@sequenceholdings/pipeline-spec 0.3.0 → 0.3.1

package/README.md

@@ -113,6 +113,42 @@ validation, planning, deployment, migrations, and ORM repinning use the same
 discovery rules. `seq-studio pipeline init` writes into the first configured
 stage directory; without config it keeps writing to the package root.
 
+For repositories that also contain applications, add an explicit source package
+without changing the release unit or moving its root:
+
+```yaml
+schema_version: 1
+stage_directories: [config/stages]
+source_paths:
+  - src
+  - lookup-data
+  - requirements.txt
+```
+
+`source_paths` selects literal files or complete directories, relative to the
+existing package root. Globs, traversal, symlinks, duplicate paths and missing
+or empty selections are rejected. Without this field, the complete root remains
+the source package. This capability requires a server and SDK release containing
+source-package support; older releases reject the new config field.
+
+The platform always includes configured stage definitions, `pipeline.config.yml`,
+`pipeline.yml`, `external-assets.json`, `orm-contracts.json`, and the `schemas/`,
+`documentation/`, `migrations/` and `extra-resources/` directories when present.
+Selection cannot silently remove a workflow, contract, migration or extra job.
+Declared entrypoints, operation entrypoints, decoders and local file references
+in extra resources must be present in the package. Include whole runtime module
+directories and their data, dependency manifests and lockfiles: arbitrary Python
+imports, dynamically computed paths and remote workspace files cannot be inferred
+from stage YAML. Validate and test the selected package before review.
+
+Git-backed planning reads this configuration from the authorized immutable
+commit, before accounting for selected source bytes. The existing file-count,
+per-file, total snapshot and Git-fetch limits still apply; selection does not
+remove the bounded whole-commit Git fetch. The plan retains the same repository,
+root and commit identity. Cross-environment snapshots hash the selected bytes and
+the config together; deploy and rollback use those reviewed snapshots. Historical
+full-root snapshots retain their existing behavior.
+
 A stage specification describes one deployable unit and its inputs, outputs,
 runtime, ownership, and environment policy. For example:
 

package/dist/index.d.ts

@@ -11,7 +11,7 @@ export { LAKEBASE_CDF_ENVELOPE_COLUMNS, TRANSFORMATION_ENGINES, WRITE_PATTERNS,
 export { PUBLIC_VIEW_ACCESS, SYNC_MODES, ormBindingSchema, publicViewAccessSchema, projectionSchema, satisfiesSchema, syncModeSchema, type OrmBinding, type PublicViewAccess, type Projection, type SatisfiesBinding, type SyncMode, } from './bodies/serving.js';
 export { CRITICALITIES, REMEDIATION_POSTURES, alertsSchema, criticalitySchema, deployTargetSchema, ingestionStageSchema, remediationPostureSchema, servingStageSchema, slosSchema, stageIdSchema, stageSpecSchema, transformationStageSchema, type Alerts, type Criticality, type IngestionStageSpec, type RemediationPosture, type ServingStageSpec, type Slos, type StageSpec, type StageSpecInput, type TransformationStageSpec, } from './envelope.js';
 export { flattenSpecIssues, formatSpecIssues, type SpecIssue } from './issues.js';
-export { loadSpecDirectory, loadPipelineConfig, assertStageDirectoryContained, parseSpecSources, parseStageFile, type LoadedPipeline, type PipelineConfig, type SpecSource, } from './loader.js';
+export { loadSpecDirectory, loadPipelineConfig, parsePipelineConfig, assertStageDirectoryContained, parseSpecSources, parseStageFile, type LoadedPipeline, type PipelineConfig, type SpecSource, } from './loader.js';
 export { canonicalJson, computeContractHash, computeSpecHash, contractSurface } from './hash.js';
 export { collectBindingGaps, collectPipelineBindingGaps, type BindingGap, } from './binding-gaps.js';
 export { resolveSpec, targetFactsSchema, transformationOutputCatalog, type ResolvedBindings, type ResolvedIdentity, type ResolvedNames, type ResolvedProvenance, type ResolvedSpec, type SpecProvenanceInput, type TargetFacts, type TargetFactsInput, } from './resolve.js';
@@ -27,4 +27,5 @@ export { analyzeMigrationContracts, type MigrationParticipantContracts, type Mig
 export * from './snapshot-transport.js';
 export { consumedReferences, triggerTargets } from './graph-references.js';
 export { ormAliasSchema, refineServingAliases, type OrmAlias } from './orm-aliases.js';
+export { selectPipelineSourcePaths, assertPipelineSourceDependencies } from './source-package.js';
 //# sourceMappingURL=index.d.ts.map

