/object-storage.d.ts

@@ -1,4 +1,4 @@
-import type { CountObjectsInput, CountObjectsResult, ExistsObjectsInput, ExistsObjectsResult, FacetObjectsInput, FacetObjectsResult, LinkDirection, ObjectLinkRow, ObjectQueryCapabilities, ObjectRow, ObjectStorage, QueryObjectsInput, QueryObjectsResult } from "@sixb/core/storage";
+import type { CountObjectsInput, CountObjectsResult, ExistsObjectsInput, ExistsObjectsResult, FacetObjectsInput, FacetObjectsResult, LinkBatchKey, LinkDirection, ObjectBatchKey, ObjectLinkRow, ObjectQueryCapabilities, ObjectRow, ObjectStorage, QueryObjectLinksInput, QueryObjectLinksResult, QueryObjectsInput, QueryObjectsResult } from "@sixb/core/storage";
 import { type SqliteStoreConnection } from "./transactions";
 export interface SqliteObjectStorageOptions {
     /** Path to SQLite database file. Defaults to ':memory:' for in-memory database. */
@@ -39,7 +39,7 @@ export declare class SqliteObjectStorage implements ObjectStorage {
             objectTypeId: string;
             primaryId: string;
         }[];
-    }): Promise<Map<string, ObjectRow>>;
+    }): Promise<Map<ObjectBatchKey, ObjectRow>>;
     listLinksBatch(params: {
         projectId: string;
         items: readonly {
@@ -47,7 +47,8 @@ export declare class SqliteObjectStorage implements ObjectStorage {
             objectId: string;
             linkId: string;
         }[];
-    }): Promise<Map<string, ObjectLinkRow[]>>;
+    }): Promise<Map<LinkBatchKey, ObjectLinkRow[]>>;
+    queryLinks(params: QueryObjectLinksInput): Promise<QueryObjectLinksResult>;
     listIncidentLinksBatch(params: {
         projectId: string;
         items: readonly {

package/dist/object-storage.d.ts.map

@@ -1 +1 @@
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package/dist/ontology-storage/materialization-state.d.ts.map

@@ -1 +1 @@
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package/dist/ontology-storage/materialization-writer.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"materialization-writer.d.ts","sourceRoot":"","sources":["../../src/ontology-storage/materialization-writer.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAQ1C,OAAO,KAAK,EAGV,wBAAwB,EACzB,MAAM,oBAAoB,CAAA;AAa3B,iFAAiF;AACjF,qBAAa,2BAA2B;IAC1B,OAAO,CAAC,QAAQ,CAAC,EAAE;gBAAF,EAAE,EAAE,QAAQ;IAEzC,KAAK,CAAC,SAAS,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,EAAE,KAAK,EAAE,wBAAwB,GAAG,IAAI;IAOjF,OAAO,CAAC,cAAc;IA2KtB,OAAO,CAAC,cAAc;IA+CtB,OAAO,CAAC,WAAW;IA2DnB,OAAO,CAAC,SAAS;IA8DjB,OAAO,CAAC,eAAe;IA8DvB,OAAO,CAAC,WAAW;CA+BpB"}
+{"version":3,"file":"materialization-writer.d.ts","sourceRoot":"","sources":["../../src/ontology-storage/materialization-writer.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAQ1C,OAAO,KAAK,EAGV,wBAAwB,EACzB,MAAM,oBAAoB,CAAA;AAa3B,iFAAiF;AACjF,qBAAa,2BAA2B;IAC1B,OAAO,CAAC,QAAQ,CAAC,EAAE;gBAAF,EAAE,EAAE,QAAQ;IAEzC,KAAK,CAAC,SAAS,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,EAAE,KAAK,EAAE,wBAAwB,GAAG,IAAI;IAOjF,OAAO,CAAC,cAAc;IA8KtB,OAAO,CAAC,cAAc;IA+CtB,OAAO,CAAC,WAAW;IA2DnB,OAAO,CAAC,SAAS;IA8DjB,OAAO,CAAC,eAAe;IA8DvB,OAAO,CAAC,WAAW;CA+BpB"}

