@securecode-ai/mcp 0.3.9 → 0.4.1

package/README.md

@@ -8,15 +8,54 @@ Standalone MCP (Model Context Protocol) server for SecureCode AI. Provides secur
 npm install -g @securecode-ai/mcp
 ```
 
-## Authenticate
+## Quick Start
 
 ```bash
-securecode-mcp login
+securecode-mcp login              # Authenticate (email + OTP)
+securecode-mcp doctor             # Verify your setup works
+securecode-mcp scan src/app.ts    # Scan a file from the CLI
+securecode-mcp serve              # Start the MCP server (for AI clients)
 ```
 
-Enter your email, receive a 6-digit verification code, and paste it back. Your JWT is stored in the OS keychain (Windows Credential Manager, macOS Keychain, or Linux Secret Service). If the keychain is unavailable, it falls back to `~/.securecode/credentials.json` (mode 0600).
+## CLI Commands
 
-Alternatively, set the `SECURECODE_API_TOKEN` environment variable.
+```bash
+securecode-mcp serve [--workspace <path>]         Start the MCP stdio server
+securecode-mcp login [--api-url <url>]             Authenticate via email + OTP
+securecode-mcp status                              Show current auth status
+securecode-mcp logout                              Remove stored credentials
+securecode-mcp scan <filePath> [--json]            Scan a single file
+  [--depth <fast|deep|agent>] [--workspace <path>]
+securecode-mcp doctor                              Verify setup (credentials, API, scan)
+securecode-mcp --help                              Show help
+```
+
+### Scan from CLI
+
+```bash
+# Agent scan (deep, AI-powered)
+securecode-mcp scan src/app/api/users/route.ts
+
+# Fast scan (no AI, free, <5s)
+securecode-mcp scan src/lib/auth.ts --depth fast
+
+# JSON output for CI
+securecode-mcp scan src/app.ts --json
+
+# Exit codes: 0 = no findings, 1 = findings found, 2 = error
+```
+
+### CI/CD Example
+
+```yaml
+# GitHub Action
+- name: SecureCode scan
+  run: |
+    npm install -g @securecode-ai/mcp
+    securecode-mcp login  # or set SECURECODE_API_TOKEN
+    securecode-mcp scan src/ --json > scan-results.json
+    # Exit 1 if findings found
+```
 
 ## MCP client configuration
 
@@ -39,29 +78,80 @@ Alternatively, set the `SECURECODE_API_TOKEN` environment variable.
 claude mcp add securecode -s user -- securecode-mcp serve --workspace /path/to/your/project
 ```
 
-## Tools
+## Tools (11)
+
+### Scanning
+
+| Tool | Description | Approval |
+|------|-------------|----------|
+| `securecode.scan` | Scan code for vulnerabilities (AI pipeline) | No |
+| `securecode.agent-scan` | Agent-mode deep scan with 10 tools + sandbox proof | No |
+| `securecode.scan-batch` | Scan multiple files in one call | No |
+| `securecode.scan-secrets` | Scan for hardcoded secrets and PII (local, no AI) | No |
+| `securecode.scan-dependencies` | Scan lockfiles for known vulnerabilities (OSV/NVD) | No |
+
+### Project Analysis
 
 | Tool | Description | Approval |
 |------|-------------|----------|
-| `securecode.scan` | Scan code for vulnerabilities using the AI pipeline | No |
 | `securecode.map` | Get the Project Map (endpoints, middleware, auth) | No |
+
+### Fixes & Testing
+
+| Tool | Description | Approval |
+|------|-------------|----------|
 | `securecode.fix` | Generate a patch for a specific finding | Yes |
 | `securecode.attack` | Endpoint red-team testing (beta) | Yes |
 
-## CLI
+### Agent Memory (FP Learning)
+
+| Tool | Description | Approval |
+|------|-------------|----------|
+| `securecode.record-false-positive` | Dismiss a finding as FP — agent learns not to report it | No |
+| `securecode.get-agent-memory` | View learned false positives and known facts | No |
+| `securecode.clear-agent-memory` | Clear all agent memory (or one FP by ID) | No |
+| `securecode.add-known-fact` | Add a project fact for faster investigations | No |
+
+### How Agent Memory Works
+
+When the agent reports a false positive, dismiss it with `record-false-positive`. The agent stores the pattern in `.securecode/agent-memory.json` and will not report similar patterns in future scans of that workspace.
 