package/dist/index.d.ts.map

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+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,sBAAsB,EAAE,oBAAoB,EAAE,sBAAsB,EAAE,KAAK,gBAAgB,EAAE,MAAM,eAAe,CAAA;AAE3H,OAAO,EACL,yBAAyB,EACzB,oBAAoB,EACpB,qBAAqB,EACrB,uBAAuB,EACvB,2BAA2B,EAC3B,kBAAkB,EAClB,kBAAkB,EAClB,mBAAmB,EACnB,yBAAyB,EACzB,oBAAoB,EACpB,oBAAoB,EACpB,mBAAmB,EACnB,oBAAoB,EACpB,uBAAuB,EACvB,iBAAiB,EACjB,wBAAwB,EACxB,oBAAoB,EACpB,iBAAiB,EACjB,gBAAgB,EAChB,mBAAmB,EACnB,gBAAgB,EAChB,oBAAoB,EACpB,mBAAmB,GACpB,MAAM,gBAAgB,CAAA;AAEvB,OAAO,EACL,sBAAsB,EACtB,mBAAmB,EACnB,mBAAmB,EACnB,KAAK,mBAAmB,GACzB,MAAM,aAAa,CAAA;AAEpB,OAAO,EACL,oBAAoB,EACpB,4BAA4B,EAC5B,KAAK,iBAAiB,GACvB,MAAM,kBAAkB,CAAA;AAEzB,OAAO,EACL,oBAAoB,EACpB,gBAAgB,EAChB,gBAAgB,EAChB,kBAAkB,EAClB,oBAAoB,EACpB,WAAW,EACX,oBAAoB,EACpB,kBAAkB,EAClB,iBAAiB,EACjB,KAAK,aAAa,EAClB,KAAK,aAAa,EAClB,KAAK,eAAe,EACpB,KAAK,YAAY,GAClB,MAAM,YAAY,CAAA;AAEnB,OAAO,EACL,sBAAsB,EACtB,eAAe,EACf,YAAY,EACZ,kBAAkB,EAClB,gBAAgB,EAChB,WAAW,EACX,qBAAqB,EACrB,kBAAkB,EAClB,sBAAsB,EACtB,eAAe,EACf,KAAK,MAAM,EACX,KAAK,WAAW,EAChB,KAAK,SAAS,EACd,KAAK,YAAY,EACjB,KAAK,eAAe,EACpB,KAAK,SAAS,GACf,MAAM,cAAc,CAAA;AAErB,OAAO,EACL,oBAAoB,EACpB,qBAAqB,EACrB,wBAAwB,EACxB,KAAK,cAAc,GACpB,MAAM,sBAAsB,CAAA;AAE7B,OAAO,EACL,sBAAsB,EACtB,yBAAyB,EACzB,mBAAmB,EACnB,oBAAoB,EACpB,qBAAqB,EACrB,eAAe,EACf,qBAAqB,EACrB,uBAAuB,EACvB,KAAK,mBAAmB,EACxB,KAAK,cAAc,EACnB,KAAK,eAAe,EACpB,KAAK,mBAAmB,EACxB,KAAK,aAAa,EAClB,KAAK,eAAe,EACpB,KAAK,qBAAqB,GAC3B,MAAM,iBAAiB,CAAA;AAExB,OAAO,EACL,+BAA+B,EAC/B,YAAY,EACZ,kBAAkB,EAClB,uBAAuB,EACvB,2BAA2B,EAC3B,qBAAqB,EACrB,cAAc,EACd,YAAY,EACZ,eAAe,EACf,cAAc,EACd,UAAU,EACV,cAAc,EACd,sBAAsB,EACtB,uBAAuB,EACvB,6BAA6B,EAC7B,0BAA0B,EAC1B,aAAa,EACb,iBAAiB,EACjB,sBAAsB,EACtB,cAAc,EACd,kBAAkB,EAClB,kBAAkB,EAClB,iBAAiB,EACjB,mBAAmB,EACnB,YAAY,EACZ,KAAK,UAAU,EACf,KAAK,QAAQ,EACb,KAAK,gBAAgB,EACrB,KAAK,oBAAoB,EACzB,KAAK,YAAY,EACjB,KAAK,YAAY,GAClB,MAAM,uBAAuB,CAAA;AAE9B,OAAO,EACL,6BAA6B,EAC7B,sBAAsB,EACtB,cAAc,EACd,kBAAkB,EAClB,qBAAqB,EACrB,0BAA0B,EAC1B,yBAAyB,EACzB,0BAA0B,EAC1B,kCAAkC,EAClC,mCAAmC,EACnC,2BAA2B,EAC3B,kBAAkB,EAClB,gBAAgB,EAChB,KAAK,gBAAgB,EACrB,KAAK,UAAU,EACf,KAAK,oBAAoB,EACzB,KAAK,mBAAmB,EACxB,KAAK,oBAAoB,EACzB,KAAK,4BAA4B,EACjC,KAAK,6BAA6B,EAClC,KAAK,qBAAqB,EAC1B,KAAK,YAAY,GAClB,MAAM,4BAA4B,CAAA;AAEnC,OAAO,EACL,kBAAkB,EAClB,UAAU,EACV,gBAAgB,EAChB,sBAAsB,EACtB,gBAAgB,EAChB