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@sixb/sqlite",
-  "version": "0.1.2",
+  "version": "0.1.4",
   "description": "SQLite storage provider for Sixb",
   "keywords": [
     "sixb",
@@ -36,10 +36,10 @@
     "prepack": "bun run build"
   },
   "peerDependencies": {
-    "@sixb/core": "0.1.2"
+    "@sixb/core": "0.1.4"
   },
   "devDependencies": {
-    "@sixb/core": "0.1.2",
+    "@sixb/core": "0.1.4",
     "@types/bun": "latest",
     "typescript": "^5.7.0"
   },

package/src/agents/agent-storage.ts

@@ -5,6 +5,7 @@ import {
   openSqliteStoreConnection,
   type SqliteStoreConnection,
 } from "../transactions"
+import { SqliteAgentContextCheckpointStore } from "./checkpoints"
 import { SqliteAgentMessageStore } from "./messages"
 import { SqliteAgentRunStore } from "./runs"
 import { SqliteAgentThreadStore } from "./threads"
@@ -19,14 +20,15 @@ export interface SqliteAgentStorageOptions {
 }
 
 /**
- * SQLite-backed agent persistence: thread / run / message sub-stores sharing one connection. The
- * cross-table writes (reserve + finish touch the thread anchor, append bumps thread stats) run in
- * SQLite transactions; the bundled {@link SqliteStorage} serializes all of them on one connection.
+ * SQLite-backed agent persistence: thread, run, message, and context-checkpoint sub-stores sharing
+ * one connection. Cross-table writes run in SQLite transactions; the bundled {@link SqliteStorage}
+ * serializes them for single-flight and checkpoint compare-and-swap safety.
  */
 export class SqliteAgentStorage implements AgentStorage {
   readonly threads: SqliteAgentThreadStore
   readonly runs: SqliteAgentRunStore
   readonly messages: SqliteAgentMessageStore
+  readonly checkpoints: SqliteAgentContextCheckpointStore
 
   private readonly connection: SqliteStoreConnection
 
@@ -40,6 +42,7 @@ export class SqliteAgentStorage implements AgentStorage {
     this.threads = new SqliteAgentThreadStore(this.connection.db)
     this.runs = new SqliteAgentRunStore(this.connection.db, options.executions)
     this.messages = new SqliteAgentMessageStore(this.connection.db)
+    this.checkpoints = new SqliteAgentContextCheckpointStore(this.connection.db)
   }
 