-```bash
-securecode-mcp serve [--workspace <path>]    Start the MCP stdio server
-securecode-mcp login [--api-url <url>]      Authenticate via email + OTP
-securecode-mcp status                       Show auth status
-securecode-mcp logout                       Remove credentials
 ```
+Scan 1: Agent reports csp_bypass → You dismiss as "intentional design"
+Scan 2: Agent sees the FP memory → skips similar patterns → fewer false positives
+```
+
+Memory is per-workspace, user-owned, and deletable. No cross-tenant leakage.
+
+## Agent Scan Architecture
+
+The agent scan (`securecode.agent-scan`) is an AI investigator that:
+
+1. **Reads** the target file and related files (10 tools)
+2. **Traces** data flows (taint tracking, cross-file)
+3. **Checks** guards and endpoint policies
+4. **Self-critiques** before reporting (selfCritique field)
+5. **Gets reviewed** by an independent critique LLM
+6. **Proves** findings in a sandbox (PROVEN/UNPROVEN)
+7. **Generates fixes** for proven findings
+
+Agent tools: `read_file`, `search_code`, `trace_flow`, `trace_flow_cross_file`, `check_guard`, `check_policy`, `get_endpoints`, `list_imports`, `list_files`, `finish`.
+
+Languages: JavaScript, TypeScript, Python (partial).
+
+## Environment Variables
+
+| Variable | Default | Description |
+|----------|---------|-------------|
+| `SECURECODE_API_TOKEN` | — | API token (alternative to login) |
+| `SECURECODE_API_URL` | `https://api.usesecurecode.tech` | API base URL |
 
 ## Security
 
-- Credentials stored in OS keychain (Windows Credential Manager, macOS Keychain, Linux Secret Service) with file fallback.
+- Credentials stored in OS keychain (Windows Credential Manager, macOS Keychain, Linux Secret Service) with file fallback (`~/.securecode/credentials.json`, mode 0600).
 - File reads are confined to the `--workspace` root.
 - Fixes are returned for review and never auto-applied.
+- Agent memory is per-workspace (`.securecode/agent-memory.json`), never sent to the API.
 - No telemetry.
 
 ## Development
@@ -71,3 +161,7 @@ npm install
 npm run build
 npm test
 ```
+
+## License
+
+MIT

package/dist/api/client.d.ts

@@ -18,7 +18,7 @@ export declare class ApiClient {
     private readonly token;
     private readonly timeoutMs;
     constructor(opts: ApiClientOptions);
-    postJson<T>(path: string, body: unknown): Promise<T>;
+    postJson<T>(path: string, body: unknown, signal?: AbortSignal): Promise<T>;
     /**
      * POST without an Authorization header — for login/OTP before a token exists.
      */

package/dist/api/client.js

@@ -72,7 +72,7 @@ class ApiClient {
         this.token = opts.token;
         this.timeoutMs = opts.timeoutMs ?? DEFAULT_TIMEOUT_MS;
     }
-    async postJson(path, body) {
+    async postJson(path, body, signal) {
         const url = `${this.baseUrl}${path}`;
         const payload = JSON.stringify(body);
         const parsed = new URL(url);
@@ -88,6 +88,7 @@ class ApiClient {
                     'Content-Length': Buffer.byteLength(payload),
                     Authorization: `Bearer ${this.token}`,
                 },
+                signal, // AbortSignal — when aborted, the request is destroyed
             }, (res) => {
                 let raw = '';
                 let aborted = false;

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package/dist/api/types.d.ts

@@ -167,3 +167,21 @@ export interface ProjectMap {
     builtAt?: string;
     version?: number;
 }
+export interface SandboxProveResponse {
+    proven: 'PROVEN' | 'UNPROVEN' | 'INCONCLUSIVE' | 'NOT_REPRODUCIBLE';
+    canReproduce: boolean;
+    skipReason?: string;
+    rationale?: string;
+    degraded: boolean;
+    sandbox?: {
+        verdict: string;
+        rule: string;
+        reason: string;
+        serverBooted: boolean;
+        port: number;
+        elapsedMs: number;
+        baselineStatus?: number;
+        exploitStatus?: number;
+    };
+    scanCredits?: number;
+}

