@semiont/vectors 0.5.6 → 0.5.7

package/README.md

@@ -28,7 +28,7 @@ const store = await createVectorStore({
 });
 ```
 
-Requires a running [Qdrant](https://qdrant.tech) instance. The `@qdrant/js-client-rest` peer dependency is lazy-loaded on `connect()`. Collections are auto-created if they don't exist.
+Requires a running [Qdrant](https://qdrant.tech) instance. The `@qdrant/js-client-rest` client is lazy-loaded on `connect()`. Collections are auto-created if they don't exist.
 
 ### Memory (testing)
 
@@ -115,15 +115,17 @@ await store.upsertResourceVectors(resourceId, chunks.map((text, i) => ({
 
 // Index an annotation
 const vec = await provider.embed(annotation.exactText);
-await store.upsertAnnotationVector(annotationId, {
+await store.upsertAnnotationVector(annotationId, vec, {
   annotationId,
   resourceId,
   motivation: 'describing',
   entityTypes: ['Person'],
   exactText: 'Marie Curie',
-}, vec);
+});
 ```
 
+`upsertResourceVectors` replaces all existing vectors for the resource, so re-indexing a resource that shrank leaves no orphan chunks.
+
 ## Configuration
 
 In `semiont.toml`:
@@ -134,13 +136,13 @@ type = "qdrant"
 host = "localhost"
 port = 6333
 
-[environments.local.services.vectors.embedding]
+[environments.local.services.embedding]
 type = "voyage"
 model = "voyage-3"
 
-[environments.local.services.vectors.chunking]
+[environments.local.services.embedding.chunking]
 chunkSize = 512
-overlap = 50
+overlap = 64
 ```
 
 ## License

package/dist/{chunk-IWHPVMXW.js → chunk-LCTHZYK4.js}

@@ -6,11 +6,14 @@ function toQdrantId(input) {
 }
 var QdrantVectorStore = class {
   client = null;
-  connected = false;
   config;
   constructor(config) {
     this.config = config;
   }
+  get qdrant() {
+    if (!this.client) throw new Error("QdrantVectorStore is not connected");
+    return this.client;
+  }
   async connect() {
     const { QdrantClient } = await import("@qdrant/js-client-rest");
     this.client = new QdrantClient({
@@ -19,37 +22,36 @@ var QdrantVectorStore = class {
     });
     await this.ensureCollection("resources", this.config.dimensions);
     await this.ensureCollection("annotations", this.config.dimensions);
-    this.connected = true;
   }
   async disconnect() {
     this.client = null;
-    this.connected = false;
   }
   async clearAll() {
     try {
-      await this.client.deleteCollection("resources");
+      await this.qdrant.deleteCollection("resources");
     } catch {
     }
     try {
-      await this.client.deleteCollection("annotations");
+      await this.qdrant.deleteCollection("annotations");
     } catch {
     }
     await this.ensureCollection("resources", this.config.dimensions);
     await this.ensureCollection("annotations", this.config.dimensions);
   }
   isConnected() {
-    return this.connected;
+    return this.client !== null;
   }
   async ensureCollection(name, dimensions) {
     try {
-      await this.client.getCollection(name);
+      await this.qdrant.getCollection(name);
     } catch {
-      await this.client.createCollection(name, {
+      await this.qdrant.createCollection(name, {
         vectors: { size: dimensions, distance: "Cosine" }
       });
     }
   }
-  async upsertResourceVectors(resourceId, chunks) {
+  async upsertResourceVectors(resourceId, chunks, contentChecksum) {
+    await this.deleteResourceVectors(resourceId);
     if (chunks.length === 0) return;
     const points = chunks.map((chunk) => ({
       id: toQdrantId(`${resourceId}-${chunk.chunkIndex}`),
@@ -57,13 +59,14 @@ var QdrantVectorStore = class {
       payload: {
         resourceId: String(resourceId),
         chunkIndex: chunk.chunkIndex,
-        text: chunk.text
+        text: chunk.text,
+        contentChecksum
       }
     }));
-    await this.client.upsert("resources", { points });
+    await this.qdrant.upsert("resources", { points });
   }
   async upsertAnnotationVector(annotationId, embedding, payload) {
-    await this.client.upsert("annotations", {
+    await this.qdrant.upsert("annotations", {
       points: [{
         id: toQdrantId(String(annotationId)),
         vector: embedding,
@@ -78,17 +81,73 @@ var QdrantVectorStore = class {
     });
   }
   async deleteResourceVectors(resourceId) {
-    await this.client.delete("resources", {
+    await this.qdrant.delete("resources", {
       filter: {
         must: [{ key: "resourceId", match: { value: String(resourceId) } }]
       }
     });
   }
   async deleteAnnotationVector(annotationId) {
-    await this.client.delete("annotations", {
+    await this.qdrant.delete("annotations", {
       points: [toQdrantId(String(annotationId))]
     });
   }
+  async deleteAnnotationVectorsForResource(resourceId) {
+    await this.qdrant.delete("annotations", {
+      filter: {
+        must: [{ key: "resourceId", match: { value: String(resourceId) } }]
+      }
+    });
+  }
+  async count() {
+    const [resources, annotations] = await Promise.all([
