@shapeshift-labs/frontier-swarm-codex 0.5.48 → 0.5.50

package/README.md

@@ -220,6 +220,10 @@ frontier-swarm-codex run \
   --semantic-import \
   --sandbox workspace-write
 
+frontier-swarm doctor \
+  --semantic-import \
+  --out agent-runs/codex-swarm/dependency-health.json
+
 frontier-swarm stop --run agent-runs/codex-swarm/run-1
 
 frontier-swarm collect \
@@ -266,7 +270,9 @@ App-specific adapters should keep orchestration inside this package and use hook
 
 Use `modelPolicy: 'config-default'` for portable swarms that should respect each machine's Codex config. Use `modelPolicy: 'plan'` only when the installed Codex CLI and account are known to accept the planned model IDs. `approval: 'full-auto'` and `--approval-policy full-auto` are normalized to the current `--ask-for-approval never` spelling.
 
-Pass `--semantic-import` or `semanticImport: true` to write a `semantic-imports.json` sidecar for changed source files. The sidecar uses the optional `@shapeshift-labs/frontier-lang` dependency to import supported native sources into Frontier Lang universal ASTs, summarize source maps/losses/semantic indexes/universal AST layers/proof-spec records/paradigm semantics records, record native compile/projection readiness when available, and attach semantic merge-candidate metadata to each worker merge bundle. Use `--semantic-import-include`, `--semantic-import-exclude`, `--semantic-import-max-files`, and `--semantic-import-max-bytes` to keep the import pass scoped. In copied/snapshot workspaces, semantic import selects changed source paths plus concrete task source/target refs so a worker can still produce symbols, ownership regions, universal AST layer quality, proof obligation status, paradigm/lowering hints, and patch hints when changed-path collection is filtered. Include globs support `**` and can match stripped copied-workspace suffixes, so a parent-root glob such as `snes/packages/domain/src/**/*.js` still matches a minimal workspace rooted at `packages/domain` or `src`. Use `--semantic-import-expected` when zero selected/imported files or zero universal AST layers should be called out in patch intent and collection dashboards.
+Pass `--semantic-import` or `semanticImport: true` to write a `semantic-imports.json` sidecar for changed source files. The sidecar uses the optional `@shapeshift-labs/frontier-lang` dependency to import supported native sources into Frontier Lang universal ASTs, summarize source maps/losses/semantic indexes/dependency relations/universal AST layers/proof-spec records/paradigm semantics records, record native compile/projection readiness when available, and attach semantic merge-candidate metadata to each worker merge bundle. Use `--semantic-import-include`, `--semantic-import-exclude`, `--semantic-import-max-files`, and `--semantic-import-max-bytes` to keep the import pass scoped. In copied/snapshot workspaces, semantic import selects changed source paths plus concrete task source/target refs so a worker can still produce symbols, call/use dependency edges, ownership regions, universal AST layer quality, proof obligation status, paradigm/lowering hints, and patch hints when changed-path collection is filtered. Include globs support `**` and can match stripped copied-workspace suffixes, so a parent-root glob such as `snes/packages/domain/src/**/*.js` still matches a minimal workspace rooted at `packages/domain` or `src`. Use `--semantic-import-expected` when zero selected/imported files or zero universal AST layers should be called out in patch intent and collection dashboards.
+
+Every run writes `dependency-health.json` before launching workers unless `dependencyHealth: false` or `--dependency-health=false` is passed. The preflight checks the adapter-local package resolution path plus the caller root, verifies the installed `@shapeshift-labs/frontier-swarm` version, and fails fast when semantic import would resolve a stale or missing optional `@shapeshift-labs/frontier-lang`. Use `frontier-swarm doctor --semantic-import` to run the same check without starting workers. This catches nested optional dependency drift after npm updates before a swarm spends time producing empty semantic sidecars.
 
 ## Minimal Repro Workspaces
 
@@ -287,7 +293,7 @@ Task JSON may declare `dependsOn`, `concurrencyKey`, `budget`, and `review`; the
 
 After updating npm packages in a local multi-package checkout, use `frontier-swarm repair-links` to restore local workspace symlinks without replacing packages you intentionally want from npm. The command reads scoped dependencies from the target `package.json`, discovers matching local packages under one-level package roots, skips `--exclude-package` entries, and writes a JSON plan by default. Add `--write` to create or update symlinks. Existing real package directories are reported as conflicts unless `--replace` is passed, so npm-installed packages are preserved unless replacement is explicit.
 
-Each run writes event streams under `streams/`, a `coordinator-dashboard.json` snapshot, `pids.json`, workspace proofs, patch files, merge bundles, per-job `evidence/evidence.json`, `patch-intent.json`, `log-summary.json`, and job results with merge-readiness classification. The normalized evidence file records changed paths, semantic regions, command pass/fail summaries, source citations, semantic sidecar stats, and ready-to-port patch hunk counts. `patch-intent.json` is the short review surface: what changed, why, risk, exact verification, semantic import quality, warnings, and whether the patch is safe to port manually. Raw Codex stdout/stderr capture is compacted by default; `log-summary.json` records original bytes, written bytes, and truncation counts, and `--max-event-bytes` / `--max-stderr-bytes` can tune the limits. `discoverCodexHandoffArtifacts` scans job directories for `last-message.md`, debug handoffs, replay logs, watchpoints, traces, diagnostics, logs, evidence JSON, and patches; `runCodexJob` adds those paths to result evidence and `metadata.codexHandoffArtifacts` so coordinator dashboards can link directly to replay/debug artifacts. `frontier-swarm stop --run <run-dir>` reads the pid manifest and terminates live worker processes without manually hunting process state.
+Each run writes event streams under `streams/`, a `coordinator-dashboard.json` snapshot, `pids.json`, `dependency-health.json`, workspace proofs, patch files, merge bundles, per-job `evidence/evidence.json`, `patch-intent.json`, `log-summary.json`, and job results with merge-readiness classification. The normalized evidence file records changed paths, semantic regions, command pass/fail summaries, source citations, semantic sidecar stats, and ready-to-port patch hunk counts. `patch-intent.json` is the short review surface: what changed, why, risk, exact verification, semantic import quality, warnings, and whether the patch is safe to port manually. Raw Codex stdout/stderr capture is compacted by default; `log-summary.json` records original bytes, written bytes, and truncation counts, and `--max-event-bytes` / `--max-stderr-bytes` can tune the limits. `discoverCodexHandoffArtifacts` scans job directories for `last-message.md`, debug handoffs, replay logs, watchpoints, traces, diagnostics, logs, evidence JSON, and patches; `runCodexJob` adds those paths to result evidence and `metadata.codexHandoffArtifacts` so coordinator dashboards can link directly to replay/debug artifacts. `frontier-swarm stop --run <run-dir>` reads the pid manifest and terminates live worker processes without manually hunting process state.
 
