@shapeshift-labs/frontier-swarm-codex 0.5.88 → 0.5.89

package/README.md

@@ -335,11 +335,13 @@ Each run writes event streams under `streams/`, a `coordinator-dashboard.json` s
 
 It also writes `merge-index.json`, `queue-overlay.json`, `strategy-tournament.json`, `strategy-history.json`, `tournament-adaptive-feedback.json`, `evidence-index.json`, `merge-admission.json`, `coordinator-query.json`, and `compact-dashboard.json` so coordinator dashboards can show changed paths, tests, semantic selected/eligible/imported/candidate counts, semantic dependency relations, semantic regions, lineage moves/renames/deletes, semantic edit-script portable/conflict/stale/admission counts, semantic edit admission decisions, universal AST layer quality, proof obligation status, quality warnings, source citations, risk, ready-to-port hunks, stale patches, duplicate surfaces, semantic import quality, evidence scores, pid liveness, conflicts, derived queue status, strategy payoff standings, tournament history, adaptive feedback, and ready merge pressure without scraping every worker directory. `coordinator-query.json`, `compact-dashboard.json`, and collected `evidence.json` expose `semanticEditAdmission` directly with status, clean eligibility, auto-merge candidacy, and reasons. Use `frontier-swarm query --collection <dir> --symbol computeThing`, `--lineage`, `--semantic-edit-status conflict|portable|stale`, `--semantic-edit-admission auto-merge-candidate|needs-port|conflict|stale`, or `--readiness ready-to-port|ready-to-apply|stale|discovery-only|blocked|evidence-only` for compact coordinator views. Stale checks distinguish patches that fail only because the coordinator worktree is dirty from patches whose base hashes no longer match HEAD. Copied/no-index workspace patches with source-side absolute paths are normalized back to repo-relative paths when possible; patches without comparable base hashes are treated as `needs-human-port`, not stale. The optional `--branch-prefix` adds suggested tiny patch branch names to each collected bundle so accepted slices can become one small branch/commit per surface, evidence path, and queue status overlay.
 
+Collection is also the archive boundary for large swarm runs. `collect` writes `artifact-store/artifacts.jsonl`, `artifact-store/artifact-index.sqlite` when the runtime provides `node:sqlite`, SQL export text, and content-addressed blobs under `artifact-store/blobs/`. Text-heavy artifacts such as JSON, JSONL, logs, patches, Markdown, and text files are compressed with zstd when available and gzip otherwise, while metadata records keep job id, kind, path, hash, compression, tags, and semantic summaries queryable. `frontier-swarm query` can read the SQLite index directly, so archived collections remain searchable even after JSONL has been removed. After reviewing the dry run, use `frontier-swarm cleanup --run <run-dir> --compact-artifacts --write` to delete run-side artifact source files and disposable worker workspaces that already have a `collected-and-indexed.json` marker and preserved blobs. Pass `--collection <dir>` when `collect --outDir` wrote the archive outside the default run directory. Cleanup keeps failed or active work by default and reports exactly what would be deleted unless `--write` is passed.
+
 `frontier-swarm tournament query --collection <collection-dir>` reads `strategy-tournament.json` and emits filtered JSON views. When the collection also has `compact-dashboard.json` or `coordinator-query.json`, the query result includes a `semanticImport` block with aggregate quality plus per-job quality summaries. Use `--view summary|standings|matches|full`, `--strategy`, `--game`, `--outcome`, `--tag`, `--min-score`, `--max-score`, and `--limit` to narrow review. `frontier-swarm tournament compare --baseline <file> --current <file>` compares two tournaments, `frontier-swarm tournament history --tournament <file>` folds one or more tournaments into cross-run standings, and `frontier-swarm tournament feedback --collection <dir>` emits adaptive scheduler observations. Pass that feedback into a later run with `--adaptive --adaptive-feedback <tournament-adaptive-feedback.json>`.
 
 `frontier-swarm apply --collection <collection-dir>` reviews the `ready-to-apply/` bucket and writes `apply-ledger.json`. It defaults to `--dry-run`, which runs `git apply --check` without mutating the checkout. Non-dry-run apply refuses a dirty worktree unless `--allow-dirty` is passed, and can optionally create small branches with `--branch-prefix` and commits with `--commit`.
 
-`frontier-swarm score --collection <collection-dir>` applies each collected bundle in a throwaway workspace and writes `patch-score.json`. Use `--focused-command` for the gate that proves the slice and `--global-command` with `--global-glob` for shared-code smoke/type/build gates. Scores are classified as `accepted-clean`, `accepted-needs-port`, `conflict`, `test-fail`, `stale`, or `evidence-only`, so the coordinator can review the best patch candidates before manually reading every bundle. When semantic import sidecars are present, the score entries include `semanticEvidence` with source-map mapping counts, semantic symbols, dependency relation counts/predicates, ownership regions, patch hints, lineage counts, semantic edit-script admission, losses, readiness, proof obligation counts, failed/stale proof status, paradigm/lowering record counts, and an advisory score adjustment. Missing or empty semantic evidence downgrades otherwise clean source patches to `accepted-needs-port` instead of treating textual apply success as merge readiness; blocked or ambiguous lineage evidence, stale semantic edit anchors, or conflicting semantic edit scripts also prevent an `accepted-clean` classification. If the collection has an `apply-ledger/apply-ledger.json`, scoring also emits `calibration` with landed job ids, predicted clean job ids, semantic auto-merge-candidate job ids, semantic candidate precision, false positives, and false negatives so tournament/adaptive scheduling can learn from actual merges.
+`frontier-swarm score --collection <collection-dir>` applies each collected bundle in a throwaway workspace and writes `patch-score.json`. Use `--workspace-include` / `--workspace-exclude` to keep score workspaces small, `--focused-command` for the gate that proves the slice, and `--global-command` with `--global-glob` for shared-code smoke/type/build gates. Scores are classified as `accepted-clean`, `accepted-needs-port`, `conflict`, `test-fail`, `stale`, or `evidence-only`, so the coordinator can review the best patch candidates before manually reading every bundle. When semantic import sidecars are present, the score entries include `semanticEvidence` with source-map mapping counts, semantic symbols, dependency relation counts/predicates, ownership regions, patch hints, lineage counts, semantic edit-script admission, losses, readiness, proof obligation counts, failed/stale proof status, paradigm/lowering record counts, and an advisory score adjustment. Missing or empty semantic evidence downgrades otherwise clean source patches to `accepted-needs-port` instead of treating textual apply success as merge readiness; blocked or ambiguous lineage evidence, stale semantic edit anchors, or conflicting semantic edit scripts also prevent an `accepted-clean` classification. If the collection has an `apply-ledger/apply-ledger.json`, scoring also emits `calibration` with landed job ids, predicted clean job ids, semantic auto-merge-candidate job ids, semantic candidate precision, false positives, and false negatives so tournament/adaptive scheduling can learn from actual merges.
 