,eAAe,EACf,cAAc,EACd,KAAK,UAAU,EACf,KAAK,gBAAgB,EACrB,KAAK,UAAU,EACf,KAAK,gBAAgB,EACrB,KAAK,QAAQ,GACd,MAAM,qBAAqB,CAAA;AAE5B,OAAO,EACL,aAAa,EACb,oBAAoB,EACpB,YAAY,EACZ,iBAAiB,EACjB,kBAAkB,EAClB,oBAAoB,EACpB,wBAAwB,EACxB,kBAAkB,EAClB,UAAU,EACV,aAAa,EACb,eAAe,EACf,yBAAyB,EACzB,KAAK,MAAM,EACX,KAAK,WAAW,EAChB,KAAK,kBAAkB,EACvB,KAAK,kBAAkB,EACvB,KAAK,gBAAgB,EACrB,KAAK,IAAI,EACT,KAAK,SAAS,EACd,KAAK,cAAc,EACnB,KAAK,uBAAuB,GAC7B,MAAM,eAAe,CAAA;AAEtB,OAAO,EAAE,iBAAiB,EAAE,gBAAgB,EAAE,KAAK,SAAS,EAAE,MAAM,aAAa,CAAA;AAEjF,OAAO,EACL,iBAAiB,EACjB,kBAAkB,EAClB,mBAAmB,EACnB,6BAA6B,EAC7B,gBAAgB,EAChB,cAAc,EACd,KAAK,cAAc,EACnB,KAAK,cAAc,EACnB,KAAK,UAAU,GAChB,MAAM,aAAa,CAAA;AAEpB,OAAO,EAAE,aAAa,EAAE,mBAAmB,EAAE,eAAe,EAAE,eAAe,EAAE,MAAM,WAAW,CAAA;AAEhG,OAAO,EACL,kBAAkB,EAClB,0BAA0B,EAC1B,KAAK,UAAU,GAChB,MAAM,mBAAmB,CAAA;AAE1B,OAAO,EACL,WAAW,EACX,iBAAiB,EACjB,2BAA2B,EAC3B,KAAK,gBAAgB,EACrB,KAAK,gBAAgB,EACrB,KAAK,aAAa,EAClB,KAAK,kBAAkB,EACvB,KAAK,YAAY,EACjB,KAAK,mBAAmB,EACxB,KAAK,WAAW,EAChB,KAAK,gBAAgB,GACtB,MAAM,cAAc,CAAA;AAErB,OAAO,EACL,2BAA2B,EAC3B,kBAAkB,EAClB,KAAK,oBAAoB,EACzB,KAAK,wBAAwB,GAC9B,MAAM,oBAAoB,CAAA;AAE3B,OAAO,EAAE,mCAAmC,EAAE,MAAM,4BAA4B,CAAA;AAEhF,OAAO,EACL,2BAA2B,EAC3B,gCAAgC,EAChC,qBAAqB,EACrB,wBAAwB,EACxB,kCAAkC,EAClC,KAAK,kBAAkB,EACvB,KAAK,mBAAmB,EACxB,KAAK,uBAAuB,EAC5B,KAAK,4BAA4B,GAClC,MAAM,oBAAoB,CAAA;AAE3B,OAAO,EACL,qBAAqB,EACrB,aAAa,EACb,KAAK,cAAc,EACnB,KAAK,kBAAkB,EACvB,KAAK,sBAAsB,EAC3B,KAAK,YAAY,EACjB,KAAK,kBAAkB,GACxB,MAAM,WAAW,CAAA;AAElB,OAAO,EACL,mBAAmB,EACnB,0BAA0B,EAC1B,iBAAiB,EACjB,sBAAsB,EACtB,KAAK,oBAAoB,EACzB,KAAK,YAAY,EACjB,KAAK,gBAAgB,EACrB,KAAK,qBAAqB,EAC1B,KAAK,wBAAwB,GAC9B,MAAM,YAAY,CAAA;AAEnB,OAAO,EACL,4BAA4B,EAC5B,0BAA0B,EAC1B,iBAAiB,EACjB,WAAW,EACX,KAAK,kBAAkB,EACvB,KAAK,wBAAwB,EAC7B,KAAK,0BAA0B,GAChC,MAAM,oCAAoC,CAAA;AAE3C,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAA;AAEnD,OAAO,EACL,oBAAoB,EACpB,sBAAsB,EACtB,uBAAuB,EACvB,4BAA4B,EAC5B,oBAAoB,EACpB,kBAAkB,EAClB,wBAAwB,EACxB,wBAAwB,EACxB,KAAK,iBAAiB,EACtB,KAAK,sBAAsB,EAC3B,KAAK,cAAc,EACnB,KAAK,gBAAgB,GACtB,MAAM,0BAA0B,CAAA;AACjC,OAAO,EACL,yBAAyB,EACzB,KAAK,6BAA6B,EAClC,KAAK,qBAAqB,EAC1B,KAAK,uBAAuB,GAC7B,MAAM,2BAA2B,CAAA;AAElC,cAAc,yBAAyB,CAAA;AACvC,OAAO,EAAE,kBAAkB,EAAE,cAAc,EAAE,MAAM,uBAAuB,CAAA;AAE1E,OAAO,EAAE,cAAc,EAAE,oBAAoB,EAAE,KAAK,QAAQ,EAAE,MAAM,kBAAkB,CAAA;AAEtF,OAAO,EAAE,yBAAyB,EAAE,gCAAgC,EAAE,MAAM,qBAAqB,CAAA"}