+      this.qdrant.count("resources", { exact: true }),
+      this.qdrant.count("annotations", { exact: true })
+    ]);
+    return resources.count + annotations.count;
+  }
+  async listResourceChecksums() {
+    const checksums = /* @__PURE__ */ new Map();
+    let offset = void 0;
+    do {
+      const page = await this.qdrant.scroll("resources", {
+        limit: 1e3,
+        offset,
+        with_payload: ["resourceId", "contentChecksum"],
+        with_vector: false
+      });
+      for (const point of page.points) {
+        const rid = point.payload?.resourceId;
+        if (typeof rid !== "string" || checksums.has(rid)) continue;
+        const checksum = point.payload?.contentChecksum;
+        checksums.set(rid, typeof checksum === "string" ? checksum : void 0);
+      }
+      offset = page.next_page_offset ?? void 0;
+    } while (offset !== void 0 && offset !== null);
+    return checksums;
+  }
+  async listAnnotationIds() {
+    return this.scrollPayloadField("annotations", "annotationId");
+  }
+  /** Collect the distinct values of one payload field across a collection. */
+  async scrollPayloadField(collection, field) {
+    const values = /* @__PURE__ */ new Set();
+    let offset = void 0;
+    do {
+      const page = await this.qdrant.scroll(collection, {
+        limit: 1e3,
+        offset,
+        with_payload: [field],
+        with_vector: false
+      });
+      for (const point of page.points) {
+        const value = point.payload?.[field];
+        if (typeof value === "string") values.add(value);
+      }
+      offset = page.next_page_offset ?? void 0;
+    } while (offset !== void 0 && offset !== null);
+    return values;
+  }
   async searchResources(embedding, opts) {
     return this.search("resources", embedding, opts);
   }
@@ -97,21 +156,24 @@ var QdrantVectorStore = class {
   }
   async search(collection, embedding, opts) {
     const filter = this.buildFilter(opts.filter);
-    const results = await this.client.search(collection, {
+    const results = await this.qdrant.search(collection, {
       vector: embedding,
       limit: opts.limit,
       score_threshold: opts.scoreThreshold,
-      filter: filter || void 0,
+      filter: filter ?? void 0,
       with_payload: true
     });
-    return results.map((r) => ({
-      id: String(r.id),
-      score: r.score,
-      resourceId: r.payload.resourceId,
-      annotationId: r.payload.annotationId,
-      text: r.payload.text,
-      entityTypes: r.payload.entityTypes
-    }));
+    return results.map((r) => {
+      const payload = r.payload ?? {};
+      return {
+        id: String(r.id),
+        score: r.score,
+        resourceId: payload.resourceId,
+        annotationId: payload.annotationId,
+        text: payload.text,
+        entityTypes: payload.entityTypes
+      };
+    });
   }
   buildFilter(filter) {
     if (!filter) return null;
@@ -140,4 +202,4 @@ var QdrantVectorStore = class {
 export {
   QdrantVectorStore
 };
-//# sourceMappingURL=chunk-IWHPVMXW.js.map
+//# sourceMappingURL=chunk-LCTHZYK4.js.map

package/dist/chunk-LCTHZYK4.js.map

@@ -0,0 +1 @@
+{"version":3,"sources":["../src/store/qdrant.ts"],"sourcesContent":["/**\n * Qdrant VectorStore Implementation\n *\n * Uses the Qdrant REST API via @qdrant/js-client-rest.\n * Manages two collections: 'resources' and 'annotations'.\n */\n\nimport { createHash } from 'crypto';\nimport type { QdrantClient, Schemas } from '@qdrant/js-client-rest';\nimport type { ResourceId, AnnotationId } from '@semiont/core';\nimport type { VectorStore, EmbeddingChunk, AnnotationPayload, VectorSearchResult, SearchOptions } from './interface';\n\n/**\n * Generate a deterministic UUID v5-style ID from an arbitrary string.\n * Qdrant requires point IDs to be UUIDs or unsigned integers.\n */\nfunction toQdrantId(input: string): string {\n  const hex = createHash('md5').update(input).digest('hex');\n  return `${hex.slice(0, 8)}-${hex.slice(8, 12)}-${hex.slice(12, 16)}-${hex.slice(16, 20)}-${hex.slice(20, 32)}`;\n}\n\nexport interface QdrantConfig {\n  host: string;\n  port: number;\n  dimensions: number;\n}\n\nexport class QdrantVectorStore implements VectorStore {\n  private client: QdrantClient | null = null;\n  private config: QdrantConfig;\n\n  constructor(config: QdrantConfig) {\n    this.config = config;\n  }\n\n  private get qdrant(): QdrantClient {\n    if (!this.client) throw new Error('QdrantVectorStore is not connected');\n    return this.client;\n  }\n\n  async connect(): Promise<void> {\n    const { QdrantClient } = await import('@qdrant/js-client-rest');\n    this.client = new QdrantClient({\n      host: this.config.host,\n      port: this.config.port,\n    });\n\n    // Ensure collections exist\n    await this.ensureCollection('resources', this.config.dimensions);\n    await this.ensureCollection('annotations', this.config.dimensions);\n  }\n\n  async disconnect(): Promise<void> {\n    this.client = null;\n  }\n\n  async clearAll(): Promise<void> {\n    try { await this.qdrant.deleteCollection('resources'); } catch { /* may not exist */ }\n    try { await this.qdrant.deleteCollection('annotations'); } catch { /* may not exist */ }\n    await this.ensureCollection('resources', this.config.dimensions);\n    await this.ensureCollection('annotations', this.config.dimensions);\n  }\n\n  isConnected(): boolean {\n    return this.client !