@shahmarasy/prodo 0.1.4 → 0.1.6

package/src/{init.ts → cli/init.ts}

@@ -1,399 +1,400 @@
-import fs from "node:fs/promises";
-import path from "node:path";
-import { createHash } from "node:crypto";
-import yaml from "js-yaml";
-import { installAgentCommands, type SupportedAi } from "./agent-command-installer";
-import { listArtifactDefinitions } from "./artifact-registry";
-import { ensureDir, fileExists } from "./utils";
-import { briefPath, outputDirPath, outputIndexPath, prodoPath } from "./paths";
-import { applyConfiguredPresets } from "./preset-loader";
-import { syncRegistry } from "./registry";
-import { writeSettings } from "./settings";
-import { extractRequiredHeadingsFromTemplate } from "./template-resolver";
-import { buildWorkflowCommands } from "./workflow-commands";
-import {
-  NORMALIZED_BRIEF_TEMPLATE,
-  NORMALIZE_PROMPT_TEMPLATE,
-  START_BRIEF_TEMPLATE,
-  HOOKS_TEMPLATE,
-  artifactTemplateTemplate,
-  commandTemplate,
-  promptTemplate,
-  schemaTemplate
-} from "./templates";
-
-type AssetManifestItem = {
-  source: string;
-  target: string;
-  source_sha256: string;
-  target_sha256: string | null;
-  status: "match" | "drift" | "missing" | "protected" | "updated" | "unmanaged";
-};
-
-type ScaffoldManifest = {
-  schema_version: "1.0";
-  generated_at: string;
-  prodo_version: string;
-  copied_asset_count: number;
-  copied_assets: Array<{ source: string; target: string; sha256: string }>;
-  asset_count: number;
-  parity_summary: {
-    match_count: number;
-    drift_count: number;
-    missing_count: number;
-    protected_count: number;
-    updated_count: number;
-    unmanaged_count: number;
-  };
-  assets: AssetManifestItem[];
-};
-
-type SourceTargetPair = { sourceDir: string; targetDir: string };
-type BackupMap = Map<string, Buffer | null>;
-
-function templateFileName(artifactType: string): string {
-  if (artifactType === "workflow") return `${artifactType}.mmd`;
-  if (artifactType === "wireframe") return `${artifactType}.html`;
-  return `${artifactType}.md`;
-}
-
-async function writeFileIfMissing(filePath: string, content: string): Promise<void> {
-  if (await fileExists(filePath)) return;
-  await fs.writeFile(filePath, content, "utf8");
-}
-
-async function readProdoVersion(cwd: string): Promise<string> {
-  const candidates = [
-    path.join(cwd, "package.json"),
-    path.resolve(__dirname, "..", "package.json")
-  ];
-  for (const candidate of candidates) {
-    if (!(await fileExists(candidate))) continue;
-    try {
-      const parsed = JSON.parse(await fs.readFile(candidate, "utf8")) as { version?: string };
-      if (typeof parsed.version === "string" && parsed.version.trim().length > 0) return parsed.version;
-    } catch {
-      // ignore and continue
-    }
-  }
-  return "0.0.0-dev";
-}
-
-async function fileSha256(filePath: string): Promise<string> {
-  const content = await fs.readFile(filePath);
-  return createHash("sha256").update(content).digest("hex");
-}
-
-async function listFilesRecursive(rootDir: string): Promise<string[]> {
-  if (!(await fileExists(rootDir))) return [];
-  const out: string[] = [];
-  const walk = async (current: string): Promise<void> => {
-    const entries = await fs.readdir(current, { withFileTypes: true });
-    for (const entry of entries) {
-      const full = path.join(current, entry.name);
-      if (entry.isDirectory()) {
-        await walk(full);
-      } else {
-        out.push(full);
-      }
-    }
-  };
-  await walk(rootDir);
-  return out;
-}
-
-async function loadPreviousManifest(root: string): Promise<ScaffoldManifest | null> {
-  const manifestPath = path.join(root, "scaffold-manifest.json");
-  if (!(await fileExists(manifestPath))) return null;
-  try {
-    const parsed = JSON.parse(await fs.readFile(manifestPath, "utf8")) as Partial<ScaffoldManifest>;