package/dist/index.js

@@ -11,7 +11,7 @@ export { LAKEBASE_CDF_ENVELOPE_COLUMNS, TRANSFORMATION_ENGINES, WRITE_PATTERNS,
 export { PUBLIC_VIEW_ACCESS, SYNC_MODES, ormBindingSchema, publicViewAccessSchema, projectionSchema, satisfiesSchema, syncModeSchema, } from './bodies/serving.js';
 export { CRITICALITIES, REMEDIATION_POSTURES, alertsSchema, criticalitySchema, deployTargetSchema, ingestionStageSchema, remediationPostureSchema, servingStageSchema, slosSchema, stageIdSchema, stageSpecSchema, transformationStageSchema, } from './envelope.js';
 export { flattenSpecIssues, formatSpecIssues } from './issues.js';
-export { loadSpecDirectory, loadPipelineConfig, assertStageDirectoryContained, parseSpecSources, parseStageFile, } from './loader.js';
+export { loadSpecDirectory, loadPipelineConfig, parsePipelineConfig, assertStageDirectoryContained, parseSpecSources, parseStageFile, } from './loader.js';
 export { canonicalJson, computeContractHash, computeSpecHash, contractSurface } from './hash.js';
 export { collectBindingGaps, collectPipelineBindingGaps, } from './binding-gaps.js';
 export { resolveSpec, targetFactsSchema, transformationOutputCatalog, } from './resolve.js';
@@ -27,4 +27,5 @@ export { analyzeMigrationContracts, } from './migrations/contracts.js';
 export * from './snapshot-transport.js';
 export { consumedReferences, triggerTargets } from './graph-references.js';
 export { ormAliasSchema, refineServingAliases } from './orm-aliases.js';
+export { selectPipelineSourcePaths, assertPipelineSourceDependencies } from './source-package.js';
 //# sourceMappingURL=index.js.map

package/dist/index.js.map

@@ -1 +1 @@
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package/dist/loader.d.ts

@@ -35,11 +35,14 @@ export interface LoadedPipeline {
 export interface PipelineConfig {
     readonly schema_version: 1;
     readonly stage_directories: readonly string[];
+    /** Literal package-relative files/directories; omitted retains the complete source root. */
+    readonly source_paths?: readonly string[];
 }
 export declare function loadPipelineConfig({ dir, allowMissingRoot }: {
     dir: string;
     allowMissingRoot?: boolean;
 }): Promise<PipelineConfig>;
+export declare function parsePipelineConfig(contents: string): PipelineConfig;
 export declare function assertStageDirectoryContained({ root, directory }: {
     root: string;
     directory: string;