   close(): void {

package/src/agents/checkpoints.ts

@@ -0,0 +1,205 @@
+import type { Database } from "bun:sqlite"
+import {
+  agentContextCheckpointMatchesCreateInput,
+  assertAgentContextCheckpointAnchors,
+  assertAgentContextCheckpointAuthority,
+  assertAgentContextCheckpointReplayState,
+  assertCreateAgentContextCheckpointInput,
+} from "@sixb/core/internal/agent-run-storage-provider"
+import {
+  type AgentContextCheckpointRecord,
+  type AgentContextCheckpointStore,
+  AgentStorageError,
+  type CreateAgentContextCheckpointInput,
+} from "@sixb/core/storage"
+import {
+  type AgentContextCheckpointRow,
+  type AgentMessageRow,
+  type AgentRunRow,
+  type AgentThreadRow,
+  rowToContextCheckpointRecord,
+  rowToMessageRecord,
+  rowToRunRecord,
+  rowToThreadRecord,
+} from "./rows"
+
+const SQLITE_CHECKPOINT_RUN_ID_BATCH_SIZE = 500
+
+export class SqliteAgentContextCheckpointStore implements AgentContextCheckpointStore {
+  constructor(private readonly db: Database) {}
+
+  async create(input: CreateAgentContextCheckpointInput): Promise<AgentContextCheckpointRecord> {
+    assertCreateAgentContextCheckpointInput(input, "SixbSqlite")
+
+    return this.db.transaction(() => {
+      const runRow = this.db
+        .query("SELECT * FROM agent_runs WHERE project_id = ? AND id = ?")
+        .get(input.projectId, input.createdByRunId) as AgentRunRow | null
+      const threadRow = this.db
+        .query("SELECT * FROM agent_threads WHERE project_id = ? AND id = ?")
+        .get(input.projectId, input.threadId) as AgentThreadRow | null
+      assertAgentContextCheckpointAuthority({
+        create: input,
+        run: runRow ? rowToRunRecord(runRow) : null,
+        thread: threadRow ? rowToThreadRecord(threadRow) : null,
+        prefix: "SixbSqlite",
+      })
+
+      const latest = this.findLatest(input.projectId, input.threadId)
+      const headRow = this.db
+        .query(
+          "SELECT COALESCE(MAX(seq), 0) AS seq FROM agent_messages WHERE project_id = ? AND thread_id = ?"
+        )
+        .get(input.projectId, input.threadId) as { seq: number }
+
+      const existingForRun = this.db
+        .query(
+          "SELECT * FROM agent_context_checkpoints WHERE project_id = ? AND created_by_run_id = ?"
+        )
+        .get(input.projectId, input.createdByRunId) as AgentContextCheckpointRow | null
+      if (existingForRun) {
+        const record = rowToContextCheckpointRecord(existingForRun)
+        if (agentContextCheckpointMatchesCreateInput(record, input)) {
+          assertAgentContextCheckpointReplayState({
+            create: input,
+            existing: record,
+            latest,
+            headSeq: headRow.seq,
+            prefix: "SixbSqlite",
+          })
+          return record
+        }
+        throw new AgentStorageError(
+          "invalid_state",
+          `[SixbSqlite] Agent run '${input.createdByRunId}' already created a different context checkpoint.`
+        )
+      }
+
+      const duplicateId = this.db
+        .query("SELECT 1 FROM agent_context_checkpoints WHERE project_id = ? AND id = ?")
+        .get(input.projectId, input.id)
+      if (duplicateId) {
+        throw new AgentStorageError(
+          "duplicate_id",
+          `[SixbSqlite] Agent context checkpoint '${input.id}' already exists for project '${input.projectId}'.`
+        )
+      }
+
+      const firstRetainedRow = this.db
+        .query(
+          "SELECT * FROM agent_messages WHERE project_id = ? AND thread_id = ? AND seq > ? ORDER BY seq ASC LIMIT 1"
+        )
+        .get(input.projectId, input.threadId, input.summarizedThroughSeq) as AgentMessageRow | null
+      assertAgentContextCheckpointAnchors({
+        create: input,
+        latest,