 ## Surface
 

package/dist/artifact-compression.d.ts

@@ -0,0 +1,10 @@
+export interface FrontierCodexCompressedArtifact {
+    bytes: Buffer;
+    compression: 'zstd' | 'gzip' | 'none';
+    extension: string;
+}
+export declare function compressArtifactBytes(bytes: Buffer, options: {
+    enabled: boolean;
+    compressible: boolean;
+}): Promise<FrontierCodexCompressedArtifact>;
+//# sourceMappingURL=artifact-compression.d.ts.map

package/dist/artifact-compression.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"artifact-compression.d.ts","sourceRoot":"","sources":["../src/artifact-compression.ts"],"names":[],"mappings":"AAOA,MAAM,WAAW,+BAA+B;IAC9C,KAAK,EAAE,MAAM,CAAC;IACd,WAAW,EAAE,MAAM,GAAG,MAAM,GAAG,MAAM,CAAC;IACtC,SAAS,EAAE,MAAM,CAAC;CACnB;AAED,wBAAsB,qBAAqB,CACzC,KAAK,EAAE,MAAM,EACb,OAAO,EAAE;IAAE,OAAO,EAAE,OAAO,CAAC;IAAC,YAAY,EAAE,OAAO,CAAA;CAAE,GACnD,OAAO,CAAC,+BAA+B,CAAC,CAO1C"}

package/dist/artifact-compression.js

@@ -0,0 +1,40 @@
+import { spawn } from 'node:child_process';
+import { gzip } from 'node:zlib';
+import { promisify } from 'node:util';
+const gzipAsync = promisify(gzip);
+let zstdUsable;
+export async function compressArtifactBytes(bytes, options) {
+    if (!options.enabled || !options.compressible) {
+        return { bytes, compression: 'none', extension: '' };
+    }
+    const zstd = await zstdCompress(bytes).catch(() => undefined);
+    if (zstd)
+        return { bytes: zstd, compression: 'zstd', extension: '.zst' };
+    return { bytes: await gzipAsync(bytes), compression: 'gzip', extension: '.gz' };
+}
+async function zstdCompress(bytes) {
+    if (zstdUsable === false)
+        return undefined;
+    return new Promise((resolve, reject) => {
+        const child = spawn('zstd', ['-q', '-T0', '-19', '-c'], { stdio: ['pipe', 'pipe', 'ignore'] });
+        const chunks = [];
+        child.stdout.on('data', (chunk) => chunks.push(chunk));
+        child.on('error', (error) => {
+            zstdUsable = false;
+            reject(error);
+        });
+        child.on('close', (status) => {
+            if (status === 0) {
+                zstdUsable = true;
+                resolve(Buffer.concat(chunks));
+            }
+            else {
+                if (zstdUsable === undefined)
+                    zstdUsable = false;
+                resolve(undefined);
+            }
+        });
+        child.stdin.end(bytes);
+    });
+}
+//# sourceMappingURL=artifact-compression.js.map

package/dist/artifact-compression.js.map

@@ -0,0 +1 @@
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package/dist/artifact-sqlite.d.ts

@@ -0,0 +1,4 @@
+import type { FrontierCodexArtifactRecord } from './index.js';
+export declare function writeSqliteArtifactIndex(file: string, records: readonly FrontierCodexArtifactRecord[]): Promise<boolean>;
+export declare function readSqliteArtifactIndex(file: string): Promise<FrontierCodexArtifactRecord[]>;
+//# sourceMappingURL=artifact-sqlite.d.ts.map

package/dist/artifact-sqlite.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"artifact-sqlite.d.ts","sourceRoot":"","sources":["../src/artifact-sqlite.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EAAE,2BAA2B,EAAE,MAAM,YAAY,CAAC;AAI9D,wBAAsB,wBAAwB,CAC5C,IAAI,EAAE,MAAM,EACZ,OAAO,EAAE,SAAS,2BAA2B,EAAE,GAC9C,OAAO,CAAC,OAAO,CAAC,CAkClB;AAED,wBAAsB,uBAAuB,CAAC,IAAI,EAAE,MAAM,GAAG,OAAO,CAAC,2BAA2B,EAAE,CAAC,CAUlG"}

