@sixb/sqlite 0.1.0 → 0.1.1

package/dist/migrations.d.ts.map

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package/dist/ontology-storage/materialization-state.d.ts.map

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package/dist/workflow-run-storage.d.ts.map

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+{"version":3,"file":"workflow-run-storage.d.ts","sourceRoot":"","sources":["../src/workflow-run-storage.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAG1C,OAAO,KAAK,EACV,+BAA+B,EAC/B,kDAAkD,EAClD,yCAAyC,EACzC,+BAA+B,EAC/B,+BAA+B,EAC/B,0BAA0B,EAC1B,sBAAsB,EACtB,2BAA2B,EAC3B,4BAA4B,EAC5B,8BAA8B,EAC9B,+BAA+B,EAC/B,yBAAyB,EACzB,0BAA0B,EAC1B,qBAAqB,EACrB,sBAAsB,EACtB,qBAAqB,EACrB,gCAAgC,EAChC,uBAAuB,EACvB,sBAAsB,EACtB,8BAA8B,EAC9B,yBAAyB,EACzB,qBAAqB,EACrB,wBAAwB,EACxB,oBAAoB,EACpB,0BAA0B,EAC1B,2BAA2B,EAC3B,qBAAqB,EACrB,sBAAsB,EACtB,iBAAiB,EACjB,kBAAkB,EACnB,MAAM,oBAAoB,CAAA;AAW3B,OAAO,EAGL,KAAK,qBAAqB,EAC3B,MAAM,gBAAgB,CAAA;AAEvB,MAAM,WAAW,+BAA+B;IAC9C,mFAAmF;IACnF,IAAI,CAAC,EAAE,MAAM,CAAA;IACb,gEAAgE;IAChE,UAAU,CAAC,EAAE,qBAAqB,CAAA;CACnC;AAED,qBAAa,wBAAyB,YAAW,kBAAkB;IACjE,QAAQ,CAAC,KAAK,EAAE,4BAA4B,CAAA;IAC5C,QAAQ,CAAC,UAAU,EAAE,iCAAiC,CAAA;IAEtD,OAAO,CAAC,QAAQ,CAAC,UAAU,CAAuB;IAClD,OAAO,CAAC,QAAQ,CAAC,EAAE,CAAU;gBAEjB,OAAO,GAAE,+BAAoC;IAYnD,KAAK,CAAC,KAAK,EAAE,qBAAqB,GAAG,OAAO,CAAC,iBAAiB,CAAC;IAgD/D,KAAK,CAAC,KAAK,EAAE,qBAAqB,GAAG,OAAO,CAAC,iBAAiB,CAAC;IAmG/D,OAAO,CAAC,KAAK,EAAE,uBAAuB,GAAG,OAAO,CAAC,iBAAiB,CAAC;IAmBnE,yBAAyB,CAC7B,KAAK,EAAE,yCAAyC,GAC/C,OAAO,CAAC,iBAAiB,CAAC;IAqBvB,MAAM,CAAC,KAAK,EAAE,sBAAsB,GAAG,OAAO,CAAC,iBAAiB,CAAC;IAkDjE,IAAI,CAAC,KAAK,EAAE,oBAAoB,GAAG,OAAO,CAAC,iBAAiB,CAAC;IAqC7D,MAAM,CAAC,KAAK,EAAE,sBAAsB,GAAG,OAAO,CAAC,iBAAiB,CAAC;IA0CjE,OAAO,CAAC,MAAM,EAAE;QAAE,SAAS,EAAE,MAAM,CAAC;QAAC,EAAE,EAAE,MAAM,CAAA;KAAE,GAAG,OAAO,CAAC,iBAAiB,GAAG,IAAI,CAAC;IAQrF,IAAI,CAAC,KAAK,EAAE,qBAAqB,GAAG,OAAO,CAAC,sBAAsB,CAAC;IAyCnE,uBAAuB,CAC3B,KAAK,EAAE,2BAA2B,GACjC,OAAO,CAAC,4BAA4B,CAAC;IAexC,KAAK,IAAI,IAAI;IAIb,OAAO,CAAC,kBAAkB;IAc1B,OAAO,CAAC,aAAa;CAgBtB;AAED,qBAAa,iCAAkC,YAAW,2BAA2B;IACvE,OAAO,CAAC,QAAQ,CAAC,EAAE;gBAAF,EAAE,EAAE,QAAQ;IAEnC,MAAM,CAAC,KAAK,EAAE,+BAA+B,GAAG,OAAO,CAAC,0BAA0B,CAAC;IA4BnF,KAAK,CAAC,KAAK,EAAE,8BAA8B,GAAG,OAAO,CAAC,0BAA0B,CAAC;IAyBjF,OAAO,CAAC,KAAK,EAAE,gCAAgC,GAAG,OAAO,CAAC,0BAA0B,CAAC;IAoBrF,yBAAyB,CAC7B,KAAK,EAAE,kDAAkD,GACxD,OAAO,CAAC,0BAA0B,CAAC;IAqBhC,MAAM,CAAC,KAAK,EAAE,+BAA+B,GAAG,OAAO,CAAC,0BAA0B,CAAC;IA4BnF,MAAM,CAAC,KAAK,EAAE,+BAA+B,GAAG,OAAO,CAAC,0BAA0B,CAAC;IAyBnF,cAAc,CAAC,MAAM,EAAE;QAC3B,SAAS,EAAE,MAAM,CAAA;QACjB,SAAS,EAAE,MAAM,CAAA;KAClB,GAAG,OAAO,CAAC,0BAA0B,GAAG,IAAI,CAAC;IAOxC,IAAI,CAAC,KAAK,EAAE,8BAA8B,GAAG,OAAO,CAAC,+BAA+B,CAAC;IAqB3F,OAAO,CAAC,OAAO;IAYf,OAAO,CAAC,aAAa;CAoBtB;AAED,qBAAa,4BAA6B,YAAW,sBAAsB;IAC7D,OAAO,CAAC,QAAQ,CAAC,EAAE;gBAAF,EAAE,EAAE,QAAQ;IAEnC,KAAK,CAAC,KAAK,EAAE,yBAAyB,GAAG,OAAO,CAAC,qBAAqB,CAAC;IAqFvE,MAAM,CAAC,KAAK,EAAE,0BAA0B,GAAG,OAAO,CAAC,qBAAqB,CAAC;IAgDzE,IAAI,CAAC,KAAK,EAAE,wBAAwB,GAAG,OAAO,CAAC,qBAAqB,CAAC;IAyCrE,OAAO,CAAC,MAAM,EAAE;QAAE,SAAS,EAAE,MAAM,CAAC;QAAC,EAAE,EAAE,MAAM,CAAA;KAAE,GAAG,OAAO,CAAC,qBAAqB,GAAG,IAAI,CAAC;IAQzF,IAAI,CAAC,KAAK,EAAE,yBAAyB,GAAG,OAAO,CAAC,0BAA0B,CAAC;IAwDjF,OAAO,CAAC,yBAAyB;CAOlC"}