 `frontier-swarm collect --run <run-dir>` derives status from immutable worker overlays instead of asking workers to edit a central queue. It scans `merge.json` files and writes:
 
@@ -296,11 +302,11 @@ Each run writes event streams under `streams/`, a `coordinator-dashboard.json` s
 - `failed-evidence/` for failed workers, blockers, ownership violations, or failed required commands,
 - `stale-against-head/` for patch bundles that no longer apply.
 
-It also writes `merge-index.json`, `queue-overlay.json`, `evidence-index.json`, `merge-admission.json`, `coordinator-query.json`, and `compact-dashboard.json` so coordinator dashboards can show changed paths, tests, semantic regions, universal AST layer quality, proof obligation status, source citations, risk, ready-to-port hunks, stale patches, duplicate surfaces, semantic import quality, evidence scores, pid liveness, conflicts, derived queue status, and ready merge pressure without scraping every worker directory. Stale checks distinguish patches that fail only because the coordinator worktree is dirty from patches whose base hashes no longer match HEAD. Copied/no-index workspace patches with source-side absolute paths are normalized back to repo-relative paths when possible; patches without comparable base hashes are treated as `needs-human-port`, not stale. The optional `--branch-prefix` adds suggested tiny patch branch names to each collected bundle so accepted slices can become one small branch/commit per surface, evidence path, and queue status overlay.
+It also writes `merge-index.json`, `queue-overlay.json`, `evidence-index.json`, `merge-admission.json`, `coordinator-query.json`, and `compact-dashboard.json` so coordinator dashboards can show changed paths, tests, semantic dependency relations, semantic regions, universal AST layer quality, proof obligation status, source citations, risk, ready-to-port hunks, stale patches, duplicate surfaces, semantic import quality, evidence scores, pid liveness, conflicts, derived queue status, and ready merge pressure without scraping every worker directory. Stale checks distinguish patches that fail only because the coordinator worktree is dirty from patches whose base hashes no longer match HEAD. Copied/no-index workspace patches with source-side absolute paths are normalized back to repo-relative paths when possible; patches without comparable base hashes are treated as `needs-human-port`, not stale. The optional `--branch-prefix` adds suggested tiny patch branch names to each collected bundle so accepted slices can become one small branch/commit per surface, evidence path, and queue status overlay.
 
 `frontier-swarm apply --collection <collection-dir>` reviews the `ready-to-apply/` bucket and writes `apply-ledger.json`. It defaults to `--dry-run`, which runs `git apply --check` without mutating the checkout. Non-dry-run apply refuses a dirty worktree unless `--allow-dirty` is passed, and can optionally create small branches with `--branch-prefix` and commits with `--commit`.
 
-`frontier-swarm score --collection <collection-dir>` applies each collected bundle in a throwaway workspace and writes `patch-score.json`. Use `--focused-command` for the gate that proves the slice and `--global-command` with `--global-glob` for shared-code smoke/type/build gates. Scores are classified as `accepted-clean`, `accepted-needs-port`, `conflict`, `test-fail`, `stale`, or `evidence-only`, so the coordinator can review the best patch candidates before manually reading every bundle. When semantic import sidecars are present, the score entries include `semanticEvidence` with source-map mapping counts, semantic symbols, ownership regions, patch hints, losses, readiness, proof obligation counts, failed/stale proof status, paradigm/lowering record counts, and an advisory score adjustment. Missing or empty semantic evidence downgrades otherwise clean source patches to `accepted-needs-port` instead of treating textual apply success as merge readiness.
+`frontier-swarm score --collection <collection-dir>` applies each collected bundle in a throwaway workspace and writes `patch-score.json`. Use `--focused-command` for the gate that proves the slice and `--global-command` with `--global-glob` for shared-code smoke/type/build gates. Scores are classified as `accepted-clean`, `accepted-needs-port`, `conflict`, `test-fail`, `stale`, or `evidence-only`, so the coordinator can review the best patch candidates before manually reading every bundle. When semantic import sidecars are present, the score entries include `semanticEvidence` with source-map mapping counts, semantic symbols, dependency relation counts/predicates, ownership regions, patch hints, losses, readiness, proof obligation counts, failed/stale proof status, paradigm/lowering record counts, and an advisory score adjustment. Missing or empty semantic evidence downgrades otherwise clean source patches to `accepted-needs-port` instead of treating textual apply success as merge readiness.
 