package/dist/artifact-sqlite.js

@@ -0,0 +1,89 @@
+import fs from 'node:fs/promises';
+import { createRequire } from 'node:module';
+const require = createRequire(import.meta.url);
+export async function writeSqliteArtifactIndex(file, records) {
+    const sqlite = loadSqlite();
+    if (!sqlite?.DatabaseSync)
+        return false;
+    await fs.rm(file, { force: true });
+    const db = new sqlite.DatabaseSync(file);
+    db.exec([
+        'create table artifacts (',
+        'id text, run_dir text, collection_dir text, job_id text, bucket text, kind text, path text, relative_path text,',
+        'sha256 text, blob_path text, compression text, bytes integer, compressed_bytes integer, mtime_ms real,',
+        'tags text, metadata_json text)'
+    ].join(' '));
+    const stmt = db.prepare('insert into artifacts values (?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?)');
+    for (const record of records) {
+        stmt.run(record.id, record.runDir, record.collectionDir, record.jobId ?? null, record.bucket ?? null, record.kind, record.path, record.relativePath, record.sha256, record.blobPath, record.compression, record.bytes, record.compressedBytes ?? null, record.mtimeMs, record.tags.join(','), JSON.stringify(record.metadata));
+    }
+    db.close();
+    return true;
+}
+export async function readSqliteArtifactIndex(file) {
+    const sqlite = loadSqlite();
+    if (!sqlite?.DatabaseSync)
+        return [];
+    const db = new sqlite.DatabaseSync(file, { readOnly: true });
+    try {
+        const rows = readSqliteRows(db);
+        return rows.map(rowToRecord);
+    }
+    finally {
+        db.close();
+    }
+}
+function readSqliteRows(db) {
+    try {
+        return db.prepare([
+            'select id, run_dir, collection_dir, job_id, bucket, kind, path, relative_path, sha256,',
+            'blob_path, compression, bytes, compressed_bytes, mtime_ms, tags, metadata_json from artifacts'
+        ].join(' ')).all();
+    }
+    catch {
+        return db.prepare([
+            'select id, job_id, bucket, kind, path, relative_path, sha256,',
+            'blob_path, compression, bytes, compressed_bytes, tags, metadata_json from artifacts'
+        ].join(' ')).all();
+    }
+}
+function rowToRecord(row) {
+    return {
+        id: row.id,
+        ...(row.job_id ? { jobId: row.job_id } : {}),
+        ...(row.bucket ? { bucket: row.bucket } : {}),
+        kind: row.kind,
+        path: row.path,
+        relativePath: row.relative_path,
+        sha256: row.sha256,
+        blobPath: row.blob_path,
+        compression: row.compression,
+        bytes: Number(row.bytes),
+        ...(row.compressed_bytes === null ? {} : { compressedBytes: Number(row.compressed_bytes) }),
+        mtimeMs: Number(row.mtime_ms ?? 0),
+        tags: row.tags ? row.tags.split(',').filter(Boolean) : [],
+        metadata: parseMetadata(row.metadata_json),
+        runDir: row.run_dir ?? '',
+        collectionDir: row.collection_dir ?? ''
+    };
+}
+function parseMetadata(value) {
+    if (!value)
+        return {};
+    try {
+        const parsed = JSON.parse(value);
+        return parsed && typeof parsed === 'object' && !Array.isArray(parsed) ? parsed : {};
+    }
+    catch {
+        return {};
+    }
+}
+function loadSqlite() {
+    try {
+        return require('node:sqlite');
+    }
+    catch {
+        return undefined;
+    }
+}
+//# sourceMappingURL=artifact-sqlite.js.map