-    if (!Array.isArray(parsed.assets)) return null;
-    return {
-      schema_version: "1.0",
-      generated_at: parsed.generated_at ?? "",
-      prodo_version: parsed.prodo_version ?? "0.0.0-dev",
-      copied_asset_count: Number(parsed.copied_asset_count ?? 0),
-      copied_assets: Array.isArray(parsed.copied_assets) ? parsed.copied_assets : [],
-      asset_count: Number(parsed.asset_count ?? 0),
-      parity_summary: {
-        match_count: Number(parsed.parity_summary?.match_count ?? 0),
-        drift_count: Number(parsed.parity_summary?.drift_count ?? 0),
-        missing_count: Number(parsed.parity_summary?.missing_count ?? 0),
-        protected_count: Number(parsed.parity_summary?.protected_count ?? 0),
-        updated_count: Number(parsed.parity_summary?.updated_count ?? 0),
-        unmanaged_count: Number(parsed.parity_summary?.unmanaged_count ?? 0)
-      },
-      assets: parsed.assets as AssetManifestItem[]
-    };
-  } catch {
-    return null;
-  }
-}
-
-async function copyDirIfMissing(
-  sourceDir: string,
-  targetDir: string,
-  copiedAssets: Array<{ source: string; target: string; sha256: string }>
-): Promise<void> {
-  if (!(await fileExists(sourceDir))) return;
-  await ensureDir(targetDir);
-  const entries = await fs.readdir(sourceDir, { withFileTypes: true });
-  for (const entry of entries) {
-    const src = path.join(sourceDir, entry.name);
-    const dst = path.join(targetDir, entry.name);
-    if (entry.isDirectory()) {
-      await copyDirIfMissing(src, dst, copiedAssets);
-      continue;
-    }
-    if (await fileExists(dst)) continue;
-    await fs.copyFile(src, dst);
-    copiedAssets.push({
-      source: src,
-      target: dst,
-      sha256: await fileSha256(dst)
-    });
-  }
-}
-
-async function refreshLegacyCommandTemplates(sourceDir: string, targetDir: string): Promise<void> {
-  if (!(await fileExists(sourceDir)) || !(await fileExists(targetDir))) return;
-  const entries = await fs.readdir(sourceDir, { withFileTypes: true });
-  for (const entry of entries) {
-    if (!entry.isFile()) continue;
-    if (!entry.name.startsWith("prodo-") || !entry.name.endsWith(".md")) continue;
-    const src = path.join(sourceDir, entry.name);
-    const dst = path.join(targetDir, entry.name);
-    if (!(await fileExists(dst))) continue;
-    const existing = await fs.readFile(dst, "utf8");
-    const isLegacyRunMode = /run:\s*\n\s*action:\s*[^\n]+/m.test(existing) || /mode:\s*internal-runtime/m.test(existing);
-    if (!isLegacyRunMode) continue;
-    await fs.copyFile(src, dst);
-  }
-}
-
-async function buildAssetManifest(
-  pairs: SourceTargetPair[],
-  previous: ScaffoldManifest | null,
-  backup: BackupMap
-): Promise<AssetManifestItem[]> {
-  const previousByTarget = new Map<string, AssetManifestItem>();
-  for (const item of previous?.assets ?? []) {
-    previousByTarget.set(path.resolve(item.target), item);
-  }
-
-  const items: AssetManifestItem[] = [];
-  for (const pair of pairs) {
-    const sourceFiles = await listFilesRecursive(pair.sourceDir);
-    for (const sourceFile of sourceFiles) {
-      const relative = path.relative(pair.sourceDir, sourceFile);
-      const targetFile = path.join(pair.targetDir, relative);
-      const resolvedTarget = path.resolve(targetFile);
-      const sourceHash = await fileSha256(sourceFile);
-      const targetExists = await fileExists(targetFile);
-
-      if (!targetExists) {
-        await ensureDir(path.dirname(targetFile));
-        backup.set(resolvedTarget, null);
-        await fs.copyFile(sourceFile, targetFile);
-        items.push({
-          source: sourceFile,
-          target: targetFile,
-          source_sha256: sourceHash,
-          target_sha256: await fileSha256(targetFile),
-          status: "missing"
-        });
-        continue;
-      }
-
-      const currentTargetHash = await fileSha256(targetFile);