== null;\n  }\n\n  private async ensureCollection(name: string, dimensions: number): Promise<void> {\n    try {\n      await this.qdrant.getCollection(name);\n    } catch {\n      await this.qdrant.createCollection(name, {\n        vectors: { size: dimensions, distance: 'Cosine' },\n      });\n    }\n  }\n\n  async upsertResourceVectors(resourceId: ResourceId, chunks: EmbeddingChunk[], contentChecksum: string): Promise<void> {\n    // Replace semantics: purge existing chunks first, or a resource that\n    // shrinks leaves orphan points at the higher chunk indices.\n    await this.deleteResourceVectors(resourceId);\n    if (chunks.length === 0) return;\n\n    const points = chunks.map((chunk) => ({\n      id: toQdrantId(`${resourceId}-${chunk.chunkIndex}`),\n      vector: chunk.embedding,\n      payload: {\n        resourceId: String(resourceId),\n        chunkIndex: chunk.chunkIndex,\n        text: chunk.text,\n        contentChecksum,\n      },\n    }));\n\n    await this.qdrant.upsert('resources', { points });\n  }\n\n  async upsertAnnotationVector(\n    annotationId: AnnotationId,\n    embedding: number[],\n    payload: AnnotationPayload\n  ): Promise<void> {\n    await this.qdrant.upsert('annotations', {\n      points: [{\n        id: toQdrantId(String(annotationId)),\n        vector: embedding,\n        payload: {\n          annotationId: String(payload.annotationId),\n          resourceId: String(payload.resourceId),\n          motivation: payload.motivation,\n          entityTypes: payload.entityTypes,\n          text: payload.exactText,\n        },\n      }],\n    });\n  }\n\n  async deleteResourceVectors(resourceId: ResourceId): Promise<void> {\n    await this.qdrant.delete('resources', {\n      filter: {\n        must: [{ key: 'resourceId', match: { value: String(resourceId) } }],\n      },\n    });\n  }\n\n  async deleteAnnotationVector(annotationId: AnnotationId): Promise<void> {\n    await this.qdrant.delete('annotations', {\n      points: [toQdrantId(String(annotationId))],\n    });\n  }\n\n  async deleteAnnotationVectorsForResource(resourceId: ResourceId): Promise<void> {\n    await this.qdrant.delete('annotations', {\n      filter: {\n        must: [{ key: 'resourceId', match: { value: String(resourceId) } }],\n      },\n    });\n  }\n\n  async count(): Promise<number> {\n    const [resources, annotations] = await Promise.all([\n      this.qdrant.count('resources', { exact: true }),\n      this.qdrant.count('annotations', { exact: true }),\n    ]);\n    return resources.count + annotations.count;\n  }\n\n  async listResourceChecksums(): Promise<Map<string, string | undefined>> {\n    const checksums = new Map<string, string | undefined>();\n    let offset: Schemas['ScrollRequest']['offset'] = undefined;\n    do {\n      const page = await this.qdrant.scroll('resources', {\n        limit: 1000,\n        offset,\n        with_payload: ['resourceId', 'contentChecksum'],\n        with_vector: false,\n      });\n      for (const point of page.points) {\n        const rid = point.payload?.resourceId;\n        if (typeof rid !== 'string' || checksums.has(rid)) continue;\n        const checksum = point.payload?.contentChecksum;\n        checksums.set(rid, typeof checksum === 'string' ? checksum : undefined);\n      }\n      offset = page.next_page_offset ?? undefined;\n    } while (offset !== undefined && offset !== null);\n    return checksums;\n  }\n\n  async listAnnotationIds(): Promise<Set<string>> {\n    return this.scrollPayloadField('annotations', 'annotationId');\n  }\n\n  /** Collect the distinct values of one payload field across a collection. */\n  private async scrollPayloadField(collection: string, field: string): Promise<Set<string>> {\n    const values = new Set<string>();\n    let offset: Schemas['ScrollRequest']['offset'] = undefined;\n    do {\n      const page = await this.qdrant.scroll(collection, {\n        limit: 1000,\n        offset,\n        with_payload: [field],\n        with_vector: false,\n      });\n      for (const point of page.points) {\n        const value = point.payload?.[field];\n        if (typeof value === 'string') values.add(value);\n      }\n      offset = page.next_page_offset ?? undefined;\n    } while (offset !== undefined && offset !