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@sixb/sqlite",
-  "version": "0.1.0",
+  "version": "0.1.1",
   "description": "SQLite storage provider for Sixb",
   "keywords": [
     "sixb",
@@ -35,10 +35,11 @@
     "test": "bun test",
     "prepack": "bun run build"
   },
-  "dependencies": {
-    "@sixb/core": "0.1.0"
+  "peerDependencies": {
+    "@sixb/core": "0.1.1"
   },
   "devDependencies": {
+    "@sixb/core": "0.1.1",
     "@types/bun": "latest",
     "typescript": "^5.7.0"
   },

package/src/migrations/002-workflow-run-output.sql

@@ -0,0 +1,27 @@
+ALTER TABLE workflow_runs ADD COLUMN output TEXT;
+
+UPDATE workflow_runs AS run
+SET output = CASE
+  WHEN EXISTS (
+    SELECT 1
+    FROM workflow_node_runs AS node
+    WHERE node.project_id = run.project_id
+      AND node.workflow_run_id = run.id
+      AND node.status = 'succeeded'
+      AND node.node_type <> 'action'
+  ) THEN COALESCE(
+    (
+      SELECT node.output
+      FROM workflow_node_runs AS node
+      WHERE node.project_id = run.project_id
+        AND node.workflow_run_id = run.id
+        AND node.status = 'succeeded'
+        AND node.node_type <> 'action'
+      ORDER BY node.node_index DESC, node.id DESC
+      LIMIT 1
+    ),
+    '{}'
+  )
+  ELSE run.input
+END
+WHERE run.status = 'succeeded';

package/src/migrations/003-merge-sync-runs.sql

@@ -0,0 +1,71 @@
+DROP INDEX idx_sync_runs_project_started;
+DROP INDEX idx_sync_runs_project_dataset_started;
+DROP INDEX idx_sync_runs_project_sync_started;
+DROP INDEX idx_sync_runs_project_status_started;
+
+ALTER TABLE sync_runs RENAME TO sync_runs_before_merge_mode;
+
+CREATE TABLE sync_runs (
+  project_id TEXT NOT NULL,
+  id TEXT NOT NULL,
+  sync_id TEXT NOT NULL,
+  dataset_id TEXT NOT NULL,
+  mode TEXT NOT NULL CHECK (mode IN ('snapshot', 'append', 'merge')),
+  status TEXT NOT NULL CHECK (status IN ('running', 'succeeded', 'failed', 'cancelled')),
+  started_at TEXT NOT NULL,
+  finished_at TEXT,
+  rows_read INTEGER CHECK (rows_read IS NULL OR rows_read >= 0),
+  output_version_id TEXT,
+  expected_latest_version_id TEXT,
+  commit_message TEXT,
+  error_name TEXT,
+  error_message TEXT,
+  checkpoint TEXT,
+  PRIMARY KEY (project_id, id)
+);
+
+INSERT INTO sync_runs (
+  project_id,
+  id,
+  sync_id,
+  dataset_id,
+  mode,
+  status,
+  started_at,
+  finished_at,
+  rows_read,
+  output_version_id,
+  expected_latest_version_id,
+  commit_message,
+  error_name,
+  error_message,
+  checkpoint
+)
+SELECT
+  project_id,
+  id,
+  sync_id,
+  dataset_id,
+  mode,
+  status,
+  started_at,
+  finished_at,
+  rows_read,
+  output_version_id,
+  expected_latest_version_id,
+  commit_message,
+  error_name,
+  error_message,
+  checkpoint
+FROM sync_runs_before_merge_mode;
+
+DROP TABLE sync_runs_before_merge_mode;
+
+CREATE INDEX idx_sync_runs_project_started
+  ON sync_runs(project_id, started_at DESC);
+CREATE INDEX idx_sync_runs_project_dataset_started
+  ON sync_runs(project_id, dataset_id, started_at DESC);
+CREATE INDEX idx_sync_runs_project_sync_started
+  ON sync_runs(project_id, sync_id, started_at DESC);
+CREATE INDEX idx_sync_runs_project_status_started
+  ON sync_runs(project_id, status, started_at DESC);

package/src/migrations.ts

@@ -17,6 +17,8 @@ import {
   step,
 } from "@sixb/core/storage"
 import initialSchemaSql from "./migrations/001-initial-schema.sql" with { type: "text" }
+import workflowRunOutputSql from "./migrations/002-workflow-run-output.sql" with { type: "text" }
+import mergeSyncRunsSql from "./migrations/003-merge-sync-runs.sql" with { type: "text" }
 
 const MIGRATIONS_TABLE_SQL = `
   CREATE TABLE IF NOT EXISTS sixb_migrations (
@@ -36,7 +38,11 @@ export const SQLITE_STORAGE_FILE = "storage.sqlite"
 