package/dist/loader.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"loader.d.ts","sourceRoot":"","sources":["../src/loader.ts"],"names":[],"mappings":"AAiBA,OAAO,EAIL,KAAK,SAAS,EAEf,MAAM,cAAc,CAAA;AACrB,OAAO,EAAmB,KAAK,SAAS,EAAE,MAAM,eAAe,CAAA;AAE/D,OAAO,EAA6F,KAAK,iBAAiB,EAAE,MAAM,0BAA0B,CAAA;AAE5J;;;;;;;;;;;;;;;;;;GAkBG;AAEH,MAAM,WAAW,UAAU;IACzB,kGAAkG;IAClG,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAA;IACrB,QAAQ,CAAC,QAAQ,EAAE,MAAM,CAAA;CAC1B;AAED,MAAM,WAAW,cAAc;IAC7B,QAAQ,CAAC,MAAM,EAAE,SAAS,SAAS,EAAE,CAAA;IACrC,sDAAsD;IACtD,QAAQ,CAAC,OAAO,EAAE,QAAQ,CAAC,MAAM,CAAC,MAAM,EAAE,SAAS,CAAC,CAAC,CAAA;IACrD,QAAQ,CAAC,KAAK,EAAE,SAAS,MAAM,EAAE,CAAA;IACjC,QAAQ,CAAC,UAAU,CAAC,EAAE,SAAS,iBAAiB,EAAE,CAAA;CACnD;AAED,MAAM,WAAW,cAAc;IAC7B,QAAQ,CAAC,cAAc,EAAE,CAAC,CAAA;IAC1B,QAAQ,CAAC,iBAAiB,EAAE,SAAS,MAAM,EAAE,CAAA;IAC7C,4FAA4F;IAC5F,QAAQ,CAAC,YAAY,CAAC,EAAE,SAAS,MAAM,EAAE,CAAA;CAC1C;AAED,wBAAsB,kBAAkB,CAAC,EAAE,GAAG,EAAE,gBAAwB,EAAE,EAAE;IAC1E,GAAG,EAAE,MAAM,CAAA;IACX,gBAAgB,CAAC,EAAE,OAAO,CAAA;CAC3B,GAAG,OAAO,CAAC,cAAc,CAAC,CA2B1B;AAQD,wBAAgB,mBAAmB,CAAC,QAAQ,EAAE,MAAM,GAAG,cAAc,CAuCpE;AAOD,wBAAsB,6BAA6B,CAAC,EAAE,IAAI,EAAE,SAAS,EAAE,EAAE;IACvE,IAAI,EAAE,MAAM,CAAA;IACZ,SAAS,EAAE,MAAM,CAAA;CAClB,GAAG,OAAO,CAAC,IAAI,CAAC,CAsBhB;AA6DD,yEAAyE;AACzE,wBAAgB,cAAc,CAAC,IAAI,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,GAAG,SAAS,CAcxE;AA0GD;;;;;GAKG;AACH,wBAAgB,gBAAgB,CAAC,OAAO,EAAE,SAAS,UAAU,EAAE,GAAG,cAAc,CA6E/E;AAED;;;;GAIG;AACH,wBAAsB,iBAAiB,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAAC,cAAc,CAAC,CAqE5E"}

package/dist/loader.js

@@ -4,6 +4,7 @@ import { load as loadYaml } from 'js-yaml';
 import { z } from 'zod';
 import { MAX_SPEC_FILE_BYTES, MAX_STAGE_SPEC_FILE_BYTES, PIPELINE_CONFIG_FILE, DOCUMENTATION_DIRECTORY, DOCUMENTATION_FILE_SUFFIXES, SCHEMA_FILE_SUFFIXES, SCHEMAS_DIRECTORY, STAGE_FILE_SUFFIXES, } from './constants.js';
 import { SpecDefinitionError } from './errors.js';
+import { validatePipelineSourcePackage } from './source-package.js';
 import { flattenSpecIssues, formatSpecIssues } from './issues.js';
 import { isSchemaRef, identifierSchema, namedSchemaFileSchema, } from './columns.js';
 import { stageSpecSchema } from './envelope.js';
@@ -42,8 +43,12 @@ export async function loadPipelineConfig({ dir, allowMissingRoot = false }) {
 const pipelineConfigSchema = z.object({
     schema_version: z.literal(1),
     stage_directories: z.array(z.string().min(1)).min(1),
+    source_paths: z.array(z.string().min(1).max(1024)).min(1).max(256).optional(),
 }).strict();
-function parsePipelineConfig(contents) {
+export function parsePipelineConfig(contents) {
+    if (Buffer.byteLength(contents, 'utf8') > MAX_SPEC_FILE_BYTES) {
+        throw new SpecDefinitionError('pipeline config exceeds maximum size', PIPELINE_CONFIG_FILE);
+    }
     const parsed = pipelineConfigSchema.safeParse(parseYamlSource(PIPELINE_CONFIG_FILE, contents));
     if (!parsed.success) {
         throw new SpecDefinitionError(formatSpecIssues(parsed.error), PIPELINE_CONFIG_FILE, firstIssue(parsed.error).path);
@@ -65,6 +70,16 @@ function parsePipelineConfig(contents) {
         }
         seen.add(directory);
     }
+    const sourcePaths = new Set();
+    for (const path of parsed.data.source_paths ?? []) {
+        if (/^[A-Za-z]:/.test(path) || /[\\\x00-\x1f\x7f*?\[\]{}]/.test(path) ||
+            path.split('/').some(part => !part || part === '.' || part === '..' || part.toLowerCase() === '.git')) {
+            throw new SpecDefinitionError(`source path must be a literal relative POSIX file or directory: '${path}'`, PIPELINE_CONFIG_FILE, 'source_paths');
+        }
+        if (sourcePaths.has(path))
+            throw new SpecDefinitionError(`duplicate source path '${path}'`, PIPELINE_CONFIG_FILE, 'source_paths');
+        sourcePaths.add(path);
+    }
     return parsed.data;
 }
 function isContained(root, candidate) {
@@ -381,6 +396,8 @@ export async function loadSpecDirectory(dir) {
         const contents = await readFile(join(root, file), 'utf8');
         sources.push({ path: file, contents });
     }
-    return parseSpecSources(sources);
+    const loaded = parseSpecSources(sources);
+    await validatePipelineSourcePackage({ dir: root, config, stages: loaded.stages });
+    return loaded;
 }
 //# sourceMappingURL=loader.js.map

