@seclai/cli 1.0.6 → 1.1.1

package/README.md

@@ -1,143 +1,471 @@
 # Seclai CLI
 
-Seclai Command Line Interface
+Full-featured command-line interface for the [Seclai](https://seclai.com) platform.
+Manage agents, knowledge bases, sources, memory banks, evaluations, solutions, governance, and more — all from the terminal.
 
-## Install
+All commands return JSON to stdout, so you can pipe into `jq` or other tools.
 
-Global install (recommended):
+## Install
 
 ```bash
 npm i -g @seclai/cli
 ```
 
-## Documentation
+Or run directly via npx (no install needed):
 
-Command reference (latest):
+```bash
+npx @seclai/cli agents list
+```
 
-https://seclai.github.io/seclai-cli/1.0.6/
+### Setup Skills and MCP
 
-## Authentication
+If you are using an AI coding agent like Claude Code, you can also install the skill individually with:
+
+```sh
+seclai skills install
+```
+
+This installs skills into all detected coding editors by default. Use `--tool <tool>` to scope it to one editor.
+
+To install the Seclai MCP server into your editors (Cursor, Claude Code, VS Code, etc.):
+
+```sh
+seclai mcp configure --key "$SECLAI_API_KEY"
+```
+
+Or directly via npx:
+
+```sh
+npx skills add seclai/seclai-cli --full-depth --global --all
+npx add-mcp https://api.seclai.com/mcp --header "X-API-Key: $SECLAI_API_KEY" --name Seclai
+```
+
+## Documentation
 
-The CLI uses API key authentication.
+Command reference (latest): https://seclai.github.io/seclai-cli/1.1.1/
 
-Set `SECLAI_API_KEY` (or pass `--api-key`).
+## Authentication
 
-You can also pass options per command:
+Set the `SECLAI_API_KEY` environment variable, or pass `--api-key` per-command:
 
 ```bash
-seclai --api-key "$SECLAI_API_KEY" sources list
+export SECLAI_API_KEY="sk-..."
+
+# or inline
+seclai --api-key "$SECLAI_API_KEY" agents list
 ```
 
+## Environment Variables
+
+| Variable | Description |
+|---|---|
+| `SECLAI_API_KEY` | Default API key (alternative to `--api-key`) |
+| `SECLAI_API_URL` | Override API base URL (default: `https://api.seclai.com`) |
+
+## Global Options
+
+| Flag | Description |
+|---|---|
+| `--api-key <key>` | Seclai API key |
+| `--compact` | Output compact (single-line) JSON |
+| `-V, --version` | Print version |
+
+---
+
 ## Commands
 
-### Sources
+### Agents
 
-List sources:
+```bash
+seclai agents list [--page N] [--limit N]
+seclai agents create --json '{"name":"My Agent"}'
+seclai agents get <agentId>
+seclai agents update <agentId> --json '{"name":"Renamed"}'
+seclai agents delete <agentId>
+```
+
+#### Running Agents
+
+Four modes: basic, streaming (SSE wait), events (NDJSON), and polling.
 
 ```bash
-seclai sources list
-seclai sources list --page 1 --limit 20 --sort created_at --order desc
-seclai sources list --account-id 9f3c2a7d-2d4a-4c8e-9d1d-3f7a2f1c0b5e
+# Basic run (returns final result)
+seclai agents run <agentId> --json '{"input":"Hello"}'
+seclai agents run <agentId> --json-file ./run.json
+cat run.json | seclai agents run <agentId> --json-file -
+
+# SSE streaming (waits for done event or timeout)
+seclai agents run <agentId> --json '{"input":"Hi"}' --stream --timeout-ms 60000
+
+# NDJSON event stream (outputs every SSE event as a JSON line)
+seclai agents run <agentId> --json '{"input":"Hi"}' --events
+seclai agents run <agentId> --json '{"input":"Hi"}' --events --event-filter status
+seclai agents run <agentId> --json '{"input":"Hi"}' --events --output data
+
+# Polling (submit then poll until complete)
+seclai agents run <agentId> --json '{"input":"Hi"}' --poll --poll-interval-ms 2000
 ```
 