 ## Surface
 
@@ -319,6 +325,7 @@ It also writes `merge-index.json`, `queue-overlay.json`, `evidence-index.json`,
 - `initFileSwarmEventStream`, `appendFileSwarmEvent`, `writeSwarmCoordinatorSnapshot`
 - `appendCodexPidManifest`, `readCodexPidManifest`, `stopCodexSwarmRun`
 - `repairCodexWorkspacePackageLinks`
+- `checkCodexDependencyHealth`, `writeCodexDependencyHealthReport`
 - `collectCodexSwarmRun`
 - `applyCodexSwarmCollection`
 - `scoreCodexSwarmPatches`
@@ -327,6 +334,7 @@ It also writes `merge-index.json`, `queue-overlay.json`, `evidence-index.json`,
 - `FRONTIER_SWARM_CODEX_SEMANTIC_IMPORT_KIND`
 - `FRONTIER_SWARM_CODEX_PATCH_INTENT_KIND`
 - `FRONTIER_SWARM_CODEX_COMPACT_DASHBOARD_KIND`
+- `FRONTIER_SWARM_CODEX_DEPENDENCY_HEALTH_KIND`
 
 ## Benchmarks
 

package/dist/cli-help.d.ts

@@ -0,0 +1,2 @@
+export declare function printHelp(): void;
+//# sourceMappingURL=cli-help.d.ts.map

package/dist/cli-help.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"cli-help.d.ts","sourceRoot":"","sources":["../src/cli-help.ts"],"names":[],"mappings":"AAAA,wBAAgB,SAAS,IAAI,IAAI,CAkChC"}

package/dist/cli-help.js

@@ -0,0 +1,36 @@
+export function printHelp() {
+    console.log([
+        'frontier-swarm <command> [options]',
+        '',
+        'Commands:',
+        '  plan      Build a swarm plan from --manifest and --tasks',
+        '  run       Run planned jobs through the Codex CLI',
+        '  doctor    Check package resolution before launching workers',
+        '  stop      Stop a run using pids.json',
+        '  collect   Collect merge bundles into ready/needs-port/failed/stale buckets',
+        '  score     Score collected patches in throwaway workspaces',
+        '  apply     Dry-run or apply collected patch bundles',
+        '  repair-links Restore local workspace package symlinks after npm installs',
+        '  verify    Verify a swarm-results.json proof',
+        '',
+        'Useful options:',
+        '  --model-policy config-default|plan|explicit',
+        '  --approval never|on-request|on-failure|untrusted',
+        '  --workspace current|copy|snapshot|git-worktree',
+        '  --replace-workspace false|true',
+        '  --include <path> --exclude <path> --link <path>',
+        '  --semantic-import --semantic-import-include <glob> --semantic-import-exclude <glob>',
+        '  --semantic-import-max-files <n> --semantic-import-max-bytes <n>',
+        '  --semantic-import-expected',
+        '  --dependency-health=false --dependency-health-out <file>',
+        '  --adaptive --adaptive-mode observe|conservative|balanced|aggressive',
+        '  --adaptive-min-concurrency <n> --adaptive-max-concurrency <n>',
+        '  --compact-logs --max-event-bytes <n> --max-stderr-bytes <n>',
+        '  --focused-command <cmd> --global-command <cmd>',
+        '  --package-root <dir> --exclude-package <name> --write --replace',
+        '',
+        'Workers write last-message.md, codex-events.jsonl, resource-allocation.json,',
+        'merge.json, changes.patch, dependency-health.json, and discovered debug/replay/watchpoint/trace artifacts.'
+    ].join('\n'));
+}
+//# sourceMappingURL=cli-help.js.map

package/dist/cli-help.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"cli-help.js","sourceRoot":"","sources":["../src/cli-help.ts"],"names":[],"mappings":"AAAA,MAAM,UAAU,SAAS;IACvB,OAAO,CAAC,GAAG,CAAC;QACV,oCAAoC;QACpC,EAAE;QACF,WAAW;QACX,4DAA4D;QAC5D,oDAAoD;QACpD,+DAA+D;QAC/D,wCAAwC;QACxC,8EAA8E;QAC9E,6DAA6D;QAC7D,sDAAsD;QACtD,4EAA4E;QAC5E,+CAA+C;QAC/C,EAAE;QACF,iBAAiB;QACjB,+CAA+C;QAC/C,oDAAoD;QACpD,kDAAkD;QAClD,kCAAkC;QAClC,mDAAmD;QACnD,uFAAuF;QACvF,mEAAmE;QACnE,8BAA8B;QAC9B,4DAA4D;QAC5D,uEAAuE;QACvE,iEAAiE;QACjE,+DAA+D;QAC/D,kDAAkD;QAClD,mEAAmE;QACnE,EAAE;QACF,8EAA8E;QAC9E,4GAA4G;KAC7G,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC,CAAC;AAChB,CAAC"}