== null);\n    return values;\n  }\n\n  async searchResources(embedding: number[], opts: SearchOptions): Promise<VectorSearchResult[]> {\n    return this.search('resources', embedding, opts);\n  }\n\n  async searchAnnotations(embedding: number[], opts: SearchOptions): Promise<VectorSearchResult[]> {\n    return this.search('annotations', embedding, opts);\n  }\n\n  private async search(collection: string, embedding: number[], opts: SearchOptions): Promise<VectorSearchResult[]> {\n    const filter = this.buildFilter(opts.filter);\n\n    const results = await this.qdrant.search(collection, {\n      vector: embedding,\n      limit: opts.limit,\n      score_threshold: opts.scoreThreshold,\n      filter: filter ?? undefined,\n      with_payload: true,\n    });\n\n    return results.map((r) => {\n      const payload = r.payload ?? {};\n      return {\n        id: String(r.id),\n        score: r.score,\n        resourceId: payload.resourceId as ResourceId,\n        annotationId: payload.annotationId as AnnotationId | undefined,\n        text: payload.text as string,\n        entityTypes: payload.entityTypes as string[] | undefined,\n      };\n    });\n  }\n\n  private buildFilter(filter?: SearchOptions['filter']): Schemas['Filter'] | null {\n    if (!filter) return null;\n\n    const must: Schemas['FieldCondition'][] = [];\n\n    if (filter.entityTypes && filter.entityTypes.length > 0) {\n      // any-of: match payloads whose `entityTypes` array contains at least one\n      // of the requested types. Matches the memory store's `some(t => ...)`\n      // semantics; pushing one `must` clause per type would mean all-of.\n      must.push({ key: 'entityTypes', match: { any: filter.entityTypes } });\n    }\n\n    if (filter.resourceId) {\n      must.push({ key: 'resourceId', match: { value: String(filter.resourceId) } });\n    }\n\n    if (filter.motivation) {\n      must.push({ key: 'motivation', match: { value: filter.motivation } });\n    }\n\n    const must_not: Schemas['FieldCondition'][] = [];\n\n    if (filter.excludeResourceId) {\n      must_not.push({ key: 'resourceId', match: { value: String(filter.excludeResourceId) } });\n    }\n\n    if (must.length === 0 && must_not.length === 0) return null;\n\n    return {\n      ...(must.length > 0 ? { must } : {}),\n      ...(must_not.length > 0 ? { must_not } : {}),\n    };\n  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package/dist/{chunk-INCF7JMV.js → chunk-UM3RNDW4.js}

@@ -46,4 +46,4 @@ var VoyageEmbeddingProvider = class {
 export {
   VoyageEmbeddingProvider
 };
-//# sourceMappingURL=chunk-INCF7JMV.js.map
+//# sourceMappingURL=chunk-UM3RNDW4.js.map

package/dist/chunk-UM3RNDW4.js.map

@@ -0,0 +1 @@
+{"version":3,"sources":["../src/embedding/voyage.ts"],"sourcesContent":["/**\n * Voyage AI Embedding Provider\n *\n * Cloud embedding via the Voyage AI API.\n * Requires a Voyage AI API key (distinct from Anthropic inference keys).\n */\n\nimport type { EmbeddingProvider } from './interface';\n\nexport interface VoyageConfig {\n  apiKey: string;\n  model: string;\n  endpoint?: string;\n}\n\nconst VOYAGE_DIMENSIONS: Record<string, number> = {\n  'voyage-3': 1024,\n  'voyage-3-lite': 512,\n  'voyage-code-3': 1024,\n  'voyage-finance-2': 1024,\n  'voyage-law-2': 1024,\n};\n\nexport class VoyageEmbeddingProvider implements EmbeddingProvider {\n  private config: VoyageConfig;\n\n  constructor(config: VoyageConfig) {\n    this.config = config;\n  }\n\n  async embed(text: string): Promise<number[]> {\n    const results = await this.embedBatch([text]);\n    return results[0];\n  }\n\n  async embedBatch(texts: string[]): Promise<number[][]> {\n    const endpoint = this.config.endpoint ?? 'https://api.voyageai.com/v1/embeddings';\n\n    const response = await fetch(endpoint, {\n      method: 'POST',\n      headers: {\n        'Content-Type': 'application/json',\n        'Authorization': `Bearer ${this.config.apiKey}`,\n      },\n      body: JSON.stringify({\n        model: this.config.model,\n        input: texts,\n      }),\n    });\n\n    if (!response.ok) {\n      const body = await response.text();\n      throw new Error(`Voyage API error ${response.status}: ${body}`);\n    }\n\n    const json = await response.json() as { data: Array<{ embedding: number[] }> };\n    return json.data.map(d => d.embedding);\n  }\n\n  dimensions(): number {\n    return VOYAGE_DIMENSIONS[this.config.model] ?? 1024;\n  }\n\n  model(): string {\n    return this.config.model;\n  }\n}\n"],"mappings":";AAeA,IAAM,oBAA4C;AAAA,EAChD,YAAY;AAAA,EACZ,iBAAiB;AAAA,EACjB,iBAAiB;AAAA,EACjB,oBAAoB;AAAA,EACpB,gBAAgB;AAClB;AAEO,IAAM,0BAAN,MAA2D;AAAA,EACxD;AAAA,EAER,YAAY,QAAsB;AAChC,SAAK,SAAS;AAAA,EAChB;AAAA,EAEA,MAAM,MAAM,MAAiC;AAC3C,UAAM,UAAU,MAAM,KAAK,WAAW,CAAC,IAAI,CAAC;AAC5C,WAAO,QAAQ,CAAC;AAAA,EAClB;AAAA,EAEA,MAAM,WAAW,OAAsC;AACrD,UAAM,WAAW,KAAK,OAAO,YAAY;AAEzC,UAAM,WAAW,MAAM,MAAM,UAAU;AAAA,MACrC,QAAQ;AAAA,MACR,SAAS;AAAA,QACP,gBAAgB;AAAA,QAChB,iBAAiB,UAAU,KAAK,OAAO,MAAM;AAAA,MAC/C;AAAA,MACA,MAAM,KAAK,UAAU;AAAA,QACnB,OAAO,KAAK,OAAO;AAAA,QACnB,OAAO;AAAA,MACT,CAAC;AAAA,IACH,CAAC;AAED,QAAI,CAAC,SAAS,IAAI;AAChB,YAAM,OAAO,MAAM,SAAS,KAAK;AACjC,YAAM,IAAI,MAAM,oBAAoB,SAAS,MAAM,KAAK,IAAI,EAAE;AAAA,IAChE;AAEA,UAAM,OAAO,MAAM,SAAS,KAAK;AACjC,WAAO,KAAK,KAAK,IAAI,OAAK,EAAE,SAAS;AAAA,EACvC;AAAA,EAEA,aAAqB;AACnB,WAAO,kBAAkB,KAAK,OAAO,KAAK,KAAK;AAAA,EACjD;AAAA,EAEA,QAAgB;AACd,WAAO,KAAK,OAAO;AAAA,EACrB;AACF;","names":[]}