-      const prev = previousByTarget.get(resolvedTarget);
-      const prevTargetHash = prev?.target_sha256 ?? null;
-      const prevSourceHash = prev?.source_sha256 ?? null;
-
-      if (currentTargetHash === sourceHash) {
-        items.push({
-          source: sourceFile,
-          target: targetFile,
-          source_sha256: sourceHash,
-          target_sha256: currentTargetHash,
-          status: "match"
-        });
-        continue;
-      }
-
-      if (prev && prevTargetHash && prevSourceHash && currentTargetHash === prevTargetHash && prevSourceHash !== sourceHash) {
-        if (!backup.has(resolvedTarget)) {
-          backup.set(resolvedTarget, await fs.readFile(targetFile));
-        }
-        await fs.copyFile(sourceFile, targetFile);
-        items.push({
-          source: sourceFile,
-          target: targetFile,
-          source_sha256: sourceHash,
-          target_sha256: await fileSha256(targetFile),
-          status: "updated"
-        });
-        continue;
-      }
-
-      if (prev) {
-        items.push({
-          source: sourceFile,
-          target: targetFile,
-          source_sha256: sourceHash,
-          target_sha256: currentTargetHash,
-          status: "protected"
-        });
-        continue;
-      }
-
-      items.push({
-        source: sourceFile,
-        target: targetFile,
-        source_sha256: sourceHash,
-        target_sha256: currentTargetHash,
-        status: "unmanaged"
-      });
-    }
-  }
-  return items;
-}
-
-async function rollbackFiles(backup: BackupMap): Promise<void> {
-  for (const [target, content] of backup.entries()) {
-    if (content === null) {
-      if (await fileExists(target)) await fs.rm(target, { force: true });
-      continue;
-    }
-    await ensureDir(path.dirname(target));
-    await fs.writeFile(target, content);
-  }
-}
-
-function summarizeParity(items: AssetManifestItem[]): ScaffoldManifest["parity_summary"] {
-  const byStatus = (status: AssetManifestItem["status"]) => items.filter((item) => item.status === status).length;
-  return {
-    match_count: byStatus("match"),
-    drift_count: byStatus("drift"),
-    missing_count: byStatus("missing"),
-    protected_count: byStatus("protected"),
-    updated_count: byStatus("updated"),
-    unmanaged_count: byStatus("unmanaged")
-  };
-}
-
-export async function runInit(
-  cwd: string,
-  options?: { ai?: SupportedAi; lang?: string; author?: string; preset?: string; script?: "sh" | "ps" }
-): Promise<{ installedAgentFiles: string[]; settingsPath: string }> {
-  const root = prodoPath(cwd);
-  const artifactDefs = await listArtifactDefinitions(cwd);
-  const artifactTypes = artifactDefs.map((item) => item.name);
-  const workflowCommands = buildWorkflowCommands(artifactTypes);
-  const prodoVersion = await readProdoVersion(cwd);
-  const localRepoTemplates = path.join(cwd, "templates");
-  const packagedTemplates = path.resolve(__dirname, "..", "templates");
-  const projectScaffoldTemplates = (await fileExists(localRepoTemplates)) ? localRepoTemplates : packagedTemplates;
-  const copiedAssets: Array<{ source: string; target: string; sha256: string }> = [];
-  const backup: BackupMap = new Map();
-  const previousManifest = await loadPreviousManifest(root);
-
-  await ensureDir(path.join(root, "briefs"));
-  await ensureDir(path.join(root, "schemas"));
-  await ensureDir(path.join(root, "prompts"));
-  await ensureDir(path.join(root, "commands"));
-  await ensureDir(path.join(root, "presets"));
-  await ensureDir(path.join(root, "templates"));
-  await ensureDir(path.join(root, "templates", "overrides"));
-  await ensureDir(path.join(root, "state"));
-  await ensureDir(path.join(root, "state", "context"));
-  for (const def of artifactDefs) {
-    await ensureDir(outputDirPath(cwd, def.name, def.output_dir));