package/dist/cli.js

@@ -1,7 +1,8 @@
 #!/usr/bin/env node
 import fs from 'node:fs/promises';
 import path from 'node:path';
-import { applyCodexSwarmCollection, coerceCodexSwarmManifestInput, coerceCodexSwarmTasksInput, collectCodexSwarmRun, createCodexSwarmPlan, repairCodexWorkspacePackageLinks, runCodexSwarm, scoreCodexSwarmPatches, stopCodexSwarmRun } from './index.js';
+import { applyCodexSwarmCollection, checkCodexDependencyHealth, coerceCodexSwarmManifestInput, coerceCodexSwarmTasksInput, collectCodexSwarmRun, createCodexSwarmPlan, repairCodexWorkspacePackageLinks, runCodexSwarm, scoreCodexSwarmPatches, stopCodexSwarmRun, writeCodexDependencyHealthReport } from './index.js';
+import { printHelp } from './cli-help.js';
 const args = parseArgs(process.argv.slice(2));
 const command = args._[0] ?? 'plan';
 try {
@@ -24,6 +25,7 @@ try {
             maxConcurrency: numberArg(args.maxConcurrency ?? args['max-concurrency'], 1),
             adaptiveConcurrency: adaptiveConcurrencyArg(args),
             compactLogs: compactLogsArg(args),
+            dependencyHealth: dependencyHealthArg(args),
             semanticImportExpected: boolArg(args.semanticImportExpected ?? args['semantic-import-expected'], false),
             sandbox: stringArg(args.sandbox),
             approval: stringArg(args.approval ?? args['ask-for-approval'] ?? args['approval-policy']),
@@ -53,6 +55,21 @@ try {
         if (!result.ok)
             process.exitCode = 1;
     }
+    else if (command === 'doctor') {
+        const outFile = stringArg(args.out ?? args.outFile ?? args['out-file']);
+        const result = await checkCodexDependencyHealth({
+            root: stringArg(args.root),
+            packageRoot: stringArg(args.packageRoot ?? args['package-root']),
+            semanticImport: boolArg(args.semanticImport ?? args['semantic-import'], false),
+            outFile,
+            failOnWarnings: boolArg(args.failOnWarnings ?? args['fail-on-warnings'], false)
+        });
+        if (outFile)
+            await writeCodexDependencyHealthReport(result, path.resolve(outFile));
+        console.log(JSON.stringify(result, null, 2));
+        if (!result.ok)
+            process.exitCode = 1;
+    }
     else if (command === 'verify') {
         const runFile = String(args.run ?? args.results ?? '');
         if (!runFile)
@@ -147,39 +164,6 @@ catch (error) {
     console.error(error instanceof Error ? error.message : String(error));
     process.exitCode = 1;
 }
-function printHelp() {
-    console.log([
-        'frontier-swarm <command> [options]',
-        '',
-        'Commands:',
-        '  plan      Build a swarm plan from --manifest and --tasks',
-        '  run       Run planned jobs through the Codex CLI',
-        '  stop      Stop a run using pids.json',
-        '  collect   Collect merge bundles into ready/needs-port/failed/stale buckets',
-        '  score     Score collected patches in throwaway workspaces',
-        '  apply     Dry-run or apply collected patch bundles',
-        '  repair-links Restore local workspace package symlinks after npm installs',
-        '  verify    Verify a swarm-results.json proof',
-        '',
-        'Useful options:',
-        '  --model-policy config-default|plan|explicit',
-        '  --approval never|on-request|on-failure|untrusted',
-        '  --workspace current|copy|snapshot|git-worktree',
-        '  --replace-workspace false|true',
-        '  --include <path> --exclude <path> --link <path>',
-        '  --semantic-import --semantic-import-include <glob> --semantic-import-exclude <glob>',
-        '  --semantic-import-max-files <n> --semantic-import-max-bytes <n>',
-        '  --semantic-import-expected',
-        '  --adaptive --adaptive-mode observe|conservative|balanced|aggressive',
-        '  --adaptive-min-concurrency <n> --adaptive-max-concurrency <n>',
-        '  --compact-logs --max-event-bytes <n> --max-stderr-bytes <n>',
-        '  --focused-command <cmd> --global-command <cmd>',
-        '  --package-root <dir> --exclude-package <name> --write --replace',
-        '',
-        'Workers write last-message.md, codex-events.jsonl, resource-allocation.json,',
-        'merge.json, changes.patch, and discovered debug/replay/watchpoint/trace artifacts.'
-    ].join('\n'));
-}
 async function loadPlan(options) {
     const manifestPath = String(options.manifest ?? '');
     const tasksPath = String(options.tasks ?? '');
@@ -290,6 +274,16 @@ function compactLogsArg(args) {
         maxStderrBytes: numberArg(args.maxStderrBytes ?? args['max-stderr-bytes'], undefined)
     };
 }
+function dependencyHealthArg(args) {
+    const raw = args.dependencyHealth ?? args['dependency-health'];
+    if (raw !== undefined && !boolArg(raw, true))
+        return false;
+    return {
+        semanticImport: boolArg(args.semanticImport ?? args['semantic-import'] ?? args.semanticImportExpected ?? args['semantic-import-expected'], false),
+        outFile: stringArg(args.dependencyHealthOut ?? args['dependency-health-out']),
+        failOnWarnings: boolArg(args.failOnWarnings ?? args['fail-on-warnings'], false)
+    };
+}
 function commandListArg(value) {
     if (value === undefined)
         return undefined;

package/dist/cli.js.map

@@ -1 +1 @@
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package/dist/codex-job-paths.d.ts

@@ -0,0 +1,4 @@
+import type { FrontierSwarmJob } from '@shapeshift-labs/frontier-swarm';
+import type { FrontierCodexJobPaths, FrontierCodexSwarmRunOptions } from './index.js';
+export declare function createCodexJobPaths(outDir: string, job: FrontierSwarmJob, options: FrontierCodexSwarmRunOptions): Promise<FrontierCodexJobPaths>;
+//# sourceMappingURL=codex-job-paths.d.ts.map

package/dist/codex-job-paths.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"codex-job-paths.d.ts","sourceRoot":"","sources":["../src/codex-job-paths.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EAAE,gBAAgB,EAAE,MAAM,iCAAiC,CAAC;AACxE,OAAO,KAAK,EAAE,qBAAqB,EAAE,4BAA4B,EAAE,MAAM,YAAY,CAAC;AAEtF,wBAAsB,mBAAmB,CACvC,MAAM,EAAE,MAAM,EACd,GAAG,EAAE,gBAAgB,EACrB,OAAO,EAAE,4BAA4B,GACpC,OAAO,CAAC,qBAAqB,CAAC,CAmBhC"}