package/dist/artifact-sqlite.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"artifact-sqlite.js","sourceRoot":"","sources":["../src/artifact-sqlite.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,MAAM,kBAAkB,CAAC;AAClC,OAAO,EAAE,aAAa,EAAE,MAAM,aAAa,CAAC;AAG5C,MAAM,OAAO,GAAG,aAAa,CAAC,MAAM,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;AAE/C,MAAM,CAAC,KAAK,UAAU,wBAAwB,CAC5C,IAAY,EACZ,OAA+C;IAE/C,MAAM,MAAM,GAAG,UAAU,EAAE,CAAC;IAC5B,IAAI,CAAC,MAAM,EAAE,YAAY;QAAE,OAAO,KAAK,CAAC;IACxC,MAAM,EAAE,CAAC,EAAE,CAAC,IAAI,EAAE,EAAE,KAAK,EAAE,IAAI,EAAE,CAAC,CAAC;IACnC,MAAM,EAAE,GAAG,IAAI,MAAM,CAAC,YAAY,CAAC,IAAI,CAAC,CAAC;IACzC,EAAE,CAAC,IAAI,CAAC;QACN,0BAA0B;QAC1B,iHAAiH;QACjH,wGAAwG;QACxG,gCAAgC;KACjC,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC;IACb,MAAM,IAAI,GAAG,EAAE,CAAC,OAAO,CAAC,+EAA+E,CAAC,CAAC;IACzG,KAAK,MAAM,MAAM,IAAI,OAAO,EAAE,CAAC;QAC7B,IAAI,CAAC,GAAG,CACN,MAAM,CAAC,EAAE,EACT,MAAM,CAAC,MAAM,EACb,MAAM,CAAC,aAAa,EACpB,MAAM,CAAC,KAAK,IAAI,IAAI,EACpB,MAAM,CAAC,MAAM,IAAI,IAAI,EACrB,MAAM,CAAC,IAAI,EACX,MAAM,CAAC,IAAI,EACX,MAAM,CAAC,YAAY,EACnB,MAAM,CAAC,MAAM,EACb,MAAM,CAAC,QAAQ,EACf,MAAM,CAAC,WAAW,EAClB,MAAM,CAAC,KAAK,EACZ,MAAM,CAAC,eAAe,IAAI,IAAI,EAC9B,MAAM,CAAC,OAAO,EACd,MAAM,CAAC,IAAI,CAAC,IAAI,CAAC,GAAG,CAAC,EACrB,IAAI,CAAC,SAAS,CAAC,MAAM,CAAC,QAAQ,CAAC,CAChC,CAAC;IACJ,CAAC;IACD,EAAE,CAAC,KAAK,EAAE,CAAC;IACX,OAAO,IAAI,CAAC;AACd,CAAC;AAED,MAAM,CAAC,KAAK,UAAU,uBAAuB,CAAC,IAAY;IACxD,MAAM,MAAM,GAAG,UAAU,EAAE,CAAC;IAC5B,IAAI,CAAC,MAAM,EAAE,YAAY;QAAE,OAAO,EAAE,CAAC;IACrC,MAAM,EAAE,GAAG,IAAI,MAAM,CAAC,YAAY,CAAC,IAAI,EAAE,EAAE,QAAQ,EAAE,IAAI,EAAE,CAAC,CAAC;IAC7D,IAAI,CAAC;QACH,MAAM,IAAI,GAAG,cAAc,CAAC,EAAE,CAAC,CAAC;QAChC,OAAO,IAAI,CAAC,GAAG,CAAC,WAAW,CAAC,CAAC;IAC/B,CAAC;YAAS,CAAC;QACT,EAAE,CAAC,KAAK,EAAE,CAAC;IACb,CAAC;AACH,CAAC;AAqBD,SAAS,cAAc,CAAC,EAAkB;IACxC,IAAI,CAAC;QACH,OAAO,EAAE,CAAC,OAAO,CAAC;YAChB,wFAAwF;YACxF,+FAA+F;SAChG,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC,GAAG,EAAyB,CAAC;IAC5C,CAAC;IAAC,MAAM,CAAC;QACP,OAAO,EAAE,CAAC,OAAO,CAAC;YAChB,+DAA+D;YAC/D,qFAAqF;SACtF,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC,GAAG,EAAyB,CAAC;IAC5C,CAAC;AACH,CAAC;AAED,SAAS,WAAW,CAAC,GAAsB;IACzC,OAAO;QACL,EAAE,EAAE,GAAG,CAAC,EAAE;QACV,GAAG,CAAC,GAAG,CAAC,MAAM,CAAC,CAAC,CAAC,EAAE,KAAK,EAAE,GAAG,CAAC,MAAM,EAAE,CAAC,CAAC,CAAC,EAAE,CAAC;QAC5C,GAAG,CAAC,GAAG,CAAC,MAAM,CAAC,CAAC,CAAC,EAAE,MAAM,EAAE,GAAG,CAAC,MAAM,EAAE,CAAC,CAAC,CAAC,EAAE,CAAC;QAC7C,IAAI,EAAE,GAAG,CAAC,IAAI;QACd,IAAI,EAAE,GAAG,CAAC,IAAI;QACd,YAAY,EAAE,GAAG,CAAC,aAAa;QAC/B,MAAM,EAAE,GAAG,CAAC,MAAM;QAClB,QAAQ,EAAE,GAAG,CAAC,SAAS;QACvB,WAAW,EAAE,GAAG,CAAC,WAAW;QAC5B,KAAK,EAAE,MAAM,CAAC,GAAG,CAAC,KAAK,CAAC;QACxB,GAAG,CAAC,GAAG,CAAC,gBAAgB,KAAK,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,EAAE,eAAe,EAAE,MAAM,CAAC,GAAG,CAAC,gBAAgB,CAAC,EAAE,CAAC;QAC3F,OAAO,EAAE,MAAM,CAAC,GAAG,CAAC,QAAQ,IAAI,CAAC,CAAC;QAClC,IAAI,EAAE,GAAG,CAAC,IAAI,CAAC,CAAC,CAAC,GAAG,CAAC,IAAI,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,MAAM,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,EAAE;QACzD,QAAQ,EAAE,aAAa,CAAC,GAAG,CAAC,aAAa,CAAC;QAC1C,MAAM,EAAE,GAAG,CAAC,OAAO,IAAI,EAAE;QACzB,aAAa,EAAE,GAAG,CAAC,cAAc,IAAI,EAAE;KACxC,CAAC;AACJ,CAAC;AAED,SAAS,aAAa,CAAC,KAAoB;IACzC,IAAI,CAAC,KAAK;QAAE,OAAO,EAAE,CAAC;IACtB,IAAI,CAAC;QACH,MAAM,MAAM,GAAG,IAAI,CAAC,KAAK,CAAC,KAAK,CAAC,CAAC;QACjC,OAAO,MAAM,IAAI,OAAO,MAAM,KAAK,QAAQ,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC,MAAiC,CAAC,CAAC,CAAC,EAAE,CAAC;IACjH,CAAC;IAAC,MAAM,CAAC;QACP,OAAO,EAAE,CAAC;IACZ,CAAC;AACH,CAAC;AAED,SAAS,UAAU;IACjB,IAAI,CAAC;QACH,OAAO,OAAO,CAAC,aAAa,CAA8F,CAAC;IAC7H,CAAC;IAAC,MAAM,CAAC;QACP,OAAO,SAAS,CAAC;IACnB,CAAC;AACH,CAAC"}

package/dist/artifact-store.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"artifact-store.d.ts","sourceRoot":"","sources":["../src/artifact-store.ts"],"names":[],"mappings":"AAWA,OAAO,KAAK,EAAE,2BAA2B,EAAE,gCAAgC,EAAE,0BAA0B,EAAE,MAAM,YAAY,CAAC;AAO5H,wBAAsB,wBAAwB,CAAC,KAAK,EAAE;IACpD,UAAU,EAAE,0BAA0B,CAAC;IACvC,QAAQ,CAAC,EAAE,OAAO,CAAC;IACnB,MAAM,CAAC,EAAE,OAAO,CAAC;IACjB,gBAAgB,CAAC,EAAE,MAAM,CAAC;CAC3B,GAAG,OAAO,CAAC,gCAAgC,CAAC,CAmD5C;AAED,wBAAsB,wBAAwB,CAAC,aAAa,EAAE,MAAM,GAAG,OAAO,CAAC,2BAA2B,EAAE,CAAC,CAI5G"}
+{"version":3,"file":"artifact-store.d.ts","sourceRoot":"","sources":["../src/artifact-store.ts"],"names":[],"mappings":"AAQA,OAAO,KAAK,EAAE,2BAA2B,EAAE,gCAAgC,EAAE,0BAA0B,EAAE,MAAM,YAAY,CAAC;AAO5H,wBAAsB,wBAAwB,CAAC,KAAK,EAAE;IACpD,UAAU,EAAE,0BAA0B,CAAC;IACvC,QAAQ,CAAC,EAAE,OAAO,CAAC;IACnB,MAAM,CAAC,EAAE,OAAO,CAAC;IACjB,gBAAgB,CAAC,EAAE,MAAM,CAAC;CAC3B,GAAG,OAAO,CAAC,gCAAgC,CAAC,CAoD5C;AAED,wBAAsB,wBAAwB,CAAC,aAAa,EAAE,MAAM,GAAG,OAAO,CAAC,2BAA2B,EAAE,CAAC,CAa5G"}