-  }
-  await ensureDir(path.join(cwd, "product-docs", "reports"));
-  await writeFileIfMissing(
-    outputIndexPath(cwd),
-    `${JSON.stringify({ active: {}, history: {}, updated_at: new Date(0).toISOString() }, null, 2)}\n`
-  );
-
-  await writeFileIfMissing(briefPath(cwd), START_BRIEF_TEMPLATE);
-  await writeFileIfMissing(
-    path.join(root, "briefs", "normalized-brief.json"),
-    `${JSON.stringify(NORMALIZED_BRIEF_TEMPLATE, null, 2)}\n`
-  );
-  await writeFileIfMissing(path.join(root, "hooks.yml"), HOOKS_TEMPLATE);
-  await writeFileIfMissing(path.join(root, "prompts", "normalize.md"), `${NORMALIZE_PROMPT_TEMPLATE}\n`);
-  const scriptType = options?.script ?? (process.platform === "win32" ? "ps" : "sh");
-  await fs.writeFile(
-    path.join(root, "init-options.json"),
-    `${JSON.stringify({ ai: options?.ai ?? null, lang: options?.lang ?? "en", author: options?.author ?? null, preset: options?.preset ?? null, script: scriptType }, null, 2)}\n`,
-    "utf8"
-  );
-
-  await copyDirIfMissing(path.join(projectScaffoldTemplates, "artifacts"), path.join(root, "templates"), copiedAssets);
-  for (const artifact of artifactDefs) {
-    const markdownTemplatePath = path.join(root, "templates", `${artifact.name}.md`);
-    const templateHeadings =
-      (await fileExists(markdownTemplatePath))
-        ? extractRequiredHeadingsFromTemplate(await fs.readFile(markdownTemplatePath, "utf8"))
-        : [];
-    const schema = {
-      ...schemaTemplate(artifact.name),
-      x_required_headings: templateHeadings.length > 0 ? templateHeadings : artifact.required_headings
-    };
-    await writeFileIfMissing(path.join(root, "schemas", `${artifact.name}.yaml`), yaml.dump(schema));
-    await writeFileIfMissing(path.join(root, "prompts", `${artifact.name}.md`), `${promptTemplate(artifact.name, options?.lang ?? "en")}\n`);
-    await writeFileIfMissing(
-      path.join(root, "templates", templateFileName(artifact.name)),
-      `${artifactTemplateTemplate(artifact.name, options?.lang ?? "en")}\n`
-    );
-  }
-
-  await copyDirIfMissing(path.join(projectScaffoldTemplates, "commands"), path.join(root, "commands"), copiedAssets);
-  await refreshLegacyCommandTemplates(path.join(projectScaffoldTemplates, "commands"), path.join(root, "commands"));
-  for (const command of workflowCommands) {
-    await writeFileIfMissing(path.join(root, "commands", `${command.name}.md`), `${commandTemplate(command)}\n`);
-  }
-
-  await applyConfiguredPresets(cwd, root, prodoVersion, options?.preset);
-
-  const pairs: SourceTargetPair[] = [
-    {
-      sourceDir: path.join(projectScaffoldTemplates, "commands"),
-      targetDir: path.join(root, "commands")
-    },
-    {
-      sourceDir: path.join(projectScaffoldTemplates, "artifacts"),
-      targetDir: path.join(root, "templates")
-    }
-  ];
-
-  let parity: AssetManifestItem[] = [];
-  try {
-    parity = await buildAssetManifest(pairs, previousManifest, backup);
-  } catch (error) {
-    await rollbackFiles(backup);
-    throw error;
-  }
-
-  const installedAgentFiles = options?.ai ? await installAgentCommands(cwd, options.ai) : [];
-  const manifest: ScaffoldManifest = {
-    schema_version: "1.0",
-    generated_at: new Date().toISOString(),
-    prodo_version: prodoVersion,
-    copied_asset_count: copiedAssets.length,
-    copied_assets: copiedAssets,
-    asset_count: parity.length,
-    parity_summary: summarizeParity(parity),
-    assets: parity
-  };
-  await fs.writeFile(path.join(root, "scaffold-manifest.json"), `${JSON.stringify(manifest, null, 2)}\n`, "utf8");
-  await syncRegistry(cwd);
-  const settingsPath = await writeSettings(cwd, {
-    lang: (options?.lang ?? "en").trim() || "en",
-    ai: options?.ai,
-    author: (options?.author ?? "").trim() || undefined
-  });
-  return { installedAgentFiles, settingsPath };
-}