package/dist/codex-job-paths.js

@@ -0,0 +1,23 @@
+import fs from 'node:fs/promises';
+import path from 'node:path';
+export async function createCodexJobPaths(outDir, job, options) {
+    const jobDir = path.join(outDir, job.id);
+    const paths = {
+        jobDir,
+        promptPath: path.join(jobDir, 'prompt.md'),
+        eventsPath: path.join(jobDir, 'codex-events.jsonl'),
+        stderrPath: path.join(jobDir, 'codex-stderr.log'),
+        lastMessagePath: path.join(jobDir, 'last-message.md'),
+        evidenceDir: path.join(jobDir, 'evidence'),
+        resourceAllocationPath: path.join(jobDir, 'evidence', 'resource-allocation.json'),
+        workspaceProofPath: path.join(jobDir, 'evidence', 'workspace-proof.json'),
+        patchPath: path.join(jobDir, 'evidence', 'changes.patch'),
+        mergeBundlePath: path.join(jobDir, 'evidence', 'merge.json'),
+        patchIntentPath: path.join(jobDir, 'evidence', 'patch-intent.json'),
+        logSummaryPath: path.join(jobDir, 'evidence', 'log-summary.json'),
+        pidManifestPath: path.resolve(options.cwd ?? process.cwd(), options.pidManifestPath ?? path.join(outDir, 'pids.json'))
+    };
+    await fs.mkdir(paths.evidenceDir, { recursive: true });
+    return paths;
+}
+//# sourceMappingURL=codex-job-paths.js.map

package/dist/codex-job-paths.js.map

@@ -0,0 +1 @@
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package/dist/codex-run-health.d.ts

@@ -0,0 +1,4 @@
+import type { FrontierSwarmPlan } from '@shapeshift-labs/frontier-swarm';
+import type { FrontierCodexDependencyHealthReport, FrontierCodexSwarmRunOptions } from './index.js';
+export declare function runCodexDependencyHealthPreflight(plan: FrontierSwarmPlan, options: FrontierCodexSwarmRunOptions, outDir: string): Promise<FrontierCodexDependencyHealthReport | undefined>;
+//# sourceMappingURL=codex-run-health.d.ts.map

package/dist/codex-run-health.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"codex-run-health.d.ts","sourceRoot":"","sources":["../src/codex-run-health.ts"],"names":[],"mappings":"AACA,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,iCAAiC,CAAC;AAGzE,OAAO,KAAK,EAEV,mCAAmC,EACnC,4BAA4B,EAC7B,MAAM,YAAY,CAAC;AAEpB,wBAAsB,iCAAiC,CACrD,IAAI,EAAE,iBAAiB,EACvB,OAAO,EAAE,4BAA4B,EACrC,MAAM,EAAE,MAAM,GACb,OAAO,CAAC,mCAAmC,GAAG,SAAS,CAAC,CAa1D"}

package/dist/codex-run-health.js

@@ -0,0 +1,27 @@
+import path from 'node:path';
+import { checkCodexDependencyHealth, writeCodexDependencyHealthReport } from './dependency-health.js';
+import { semanticImportEnabled } from './semantic-import-quality.js';
+export async function runCodexDependencyHealthPreflight(plan, options, outDir) {
+    if (options.dependencyHealth === false)
+        return undefined;
+    const semanticImport = options.semanticImportExpected ?? semanticImportEnabled(options.semanticImport);
+    const healthOptions = normalizeDependencyHealthOptions(options.dependencyHealth, options.cwd, semanticImport);
+    const report = await checkCodexDependencyHealth(healthOptions);
+    const outFile = healthOptions.outFile
+        ? path.resolve(options.cwd ?? process.cwd(), healthOptions.outFile)
+        : path.join(outDir, 'dependency-health.json');
+    await writeCodexDependencyHealthReport(report, outFile);
+    if (!report.ok) {
+        throw new Error(`frontier-swarm dependency health failed before run ${plan.runId}; see ${outFile}`);
+    }
+    return report;
+}
+function normalizeDependencyHealthOptions(input, root, semanticImport) {
+    const options = input && typeof input === 'object' ? input : {};
+    return {
+        ...options,
+        root: options.root ?? root,
+        semanticImport: options.semanticImport ?? semanticImport
+    };
+}
+//# sourceMappingURL=codex-run-health.js.map

package/dist/codex-run-health.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"codex-run-health.js","sourceRoot":"","sources":["../src/codex-run-health.ts"],"names":[],"mappings":"AAAA,OAAO,IAAI,MAAM,WAAW,CAAC;AAE7B,OAAO,EAAE,0BAA0B,EAAE,gCAAgC,EAAE,MAAM,wBAAwB,CAAC;AACtG,OAAO,EAAE,qBAAqB,EAAE,MAAM,8BAA8B,CAAC;AAOrE,MAAM,CAAC,KAAK,UAAU,iCAAiC,CACrD,IAAuB,EACvB,OAAqC,EACrC,MAAc;IAEd,IAAI,OAAO,CAAC,gBAAgB,KAAK,KAAK;QAAE,OAAO,SAAS,CAAC;IACzD,MAAM,cAAc,GAAG,OAAO,CAAC,sBAAsB,IAAI,qBAAqB,CAAC,OAAO,CAAC,cAAc,CAAC,CAAC;IACvG,MAAM,aAAa,GAAG,gCAAgC,CAAC,OAAO,CAAC,gBAAgB,EAAE,OAAO,CAAC,GAAG,EAAE,cAAc,CAAC,CAAC;IAC9G,MAAM,MAAM,GAAG,MAAM,0BAA0B,CAAC,aAAa,CAAC,CAAC;IAC/D,MAAM,OAAO,GAAG,aAAa,CAAC,OAAO;QACnC,CAAC,CAAC,IAAI,CAAC,OAAO,CAAC,OAAO,CAAC,GAAG,IAAI,OAAO,CAAC,GAAG,EAAE,EAAE,aAAa,CAAC,OAAO,CAAC;QACnE,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC,MAAM,EAAE,wBAAwB,CAAC,CAAC;IAChD,MAAM,gCAAgC,CAAC,MAAM,EAAE,OAAO,CAAC,CAAC;IACxD,IAAI,CAAC,MAAM,CAAC,EAAE,EAAE,CAAC;QACf,MAAM,IAAI,KAAK,CAAC,sDAAsD,IAAI,CAAC,KAAK,SAAS,OAAO,EAAE,CAAC,CAAC;IACtG,CAAC;IACD,OAAO,MAAM,CAAC;AAChB,CAAC;AAED,SAAS,gCAAgC,CACvC,KAAiE,EACjE,IAAwB,EACxB,cAAuB;IAEvB,MAAM,OAAO,GAAG,KAAK,IAAI,OAAO,KAAK,KAAK,QAAQ,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,EAAE,CAAC;IAChE,OAAO;QACL,GAAG,OAAO;QACV,IAAI,EAAE,OAAO,CAAC,IAAI,IAAI,IAAI;QAC1B,cAAc,EAAE,OAAO,CAAC,cAAc,IAAI,cAAc;KACzD,CAAC;AACJ,CAAC"}