package/dist/loader.js.map

@@ -1 +1 @@
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package/dist/source-package.d.ts

@@ -0,0 +1,27 @@
+import type { PipelineConfig } from './loader.js';
+/** Selection only: transport separately verifies regular files, object hashes and bounded sizes. */
+export declare function selectPipelineSourcePaths({ config, paths }: {
+    config: PipelineConfig;
+    paths: readonly string[];
+}): ReadonlySet<string> | undefined;
+/** Dynamic imports/data dependencies belong in the reviewed directory selection, not guessed imports. */
+export declare function assertPipelineSourceDependencies({ stages, selectedPaths }: {
+    stages: readonly {
+        stage: string;
+        entrypoint?: string;
+        feeds?: Readonly<Record<string, {
+            decoder?: string;
+        }>>;
+        operations?: Readonly<Record<string, {
+            entrypoint?: string;
+        }>>;
+    }[];
+    selectedPaths: ReadonlySet<string>;
+}): void;
+/** Validate the same selection locally and after snapshot materialization. Never follow symlinks. */
+export declare function validatePipelineSourcePackage({ dir, config, stages }: {
+    dir: string;
+    config: PipelineConfig;
+    stages: Parameters<typeof assertPipelineSourceDependencies>[0]['stages'];
+}): Promise<void>;
+//# sourceMappingURL=source-package.d.ts.map

package/dist/source-package.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"source-package.d.ts","sourceRoot":"","sources":["../src/source-package.ts"],"names":[],"mappings":"AACA,OAAO,KAAK,EAAE,cAAc,EAAE,MAAM,aAAa,CAAA;AAOjD,oGAAoG;AACpG,wBAAgB,yBAAyB,CAAC,EAAE,MAAM,EAAE,KAAK,EAAE,EAAE;IAC3D,MAAM,EAAE,cAAc,CAAA;IACtB,KAAK,EAAE,SAAS,MAAM,EAAE,CAAA;CACzB,GAAG,WAAW,CAAC,MAAM,CAAC,GAAG,SAAS,CAgBlC;AAED,yGAAyG;AACzG,wBAAgB,gCAAgC,CAAC,EAAE,MAAM,EAAE,aAAa,EAAE,EAAE;IAC1E,MAAM,EAAE,SAAS;QACf,KAAK,EAAE,MAAM,CAAA;QACb,UAAU,CAAC,EAAE,MAAM,CAAA;QACnB,KAAK,CAAC,EAAE,QAAQ,CAAC,MAAM,CAAC,MAAM,EAAE;YAAE,OAAO,CAAC,EAAE,MAAM,CAAA;SAAE,CAAC,CAAC,CAAA;QACtD,UAAU,CAAC,EAAE,QAAQ,CAAC,MAAM,CAAC,MAAM,EAAE;YAAE,UAAU,CAAC,EAAE,MAAM,CAAA;SAAE,CAAC,CAAC,CAAA;KAC/D,EAAE,CAAA;IACH,aAAa,EAAE,WAAW,CAAC,MAAM,CAAC,CAAA;CACnC,GAAG,IAAI,CAUP;AAED,qGAAqG;AACrG,wBAAsB,6BAA6B,CAAC,EAAE,GAAG,EAAE,MAAM,EAAE,MAAM,EAAE,EAAE;IAC3E,GAAG,EAAE,MAAM,CAAA;IACX,MAAM,EAAE,cAAc,CAAA;IACtB,MAAM,EAAE,UAAU,CAAC,OAAO,gCAAgC,CAAC,CAAC,CAAC,CAAC,CAAC,QAAQ,CAAC,CAAA;CACzE,GAAG,OAAO,CAAC,IAAI,CAAC,CA+EhB"}