+import fs from "node:fs/promises";
+import path from "node:path";
+import { createHash } from "node:crypto";
+import yaml from "js-yaml";
+import { installAgentCommands, type SupportedAi } from "./agent-command-installer";
+import { listArtifactDefinitions } from "../core/artifact-registry";
+import { ensureDir, fileExists } from "../core/utils";
+import { briefPath, outputDirPath, outputIndexPath, prodoPath } from "../core/paths";
+import { applyConfiguredPresets } from "./preset-loader";
+import { syncRegistry } from "../core/registry";
+import { writeSettings } from "../core/settings";
+import { extractRequiredHeadingsFromTemplate } from "../core/template-resolver";
+import { buildWorkflowCommands } from "../core/workflow-commands";
+import {
+  NORMALIZED_BRIEF_TEMPLATE,
+  NORMALIZE_PROMPT_TEMPLATE,
+  START_BRIEF_TEMPLATE,
+  HOOKS_TEMPLATE,
+  artifactTemplateTemplate,
+  commandTemplate,
+  promptTemplate,
+  schemaTemplate
+} from "../core/templates";
+
+type AssetManifestItem = {
+  source: string;
+  target: string;
+  source_sha256: string;
+  target_sha256: string | null;
+  status: "match" | "drift" | "missing" | "protected" | "updated" | "unmanaged";
+};
+
+type ScaffoldManifest = {
+  schema_version: "1.0";
+  generated_at: string;
+  prodo_version: string;
+  copied_asset_count: number;
+  copied_assets: Array<{ source: string; target: string; sha256: string }>;
+  asset_count: number;
+  parity_summary: {
+    match_count: number;
+    drift_count: number;
+    missing_count: number;
+    protected_count: number;
+    updated_count: number;
+    unmanaged_count: number;
+  };
+  assets: AssetManifestItem[];
+};
+
+type SourceTargetPair = { sourceDir: string; targetDir: string };
+type BackupMap = Map<string, Buffer | null>;
+
+function templateFileName(artifactType: string): string {
+  if (artifactType === "workflow") return `${artifactType}.mmd`;
+  if (artifactType === "wireframe") return `${artifactType}.html`;
+  return `${artifactType}.md`;
+}
+
+async function writeFileIfMissing(filePath: string, content: string): Promise<void> {
+  if (await fileExists(filePath)) return;
+  await fs.writeFile(filePath, content, "utf8");
+}
+
+async function readProdoVersion(cwd: string): Promise<string> {
+  const candidates = [
+    path.join(cwd, "package.json"),
+    path.resolve(__dirname, "..", "..", "package.json")
+  ];
+  for (const candidate of candidates) {
+    if (!(await fileExists(candidate))) continue;
+    try {
+      const parsed = JSON.parse(await fs.readFile(candidate, "utf8")) as { version?: string };
+      if (typeof parsed.version === "string" && parsed.version.trim().length > 0) return parsed.version;
+    } catch {
+      // ignore and continue
+    }
+  }
+  return "0.0.0-dev";
+}
+
+async function fileSha256(filePath: string): Promise<string> {
+  const content = await fs.readFile(filePath);
+  return createHash("sha256").update(content).digest("hex");
+}
+
+async function listFilesRecursive(rootDir: string): Promise<string[]> {
+  if (!(await fileExists(rootDir))) return [];
+  const out: string[] = [];
+  const walk = async (current: string): Promise<void> => {
+    const entries = await fs.readdir(current, { withFileTypes: true });
+    for (const entry of entries) {
+      const full = path.join(current, entry.name);
+      if (entry.isDirectory()) {
+        await walk(full);
+      } else {
+        out.push(full);
+      }
+    }
+  };
+  await walk(rootDir);
+  return out;
+}
+
+async function loadPreviousManifest(root: string): Promise<ScaffoldManifest | null> {
+  const manifestPath = path.join(root, "scaffold-manifest.json");
+  if (!(await fileExists(manifestPath))) return null;
+  try {
+    const parsed = JSON.parse(await fs.readFile(manifestPath, "utf8")) as Partial<ScaffoldManifest>;
+    if (!Array.isArray(parsed.assets)) return null;