package/dist/codex-run.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"codex-run.d.ts","sourceRoot":"","sources":["../src/codex-run.ts"],"names":[],"mappings":"AAEA,OAAO,EAQL,KAAK,gBAAgB,EACrB,KAAK,2BAA2B,EAChC,KAAK,kBAAkB,EAEvB,KAAK,iBAAiB,EACvB,MAAM,iCAAiC,CAAC;AA4BzC,OAAO,KAAK,EAGV,4BAA4B,EAC5B,2BAA2B,EAC5B,MAAM,YAAY,CAAC;AACpB,wBAAsB,aAAa,CAAC,IAAI,EAAE,iBAAiB,EAAE,OAAO,EAAE,4BAA4B,GAAG,OAAO,CAAC,2BAA2B,CAAC,CA0DxI;AAED,wBAAsB,WAAW,CAC/B,GAAG,EAAE,gBAAgB,EACrB,OAAO,EAAE,4BAA4B,EACrC,MAAM,EAAE,MAAM,EACd,KAAK,CAAC,EAAE,kBAAkB,GACzB,OAAO,CAAC,2BAA2B,CAAC,CAoLtC"}
+{"version":3,"file":"codex-run.d.ts","sourceRoot":"","sources":["../src/codex-run.ts"],"names":[],"mappings":"AAEA,OAAO,EAQL,KAAK,gBAAgB,EACrB,KAAK,2BAA2B,EAChC,KAAK,kBAAkB,EAEvB,KAAK,iBAAiB,EACvB,MAAM,iCAAiC,CAAC;AA8BzC,OAAO,KAAK,EAGV,4BAA4B,EAC5B,2BAA2B,EAC5B,MAAM,YAAY,CAAC;AACpB,wBAAsB,aAAa,CAAC,IAAI,EAAE,iBAAiB,EAAE,OAAO,EAAE,4BAA4B,GAAG,OAAO,CAAC,2BAA2B,CAAC,CA2DxI;AAED,wBAAsB,WAAW,CAC/B,GAAG,EAAE,gBAAgB,EACrB,OAAO,EAAE,4BAA4B,EACrC,MAAM,EAAE,MAAM,EACd,KAAK,CAAC,EAAE,kBAAkB,GACzB,OAAO,CAAC,2BAA2B,CAAC,CAoLtC"}

package/dist/codex-run.js

@@ -9,6 +9,8 @@ import { discoverCodexHandoffArtifacts } from './handoff-artifacts.js';
 import { appendCodexPidManifest, appendFileSwarmEvent, initFileSwarmEventStream, writeSwarmCoordinatorSnapshot } from './codex-events.js';
 import { createEmptyCodexLogSummary, normalizeCompactLogOptions, spawnCodexExecutor } from './codex-executor.js';
 import { buildCodexArgs, createCodexResourceAllocation, renderCodexPrompt } from './codex-prompt.js';
+import { createCodexJobPaths } from './codex-job-paths.js';
+import { runCodexDependencyHealthPreflight } from './codex-run-health.js';
 import { runScheduledJobPool } from './codex-run-scheduler.js';
 import { createCodexWorkspacePlan, createSwarmWorkspaceProof, prepareCodexWorkspace } from './codex-workspace.js';
 import { collectChangedPaths, filterWorkspaceChangedPaths, runVerification, shouldSnapshotWorkspaceChanges, snapshotWorkspaceFiles, writeCodexPatchFile } from './codex-workspace-changes.js';
@@ -16,6 +18,7 @@ export async function runCodexSwarm(plan, options) {
     const outDir = path.resolve(options.cwd ?? process.cwd(), options.outDir);
     await fs.mkdir(outDir, { recursive: true });
     await fs.writeFile(path.join(outDir, 'swarm-plan.json'), JSON.stringify(plan, null, 2) + '\n');
+    await runCodexDependencyHealthPreflight(plan, options, outDir);
     const eventStream = options.eventStream ?? createSwarmEventStream({
         runId: plan.runId,
         root: path.join(outDir, 'streams'),
@@ -73,7 +76,7 @@ export async function runCodexSwarm(plan, options) {
     return result;
 }
 export async function runCodexJob(job, options, outDir, lease) {
-    const paths = await createJobPaths(outDir, job, options);
+    const paths = await createCodexJobPaths(outDir, job, options);
     const workspace = await prepareCodexWorkspace(job, options);
     const workspacePlan = createCodexWorkspacePlan(job, options);
     const resourceAllocation = createCodexResourceAllocation(job, {
@@ -255,24 +258,4 @@ export async function runCodexJob(job, options, outDir, lease) {
     });
     return result;
 }
-async function createJobPaths(outDir, job, options) {
-    const jobDir = path.join(outDir, job.id);
-    const paths = {
-        jobDir,
-        promptPath: path.join(jobDir, 'prompt.md'),
-        eventsPath: path.join(jobDir, 'codex-events.jsonl'),
-        stderrPath: path.join(jobDir, 'codex-stderr.log'),
-        lastMessagePath: path.join(jobDir, 'last-message.md'),
-        evidenceDir: path.join(jobDir, 'evidence'),
-        resourceAllocationPath: path.join(jobDir, 'evidence', 'resource-allocation.json'),
-        workspaceProofPath: path.join(jobDir, 'evidence', 'workspace-proof.json'),
-        patchPath: path.join(jobDir, 'evidence', 'changes.patch'),
-        mergeBundlePath: path.join(jobDir, 'evidence', 'merge.json'),
-        patchIntentPath: path.join(jobDir, 'evidence', 'patch-intent.json'),
-        logSummaryPath: path.join(jobDir, 'evidence', 'log-summary.json'),
-        pidManifestPath: path.resolve(options.cwd ?? process.cwd(), options.pidManifestPath ?? path.join(outDir, 'pids.json'))
-    };
-    await fs.mkdir(paths.evidenceDir, { recursive: true });
-    return paths;
-}
 //# sourceMappingURL=codex-run.js.map