-Upload a file to a source connection:
+#### Agent Runs
 
 ```bash
-seclai sources upload 2b1f0f3a-1d2c-4b5a-8e9f-0a1b2c3d4e5f --file ./mydoc.pdf
-seclai sources upload 2b1f0f3a-1d2c-4b5a-8e9f-0a1b2c3d4e5f --file ./notes.txt --title "Notes" --mime-type text/plain
-seclai sources upload 2b1f0f3a-1d2c-4b5a-8e9f-0a1b2c3d4e5f --file ./mydoc.pdf --metadata '{"category":"docs","author":"Ada"}'
+seclai agents runs list <agentId> [--page N] [--limit N]
+seclai agents runs get <runId> [--include-step-outputs]
+seclai agents runs delete <runId>
+seclai agents runs cancel <runId>
+seclai agents runs search [--page N] [--limit N] [--json '...']
+seclai agents runs eval-results <agentId> <runId> [--page N] [--limit N]
 ```
 
-### Agents
+#### Agent Definition
 
-Run an agent (body is JSON):
+```bash
+seclai agents def get <agentId>
+seclai agents def update <agentId> --json '{"steps":[...]}'
+```
+
+#### Agent Input Upload
 
 ```bash
-seclai agents run 6b9e2a1c-4d5f-4a7b-9c0d-1e2f3a4b5c6d --json '{"query":"hello"}'
-seclai agents run 6b9e2a1c-4d5f-4a7b-9c0d-1e2f3a4b5c6d --json-file ./run.json
-cat ./run.json | seclai agents run 6b9e2a1c-4d5f-4a7b-9c0d-1e2f3a4b5c6d --json-file -
+seclai agents upload-input <agentId> --file ./data.csv [--file-name data.csv] [--mime-type text/csv]
+seclai agents input-status <agentId> <uploadId>
 ```
 
-Run an agent via SSE streaming (waits until the final result or timeout):
+#### Agent AI Assistant
 
-This command exits successfully when the stream emits the final `done` event; it fails if the stream ends early or the timeout is reached.
+```bash
+seclai agents ai gen-steps <agentId> --user-input "Build a QA chatbot"
+seclai agents ai step-config <agentId> --user-input "Configure the search step"
+seclai agents ai history <agentId>
+seclai agents ai mark <agentId> <conversationId> --json '{"accepted":true}'
+```
+
+### Sources
 
 ```bash
-seclai agents run 6b9e2a1c-4d5f-4a7b-9c0d-1e2f3a4b5c6d \
-	--json '{"input":"Hello from streaming"}' \
-	--stream \
-	--timeout-ms 60000
+seclai sources list [--page N] [--limit N] [--sort <field>] [--order asc|desc]
+seclai sources create --json '{"name":"Docs","type":"manual"}'
+seclai sources get <sourceId>
+seclai sources update <sourceId> --json '{"name":"Renamed"}'
+seclai sources delete <sourceId>
 ```
 
-List runs:
+`source` is an alias for `sources` (e.g. `seclai source list`).
+
+#### Upload
 
 ```bash
-seclai agents runs list 6b9e2a1c-4d5f-4a7b-9c0d-1e2f3a4b5c6d
-seclai agents runs list 6b9e2a1c-4d5f-4a7b-9c0d-1e2f3a4b5c6d --page 1 --limit 50
+seclai sources upload <sourceId> --file ./doc.pdf [--title "Doc"] [--mime-type application/pdf] [--metadata '{}']
+seclai sources upload-text <sourceId> --json '{"title":"Note","text":"Hello world"}'
 ```
 
-Get a run:
+#### Exports
 
 ```bash
-seclai runs get 3f1a2b4c-5d6e-4f70-8a9b-1c2d3e4f5a6b
-seclai runs get 3f1a2b4c-5d6e-4f70-8a9b-1c2d3e4f5a6b --include-step-outputs
+seclai sources exports list <sourceId> [--page N] [--limit N]
+seclai sources exports create <sourceId>
+seclai sources exports get <sourceId> <exportId>
+seclai sources exports cancel <sourceId> <exportId>
+seclai sources exports delete <sourceId> <exportId>
+seclai sources exports download <sourceId> <exportId>
+seclai sources exports estimate <sourceId>
 ```
 