+    return {
+      schema_version: "1.0",
+      generated_at: parsed.generated_at ?? "",
+      prodo_version: parsed.prodo_version ?? "0.0.0-dev",
+      copied_asset_count: Number(parsed.copied_asset_count ?? 0),
+      copied_assets: Array.isArray(parsed.copied_assets) ? parsed.copied_assets : [],
+      asset_count: Number(parsed.asset_count ?? 0),
+      parity_summary: {
+        match_count: Number(parsed.parity_summary?.match_count ?? 0),
+        drift_count: Number(parsed.parity_summary?.drift_count ?? 0),
+        missing_count: Number(parsed.parity_summary?.missing_count ?? 0),
+        protected_count: Number(parsed.parity_summary?.protected_count ?? 0),
+        updated_count: Number(parsed.parity_summary?.updated_count ?? 0),
+        unmanaged_count: Number(parsed.parity_summary?.unmanaged_count ?? 0)
+      },
+      assets: parsed.assets as AssetManifestItem[]
+    };
+  } catch {
+    return null;
+  }
+}
+
+async function copyDirIfMissing(
+  sourceDir: string,
+  targetDir: string,
+  copiedAssets: Array<{ source: string; target: string; sha256: string }>
+): Promise<void> {
+  if (!(await fileExists(sourceDir))) return;
+  await ensureDir(targetDir);
+  const entries = await fs.readdir(sourceDir, { withFileTypes: true });
+  for (const entry of entries) {
+    const src = path.join(sourceDir, entry.name);
+    const dst = path.join(targetDir, entry.name);
+    if (entry.isDirectory()) {
+      await copyDirIfMissing(src, dst, copiedAssets);
+      continue;
+    }
+    if (await fileExists(dst)) continue;
+    await fs.copyFile(src, dst);
+    copiedAssets.push({
+      source: src,
+      target: dst,
+      sha256: await fileSha256(dst)
+    });
+  }
+}
+
+async function refreshLegacyCommandTemplates(sourceDir: string, targetDir: string): Promise<void> {
+  if (!(await fileExists(sourceDir)) || !(await fileExists(targetDir))) return;
+  const entries = await fs.readdir(sourceDir, { withFileTypes: true });
+  for (const entry of entries) {
+    if (!entry.isFile()) continue;
+    if (!entry.name.startsWith("prodo-") || !entry.name.endsWith(".md")) continue;
+    const src = path.join(sourceDir, entry.name);
+    const dst = path.join(targetDir, entry.name);
+    if (!(await fileExists(dst))) continue;
+    const existing = await fs.readFile(dst, "utf8");
+    const isLegacyRunMode = /run:\s*\n\s*action:\s*[^\n]+/m.test(existing) || /mode:\s*internal-runtime/m.test(existing);
+    if (!isLegacyRunMode) continue;
+    await fs.copyFile(src, dst);
+  }
+}
+
+async function buildAssetManifest(
+  pairs: SourceTargetPair[],
+  previous: ScaffoldManifest | null,
+  backup: BackupMap
+): Promise<AssetManifestItem[]> {
+  const previousByTarget = new Map<string, AssetManifestItem>();
+  for (const item of previous?.assets ?? []) {
+    previousByTarget.set(path.resolve(item.target), item);
+  }
+
+  const items: AssetManifestItem[] = [];
+  for (const pair of pairs) {
+    const sourceFiles = await listFilesRecursive(pair.sourceDir);
+    for (const sourceFile of sourceFiles) {
+      const relative = path.relative(pair.sourceDir, sourceFile);
+      const targetFile = path.join(pair.targetDir, relative);
+      const resolvedTarget = path.resolve(targetFile);
+      const sourceHash = await fileSha256(sourceFile);
+      const targetExists = await fileExists(targetFile);
+
+      if (!targetExists) {
+        await ensureDir(path.dirname(targetFile));
+        backup.set(resolvedTarget, null);
+        await fs.copyFile(sourceFile, targetFile);
+        items.push({
+          source: sourceFile,
+          target: targetFile,
+          source_sha256: sourceHash,
+          target_sha256: await fileSha256(targetFile),
+          status: "missing"
+        });
+        continue;
+      }
+
+      const currentTargetHash = await fileSha256(targetFile);