package/dist/codex-run.js.map

@@ -1 +1 @@
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package/dist/collect-evidence.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"collect-evidence.d.ts","sourceRoot":"","sources":["../src/collect-evidence.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EAAE,oCAAoC,EAAE,wBAAwB,EAAE,MAAM,iCAAiC,CAAC;AAEtH,OAAO,KAAK,EAAE,0BAA0B,EAAkG,MAAM,YAAY,CAAC;AAU7J,wBAAsB,mCAAmC,CAAC,KAAK,EAAE;IAC/D,IAAI,EAAE,MAAM,CAAC;IACb,MAAM,EAAE,wBAAwB,CAAC;IACjC,MAAM,EAAE,0BAA0B,CAAC;IACnC,SAAS,EAAE,MAAM,CAAC;IAClB,SAAS,CAAC,EAAE,MAAM,CAAC;IACnB,WAAW,EAAE,MAAM,CAAC;IACpB,YAAY,CAAC,EAAE,SAAS,MAAM,EAAE,CAAC;CAClC,GAAG,OAAO,CAAC,IAAI,CAAC,CAiDhB;AAeD,wBAAgB,8BAA8B,CAC5C,MAAM,EAAE,wBAAwB,EAChC,qBAAqB,EAAE,MAAM,EAC7B,MAAM,EAAE,0BAA0B,GACjC,oCAAoC,EAAE,CAuDxC"}
+{"version":3,"file":"collect-evidence.d.ts","sourceRoot":"","sources":["../src/collect-evidence.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EAAE,oCAAoC,EAAE,wBAAwB,EAAE,MAAM,iCAAiC,CAAC;AAEtH,OAAO,KAAK,EAAE,0BAA0B,EAAkG,MAAM,YAAY,CAAC;AAU7J,wBAAsB,mCAAmC,CAAC,KAAK,EAAE;IAC/D,IAAI,EAAE,MAAM,CAAC;IACb,MAAM,EAAE,wBAAwB,CAAC;IACjC,MAAM,EAAE,0BAA0B,CAAC;IACnC,SAAS,EAAE,MAAM,CAAC;IAClB,SAAS,CAAC,EAAE,MAAM,CAAC;IACnB,WAAW,EAAE,MAAM,CAAC;IACpB,YAAY,CAAC,EAAE,SAAS,MAAM,EAAE,CAAC;CAClC,GAAG,OAAO,CAAC,IAAI,CAAC,CAiDhB;AAeD,wBAAgB,8BAA8B,CAC5C,MAAM,EAAE,wBAAwB,EAChC,qBAAqB,EAAE,MAAM,EAC7B,MAAM,EAAE,0BAA0B,GACjC,oCAAoC,EAAE,CAyDxC"}

package/dist/collect-evidence.js

@@ -93,6 +93,8 @@ export function createCollectedEvidenceEntries(bundle, collectedEvidencePath, bu
                 staleAgainstHead: bundle.staleAgainstHead,
                 semanticSymbols: bundle.semanticImport?.semanticIndex.symbols ?? 0,
                 semanticRegions: bundle.semanticImport?.semanticSidecars.ownershipRegions ?? 0,
+                semanticDependencyRelations: bundle.semanticImport?.dependencies?.total ?? 0,
+                semanticDependencyPredicates: bundle.semanticImport?.dependencies?.predicates?.join(',') ?? '',
                 universalAstLayers: universalAstLayers.total,
                 universalAstLayerNames: universalAstLayers.names.join(','),
                 proofSpecObligations: semanticImportProofSpecSummary(bundle.semanticImport).obligations,

package/dist/collect-evidence.js.map

@@ -1 +1 @@
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package/dist/constants.d.ts

@@ -22,4 +22,6 @@ export declare const FRONTIER_SWARM_CODEX_COMPACT_DASHBOARD_KIND = "frontier.swa
 export declare const FRONTIER_SWARM_CODEX_COMPACT_DASHBOARD_VERSION = 1;
 export declare const FRONTIER_SWARM_CODEX_LINK_REPAIR_KIND = "frontier.swarm-codex.link-repair";
 export declare const FRONTIER_SWARM_CODEX_LINK_REPAIR_VERSION = 1;
+export declare const FRONTIER_SWARM_CODEX_DEPENDENCY_HEALTH_KIND = "frontier.swarm-codex.dependency-health";
+export declare const FRONTIER_SWARM_CODEX_DEPENDENCY_HEALTH_VERSION = 1;
 //# sourceMappingURL=constants.d.ts.map