-Cancel/delete a run:
+#### Embedding Migration
 
 ```bash
-seclai runs delete 3f1a2b4c-5d6e-4f70-8a9b-1c2d3e4f5a6b
+seclai sources migration get <sourceId>
+seclai sources migration start <sourceId>
+seclai sources migration cancel <sourceId>
 ```
 
 ### Contents
 
-Get content detail:
+```bash
+seclai contents get <contentVersionId> [--start N] [--end N]
+seclai contents delete <contentVersionId>
+seclai contents embeddings <contentVersionId> [--page N] [--limit N]
+```
+
+#### Upload / Replace
 
 ```bash
-seclai contents get a1b2c3d4-e5f6-4a7b-8c9d-0e1f2a3b4c5d
-seclai contents get a1b2c3d4-e5f6-4a7b-8c9d-0e1f2a3b4c5d --start 0 --end 5000
+seclai contents upload <contentVersionId> --file ./updated.pdf [--metadata '{}']
+seclai contents replace <contentVersionId> --file ./updated.pdf   # alias
+seclai contents replace-text <contentVersionId> --json '{"title":"Note","text":"Updated content"}'
 ```
 
-Delete a content version:
+### Knowledge Bases
 
 ```bash
-seclai contents delete a1b2c3d4-e5f6-4a7b-8c9d-0e1f2a3b4c5d
+seclai kb list [--page N] [--limit N] [--sort <field>] [--order asc|desc]
+seclai kb create --json '{"name":"Support KB"}'
+seclai kb get <kbId>
+seclai kb update <kbId> --json '{"name":"Renamed"}'
+seclai kb delete <kbId>
 ```
 
-List embeddings:
+### Memory Banks
 
 ```bash
-seclai contents embeddings a1b2c3d4-e5f6-4a7b-8c9d-0e1f2a3b4c5d
-seclai contents embeddings a1b2c3d4-e5f6-4a7b-8c9d-0e1f2a3b4c5d --page 1 --limit 20
+seclai memory list [--page N] [--limit N]
+seclai memory create --json '{"name":"Chat Memory","type":"conversation"}'
+seclai memory get <memoryBankId>
+seclai memory update <memoryBankId> --json '{"name":"Renamed"}'
+seclai memory delete <memoryBankId>
+seclai memory stats <memoryBankId>
+seclai memory agents <memoryBankId>
+seclai memory compact <memoryBankId>
+seclai memory delete-source <memoryBankId>
+seclai memory templates
+seclai memory test-compaction <memoryBankId> [--json '...']
+seclai memory test-compaction-standalone [--json '...']
 ```
 
-Replace a content version by uploading a new file (keeps the same content version ID):
+#### Memory AI Assistant
 
 ```bash
-seclai contents upload a1b2c3d4-e5f6-4a7b-8c9d-0e1f2a3b4c5d --file ./updated.pdf
-seclai contents upload a1b2c3d4-e5f6-4a7b-8c9d-0e1f2a3b4c5d --file ./updated.pdf --metadata '{"revision":2}'
-seclai contents replace a1b2c3d4-e5f6-4a7b-8c9d-0e1f2a3b4c5d --file ./updated.pdf  # alias
+seclai memory ai generate --user-input "Configure compaction"
+seclai memory ai last
+seclai memory ai accept <conversationId> --json '{"accepted":true}'
 ```
 