 export const sqliteStorageMigrations = defineMigrations({
   adapterId: SQLITE_STORAGE_ADAPTER_ID,
-  steps: [sqliteSql("001-initial-schema", initialSchemaSql)],
+  steps: [
+    sqliteSql("001-initial-schema", initialSchemaSql),
+    sqliteSql("002-workflow-run-output", workflowRunOutputSql),
+    sqliteSql("003-merge-sync-runs", mergeSyncRunsSql),
+  ],
 })
 
 export function sqliteStoragePath(basePath: string): string {

package/src/ontology-storage/materialization-state.ts

@@ -142,33 +142,44 @@ export class SqliteMaterializationStateReader {
         json_extract(value, '$.primaryId') AS primary_id
       FROM json_each(?)
     `
+    // Keep the JSON request set on the outer side of each lookup. SQLite cannot estimate the
+    // cardinality of json_each() and otherwise scans every project row once per requested key.
+    // CROSS JOIN deliberately fixes the loop order so the existing composite indexes are used.
     const effectiveRows = this.db
       .query(
         `WITH requested AS (${requestedObjects})
-         SELECT objects.* FROM objects
-         JOIN requested USING (object_type_id, primary_id)
-         WHERE objects.project_id = ?`
+         SELECT objects.* FROM requested
+         CROSS JOIN objects
+           ON objects.project_id = ?
+          AND objects.object_type_id = requested.object_type_id
+          AND objects.primary_id = requested.primary_id`
       )
       .all(requested, this.projectId) as EffectiveObjectRow[]
     const sourceRows = this.db
       .query(
         `WITH requested AS (${requestedObjects})
-         SELECT rows.* FROM ontology_source_rows AS rows
-         JOIN requested USING (object_type_id, primary_id)
+         SELECT rows.* FROM requested
+         CROSS JOIN ontology_source_rows AS rows
+           ON rows.project_id = ?
+          AND rows.entity_kind = 'object'
+          AND rows.object_type_id = requested.object_type_id
+          AND rows.primary_id = requested.primary_id
          JOIN ontology_sources AS sources
            ON sources.project_id = rows.project_id
           AND sources.source_id = rows.source_id
           AND sources.materialization_id = rows.materialization_id
-         WHERE rows.project_id = ? AND rows.entity_kind = 'object'
-           AND sources.status = 'active'`
+         WHERE sources.status = 'active'`
       )
       .all(requested, this.projectId) as SqliteOntologySourceAssertionRow[]
     const overrideRows = this.db
       .query(
         `WITH requested AS (${requestedObjects})
-         SELECT overrides.* FROM ontology_overrides AS overrides
-         JOIN requested USING (object_type_id, primary_id)
-         WHERE overrides.project_id = ? AND overrides.entity_kind = 'object'`
+         SELECT overrides.* FROM requested
+         CROSS JOIN ontology_overrides AS overrides
+           ON overrides.project_id = ?
+          AND overrides.entity_kind = 'object'
+          AND overrides.object_type_id = requested.object_type_id
+          AND overrides.primary_id = requested.primary_id`
       )
       .all(requested, this.projectId) as ObjectOverrideRow[]
     const telemetryRows = this.db
@@ -180,11 +191,11 @@ export class SqliteMaterializationStateReader {
                  timeseries.property_id
                ORDER BY timeseries.at DESC
              ) AS rank
-           FROM timeseries
-           JOIN requested
-             ON requested.object_type_id = timeseries.object_type_id
-            AND requested.primary_id = timeseries.object_id
-           WHERE timeseries.project_id = ?
+           FROM requested
+           CROSS JOIN timeseries
+             ON timeseries.project_id = ?
+            AND timeseries.object_type_id = requested.object_type_id
+            AND timeseries.object_id = requested.primary_id
          )
          SELECT * FROM ranked WHERE rank = 1`
       )
@@ -261,34 +272,47 @@ export class SqliteMaterializationStateReader {
     const effectiveRows = this.db
       .query(
         `WITH requested AS (${effectiveRequest})
-         SELECT links.* FROM links
-         JOIN requested USING (source_type_id, source_id, link_id, target_type_id, target_id)
-         WHERE links.project_id = ?`
+         SELECT links.* FROM requested
+         CROSS JOIN links
+           ON links.project_id = ?
+          AND links.source_type_id = requested.source_type_id
+          AND links.source_id = requested.source_id
+          AND links.link_id = requested.link_id
+          AND links.target_type_id = requested.target_type_id
+          AND links.target_id = requested.target_id`
       )
       .all(requested, this.projectId) as EffectiveLinkRow[]
     const sourceRows = this.db
       .query(
         `WITH requested AS (${sourceRequest})
-         SELECT rows.* FROM ontology_source_rows AS rows
-         JOIN requested USING (
-           source_type_id, source_primary_id, link_id, target_type_id, target_primary_id
-         )
+         SELECT rows.* FROM requested
+         CROSS JOIN ontology_source_rows AS rows