package/dist/index.d.ts

@@ -43,12 +43,35 @@ interface VectorStore {
     disconnect(): Promise<void>;
     isConnected(): boolean;
     clearAll(): Promise<void>;
-    upsertResourceVectors(resourceId: ResourceId, chunks: EmbeddingChunk[]): Promise<void>;
+    /**
+     * Replace all vectors for a resource with the given chunks.
+     * Existing vectors for the resource are removed first, so a resource
+     * that shrinks to fewer chunks leaves no orphans. `contentChecksum` is
+     * the checksum of the bytes the chunks were computed from; it is stamped
+     * onto the points so reconciliation can detect stale-but-present
+     * resources (SMELTER-AXIOMS.md, S12).
+     */
+    upsertResourceVectors(resourceId: ResourceId, chunks: EmbeddingChunk[], contentChecksum: string): Promise<void>;
     upsertAnnotationVector(annotationId: AnnotationId, embedding: number[], payload: AnnotationPayload): Promise<void>;
     deleteResourceVectors(resourceId: ResourceId): Promise<void>;
     deleteAnnotationVector(annotationId: AnnotationId): Promise<void>;
+    /** Delete every annotation vector whose payload points at the resource. */
+    deleteAnnotationVectorsForResource(resourceId: ResourceId): Promise<void>;
     searchResources(embedding: number[], opts: SearchOptions): Promise<VectorSearchResult[]>;
     searchAnnotations(embedding: number[], opts: SearchOptions): Promise<VectorSearchResult[]>;
+    /**
+     * Total point count across all collections (resources + annotations).
+     * Feeds the `semiont.vector.index.size` gauge.
+     */
+    count(): Promise<number>;
+    /**
+     * Distinct resourceIds present in the resources collection, each with its
+     * stamped content checksum (undefined for points written before stamping
+     * existed — reconciliation treats those as stale and re-embeds them).
+     */
+    listResourceChecksums(): Promise<Map<string, string | undefined>>;
+    /** Distinct annotationIds present in the annotations collection. */
+    listAnnotationIds(): Promise<Set<string>>;
 }
 
 /**
@@ -65,18 +88,24 @@ interface QdrantConfig {
 }
 declare class QdrantVectorStore implements VectorStore {
     private client;
-    private connected;
     private config;
     constructor(config: QdrantConfig);
+    private get qdrant();
     connect(): Promise<void>;
     disconnect(): Promise<void>;
     clearAll(): Promise<void>;
     isConnected(): boolean;
     private ensureCollection;
-    upsertResourceVectors(resourceId: ResourceId, chunks: EmbeddingChunk[]): Promise<void>;
+    upsertResourceVectors(resourceId: ResourceId, chunks: EmbeddingChunk[], contentChecksum: string): Promise<void>;
     upsertAnnotationVector(annotationId: AnnotationId, embedding: number[], payload: AnnotationPayload): Promise<void>;
     deleteResourceVectors(resourceId: ResourceId): Promise<void>;
     deleteAnnotationVector(annotationId: AnnotationId): Promise<void>;
+    deleteAnnotationVectorsForResource(resourceId: ResourceId): Promise<void>;
+    count(): Promise<number>;
+    listResourceChecksums(): Promise<Map<string, string | undefined>>;
+    listAnnotationIds(): Promise<Set<string>>;
+    /** Collect the distinct values of one payload field across a collection. */
+    private scrollPayloadField;
     searchResources(embedding: number[], opts: SearchOptions): Promise<VectorSearchResult[]>;
     searchAnnotations(embedding: number[], opts: SearchOptions): Promise<VectorSearchResult[]>;
     private search;
@@ -98,10 +127,14 @@ declare class MemoryVectorStore implements VectorStore {
     disconnect(): Promise<void>;
     clearAll(): Promise<void>;
     isConnected(): boolean;
-    upsertResourceVectors(resourceId: ResourceId, chunks: EmbeddingChunk[]): Promise<void>;
+    upsertResourceVectors(resourceId: ResourceId, chunks: EmbeddingChunk[], contentChecksum: string): Promise<void>;
     upsertAnnotationVector(annotationId: AnnotationId, embedding: number[], payload: AnnotationPayload): Promise<void>;
     deleteResourceVectors(resourceId: ResourceId): Promise<void>;
     deleteAnnotationVector(annotationId: AnnotationId): Promise<void>;
+    deleteAnnotationVectorsForResource(resourceId: ResourceId): Promise<void>;
+    count(): Promise<number>;
+    listResourceChecksums(): Promise<Map<string, string | undefined>>;
+    listAnnotationIds(): Promise<Set<string>>;
     searchResources(embedding: number[], opts: SearchOptions): Promise<VectorSearchResult[]>;
     searchAnnotations(embedding: number[], opts: SearchOptions): Promise<VectorSearchResult[]>;
     private search;
@@ -111,7 +144,7 @@ declare class MemoryVectorStore implements VectorStore {
 /**
  * VectorStore Factory
  *
- * Creates a VectorStore instance based on configuration.