-## Development
+### Evaluations
+
+#### Criteria
+
+```bash
+seclai evals criteria list <agentId> [--page N] [--limit N]
+seclai evals criteria create <agentId> --json '{"name":"Quality"}'
+seclai evals criteria get <criteriaId>
+seclai evals criteria update <criteriaId> --json '{"name":"Renamed"}'
+seclai evals criteria delete <criteriaId>
+seclai evals criteria summary <criteriaId>
+```
+
+#### Results
+
+```bash
+seclai evals results list <criteriaId> [--page N] [--limit N]
+seclai evals results create <criteriaId> --json '{"run_id":"...","score":0.9}'
+```
+
+#### Agent-level
+
+```bash
+seclai evals compatible-runs <criteriaId> [--page N] [--limit N]
+seclai evals test-draft <agentId> --json '{"criteria":{...}}'
+seclai evals agent-results <agentId> [--page N] [--limit N]
+seclai evals agent-runs <agentId> [--page N] [--limit N]
+seclai evals non-manual-summary <agentId>
+```
+
+### Solutions
+
+```bash
+seclai solutions list [--page N] [--limit N]
+seclai solutions create --json '{"name":"My Solution"}'
+seclai solutions get <solutionId>
+seclai solutions update <solutionId> --json '{"name":"Renamed"}'
+seclai solutions delete <solutionId>
+```
+
+#### Link / Unlink Resources
+
+```bash
+seclai solutions link <solutionId> --agents '["id1","id2"]' --kb '["id3"]' --sources '["id4"]'
+seclai solutions unlink <solutionId> --agents '["id1"]'
+```
+
+#### Conversations
+
+```bash
+seclai solutions convos list <solutionId>
+seclai solutions convos add <solutionId> --json '{"user_input":"Add a source"}'
+seclai solutions convos mark <solutionId> <conversationId> --json '{"accepted":true}'
+```
+
+#### Solution AI Assistant
+
+```bash
+seclai solutions ai generate <solutionId> --user-input "Add a FAQ source"
+seclai solutions ai kb <solutionId> --user-input "Create a knowledge base"
+seclai solutions ai source <solutionId> --user-input "Create a file source"
+seclai solutions ai accept <solutionId> <conversationId>
+seclai solutions ai decline <solutionId> <conversationId>
+```
+
+### Governance
+
+```bash
+seclai governance ai generate --user-input "Create a content safety policy"
+seclai governance ai list
+seclai governance ai accept <conversationId>
+seclai governance ai decline <conversationId>
+```
+
+### Alerts
+
+```bash
+seclai alerts list [--page N] [--limit N] [--status open] [--severity high]
+seclai alerts get <alertId>
+seclai alerts status <alertId> --json '{"status":"resolved"}'
+seclai alerts comment <alertId> --json '{"comment":"Investigating"}'
+seclai alerts subscribe <alertId>
+seclai alerts unsubscribe <alertId>
+```
+
+#### Alert Configurations
+
+```bash
+seclai alerts configs list [--page N] [--limit N]
+seclai alerts configs create --json '{"name":"Critical Alerts","type":"email"}'
+seclai alerts configs get <configId>
+seclai alerts configs update <configId> --json '{"name":"Renamed"}'
+seclai alerts configs delete <configId>
+```
+
+#### Organization Alert Preferences
+
+```bash
+seclai alerts prefs list
+seclai alerts prefs update <organizationId> <alertType> --json '{"enabled":true}'
+```
+
+### Models
+
+#### Model Alerts
+
+```bash
+seclai models alerts list [--page N] [--limit N]
+seclai models alerts mark-read <alertId>
+seclai models alerts mark-all-read
+seclai models alerts unread-count
+```
+
+#### Recommendations
+
+```bash
+seclai models recommendations <modelId>
+```
+
+### Search
+
+```bash
+seclai search --query "deployment guide" [--limit N] [--entity-type agent|source|kb]
+```
+
+### AI Assistant
+
+Top-level AI assistant for multi-domain operations.
+
+```bash
+seclai ai feedback --json '{"conversation_id":"...","feedback":"helpful"}'
+seclai ai kb --user-input "Create a support knowledge base"
+seclai ai source --user-input "Create a documentation source"
+seclai ai solution --user-input "Build a customer support solution"
+seclai ai memory --user-input "Create a conversation memory bank"
+seclai ai memory-history
+seclai ai accept <conversationId> [--json '...']
+seclai ai decline <conversationId>
+seclai ai memory-accept <conversationId> [--json '...']
+```
+
+### Skills
+
+Install Seclai skill files for AI coding tools (Copilot, Claude Code, Cursor, Windsurf, Codex, Kiro, Cline, Roo Code, Gemini, Antigravity).
+
+```bash
+# Auto-detect tools from workspace directory structure
+seclai skills install
+
+# Target a specific tool
+seclai skills install --tool copilot
+seclai skills install --tool claude
+seclai skills install --tool cursor
+seclai skills install --tool kiro
+seclai skills install --tool cline
+
+# Install for all supported tools
+seclai skills install --tool all
+
+# Specify a custom directory
+seclai skills install --tool copilot --dir /path/to/project
+
+# Via npx (no install required)
+npx @seclai/cli skills install
+```
+
+Skills follow the [Agent Skills specification](https://agentskills.io/specification). Each tool gets a `seclai-cli/` directory containing a `SKILL.md` with YAML frontmatter and a `references/` subdirectory for progressive disclosure:
+
+| Tool | Directory |
+|---|---|
+| Copilot | `.github/copilot/seclai-cli/` |
+| Claude Code | `.claude/skills/seclai-cli/` |
+| Cursor | `.cursor/skills/seclai-cli/` |
+| Windsurf | `.windsurf/skills/seclai-cli/` |
+| Codex | `.codex/skills/seclai-cli/` |
+| Kiro | `.kiro/steering/seclai-cli/` |
+| Cline | `.clinerules/seclai-cli/` |
+| Roo Code | `.roo/rules/seclai-cli/` |
+| Gemini | `.gemini/seclai-cli/` |
+| Antigravity | `.antigravity/seclai-cli/` |
 