+           ON rows.project_id = ?
+          AND rows.entity_kind = 'link'
+          AND rows.source_type_id = requested.source_type_id
+          AND rows.source_primary_id = requested.source_primary_id
+          AND rows.link_id = requested.link_id
+          AND rows.target_type_id = requested.target_type_id
+          AND rows.target_primary_id = requested.target_primary_id
          JOIN ontology_sources AS sources
            ON sources.project_id = rows.project_id
           AND sources.source_id = rows.source_id
           AND sources.materialization_id = rows.materialization_id
-         WHERE rows.project_id = ? AND rows.entity_kind = 'link'
-           AND sources.status = 'active'`
+         WHERE sources.status = 'active'`
       )
       .all(requested, this.projectId) as SqliteOntologySourceAssertionRow[]
     const overrideRows = this.db
       .query(
         `WITH requested AS (${sourceRequest})
-         SELECT overrides.* FROM ontology_overrides AS overrides
-         JOIN requested USING (
-           source_type_id, source_primary_id, link_id, target_type_id, target_primary_id
-         )
-         WHERE overrides.project_id = ? AND overrides.entity_kind = 'link'`
+         SELECT overrides.* FROM requested
+         CROSS JOIN ontology_overrides AS overrides
+           ON overrides.project_id = ?
+          AND overrides.entity_kind = 'link'
+          AND overrides.source_type_id = requested.source_type_id
+          AND overrides.source_primary_id = requested.source_primary_id
+          AND overrides.link_id = requested.link_id
+          AND overrides.target_type_id = requested.target_type_id
+          AND overrides.target_primary_id = requested.target_primary_id`
       )
       .all(requested, this.projectId) as LinkOverrideRow[]
     const effective = new Map(
@@ -337,9 +361,13 @@ export class SqliteMaterializationStateReader {
              json_extract(value, '$.at') AS at
            FROM json_each(?)
          )
-         SELECT timeseries.* FROM timeseries
-         JOIN requested USING (object_type_id, object_id, property_id, at)
-         WHERE timeseries.project_id = ?`
+         SELECT timeseries.* FROM requested
+         CROSS JOIN timeseries
+           ON timeseries.project_id = ?
+          AND timeseries.object_type_id = requested.object_type_id
+          AND timeseries.object_id = requested.object_id
+          AND timeseries.property_id = requested.property_id
+          AND timeseries.at = requested.at`
       )
       .all(requested, this.projectId) as TelemetryRow[]
     const found = new Map(
@@ -382,9 +410,12 @@ export class SqliteMaterializationStateReader {
             FROM json_each(?)
           )
           SELECT requested.scope_sort_key, links.*
-          FROM links
-          JOIN requested USING (source_type_id, source_id, link_id)
-          WHERE links.project_id = ?
+          FROM requested
+          CROSS JOIN links
+            ON links.project_id = ?
+           AND links.source_type_id = requested.source_type_id
+           AND links.source_id = requested.source_id
+           AND links.link_id = requested.link_id
           ORDER BY requested.scope_sort_key, ${linkSortExpression("links")}
         `
       )
@@ -610,22 +641,30 @@ export class SqliteMaterializationStateReader {
     if (materializationIds.length === 0 || refs.length === 0) {
       return { owned: new Set(), byMaterialization: new Map() }
     }
-    const requestedKeys = canonicalJson(refs.map((ref) => projectionEntityKey(ref)))
+    const requestedEntities = canonicalJson(
+      refs.map((ref) => ({ entityKind: ref.kind, entityKey: projectionEntityKey(ref) }))
+    )
     const requestedMaterializations = canonicalJson([...new Set(materializationIds)])
     const rows = this.db
       .query(
         `WITH requested_entities AS (
-           SELECT value AS entity_key FROM json_each(?)
+           SELECT DISTINCT json_extract(value, '$.entityKind') AS entity_kind,
+             json_extract(value, '$.entityKey') AS entity_key
+           FROM json_each(?)
          ), requested_materializations AS (
            SELECT value AS materialization_id FROM json_each(?)
          )
-         SELECT rows.* FROM ontology_source_rows AS rows
-         JOIN requested_entities USING (entity_key)
-         JOIN requested_materializations USING (materialization_id)
-         WHERE rows.project_id = ? AND rows.source_id = ?`
+         SELECT rows.* FROM requested_materializations
+         CROSS JOIN requested_entities
+         CROSS JOIN ontology_source_rows AS rows
+           ON rows.project_id = ?
+          AND rows.source_id = ?
+          AND rows.materialization_id = requested_materializations.materialization_id
+          AND rows.entity_kind = requested_entities.entity_kind
+          AND rows.entity_key = requested_entities.entity_key`
       )
       .all(
-        requestedKeys,
+        requestedEntities,
         requestedMaterializations,
         this.projectId,
         sourceId