+ * Creates a connected VectorStore instance based on configuration.
  */
 
 interface VectorStoreConfig {
@@ -121,7 +154,6 @@ interface VectorStoreConfig {
     dimensions: number;
 }
 declare function createVectorStore(config: VectorStoreConfig): Promise<VectorStore>;
-declare function getVectorStore(): VectorStore | null;
 
 /**
  * EmbeddingProvider Interface
@@ -143,8 +175,8 @@ interface EmbeddingProvider {
 /**
  * Voyage AI Embedding Provider
  *
- * Cloud embedding via the Voyage AI API (partner of Anthropic).
- * Uses the same API key as Anthropic inference.
+ * Cloud embedding via the Voyage AI API.
+ * Requires a Voyage AI API key (distinct from Anthropic inference keys).
  */
 
 interface VoyageConfig {
@@ -214,5 +246,5 @@ declare const DEFAULT_CHUNKING_CONFIG: ChunkingConfig;
  */
 declare function chunkText(text: string, config?: ChunkingConfig): string[];
 
-export { DEFAULT_CHUNKING_CONFIG, MemoryVectorStore, OllamaEmbeddingProvider, QdrantVectorStore, VoyageEmbeddingProvider, chunkText, createEmbeddingProvider, createVectorStore, getVectorStore };
+export { DEFAULT_CHUNKING_CONFIG, MemoryVectorStore, OllamaEmbeddingProvider, QdrantVectorStore, VoyageEmbeddingProvider, chunkText, createEmbeddingProvider, createVectorStore };
 export type { AnnotationPayload, ChunkingConfig, EmbeddingChunk, EmbeddingConfig, EmbeddingProvider, OllamaEmbeddingConfig, QdrantConfig, SearchOptions, VectorSearchResult, VectorStore, VectorStoreConfig, VoyageConfig };

package/dist/index.js

@@ -1,9 +1,9 @@
 import {
   QdrantVectorStore
-} from "./chunk-IWHPVMXW.js";
+} from "./chunk-LCTHZYK4.js";
 import {
   VoyageEmbeddingProvider
-} from "./chunk-INCF7JMV.js";
+} from "./chunk-UM3RNDW4.js";
 import {
   OllamaEmbeddingProvider
 } from "./chunk-LBAPGZOW.js";
@@ -38,7 +38,7 @@ var MemoryVectorStore = class {
   isConnected() {
     return this.connected;
   }
-  async upsertResourceVectors(resourceId, chunks) {
+  async upsertResourceVectors(resourceId, chunks, contentChecksum) {
     this.resources = this.resources.filter((p) => p.payload.resourceId !== String(resourceId));
     for (const chunk of chunks) {
       this.resources.push({
@@ -47,7 +47,8 @@ var MemoryVectorStore = class {
         payload: {
           resourceId: String(resourceId),
           chunkIndex: chunk.chunkIndex,
-          text: chunk.text
+          text: chunk.text,
+          contentChecksum
         }
       });
     }
@@ -72,6 +73,28 @@ var MemoryVectorStore = class {
   async deleteAnnotationVector(annotationId) {
     this.annotations = this.annotations.filter((p) => p.id !== String(annotationId));
   }
+  async deleteAnnotationVectorsForResource(resourceId) {
+    this.annotations = this.annotations.filter((p) => p.payload.resourceId !== String(resourceId));
+  }
+  async count() {
+    return this.resources.length + this.annotations.length;
+  }
+  async listResourceChecksums() {
+    const checksums = /* @__PURE__ */ new Map();
+    for (const p of this.resources) {
+      if (!checksums.has(p.payload.resourceId)) {
+        checksums.set(p.payload.resourceId, p.payload.contentChecksum);
+      }
+    }
+    return checksums;
+  }
+  async listAnnotationIds() {
+    const ids = /* @__PURE__ */ new Set();
+    for (const p of this.annotations) {
+      if (p.payload.annotationId) ids.add(p.payload.annotationId);
+    }
+    return ids;
+  }
   async searchResources(embedding, opts) {
     return this.search(this.resources, embedding, opts);
   }
@@ -98,7 +121,7 @@ var MemoryVectorStore = class {
       score: cosineSimilarity(embedding, p.vector)
     }));
     scored.sort((a, b) => b.score - a.score);
-    if (opts.scoreThreshold) {
+    if (opts.scoreThreshold !== void 0) {
       const threshold = opts.scoreThreshold;
       return scored.filter((s) => s.score >= threshold).slice(0, opts.limit).map((s) => this.toResult(s));
     }
@@ -117,30 +140,26 @@ var MemoryVectorStore = class {
 };
 
 // src/store/factory.ts
-var instance = null;
 async function createVectorStore(config) {
-  if (instance) return instance;
+  let store;
   if (config.type === "qdrant") {