+        headSeq: headRow.seq,
+        firstRetained: firstRetainedRow ? rowToMessageRecord(firstRetainedRow) : null,
+        prefix: "SixbSqlite",
+      })
+
+      const createdAt = input.createdAt ?? new Date()
+      this.db
+        .query(
+          `
+            INSERT INTO agent_context_checkpoints (
+              project_id,
+              id,
+              thread_id,
+              created_by_run_id,
+              previous_checkpoint_id,
+              reason,
+              summary,
+              summary_format_version,
+              summarized_through_seq,
+              observed_head_seq,
+              estimated_input_tokens_before,
+              estimated_input_tokens_after,
+              summary_model_id,
+              created_at
+            ) VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?)
+          `
+        )
+        .run(
+          input.projectId,
+          input.id,
+          input.threadId,
+          input.createdByRunId,
+          input.expectedPreviousCheckpointId,
+          input.reason,
+          input.summary,
+          input.summaryFormatVersion,
+          input.summarizedThroughSeq,
+          input.observedHeadSeq,
+          input.estimatedInputTokensBefore,
+          input.estimatedInputTokensAfter,
+          input.summaryModelId,
+          createdAt.toISOString()
+        )
+
+      return this.requireById(input.projectId, input.id)
+    })()
+  }
+
+  async getLatest(input: {
+    readonly projectId: string
+    readonly threadId: string
+  }): Promise<AgentContextCheckpointRecord | null> {
+    return this.findLatest(input.projectId, input.threadId)
+  }
+
+  async getByRunIds(input: {
+    readonly projectId: string
+    readonly runIds: readonly string[]
+  }): Promise<readonly AgentContextCheckpointRecord[]> {
+    const runIds = [...new Set(input.runIds)]
+    if (runIds.length === 0) return []
+
+    const rows: AgentContextCheckpointRow[] = []
+    for (let offset = 0; offset < runIds.length; offset += SQLITE_CHECKPOINT_RUN_ID_BATCH_SIZE) {
+      const batch = runIds.slice(offset, offset + SQLITE_CHECKPOINT_RUN_ID_BATCH_SIZE)
+      const placeholders = batch.map(() => "?").join(", ")
+      rows.push(
+        ...(this.db
+          .query(
+            `SELECT * FROM agent_context_checkpoints WHERE project_id = ? AND created_by_run_id IN (${placeholders})`
+          )
+          .all(input.projectId, ...batch) as AgentContextCheckpointRow[])
+      )
+    }
+    const byRunId = new Map(
+      rows.map((row) => [row.created_by_run_id, rowToContextCheckpointRecord(row)] as const)
+    )
+    return runIds.flatMap((runId) => {
+      const checkpoint = byRunId.get(runId)
+      return checkpoint ? [checkpoint] : []
+    })
+  }
+
+  private findLatest(projectId: string, threadId: string): AgentContextCheckpointRecord | null {
+    const row = this.db
+      .query(
+        `
+          SELECT * FROM agent_context_checkpoints
+          WHERE project_id = ? AND thread_id = ?
+          ORDER BY summarized_through_seq DESC, created_at DESC, id DESC
+          LIMIT 1
+        `
+      )
+      .get(projectId, threadId) as AgentContextCheckpointRow | null
+    return row ? rowToContextCheckpointRecord(row) : null
+  }
+
+  private requireById(projectId: string, id: string): AgentContextCheckpointRecord {
+    const row = this.db
+      .query("SELECT * FROM agent_context_checkpoints WHERE project_id = ? AND id = ?")
+      .get(projectId, id) as AgentContextCheckpointRow | null
+    if (!row) {
+      throw new AgentStorageError(
+        "invalid_state",
+        `[SixbSqlite] Failed to load agent context checkpoint '${id}' for project '${projectId}'.`
+      )
+    }
+    return rowToContextCheckpointRecord(row)
+  }
+}