package/dist/constants.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"constants.d.ts","sourceRoot":"","sources":["../src/constants.ts"],"names":[],"mappings":"AAKA,eAAO,MAAM,kCAAkC,YAA+B,CAAC;AAC/E,eAAO,MAAM,6CAA6C,UAA0C,CAAC;AACrG,eAAO,MAAM,4CAA4C,4CAA4C,CAAC;AACtG,eAAO,MAAM,+CAA+C,IAAI,CAAC;AACjE,eAAO,MAAM,yCAAyC,yCAAyC,CAAC;AAChG,eAAO,MAAM,4CAA4C,IAAI,CAAC;AAC9D,eAAO,MAAM,sCAAsC,sCAAsC,CAAC;AAC1F,eAAO,MAAM,yCAAyC,IAAI,CAAC;AAC3D,eAAO,MAAM,oCAAoC,oCAAoC,CAAC;AACtF,eAAO,MAAM,uCAAuC,IAAI,CAAC;AACzD,eAAO,MAAM,sCAAsC,sCAAsC,CAAC;AAC1F,eAAO,MAAM,yCAAyC,IAAI,CAAC;AAC3D,eAAO,MAAM,qCAAqC,qCAAqC,CAAC;AACxF,eAAO,MAAM,wCAAwC,IAAI,CAAC;AAC1D,eAAO,MAAM,yCAAyC,0CAA0C,CAAC;AACjG,eAAO,MAAM,4CAA4C,IAAI,CAAC;AAC9D,eAAO,MAAM,sCAAsC,sCAAsC,CAAC;AAC1F,eAAO,MAAM,yCAAyC,IAAI,CAAC;AAC3D,eAAO,MAAM,sCAAsC,sCAAsC,CAAC;AAC1F,eAAO,MAAM,yCAAyC,IAAI,CAAC;AAC3D,eAAO,MAAM,2CAA2C,2CAA2C,CAAC;AACpG,eAAO,MAAM,8CAA8C,IAAI,CAAC;AAChE,eAAO,MAAM,qCAAqC,qCAAqC,CAAC;AACxF,eAAO,MAAM,wCAAwC,IAAI,CAAC"}
+{"version":3,"file":"constants.d.ts","sourceRoot":"","sources":["../src/constants.ts"],"names":[],"mappings":"AAKA,eAAO,MAAM,kCAAkC,YAA+B,CAAC;AAC/E,eAAO,MAAM,6CAA6C,UAA0C,CAAC;AACrG,eAAO,MAAM,4CAA4C,4CAA4C,CAAC;AACtG,eAAO,MAAM,+CAA+C,IAAI,CAAC;AACjE,eAAO,MAAM,yCAAyC,yCAAyC,CAAC;AAChG,eAAO,MAAM,4CAA4C,IAAI,CAAC;AAC9D,eAAO,MAAM,sCAAsC,sCAAsC,CAAC;AAC1F,eAAO,MAAM,yCAAyC,IAAI,CAAC;AAC3D,eAAO,MAAM,oCAAoC,oCAAoC,CAAC;AACtF,eAAO,MAAM,uCAAuC,IAAI,CAAC;AACzD,eAAO,MAAM,sCAAsC,sCAAsC,CAAC;AAC1F,eAAO,MAAM,yCAAyC,IAAI,CAAC;AAC3D,eAAO,MAAM,qCAAqC,qCAAqC,CAAC;AACxF,eAAO,MAAM,wCAAwC,IAAI,CAAC;AAC1D,eAAO,MAAM,yCAAyC,0CAA0C,CAAC;AACjG,eAAO,MAAM,4CAA4C,IAAI,CAAC;AAC9D,eAAO,MAAM,sCAAsC,sCAAsC,CAAC;AAC1F,eAAO,MAAM,yCAAyC,IAAI,CAAC;AAC3D,eAAO,MAAM,sCAAsC,sCAAsC,CAAC;AAC1F,eAAO,MAAM,yCAAyC,IAAI,CAAC;AAC3D,eAAO,MAAM,2CAA2C,2CAA2C,CAAC;AACpG,eAAO,MAAM,8CAA8C,IAAI,CAAC;AAChE,eAAO,MAAM,qCAAqC,qCAAqC,CAAC;AACxF,eAAO,MAAM,wCAAwC,IAAI,CAAC;AAC1D,eAAO,MAAM,2CAA2C,2CAA2C,CAAC;AACpG,eAAO,MAAM,8CAA8C,IAAI,CAAC"}

package/dist/constants.js

@@ -23,4 +23,6 @@ export const FRONTIER_SWARM_CODEX_COMPACT_DASHBOARD_KIND = 'frontier.swarm-codex
 export const FRONTIER_SWARM_CODEX_COMPACT_DASHBOARD_VERSION = 1;
 export const FRONTIER_SWARM_CODEX_LINK_REPAIR_KIND = 'frontier.swarm-codex.link-repair';
 export const FRONTIER_SWARM_CODEX_LINK_REPAIR_VERSION = 1;
+export const FRONTIER_SWARM_CODEX_DEPENDENCY_HEALTH_KIND = 'frontier.swarm-codex.dependency-health';
+export const FRONTIER_SWARM_CODEX_DEPENDENCY_HEALTH_VERSION = 1;
 //# sourceMappingURL=constants.js.map

package/dist/constants.js.map

@@ -1 +1 @@
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package/dist/dashboard.d.ts.map

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package/dist/dashboard.js

@@ -49,6 +49,8 @@ export function createCodexCompactDashboard(input) {
             symbolCount: semanticQualities.reduce((sum, entry) => sum + entry.symbols, 0),
             ownershipRegionCount: semanticQualities.reduce((sum, entry) => sum + entry.ownershipRegions, 0),
             patchHintCount: semanticQualities.reduce((sum, entry) => sum + entry.patchHints, 0),
+            dependencyRelationCount: semanticQualities.reduce((sum, entry) => sum + entry.dependencyRelations, 0),
+            dependencyPredicates: uniqueStrings(semanticQualities.flatMap((entry) => entry.dependencyPredicates)),
             universalAstLayerCount: semanticQualities.reduce((sum, entry) => sum + entry.universalAstLayers, 0),
             universalAstLayerNames: uniqueStrings(semanticQualities.flatMap((entry) => entry.universalAstLayerNames)),
             proofSpecObligations: semanticQualities.reduce((sum, entry) => sum + entry.proofSpecObligations, 0),