+      const prev = previousByTarget.get(resolvedTarget);
+      const prevTargetHash = prev?.target_sha256 ?? null;
+      const prevSourceHash = prev?.source_sha256 ?? null;
+
+      if (currentTargetHash === sourceHash) {
+        items.push({
+          source: sourceFile,
+          target: targetFile,
+          source_sha256: sourceHash,
+          target_sha256: currentTargetHash,
+          status: "match"
+        });
+        continue;
+      }
+
+      if (prev && prevTargetHash && prevSourceHash && currentTargetHash === prevTargetHash && prevSourceHash !== sourceHash) {
+        if (!backup.has(resolvedTarget)) {
+          backup.set(resolvedTarget, await fs.readFile(targetFile));
+        }
+        await fs.copyFile(sourceFile, targetFile);
+        items.push({
+          source: sourceFile,
+          target: targetFile,
+          source_sha256: sourceHash,
+          target_sha256: await fileSha256(targetFile),
+          status: "updated"
+        });
+        continue;
+      }
+
+      if (prev) {
+        items.push({
+          source: sourceFile,
+          target: targetFile,
+          source_sha256: sourceHash,
+          target_sha256: currentTargetHash,
+          status: "protected"
+        });
+        continue;
+      }
+
+      items.push({
+        source: sourceFile,
+        target: targetFile,
+        source_sha256: sourceHash,
+        target_sha256: currentTargetHash,
+        status: "unmanaged"
+      });
+    }
+  }
+  return items;
+}
+
+async function rollbackFiles(backup: BackupMap): Promise<void> {
+  for (const [target, content] of backup.entries()) {
+    if (content === null) {
+      if (await fileExists(target)) await fs.rm(target, { force: true });
+      continue;
+    }
+    await ensureDir(path.dirname(target));
+    await fs.writeFile(target, content);
+  }
+}
+
+function summarizeParity(items: AssetManifestItem[]): ScaffoldManifest["parity_summary"] {
+  const byStatus = (status: AssetManifestItem["status"]) => items.filter((item) => item.status === status).length;
+  return {
+    match_count: byStatus("match"),
+    drift_count: byStatus("drift"),
+    missing_count: byStatus("missing"),
+    protected_count: byStatus("protected"),
+    updated_count: byStatus("updated"),
+    unmanaged_count: byStatus("unmanaged")
+  };
+}
+
+export async function runInit(
+  cwd: string,
+  options?: { ai?: SupportedAi; lang?: string; author?: string; preset?: string; script?: "sh" | "ps"; provider?: string }
+): Promise<{ installedAgentFiles: string[]; settingsPath: string }> {
+  const root = prodoPath(cwd);
+  const artifactDefs = await listArtifactDefinitions(cwd);
+  const artifactTypes = artifactDefs.map((item) => item.name);
+  const workflowCommands = buildWorkflowCommands(artifactTypes);
+  const prodoVersion = await readProdoVersion(cwd);
+  const localRepoTemplates = path.join(cwd, "templates");
+  const packagedTemplates = path.resolve(__dirname, "..", "..", "templates");
+  const projectScaffoldTemplates = (await fileExists(localRepoTemplates)) ? localRepoTemplates : packagedTemplates;
+  const copiedAssets: Array<{ source: string; target: string; sha256: string }> = [];
+  const backup: BackupMap = new Map();
+  const previousManifest = await loadPreviousManifest(root);
+
+  await ensureDir(path.join(root, "briefs"));
+  await ensureDir(path.join(root, "schemas"));
+  await ensureDir(path.join(root, "prompts"));
+  await ensureDir(path.join(root, "commands"));
+  await ensureDir(path.join(root, "presets"));
+  await ensureDir(path.join(root, "templates"));
+  await ensureDir(path.join(root, "templates", "overrides"));
+  await ensureDir(path.join(root, "state"));
+  await ensureDir(path.join(root, "state", "context"));
+  for (const def of artifactDefs) {
+    await ensureDir(outputDirPath(cwd, def.name, def.output_dir));
+  }