package/src/agents/index.ts

@@ -1,5 +1,6 @@
 export type { SqliteAgentStorageOptions } from "./agent-storage"
 export { SqliteAgentStorage } from "./agent-storage"
+export { SqliteAgentContextCheckpointStore } from "./checkpoints"
 export { SqliteAgentMessageStore } from "./messages"
 export { SqliteAgentRunStore } from "./runs"
 export { SqliteAgentThreadStore } from "./threads"

package/src/agents/messages.ts

@@ -5,6 +5,7 @@ import {
   type AgentMessageStore,
   AgentStorageError,
   type AppendAgentMessageInput,
+  type DeleteAgentMessagesByRunInput,
   type ListAgentMessagesInput,
   type ListAgentMessagesResult,
 } from "@sixb/core/storage"
@@ -110,6 +111,59 @@ export class SqliteAgentMessageStore implements AgentMessageStore {
     })()
   }
 
+  async deleteByRunId(input: DeleteAgentMessagesByRunInput): Promise<number> {
+    return this.db.transaction(() => {
+      const thread = this.db
+        .query("SELECT 1 AS present FROM agent_threads WHERE project_id = ? AND id = ?")
+        .get(input.projectId, input.threadId) as { present: number } | null
+
+      if (!thread) {
+        throw new AgentStorageError(
+          "thread_not_found",
+          `[SixbSqlite] Agent thread '${input.threadId}' not found for project '${input.projectId}'.`
+        )
+      }
+
+      const deleted = this.db
+        .query("DELETE FROM agent_messages WHERE project_id = ? AND thread_id = ? AND run_id = ?")
+        .run(input.projectId, input.threadId, input.runId)
+      if (deleted.changes === 0) {
+        return 0
+      }
+
+      const updatedAt = new Date().toISOString()
+      this.db
+        .query(
+          `
+          UPDATE agent_threads
+          SET
+            message_count = (
+              SELECT COUNT(*) FROM agent_messages WHERE project_id = ? AND thread_id = ?
+            ),
+            last_message_at = (
+              SELECT created_at FROM agent_messages
+              WHERE project_id = ? AND thread_id = ?
+              ORDER BY seq DESC
+              LIMIT 1
+            ),
+            updated_at = ?
+          WHERE project_id = ? AND id = ?
+        `
+        )
+        .run(
+          input.projectId,
+          input.threadId,
+          input.projectId,
+          input.threadId,
+          updatedAt,
+          input.projectId,
+          input.threadId
+        )
+
+      return deleted.changes
+    })()
+  }
+
   async getById(params: { projectId: string; id: string }): Promise<AgentMessageRecord | null> {
     const row = this.db
       .query("SELECT * FROM agent_messages WHERE project_id = ? AND id = ?")
@@ -126,6 +180,11 @@ export class SqliteAgentMessageStore implements AgentMessageStore {
     const whereClauses = ["project_id = ?", "thread_id = ?"]
     const args: SqliteValue[] = [input.projectId, input.threadId]
 
+    if (input.afterSeq !== undefined) {
+      whereClauses.push("seq > ?")
+      args.push(input.afterSeq)
+    }
+
     if (input.roles) {
       whereClauses.push(`role IN (${input.roles.map(() => "?").join(", ")})`)
       args.push(...input.roles)

package/src/agents/rows.ts

@@ -3,6 +3,7 @@ import type { AgentMessagePart, Principal } from "@sixb/core"
 import { parseSixbFailure } from "@sixb/core/internal/errors"
 import {
   AGENT_RUN_FAILURE_CODES,
+  type AgentContextCheckpointRecord,
   type AgentMessageRecord,
   type AgentRunDiagnostic,
   type AgentRunRecord,
@@ -65,6 +66,23 @@ export interface AgentMessageRow {
   completed_at: string | null
 }
 
+export interface AgentContextCheckpointRow {
+  project_id: string
+  id: string
+  thread_id: string
+  created_by_run_id: string
+  previous_checkpoint_id: string | null
+  reason: AgentContextCheckpointRecord["reason"]
+  summary: string
+  summary_format_version: number
+  summarized_through_seq: number
+  observed_head_seq: number
+  estimated_input_tokens_before: number
+  estimated_input_tokens_after: number
+  summary_model_id: string
+  created_at: string
+}
+
 // ── row → record mappers ────────────────────────────────────────────────────────────────────────
 
 export function rowToThreadRecord(row: AgentThreadRow): AgentThreadRecord {
@@ -131,6 +149,32 @@ export function rowToMessageRecord(row: AgentMessageRow): AgentMessageRecord {
   }
 }
 
+export function rowToContextCheckpointRecord(
+  row: AgentContextCheckpointRow
+): AgentContextCheckpointRecord {
+  if (row.summary_format_version !== 1) {
+    throw new Error(
+      `[SixbSqlite] Unsupported agent context checkpoint summary format version '${row.summary_format_version}'.`
+    )
+  }
+  return {
+    id: row.id,
+    projectId: row.project_id,
+    threadId: row.thread_id,
+    createdByRunId: row.created_by_run_id,
+    previousCheckpointId: row.previous_checkpoint_id ?? undefined,
+    reason: row.reason,
+    summary: row.summary,
+    summaryFormatVersion: 1,
+    summarizedThroughSeq: row.summarized_through_seq,
+    observedHeadSeq: row.observed_head_seq,
+    estimatedInputTokensBefore: row.estimated_input_tokens_before,
+    estimatedInputTokensAfter: row.estimated_input_tokens_after,
+    summaryModelId: row.summary_model_id,
+    createdAt: new Date(row.created_at),
+  }
+}
+
 function principalFromColumns(
   type: Principal["type"] | null | undefined,
   id: string | null | undefined