package/src/sync-run-storage.ts

@@ -115,9 +115,9 @@ export class SqliteSyncRunStorage implements SyncRunStorage {
             `[SixbSqlite] Sync run '${input.id}' output dataset '${input.output.datasetId}' does not match '${existing.dataset_id}'.`
           )
         }
-        if (!input.output && (existing.mode !== "append" || input.rowsRead !== 0)) {
+        if (!input.output && input.rowsRead !== 0 && existing.mode !== "merge") {
           throw new SyncRunError(
-            `[SixbSqlite] Sync run '${input.id}' may omit its output only for an empty append.`
+            `[SixbSqlite] Sync run '${input.id}' may omit its output with rows read only for an initial merge no-op.`
           )
         }
       }

package/src/workflow-run-storage.ts

@@ -290,14 +290,17 @@ export class SqliteWorkflowRunStorage implements WorkflowRunStorage {
           SET
             status = ?,
             finished_at = ?,
-            error = ?
-            , execution_token = NULL, execution_queue_lease_expires_at = NULL
+            output = ?,
+            error = ?,
+            execution_token = NULL,
+            execution_queue_lease_expires_at = NULL
           WHERE project_id = ? AND id = ?
         `
         )
         .run(
           input.status,
           (input.finishedAt ?? new Date()).toISOString(),
+          input.status === "succeeded" ? serializeRecord(input.output) : null,
           input.status === "succeeded" ? null : (input.error ?? null),
           input.projectId,
           input.id
@@ -974,6 +977,7 @@ function rowToWorkflowRunRecord(row: WorkflowRunDatabaseRow): WorkflowRunRecord
     workflowId: row.workflow_id,
     status: row.status,
     input: parseRecord(row.input),
+    output: row.output ? parseRecord(row.output) : undefined,
     queuedAt: row.queued_at ? new Date(row.queued_at) : undefined,
     startedAt: new Date(row.started_at),
     finishedAt: row.finished_at ? new Date(row.finished_at) : undefined,
@@ -1039,6 +1043,7 @@ interface WorkflowRunDatabaseRow {
   workflow_id: string
   status: WorkflowRunRecord["status"]
   input: string
+  output: string | null
   queued_at: string | null
   started_at: string
   finished_at: string | null