package/dist/source-package.js

@@ -0,0 +1,140 @@
+import { dirname } from 'node:path/posix';
+import { SpecDefinitionError } from './errors.js';
+import { PIPELINE_CONFIG_FILE, STAGE_FILE_SUFFIXES } from './constants.js';
+const metadataFiles = new Set([PIPELINE_CONFIG_FILE, 'pipeline.yml', 'external-assets.json', 'orm-contracts.json']);
+const metadataDirectories = ['schemas', 'documentation', 'migrations', 'extra-resources'];
+/** Selection only: transport separately verifies regular files, object hashes and bounded sizes. */
+export function selectPipelineSourcePaths({ config, paths }) {
+    if (!config.source_paths)
+        return undefined;
+    const selected = new Set();
+    for (const requested of config.source_paths) {
+        const matches = paths.filter(path => path === requested || path.startsWith(`${requested}/`));
+        if (!matches.length)
+            throw new SpecDefinitionError(`source path '${requested}' is missing or empty`, PIPELINE_CONFIG_FILE, 'source_paths');
+        for (const path of matches)
+            selected.add(path);
+    }
+    for (const path of paths) {
+        // Omitting metadata must never silently remove stages, contracts, workflow edges, or extra jobs.
+        if (metadataFiles.has(path) || metadataDirectories.some(dir => path === dir || path.startsWith(`${dir}/`)) ||
+            (config.stage_directories.includes(dirname(path)) && STAGE_FILE_SUFFIXES.some(suffix => path.endsWith(suffix)))) {
+            selected.add(path);
+        }
+    }
+    return selected;
+}
+/** Dynamic imports/data dependencies belong in the reviewed directory selection, not guessed imports. */
+export function assertPipelineSourceDependencies({ stages, selectedPaths }) {
+    for (const stage of stages) {
+        const required = [stage.entrypoint, ...Object.values(stage.feeds ?? {}).map(feed => feed.decoder),
+            ...Object.values(stage.operations ?? {}).map(operation => operation.entrypoint)];
+        for (const path of required) {
+            if (path !== undefined && !selectedPaths.has(path)) {
+                throw new SpecDefinitionError(`stage '${stage.stage}' requires '${path}'; include its runtime directory in source_paths`, PIPELINE_CONFIG_FILE, 'source_paths');
+            }
+        }
+    }
+}
+/** Validate the same selection locally and after snapshot materialization. Never follow symlinks. */
+export async function validatePipelineSourcePackage({ dir, config, stages }) {
+    if (!config.source_paths)
+        return;
+    const { readdir, readFile, lstat } = await import('node:fs/promises');
+    const { join, relative, sep, resolve } = await import('node:path');
+    const { load } = await import('js-yaml');
+    const inventory = new Map();
+    const visit = async (path) => {
+        if (inventory.has(path))
+            return;
+        let info;
+        try {
+            info = await lstat(join(dir, path));
+        }
+        catch (error) {
+            if (error instanceof Error && 'code' in error && error.code === 'ENOENT')
+                return;
+            throw error;
+        }
+        inventory.set(path, info);
+        if (info.isDirectory())
+            for (const name of await readdir(join(dir, path)))
+                await visit(`${path}/${name}`);
+    };
+    for (const path of [...config.source_paths, ...metadataFiles, ...metadataDirectories]) {
+        // A literal file selection must not tunnel through a symlinked ancestor.
+        const parts = path.split('/');
+        for (let end = 1; end < parts.length; end++) {
+            try {
+                if ((await lstat(join(dir, ...parts.slice(0, end)))).isSymbolicLink()) {
+                    throw new SpecDefinitionError(`source path '${path}' has a symlinked ancestor`, PIPELINE_CONFIG_FILE);
+                }
+            }
+            catch (error) {
+                if (!(error instanceof Error && 'code' in error && error.code === 'ENOENT'))
+                    throw error;
+            }
+        }
+        await visit(path);
+    }
+    for (const directory of config.stage_directories) {
+        for (const name of await readdir(join(dir, directory))) {
+            if (STAGE_FILE_SUFFIXES.some(suffix => name.endsWith(suffix)))