package/dist/artifact-store.js

@@ -1,13 +1,10 @@
 import { createHash } from 'node:crypto';
 import fs from 'node:fs/promises';
-import { createRequire } from 'node:module';
 import path from 'node:path';
-import { gzip } from 'node:zlib';
-import { promisify } from 'node:util';
 import { FRONTIER_SWARM_CODEX_ARTIFACT_STORE_KIND, FRONTIER_SWARM_CODEX_ARTIFACT_STORE_VERSION, FRONTIER_SWARM_CODEX_SEMANTIC_IMPORT_KIND } from './constants.js';
 import { isObject, pathExists, uniqueStrings } from './common.js';
-const gzipAsync = promisify(gzip);
-const require = createRequire(import.meta.url);
+import { compressArtifactBytes } from './artifact-compression.js';
+import { readSqliteArtifactIndex, writeSqliteArtifactIndex } from './artifact-sqlite.js';
 const COMPRESS_EXTENSIONS = new Set(['.json', '.jsonl', '.log', '.txt', '.patch', '.md']);
 export async function createCodexArtifactStore(input) {
     const generatedAt = Date.now();
@@ -30,12 +27,13 @@ export async function createCodexArtifactStore(input) {
     const sqlitePath = path.join(storeDir, 'artifact-index.sqlite');
     await fs.writeFile(jsonlPath, records.map((record) => JSON.stringify(record)).join('\n') + (records.length ? '\n' : ''));
     await fs.writeFile(sqlPath, renderArtifactSql(records));
-    const sqliteWritten = input.sqlite === false ? false : await writeSqliteIndex(sqlitePath, records).catch(() => false);
+    const sqliteWritten = input.sqlite === false ? false : await writeSqliteArtifactIndex(sqlitePath, records).catch(() => false);
     const summary = {
         artifactCount: records.length,
         totalBytes: records.reduce((sum, record) => sum + record.bytes, 0),
         compressedBytes: records.reduce((sum, record) => sum + (record.compressedBytes ?? record.bytes), 0),
         blobCount: new Set(records.map((record) => record.sha256)).size,
+        zstdCount: records.filter((record) => record.compression === 'zstd').length,
         gzipCount: records.filter((record) => record.compression === 'gzip').length,
         sqliteWritten
     };
@@ -63,6 +61,15 @@ export async function createCodexArtifactStore(input) {
     return result;
 }
 export async function readCodexArtifactRecords(collectionDir) {
+    const sqlitePath = path.join(collectionDir, 'artifact-store', 'artifact-index.sqlite');
+    const sqliteRecords = await readSqliteArtifactIndex(sqlitePath).catch(() => []);
+    if (sqliteRecords.length > 0) {
+        return sqliteRecords.map((record) => ({
+            ...record,
+            runDir: record.runDir || '',
+            collectionDir: record.collectionDir || collectionDir
+        }));
+    }
     const jsonlPath = path.join(collectionDir, 'artifact-store', 'artifacts.jsonl');
     const text = await fs.readFile(jsonlPath, 'utf8');
     return text.split(/\r?\n/).filter(Boolean).map((line) => JSON.parse(line));
@@ -100,12 +107,14 @@ async function createArtifactRecord(candidate, collection, options) {
     const bytes = await fs.readFile(candidate.file);
     const sha256 = createHash('sha256').update(bytes).digest('hex');
     const relativePath = path.relative(collection.outDir, candidate.file).replace(/\\/g, '/');
-    const compress = options.compress && COMPRESS_EXTENSIONS.has(path.extname(candidate.file).toLowerCase());
-    const blobBytes = compress ? await gzipAsync(bytes) : bytes;
-    const blobPath = path.join(options.blobDir, sha256.slice(0, 2), `${sha256}${compress ? '.gz' : ''}`);
+    const compressed = await compressArtifactBytes(bytes, {
+        enabled: options.compress,
+        compressible: COMPRESS_EXTENSIONS.has(path.extname(candidate.file).toLowerCase())
+    });
+    const blobPath = path.join(options.blobDir, sha256.slice(0, 2), `${sha256}${compressed.extension}`);
     await fs.mkdir(path.dirname(blobPath), { recursive: true });
     if (!await pathExists(blobPath))
-        await fs.writeFile(blobPath, blobBytes);
+        await fs.writeFile(blobPath, compressed.bytes);
     const metadata = await readArtifactMetadata(candidate.file);
     return {
         id: `artifact:${sha256}`,
@@ -119,8 +128,8 @@ async function createArtifactRecord(candidate, collection, options) {
         bytes: stat.size,
         sha256,
         blobPath,
-        compression: compress ? 'gzip' : 'none',
-        ...(compress ? { compressedBytes: blobBytes.byteLength } : {}),
+        compression: compressed.compression,
+        ...(compressed.compression !== 'none' ? { compressedBytes: compressed.bytes.byteLength } : {}),
         mtimeMs: stat.mtimeMs,
         tags: artifactTags(candidate, metadata),
         metadata
@@ -182,6 +191,8 @@ function artifactTags(candidate, metadata) {
 function renderArtifactSql(records) {
     const rows = records.map((record) => `insert into artifacts values (${[
         record.id,
+        record.runDir,
+        record.collectionDir,
         record.jobId ?? null,
         record.bucket ?? null,
         record.kind,
@@ -192,27 +203,19 @@ function renderArtifactSql(records) {
         record.compression,
         record.bytes,
         record.compressedBytes ?? null,
+        record.mtimeMs,
         record.tags.join(','),
         JSON.stringify(record.metadata)
     ].map(sqlValue).join(', ')});`);
     return [
-        'create table if not exists artifacts (id text, job_id text, bucket text, kind text, path text, relative_path text, sha256 text, blob_path text, compression text, bytes integer, compressed_bytes integer, tags text, metadata_json text);',
+        [
+            'create table if not exists artifacts (id text, run_dir text, collection_dir text, job_id text, bucket text,',
+            'kind text, path text, relative_path text, sha256 text, blob_path text, compression text, bytes integer,',
+            'compressed_bytes integer, mtime_ms real, tags text, metadata_json text);'
+        ].join(' '),
         ...rows
     ].join('\n') + '\n';
 }
-async function writeSqliteIndex(file, records) {
-    const sqlite = require('node:sqlite');
-    if (!sqlite.DatabaseSync)
-        return false;
-    await fs.rm(file, { force: true });
-    const db = new sqlite.DatabaseSync(file);
-    db.exec('create table artifacts (id text, job_id text, bucket text, kind text, path text, relative_path text, sha256 text, blob_path text, compression text, bytes integer, compressed_bytes integer, tags text, metadata_json text)');
-    const stmt = db.prepare('insert into artifacts values (?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?)');
-    for (const record of records)
-        stmt.run(record.id, record.jobId ?? null, record.bucket ?? null, record.kind, record.path, record.relativePath, record.sha256, record.blobPath, record.compression, record.bytes, record.compressedBytes ?? null, record.tags.join(','), JSON.stringify(record.metadata));
-    db.close();
-    return true;
-}
 function artifactKindForEvidencePath(file) {
     const name = path.basename(file).toLowerCase();
     if (name === 'semantic-imports.json')

