@seqyuan/annovibe 0.8.111 → 0.8.114

package/.next/server/chunks/6429.js

@@ -175,7 +175,7 @@ ${b}
 
 Continue executing from where you left off.`,display:!0},{triggerTurn:!0})):"Delete plan file"===c&&o(g.cwd)}}}),a.on("turn_start",async(a,b)=>{u(b.sessionManager.getSessionId()),c=!1,s()}),a.on("turn_end",async(a,b)=>{if(e&&0!==p.length&&!c){let a=p.find(a=>!a.completed);a&&(a.completed=!0,s())}})}},39773:(a,b,c)=>{"use strict";c.d(b,{X:()=>g,w:()=>f});var d=c(55511);let e=new Map;function f(a){let b=(0,d.randomUUID)().replace(/-/g,"").slice(0,24);return e.set(b,{...a,token:b,expiresAt:Date.now()+18e5}),b}function g(a){let b=e.get(a);return b?Date.now()>b.expiresAt?(e.delete(a),null):b:null}setInterval(()=>{let a=Date.now();for(let[b,c]of e)a>c.expiresAt&&e.delete(b)},3e5)},41761:(a,b,c)=>{"use strict";c.d(b,{C1:()=>e,lA:()=>d});let d="subagent",e=["bash","read","edit","write","grep","find","ls"];[...e],[...e]},44036:(a,b,c)=>{"use strict";c.d(b,{FJ:()=>g,R4:()=>h,X8:()=>f});let d="<workbench-guidelines>\nAnnoVibe Workbench is active. Use it for reproducible R/Python analysis plots, data visualizations, and warm-runtime analysis work.\n\nTool routing:\n- Use `kernel_plot_render` for one-shot iterative plot previews — images auto-render inline in chat without saving files. Call `render_plot()` to mark the preview target. ggplot2 (R) and plt.show() (Python) are auto-captured as convenience.\n- Use `kernel_plot_inspect` after resuming a workbench session, after suspected kernel restart, or whenever you are unsure whether objects like `adata`/`seurat_obj` are still live in memory.\n- Use `kernel_plot_run` when plots depend on data already loaded in warm kernel memory, or when saving final artifacts to disk.\n- Use `runtime: \"kernel-lite\"` in `kernel_plot_run` when variables or loaded data should persist across turns.\n- Use `runtime: \"worker\"` for one-shot scripts that should be isolated.\n- Do not run Rscript/python plotting through `bash` unless the workbench tools are unavailable.\n- Do not use bash with `conda run python`, `Rscript`, or direct interpreter calls for analysis code — always prefer `kernel_plot_run`.\n\nkernel-lite memory rules — CRITICAL:\n- Packages imported (import scanpy, library(Seurat), etc.) and variables assigned in one kernel_plot_run call persist while the same kernel-lite runtime is alive. Do NOT repeat imports in every call. Import each package only once, in the first call that needs it.\n- Large data objects loaded via sc.read(), readRDS(), qread(), pd.read_csv(), etc. stay in memory while the warm kernel is alive. Before calling any load function, check whether the object already exists:\n  Python: `if 'adata' not in globals(): adata = sc.read(path)`\n  R: `if (!exists('seurat_obj')) seurat_obj <- readRDS(path)`\n  Print a brief note when reusing in-memory data vs loading fresh.\n- Do NOT put sc.read() / readRDS() / qread() at the top of every call. This reloads multi-GB files needlessly and is the #1 performance mistake in workbench sessions.\n- After browser refreshes, model switches, compaction, or a resumed workbench session, treat prior history as inferred only: first use `kernel_plot_inspect` or an explicit existence check to see whether required objects still exist, then reload only missing objects from the known source path.\n\nWorkbench artifact rules:\n- Save every output under `WARMPLOT_OUTPUT_DIR` or `PI_KERNEL_PLOT_OUTPUT_DIR`.\n- Create a primary PNG/JPEG/WebP preview for chat display whenever a figure is produced, not PDF-only output. Keep the preview reasonably sized so it can be embedded inline.\n- If a publication-quality PDF/SVG is needed, save it in addition to the preview image.\n- Name the primary preview clearly, for example `00_preview.png`, so it is easy to identify.\n- When the user asks to save final outputs to a specific project directory, use that directory (not WARMPLOT_OUTPUT_DIR) for the final artifacts.\n\nChat display rules:\n- The web chat renders returned image artifacts inline. Do not say that images cannot be displayed.\n- Do not use `open`, `xdg-open`, or desktop viewers to show plots.\n- After generating any plot, make the chat response displayable by including the PNG/JPEG/WebP preview path in the final answer or by returning it as a tool image artifact. Do not mention only PDF paths when an image preview exists.\n- When using shell tools for plotting, still save a PNG/JPEG/WebP preview and include that preview path in the final answer; avoid a final answer that only says a desktop window was opened.\n- When the user asks to show an existing PNG/JPEG/WebP file, use `read` on that image path; the UI will display the image even if the model cannot inspect pixels.\n- If only a PDF exists and the user asks to see it in chat, generate a PNG preview with `kernel_plot_run` or report the PDF path only if conversion is not practical.\n- After a successful plot, summarize the result briefly and include both preview image paths and any publication-quality PDF/SVG paths.\n</workbench-guidelines>",e=/\n?\s*(?:<plot-mode-guidelines>[\s\S]*?<\/plot-mode-guidelines>|<workbench-guidelines>[\s\S]*?<\/workbench-guidelines>)\s*/g;function f(a){return a.replace(e,"\n").replace(/\n{3,}/g,"\n\n").trim()}function g(a){return a.includes("<plot-mode-guidelines>")||a.includes("<workbench-guidelines>")?a:a.trim()?`${a.trimEnd()}
 
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@@ -191,7 +191,18 @@ You are responding to a user via 企业微信 (WeCom) bot. Follow these rules:
 3. **Be concise.** WeCom messages have limited display width. Keep replies short and scannable.
 4. **For files/diagrams:** Save output files to the project directory and tell the user the file path. Do NOT attempt to inline images or charts.
 5. **Respond in the user's language.** If the user sends Chinese, reply in Chinese.
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+- If freshness is inferred or a required object is not listed, first inspect/check existence before loading.
+- Cheap package imports are acceptable after a resume if needed, but avoid repeating boilerplate in every call.
+- For large objects, first check existence: Python: if 'name' not in globals() — R: if (!exists('name')).
+- Do NOT call sc.read() / readRDS() / qread() blindly at the top of every call.
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package/.next/server/middleware-build-manifest.js

@@ -1 +1 @@
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+globalThis.__BUILD_MANIFEST={polyfillFiles:["static/chunks/polyfills-42372ed130431b0a.js"],devFiles:[],lowPriorityFiles:["static/zNTq4wuwYdF4hI5SqkDDt/_buildManifest.js","static/zNTq4wuwYdF4hI5SqkDDt/_ssgManifest.js"],rootMainFiles:["static/chunks/webpack-b13282f72690ef5e.js","static/chunks/4bd1b696-e356ca5ba0218e27.js","static/chunks/3794-123fdf632563f469.js","static/chunks/main-app-8d81a93b58bb990f.js"],rootMainFilesTree:{},pages:{"/_app":[]}};