+  await ensureDir(path.join(cwd, "product-docs", "reports"));
+  await writeFileIfMissing(
+    outputIndexPath(cwd),
+    `${JSON.stringify({ active: {}, history: {}, updated_at: new Date(0).toISOString() }, null, 2)}\n`
+  );
+
+  await writeFileIfMissing(briefPath(cwd), START_BRIEF_TEMPLATE);
+  await writeFileIfMissing(
+    path.join(root, "briefs", "normalized-brief.json"),
+    `${JSON.stringify(NORMALIZED_BRIEF_TEMPLATE, null, 2)}\n`
+  );
+  await writeFileIfMissing(path.join(root, "hooks.yml"), HOOKS_TEMPLATE);
+  await writeFileIfMissing(path.join(root, "prompts", "normalize.md"), `${NORMALIZE_PROMPT_TEMPLATE}\n`);
+  const scriptType = options?.script ?? (process.platform === "win32" ? "ps" : "sh");
+  await fs.writeFile(
+    path.join(root, "init-options.json"),
+    `${JSON.stringify({ ai: options?.ai ?? null, lang: options?.lang ?? "en", author: options?.author ?? null, preset: options?.preset ?? null, script: scriptType }, null, 2)}\n`,
+    "utf8"
+  );
+
+  await copyDirIfMissing(path.join(projectScaffoldTemplates, "artifacts"), path.join(root, "templates"), copiedAssets);
+  for (const artifact of artifactDefs) {
+    const markdownTemplatePath = path.join(root, "templates", `${artifact.name}.md`);
+    const templateHeadings =
+      (await fileExists(markdownTemplatePath))
+        ? extractRequiredHeadingsFromTemplate(await fs.readFile(markdownTemplatePath, "utf8"))
+        : [];
+    const schema = {
+      ...schemaTemplate(artifact.name),
+      x_required_headings: templateHeadings.length > 0 ? templateHeadings : artifact.required_headings
+    };
+    await writeFileIfMissing(path.join(root, "schemas", `${artifact.name}.yaml`), yaml.dump(schema));
+    await writeFileIfMissing(path.join(root, "prompts", `${artifact.name}.md`), `${promptTemplate(artifact.name, options?.lang ?? "en")}\n`);
+    await writeFileIfMissing(
+      path.join(root, "templates", templateFileName(artifact.name)),
+      `${artifactTemplateTemplate(artifact.name, options?.lang ?? "en")}\n`
+    );
+  }
+
+  await copyDirIfMissing(path.join(projectScaffoldTemplates, "commands"), path.join(root, "commands"), copiedAssets);
+  await refreshLegacyCommandTemplates(path.join(projectScaffoldTemplates, "commands"), path.join(root, "commands"));
+  for (const command of workflowCommands) {
+    await writeFileIfMissing(path.join(root, "commands", `${command.name}.md`), `${commandTemplate(command)}\n`);
+  }
+
+  await applyConfiguredPresets(cwd, root, prodoVersion, options?.preset);
+
+  const pairs: SourceTargetPair[] = [
+    {
+      sourceDir: path.join(projectScaffoldTemplates, "commands"),
+      targetDir: path.join(root, "commands")
+    },
+    {
+      sourceDir: path.join(projectScaffoldTemplates, "artifacts"),
+      targetDir: path.join(root, "templates")
+    }
+  ];
+
+  let parity: AssetManifestItem[] = [];
+  try {
+    parity = await buildAssetManifest(pairs, previousManifest, backup);
+  } catch (error) {
+    await rollbackFiles(backup);
+    throw error;
+  }
+
+  const installedAgentFiles = options?.ai ? await installAgentCommands(cwd, options.ai) : [];
+  const manifest: ScaffoldManifest = {
+    schema_version: "1.0",
+    generated_at: new Date().toISOString(),
+    prodo_version: prodoVersion,
+    copied_asset_count: copiedAssets.length,
+    copied_assets: copiedAssets,
+    asset_count: parity.length,
+    parity_summary: summarizeParity(parity),
+    assets: parity
+  };
+  await fs.writeFile(path.join(root, "scaffold-manifest.json"), `${JSON.stringify(manifest, null, 2)}\n`, "utf8");
+  await syncRegistry(cwd);
+  const settingsPath = await writeSettings(cwd, {
+    lang: (options?.lang ?? "en").trim() || "en",
+    ai: options?.ai,
+    author: (options?.author ?? "").trim() || undefined,
+    provider: options?.provider
+  });
+  return { installedAgentFiles, settingsPath };
+}