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package/dist/cleanup.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"cleanup.d.ts","sourceRoot":"","sources":["../src/cleanup.ts"],"names":[],"mappings":"AAGA,OAAO,KAAK,EAAE,yBAAyB,EAAE,wBAAwB,EAAE,MAAM,YAAY,CAAC;AAItF,KAAK,QAAQ,GAAG,MAAM,GAAG,OAAO,GAAG,MAAM,EAAE,CAAC;AAC5C,KAAK,OAAO,GAAG,MAAM,CAAC,MAAM,EAAE,QAAQ,GAAG,SAAS,CAAC,GAAG;IAAE,CAAC,EAAE,MAAM,EAAE,CAAA;CAAE,CAAC;AAEtE,wBAAsB,sBAAsB,CAAC,KAAK,EAAE,yBAAyB,GAAG,OAAO,CAAC,wBAAwB,CAAC,CAwChH;AAED,wBAAsB,yBAAyB,CAAC,IAAI,EAAE,OAAO,GAAG,OAAO,CAAC,IAAI,CAAC,CAc5E"}
+{"version":3,"file":"cleanup.d.ts","sourceRoot":"","sources":["../src/cleanup.ts"],"names":[],"mappings":"AAGA,OAAO,KAAK,EAAE,yBAAyB,EAAE,wBAAwB,EAAE,MAAM,YAAY,CAAC;AAKtF,KAAK,QAAQ,GAAG,MAAM,GAAG,OAAO,GAAG,MAAM,EAAE,CAAC;AAC5C,KAAK,OAAO,GAAG,MAAM,CAAC,MAAM,EAAE,QAAQ,GAAG,SAAS,CAAC,GAAG;IAAE,CAAC,EAAE,MAAM,EAAE,CAAA;CAAE,CAAC;AAEtE,wBAAsB,sBAAsB,CAAC,KAAK,EAAE,yBAAyB,GAAG,OAAO,CAAC,wBAAwB,CAAC,CA+ChH;AAED,wBAAsB,yBAAyB,CAAC,IAAI,EAAE,OAAO,GAAG,OAAO,CAAC,IAAI,CAAC,CAgB5E"}