package/dist/attack/agentScanExecutor.js

@@ -47,9 +47,14 @@ const path = __importStar(require("path"));
 const files_1 = require("../utils/files");
 const searchCode_1 = require("../utils/searchCode");
 const taintTracker_1 = require("../project-map/taintTracker");
+const crossFileTaintTracker_1 = require("../project-map/crossFileTaintTracker");
 const guardEvaluator_1 = require("../project-map/guardEvaluator");
 const report_1 = require("./report");
-const MAX_OBSERVATION_CHARS = 8000;
+const endpointDiscovery_1 = require("../project-map/endpointDiscovery");
+const listImports_1 = require("../utils/listImports");
+const listFiles_1 = require("../utils/listFiles");
+const MAX_OBSERVATION_CHARS = 16000;
+const LARGE_FILE_THRESHOLD = 300;
 function truncate(text) {
     if (text.length <= MAX_OBSERVATION_CHARS)
         return text;
@@ -108,6 +113,86 @@ function findFunctionInFile(source, functionName) {
 function escapeRegex(s) {
     return s.replace(/[.*+?^${}()|[\]\\]/g, '\\$&');
 }
+/**
+ * Extract a function map from source code using tree-sitter.
+ * Returns a string like:
+ *   Function map:
+ *     L1-20   requireAuth (function_declaration)
+ *     L22-50  requireMembership (function_declaration)
+ *     ...
+ * Returns null if tree-sitter parsing fails.
+ */
+async function extractFunctionMap(content, relPath) {
+    try {
+        const { parseSource } = await Promise.resolve().then(() => __importStar(require('../project-map/parserLoader')));
+        const { walk } = await Promise.resolve().then(() => __importStar(require('../project-map/astHelpers')));
+        // Infer language from path
+        const ext = path.extname(relPath).toLowerCase();
+        const langMap = {
+            '.ts': 'typescript', '.tsx': 'tsx', '.js': 'javascript',
+            '.jsx': 'javascript', '.py': 'python',
+        };
+        const lang = langMap[ext];
+        if (!lang)
+            return null;
+        const parsed = await parseSource(content, lang);
+        if (!parsed)
+            return null;
+        const { root } = parsed;
+        const entries = [];
+        const FUNCTION_TYPES = new Set([
+            'function_declaration', 'async_function_declaration',
+            'method_definition', 'async_method_definition',
+            'arrow_function', 'function_expression',
+            'class_declaration', 'export_statement',
+        ]);
+        for (const node of walk(root)) {
+            if (!FUNCTION_TYPES.has(node.type))
+                continue;
+            // Get the name (first identifier child or property_identifier)
+            let name = '';
+            for (const child of node.children) {
+                if (child.type === 'identifier' || child.type === 'property_identifier' || child.type === 'type_identifier') {
+                    name = content.slice(child.startIndex, child.endIndex);
+                    break;
+                }
+            }
+            if (!name)
+                continue;
+            const startLine = node.startPosition.row + 1;
+            const endLine = node.endPosition.row + 1;
+            const lineCount = endLine - startLine + 1;
+            const kind = node.type.replace(/_/g, ' ');
+            entries.push(`  L${startLine}-${endLine} (${lineCount}L) ${name} [${kind}]`);
+        }
+        if (entries.length === 0)
+            return null;
+        // Also include export-level structure for TS/JS
+        const exportLines = [];
+        for (const node of walk(root)) {
+            if (node.type === 'export_statement') {
+                const text = content.slice(node.startIndex, node.endIndex);
+                const firstLine = text.split('\n')[0];
+                if (firstLine.length > 100) {
+                    exportLines.push(`  L${node.startPosition.row + 1} ${firstLine.slice(0, 100)}...`);
+                }
+                else {
+                    exportLines.push(`  L${node.startPosition.row + 1} ${firstLine}`);
+                }
+            }
+        }
+        const parts = ['Function map (use read_file with startLine/endLine to read specific sections):'];
+        parts.push(...entries);
+        if (exportLines.length > 0 && exportLines.length <= 20) {
+            parts.push('', 'Exports:');
+            parts.push(...exportLines);
+        }
+        return parts.join('\n');
+    }
+    catch {
+        return null;
+    }
+}
 async function executeAction(action, ctx, runId, client, target) {
     switch (action.type) {
         case 'read_file': {
@@ -115,12 +200,29 @@ async function executeAction(action, ctx, runId, client, target) {
                 const absPath = (0, files_1.resolveWorkspacePath)(ctx.workspaceRoot, action.path);
                 const content = fs.readFileSync(absPath, 'utf8');
                 const rel = path.relative(ctx.workspaceRoot, absPath).replace(/\\/g, '/');