-    const { QdrantVectorStore: QdrantVectorStore2 } = await import("./qdrant-YF2TKFCE.js");
-    instance = new QdrantVectorStore2({
+    const { QdrantVectorStore: QdrantVectorStore2 } = await import("./qdrant-SE4WDTDB.js");
+    store = new QdrantVectorStore2({
       host: config.host ?? "localhost",
       port: config.port ?? 6333,
       dimensions: config.dimensions
     });
   } else {
-    instance = new MemoryVectorStore();
+    store = new MemoryVectorStore();
   }
-  await instance.connect();
-  return instance;
-}
-function getVectorStore() {
-  return instance;
+  await store.connect();
+  return store;
 }
 
 // src/embedding/factory.ts
 async function createEmbeddingProvider(config) {
   if (config.type === "voyage") {
-    const { VoyageEmbeddingProvider: VoyageEmbeddingProvider2 } = await import("./voyage-UWOFVIYM.js");
+    const { VoyageEmbeddingProvider: VoyageEmbeddingProvider2 } = await import("./voyage-NUSVXNJN.js");
     if (!config.apiKey) throw new Error("apiKey is required for Voyage embedding provider");
     return new VoyageEmbeddingProvider2({
       apiKey: config.apiKey,
@@ -209,7 +228,6 @@ export {
   VoyageEmbeddingProvider,
   chunkText,
   createEmbeddingProvider,
-  createVectorStore,
-  getVectorStore
+  createVectorStore
 };
 //# sourceMappingURL=index.js.map

package/dist/index.js.map

@@ -1 +1 @@
-{"version":3,"sources":["../src/store/memory.ts","../src/store/factory.ts","../src/embedding/factory.ts","../src/chunking.ts"],"sourcesContent":["/**\n * In-Memory VectorStore Implementation\n *\n * For testing and development without a running Qdrant instance.\n * Uses brute-force cosine similarity search.\n */\n\nimport type { ResourceId, AnnotationId } from '@semiont/core';\nimport type { VectorStore, EmbeddingChunk, AnnotationPayload, VectorSearchResult, SearchOptions } from './interface';\n\ninterface StoredPoint {\n  id: string;\n  vector: number[];\n  payload: {\n    resourceId: string;\n    annotationId?: string;\n    chunkIndex?: number;\n    text: string;\n    motivation?: string;\n    entityTypes?: string[];\n  };\n}\n\nfunction cosineSimilarity(a: number[], b: number[]): number {\n  let dotProduct = 0;\n  let normA = 0;\n  let normB = 0;\n  for (let i = 0; i < a.length; i++) {\n    dotProduct += a[i] * b[i];\n    normA += a[i] * a[i];\n    normB += b[i] * b[i];\n  }\n  const denom = Math.sqrt(normA) * Math.sqrt(normB);\n  return denom === 0 ? 0 : dotProduct / denom;\n}\n\nexport class MemoryVectorStore implements VectorStore {\n  private resources: StoredPoint[] = [];\n  private annotations: StoredPoint[] = [];\n  private connected = false;\n\n  async connect(): Promise<void> {\n    this.connected = true;\n  }\n\n  async disconnect(): Promise<void> {\n    this.connected = false;\n  }\n\n  async clearAll(): Promise<void> {\n    this.resources = [];\n    this.annotations = [];\n  }\n\n  isConnected(): boolean {\n    return this.connected;\n  }\n\n  async upsertResourceVectors(resourceId: ResourceId, chunks: EmbeddingChunk[]): Promise<void> {\n    // Remove existing vectors for this resource\n    this.resources = this.resources.filter(p => p.payload.resourceId !== String(resourceId));\n\n    for (const chunk of chunks) {\n      this.resources.push({\n        id: `${resourceId}-${chunk.chunkIndex}`,\n        vector: chunk.embedding,\n        payload: {\n          resourceId: String(resourceId),\n          chunkIndex: chunk.chunkIndex,\n          text: chunk.text,\n        },\n      });\n    }\n  }\n\n  async upsertAnnotationVector(\n    annotationId: AnnotationId,\n    embedding: number[],\n    payload: AnnotationPayload\n  ): Promise<void> {\n    this.annotations = this.annotations.filter(p => p.id !== String(annotationId));\n    this.annotations.push({\n      id: String(annotationId),\n      vector: embedding,\n      payload: {\n        annotationId: String(payload.annotationId),\n        resourceId: String(payload.resourceId),\n        motivation: payload.motivation,\n        entityTypes: payload.entityTypes,\n        text: payload.exactText,\n      },\n    });\n  }\n\n  async deleteResourceVectors(resourceId: ResourceId): Promise<void> {\n    this.resources = this.resources.filter(p => p.payload.resourceId !