package/dist/cleanup.js

@@ -3,11 +3,12 @@ import path from 'node:path';
 import { FRONTIER_SWARM_CODEX_CLEANUP_PLAN_KIND, FRONTIER_SWARM_CODEX_CLEANUP_PLAN_VERSION } from './constants.js';
 import { findFilesByName, isObject, pathExists } from './common.js';
 import { readCodexPidProcesses } from './collect.js';
+import { readCodexArtifactRecords } from './artifact-store.js';
 export async function createCodexCleanupPlan(input) {
     const generatedAt = Date.now();
     const cwd = path.resolve(input.cwd ?? process.cwd());
     const runDir = path.resolve(cwd, input.run);
-    const collectionDir = await resolveCollectionDir(runDir);
+    const collectionDir = input.collection ? path.resolve(cwd, input.collection) : await resolveCollectionDir(runDir);
     const markerPath = collectionDir ? path.join(collectionDir, 'collected-and-indexed.json') : undefined;
     const indexed = !!markerPath && await pathExists(markerPath);
     const processes = await readCodexPidProcesses(path.join(runDir, 'pids.json')).catch(() => []);
@@ -17,7 +18,11 @@ export async function createCodexCleanupPlan(input) {
         ...(active && input.keepActive !== false ? ['active-pids-present'] : [])
     ];
     const failedJobIds = input.keepFailed === false ? new Set() : await readFailedJobIds(collectionDir);
-    const candidates = await workspaceCleanupCandidates(runDir, failedJobIds, generatedAt, input.maxAgeHours);
+    const workspaceCandidates = await workspaceCleanupCandidates(runDir, failedJobIds, generatedAt, input.maxAgeHours);
+    const artifactCandidates = input.pruneArtifacts
+        ? await artifactSourceCleanupCandidates(runDir, collectionDir, generatedAt, input.maxAgeHours)
+        : [];
+    const candidates = [...workspaceCandidates, ...artifactCandidates];
     let deletedCount = 0;
     if (input.dryRun === false && blockedReasons.length === 0) {
         for (const candidate of candidates) {
@@ -34,6 +39,7 @@ export async function createCodexCleanupPlan(input) {
         ok: blockedReasons.length === 0,
         dryRun: input.dryRun !== false,
         runDir,
+        ...(collectionDir ? { collectionDir } : {}),
         generatedAt,
         indexed,
         candidates,
@@ -41,7 +47,9 @@ export async function createCodexCleanupPlan(input) {
         summary: {
             candidateCount: candidates.length,
             deletedCount,
-            reclaimableBytes: candidates.reduce((sum, candidate) => sum + candidate.bytes, 0)
+            reclaimableBytes: candidates.reduce((sum, candidate) => sum + candidate.bytes, 0),
+            workspaceCount: workspaceCandidates.length,
+            artifactSourceCount: artifactCandidates.length
         }
     };
 }
@@ -52,9 +60,11 @@ export async function handleCodexCleanupCommand(args) {
     const result = await createCodexCleanupPlan({
         cwd: process.cwd(),
         run,
-        maxAgeHours: numberArg(args.maxAgeHours ?? args['max-age-hours'] ?? args.maxAge ?? args['max-age']),
+        collection: stringArg(args.collection),
+        maxAgeHours: ageHoursArg(args.maxAgeHours ?? args['max-age-hours'] ?? args.maxAge ?? args['max-age']),
         keepFailed: boolArg(args.keepFailed ?? args['keep-failed'], true),
         keepActive: boolArg(args.keepActive ?? args['keep-active'], true),
+        pruneArtifacts: boolArg(args.pruneArtifacts ?? args['prune-artifacts'] ?? args.compactArtifacts ?? args['compact-artifacts'], false),
         dryRun: !boolArg(args.write, false)
     });
     await writeMaybe(args, result);
@@ -79,6 +89,7 @@ async function workspaceCleanupCandidates(runDir, failedJobIds, now, maxAgeHours
         const jobId = path.basename(workspacePath);
         seen.add(workspacePath);
         out.push({
+            kind: 'workspace',
             path: workspacePath,
             reason: `${mode}-workspace-collected-and-indexed`,
             bytes: await directoryBytes(workspacePath),
@@ -88,6 +99,39 @@ async function workspaceCleanupCandidates(runDir, failedJobIds, now, maxAgeHours
     }
     return out.sort((left, right) => left.path.localeCompare(right.path));
 }
+async function artifactSourceCleanupCandidates(runDir, collectionDir, now, maxAgeHours) {
+    if (!collectionDir)
+        return [];
+    const records = await readCodexArtifactRecords(collectionDir).catch(() => []);
+    const out = [];
+    const seen = new Set();
+    for (const record of records) {
+        const file = path.resolve(record.path);
+        if (seen.has(file) || !isInside(runDir, file) || isInside(collectionDir, file))
+            continue;
+        if (!await pathExists(record.blobPath) || !await pathExists(file))
+            continue;
+        const stat = await fs.stat(file).catch(() => undefined);
+        if (!stat?.isFile())
+            continue;
+        if (maxAgeHours !== undefined && now - stat.mtimeMs < maxAgeHours * 3600_000)
+            continue;
+        seen.add(file);
+        out.push({
+            kind: 'artifact-source',
+            path: file,
+            reason: 'indexed-artifact-source-archived',
+            bytes: stat.size,
+            active: false,
+            failed: false
+        });
+    }
+    return out.sort((left, right) => left.path.localeCompare(right.path));
+}
+function isInside(root, file) {
+    const relative = path.relative(root, file).replace(/\\/g, '/');
+    return !!relative && relative !== '..' && !relative.startsWith('../') && !path.isAbsolute(relative);
+}
 async function readFailedJobIds(collectionDir) {
     if (!collectionDir)
         return new Set();
@@ -134,6 +178,16 @@ function numberArg(value) {
     const parsed = Number(value);
     return Number.isFinite(parsed) ? parsed : undefined;
 }
+function ageHoursArg(value) {
+    if (value === undefined)
+        return undefined;
+    const text = String(value).trim();
+    const match = /^(\d+(?:\.\d+)?)(h|hr|hrs|hour|hours)?$/i.exec(text);
+    if (!match)
+        return numberArg(value);
+    const parsed = Number(match[1]);
+    return Number.isFinite(parsed) ? parsed : undefined;
+}
 function boolArg(value, fallback) {
     if (value === undefined)
         return fallback;

package/dist/cleanup.js.map

@@ -1 +1 @@
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package/dist/cli-help.js