+                await visit(directory === '.' ? name : `${directory}/${name}`);
+        }
+    }
+    const paths = [...inventory].filter(([, info]) => !info.isDirectory()).map(([path]) => path);
+    const selectedPaths = selectPipelineSourcePaths({ config, paths });
+    for (const [path, info] of inventory) {
+        if (selectedPaths.has(path) && !info.isFile())
+            throw new SpecDefinitionError(`source path '${path}' must be a regular file`, PIPELINE_CONFIG_FILE);
+    }
+    assertPipelineSourceDependencies({ stages, selectedPaths });
+    const localFileKeys = new Set(['notebook_path', 'python_file', 'jar', 'whl', 'requirements']);
+    const assertLocalFile = (reference, file) => {
+        const child = reference.replace(/^file:/, '');
+        if (child.startsWith('/') || /^[a-z][a-z0-9+.-]*:/i.test(child))
+            return;
+        // Extra resource files are relocated to resources/ by the bundle compiler.
+        const local = child.replace(/^\$\{workspace\.file_path\}\//, '../').replace(/^\$\{workspace\.root_path\}\/files\//, '../');
+        if (local.includes('${'))
+            throw new SpecDefinitionError(`extra resource '${file}' has an unresolved local file reference '${child}'; use a literal path for a selected source package`, PIPELINE_CONFIG_FILE, 'source_paths');
+        const path = relative(resolve(dir), resolve(dir, 'resources', local)).split(sep).join('/');
+        if (!selectedPaths.has(path))
+            throw new SpecDefinitionError(`extra resource '${file}' requires local source '${child}'; include it in source_paths`, PIPELINE_CONFIG_FILE, 'source_paths');
+    };
+    const visiting = new Set();
+    const inspect = (value, file, ancestry = []) => {
+        if (!value || typeof value !== 'object')
+            return;
+        if (visiting.has(value))
+            throw new SpecDefinitionError(`cyclic extra resource '${file}'`, PIPELINE_CONFIG_FILE);
+        visiting.add(value);
+        if (Array.isArray(value)) {
+            for (const child of value) {
+                if (ancestry.at(-1) === 'dependencies' && ancestry.at(-2) === 'spec' && ancestry.includes('environments') && typeof child === 'string') {
+                    const requirementFile = /^(?:-r\s*|--requirement(?:\s+|=))/.test(child);
+                    const dependency = child.replace(/^.*?\s+@\s+/, '').replace(/^(?:-r\s*|--requirement(?:\s+|=))/, '');
+                    // Named PyPI requirements have no local file; preserve them and remote URIs.
+                    if (requirementFile || dependency.includes('/') || dependency.includes('${') || /\.(whl|zip|tar\.gz)$/.test(dependency))
+                        assertLocalFile(dependency, file);
+                }
+                inspect(child, file, ancestry);
+            }
+            visiting.delete(value);
+            return;
+        }
+        for (const [key, child] of Object.entries(value)) {
+            const remoteGitTask = 'source' in value && value.source === 'GIT' && ['notebook_path', 'python_file'].includes(key);
+            if (!remoteGitTask && (localFileKeys.has(key) || (key === 'path' && ['file', 'notebook'].includes(ancestry.at(-1) ?? ''))) && typeof child === 'string')
+                assertLocalFile(child, file);
+            inspect(child, file, [...ancestry, key]);
+        }
+        visiting.delete(value);
+    };
+    for (const path of selectedPaths) {
+        if (path.startsWith('extra-resources/') && /\.ya?ml$/.test(path))
+            inspect(load(await readFile(join(dir, path), 'utf8')), path);
+    }
+}
+//# sourceMappingURL=source-package.js.map

package/dist/source-package.js.map

@@ -0,0 +1 @@
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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@sequenceholdings/pipeline-spec",
-  "version": "0.3.0",
+  "version": "0.3.1",
   "description": "Data Pipelines spec SDK — typed stage specs (ingestion/transformation/serving), directory loader, target resolution with deterministic hashing, and offline graph validation",
   "license": "UNLICENSED",
   "publishConfig": {
@@ -27,7 +27,7 @@
   "dependencies": {
     "js-yaml": "^4.3.2",
     "zod": "^4.1.13",
-    "@sequenceholdings/orm": "2.7.1"
+    "@sequenceholdings/orm": "2.8.1"
   },
   "devDependencies": {
     "@types/js-yaml": "^4.0.9",