== String(resourceId));\n  }\n\n  async deleteAnnotationVector(annotationId: AnnotationId): Promise<void> {\n    this.annotations = this.annotations.filter(p => p.id !== String(annotationId));\n  }\n\n  async searchResources(embedding: number[], opts: SearchOptions): Promise<VectorSearchResult[]> {\n    return this.search(this.resources, embedding, opts);\n  }\n\n  async searchAnnotations(embedding: number[], opts: SearchOptions): Promise<VectorSearchResult[]> {\n    return this.search(this.annotations, embedding, opts);\n  }\n\n  private search(points: StoredPoint[], embedding: number[], opts: SearchOptions): VectorSearchResult[] {\n    let filtered = points;\n\n    if (opts.filter) {\n      const f = opts.filter;\n      filtered = points.filter(p => {\n        if (f.resourceId && p.payload.resourceId !== String(f.resourceId)) return false;\n        if (f.excludeResourceId && p.payload.resourceId === String(f.excludeResourceId)) return false;\n        if (f.motivation && p.payload.motivation !== f.motivation) return false;\n        if (f.entityTypes && f.entityTypes.length > 0) {\n          const pTypes = p.payload.entityTypes ?? 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package/dist/qdrant-SE4WDTDB.js

@@ -0,0 +1,7 @@
+import {
+  QdrantVectorStore
+} from "./chunk-LCTHZYK4.js";
+export {
+  QdrantVectorStore
+};
+//# sourceMappingURL=qdrant-SE4WDTDB.js.map

package/dist/{voyage-UWOFVIYM.js → voyage-NUSVXNJN.js}

@@ -1,7 +1,7 @@
 import {
   VoyageEmbeddingProvider
-} from "./chunk-INCF7JMV.js";
+} from "./chunk-UM3RNDW4.js";
 export {
   VoyageEmbeddingProvider
 };
-//# sourceMappingURL=voyage-UWOFVIYM.js.map
+//# sourceMappingURL=voyage-NUSVXNJN.js.map

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@semiont/vectors",
-  "version": "0.5.6",
+  "version": "0.5.7",
   "engines": {
     "node": ">=24.0.0"
   },

package/dist/chunk-INCF7JMV.js.map

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package/dist/chunk-IWHPVMXW.js.map

@@ -1 +0,0 @@
-{"version":3,"sources":["../src/store/qdrant.ts"],"sourcesContent":["/**\n * Qdrant VectorStore Implementation\n *\n * Uses the Qdrant REST API via @qdrant/js-client-rest.\n * Manages two collections: 'resources' and 'annotations'.\n */\n\nimport { createHash } from 'crypto';\nimport type { ResourceId, AnnotationId } from '@semiont/core';\nimport type { VectorStore, EmbeddingChunk, AnnotationPayload, VectorSearchResult, SearchOptions } from './interface';\n\n/**\n * Generate a deterministic UUID v5-style ID from an arbitrary string.\n * Qdrant requires point IDs to be UUIDs or unsigned integers.\n */\nfunction toQdrantId(input: string): string {\n  const hex = createHash('md5').update(input).digest('hex');\n  return `${hex.slice(0, 8)}-${hex.slice(8, 12)}-${hex.slice(12, 16)}-${hex.slice(16, 20)}-${hex.slice(20, 32)}`;\n}\n\nexport interface QdrantConfig {\n  host: string;\n  port: number;\n  dimensions: number;\n}\n\nexport class QdrantVectorStore implements VectorStore {\n  private client: any = null;\n  private connected = false;\n  private config: QdrantConfig;\n\n  constructor(config: QdrantConfig) {\n    this.config = config;\n  }\n\n  async connect(): Promise<void> {\n    const { QdrantClient } = await import('@qdrant/js-client-rest');\n    this.client = new QdrantClient({\n      host: this.config.host,\n      port: this.config.port,\n    });\n\n    // Ensure collections exist\n    await this.ensureCollection('resources', this.config.dimensions);\n    await this.ensureCollection('annotations', this.config.dimensions);\n    this.connected = true;\n  }\n\n  async disconnect(): Promise<void> {\n    this.client = null;\n    this.connected = false;\n  }\n\n  async clearAll(): Promise<void> {\n    try { await this.client.deleteCollection('resources'); 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package/dist/qdrant-YF2TKFCE.js

@@ -1,7 +0,0 @@
-import {
-  QdrantVectorStore
-} from "./chunk-IWHPVMXW.js";
-export {
-  QdrantVectorStore
-};
-//# sourceMappingURL=qdrant-YF2TKFCE.js.map