@@ -22,7 +22,7 @@ export function printHelp() {
         '  --approval never|on-request|on-failure|untrusted',
         '  --workspace current|copy|snapshot|git-worktree',
         '  --replace-workspace false|true',
-        '  --include <path> --exclude <path> --link <path>',
+        '  --include <path> --exclude <path> --workspace-include <path> --workspace-exclude <path> --link <path>',
         '  --semantic-import --semantic-import-include <glob> --semantic-import-exclude <glob>',
         '  --semantic-import-max-files <n> --semantic-import-max-bytes <n>',
         '  --semantic-import-expected',
@@ -37,7 +37,7 @@ export function printHelp() {
         '  --focused-command <cmd> --global-command <cmd>',
         '  --q <text> --symbol <name> --path <substring> --bucket <name> --semantic --lineage --readiness <view>',
         '  --semantic-edit-status conflict|portable|stale --semantic-edit-admission auto-merge-candidate|needs-port',
-        '  --max-age-hours <n> --keep-failed --keep-active --write',
+        '  --max-age-hours <n|24h> --keep-failed --keep-active --compact-artifacts --collection <dir> --write',
         '  --package-root <dir> --exclude-package <name> --write --replace',
         '  --resume-overlay <file> --include-failed=false --include-blocked=false',
         '',

package/dist/cli-help.js.map

@@ -1 +1 @@
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+{"version":3,"file":"cli-help.js","sourceRoot":"","sources":["../src/cli-help.ts"],"names":[],"mappings":"AAAA,MAAM,UAAU,SAAS;IACvB,OAAO,CAAC,GAAG,CAAC;QACV,oCAAoC;QACpC,EAAE;QACF,WAAW;QACX,4DAA4D;QAC5D,oDAAoD;QACpD,+DAA+D;QAC/D,+DAA+D;QAC/D,wCAAwC;QACxC,8EAA8E;QAC9E,sFAAsF;QACtF,mEAAmE;QACnE,6DAA6D;QAC7D,+EAA+E;QAC/E,sDAAsD;QACtD,4EAA4E;QAC5E,+CAA+C;QAC/C,EAAE;QACF,iBAAiB;QACjB,+CAA+C;QAC/C,oDAAoD;QACpD,kDAAkD;QAClD,kCAAkC;QAClC,yGAAyG;QACzG,uFAAuF;QACvF,mEAAmE;QACnE,8BAA8B;QAC9B,sFAAsF;QACtF,4DAA4D;QAC5D,uEAAuE;QACvE,2DAA2D;QAC3D,iEAAiE;QACjE,+DAA+D;QAC/D,wEAAwE;QACxE,wDAAwD;QACxD,kDAAkD;QAClD,yGAAyG;QACzG,4GAA4G;QAC5G,sGAAsG;QACtG,mEAAmE;QACnE,0EAA0E;QAC1E,EAAE;QACF,8EAA8E;QAC9E,4GAA4G;KAC7G,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC,CAAC;AAChB,CAAC"}

package/dist/cli.js

@@ -120,8 +120,8 @@ try {
             outDir: stringArg(args.outDir ?? args.out),
             bucket: bucketArg(args.bucket),
             jobIds: listArg(args.job ?? args.jobId ?? args['job-id']),
-            workspaceIncludes: listArg(args.include),
-            workspaceExcludes: listArg(args.exclude),
+            workspaceIncludes: listArg(args.workspaceInclude ?? args['workspace-include'] ?? args.include),
+            workspaceExcludes: listArg(args.workspaceExclude ?? args['workspace-exclude'] ?? args.exclude),
             focusedCommands: commandListArg(args.focusedCommand ?? args['focused-command']),
             globalCommands: commandListArg(args.globalCommand ?? args['global-command']),
             globalGlobs: listArg(args.globalGlob ?? args['global-glob']),

package/dist/cli.js.map

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package/dist/query.js

@@ -72,8 +72,12 @@ async function resolveCollectionDir(input) {
         input.run
     ].filter((entry) => !!entry).map((entry) => path.resolve(cwd, entry));
     for (const candidate of candidates) {
-        if (await pathExists(path.join(candidate, 'coordinator-query.json')) || await pathExists(path.join(candidate, 'artifact-store', 'artifacts.jsonl')))
+        if (await pathExists(path.join(candidate, 'coordinator-query.json')) ||
+            await pathExists(path.join(candidate, 'artifact-store', 'artifacts.jsonl')) ||
+            await pathExists(path.join(candidate, 'artifact-store', 'artifact-index.sqlite')) ||
+            await pathExists(path.join(candidate, 'collected-and-indexed.json'))) {
             return candidate;
+        }
     }
     throw new Error('query requires --collection <dir> or --run <run-dir> with collected artifacts');
 }

package/dist/query.js.map

@@ -1 +1 @@
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package/dist/types-collection.d.ts

@@ -78,16 +78,19 @@ export interface FrontierCodexArtifactStoreResult {
         totalBytes: number;
         compressedBytes: number;
         blobCount: number;
+        zstdCount?: number;
         gzipCount: number;
         sqliteWritten: boolean;
     };
 }
 export interface FrontierCodexCleanupInput {
     run: string;
+    collection?: string;
     cwd?: string;
     maxAgeHours?: number;
     keepFailed?: boolean;
     keepActive?: boolean;
+    pruneArtifacts?: boolean;
     dryRun?: boolean;
 }
 export interface FrontierCodexCleanupPlan {
@@ -96,6 +99,7 @@ export interface FrontierCodexCleanupPlan {
     ok: boolean;
     dryRun: boolean;
     runDir: string;
+    collectionDir?: string;
     generatedAt: number;
     indexed: boolean;
     candidates: Array<{
@@ -104,6 +108,7 @@ export interface FrontierCodexCleanupPlan {
         bytes: number;
         active: boolean;
         failed: boolean;
+        kind?: 'workspace' | 'artifact-source';
         deleted?: boolean;
     }>;
     blockedReasons: string[];
@@ -111,6 +116,8 @@ export interface FrontierCodexCleanupPlan {
         candidateCount: number;
         deletedCount: number;
         reclaimableBytes: number;
+        workspaceCount?: number;
+        artifactSourceCount?: number;
     };
 }
 export type FrontierCodexApplyStatus = 'checked' | 'applied' | 'committed' | 'skipped' | 'failed';

package/dist/types-collection.d.ts.map

@@ -1 +1 @@
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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@shapeshift-labs/frontier-swarm-codex",
-  "version": "0.5.88",
+  "version": "0.5.89",
   "description": "Node Codex CLI runner adapter for Frontier swarm plans with resource allocation.",
   "type": "module",
   "license": "MIT",