-### Base URL
+You can also install skills using the [skills CLI](https://github.com/vercel-labs/skills):
 
-Overriding the base URL is intended for development/staging.
+```bash
+npx skills add seclai/seclai-cli
+```
+
+### MCP Server
 
-Set `SECLAI_API_URL` to point at a different API host:
+Configure the [Seclai MCP server](https://github.com/seclai/seclai-mcp) for AI coding tools:
 
 ```bash
-export SECLAI_API_URL="https://example.invalid"
+# Auto-detect tools and write MCP config
+seclai mcp configure --key YOUR_API_KEY
+
+# Target a specific tool
+seclai mcp configure --key YOUR_API_KEY --target claude-code
+seclai mcp configure --key YOUR_API_KEY --target cursor
+seclai mcp configure --key YOUR_API_KEY --target claude-desktop
+seclai mcp configure --key YOUR_API_KEY --target windsurf
+
+# Configure all known targets
+seclai mcp configure --key YOUR_API_KEY --target all
+
+# Show the MCP config snippet (for manual setup)
+seclai mcp show
+seclai mcp show --key YOUR_API_KEY
 ```
 
-Or pass it per-invocation:
+| Target | Config File | Scope |
+|---|---|---|
+| claude-code | `.mcp.json` | Project |
+| cursor | `.cursor/mcp.json` | Project |
+| claude-desktop | `~/Library/Application Support/Claude/claude_desktop_config.json` | Global |
+| windsurf | `~/.codeium/windsurf/mcp_config.json` | Global |
+
+The command merges into existing config files — it won't overwrite other MCP servers.
+
+### Shell Completion
+
+Generate shell completion scripts for tab-completion of commands:
 
 ```bash
-SECLAI_API_URL="https://example.invalid" seclai sources list
+# Bash — add to ~/.bashrc
+eval "$(seclai completion bash)"
+
+# Zsh — add to ~/.zshrc
+eval "$(seclai completion zsh)"
+
+# Fish — save to completions directory
+seclai completion fish > ~/.config/fish/completions/seclai.fish
 ```
 
-This is intentionally environment-variable-only (there is no CLI flag for it).
+---
+
+## Development
 
 ### Install dependencies
 
@@ -163,6 +491,12 @@ npm run build
 npm run dev -- --help
 ```
 
+### Test
+
+```bash
+npm test
+```
+
 ### Test global install locally
 
 ```bash