-                const lines = content.split('\n').length;
-                const numbered = content
-                    .split('\n')
+                const allLines = content.split('\n');
+                const totalLines = allLines.length;
+                // If startLine/endLine provided, return only that range
+                if (action.startLine || action.endLine) {
+                    const start = Math.max(1, action.startLine || 1);
+                    const end = Math.min(totalLines, action.endLine || totalLines);
+                    const section = allLines.slice(start - 1, end)
+                        .map((line, i) => `${start + i}: ${line}`)
+                        .join('\n');
+                    return redact(`File: ${rel} (lines ${start}-${end} of ${totalLines})\n\n${section}`);
+                }
+                // For large files, return a function map instead of raw content
+                if (totalLines > LARGE_FILE_THRESHOLD) {
+                    const funcMap = await extractFunctionMap(content, rel);
+                    if (funcMap) {
+                        return redact(`File: ${rel} (${totalLines} lines — LARGE FILE)\n\nThis file is too large to show in full. Here is a function map. Use read_file with startLine/endLine to read specific sections.\n\n${funcMap}`);
+                    }
+                }
+                // Small file: return full content with line numbers
+                const numbered = allLines
                     .map((line, i) => `${i + 1}: ${line}`)
                     .join('\n');
-                return redact(`File: ${rel} (${lines} lines)\n\n${numbered}`);
+                return redact(`File: ${rel} (${totalLines} lines)\n\n${numbered}`);
             }
             catch (e) {
                 return `Error reading file "${action.path}": ${e.message || e}`;
@@ -160,6 +262,28 @@ async function executeAction(action, ctx, runId, client, target) {
                 return `Error tracing flow in "${action.filePath}": ${e.message || e}`;
             }
         }
+        case 'trace_flow_cross_file': {
+            try {
+                const results = await (0, crossFileTaintTracker_1.trackTaintCrossFile)({
+                    workspaceRoot: ctx.workspaceRoot,
+                    filePath: action.filePath,
+                    maxDepth: action.maxDepth ?? 3,
+                });
+                if (results.length === 0) {
+                    return `No cross-file taint flows found starting from ${action.filePath}.`;
+                }
+                const formatted = results.map(r => {
+                    const path = r.crossFileSteps
+                        .map(s => `  ${s.file}:${s.line} ${s.operation}: ${s.description}`)
+                        .join('\n');
+                    return `${r.source} (${r.sourceFile}:${r.sourceLine}) → ${r.sink} (${r.sinkFile}:${r.sinkLine}) [${r.canonicalType}]\n${path}`;
+                }).join('\n\n');
+                return redact(formatted);
+            }
+            catch (e) {
+                return `Error tracing cross-file flow from "${action.filePath}": ${e.message || e}`;
+            }
+        }
         case 'check_guard': {
             try {
                 const absPath = (0, files_1.resolveWorkspacePath)(ctx.workspaceRoot, action.filePath);
@@ -199,6 +323,36 @@ async function executeAction(action, ctx, runId, client, target) {
                 return `Error running check_policy: ${e.message || e}`;
             }
         }
+        case 'get_endpoints': {
+            try {
+                const endpoints = await (0, endpointDiscovery_1.discoverEndpoints)(ctx.workspaceRoot, action.glob);
+                return truncate((0, endpointDiscovery_1.formatEndpoints)(endpoints));
+            }
+            catch (e) {
+                return `Error discovering endpoints: ${e.message || e}`;
+            }
+        }
+        case 'list_imports': {
+            try {
+                const imports = await (0, listImports_1.listImports)(ctx.workspaceRoot, action.filePath);
+                return truncate((0, listImports_1.formatImports)(imports, action.filePath));
+            }
+            catch (e) {
+                return `Error listing imports for "${action.filePath}": ${e.message || e}`;
+            }
+        }
+        case 'list_files': {
+            try {
+                const files = (0, listFiles_1.listFiles)(ctx.workspaceRoot, {
+                    dir: action.path,
+                    glob: action.glob,
+                });
+                return truncate((0, listFiles_1.formatFileList)(files));
+            }
+            catch (e) {
+                return `Error listing files: ${e.message || e}`;
+            }
+        }
         case 'finish': {
             // finish is handled by the loop, not the executor
             return '';

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